ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf143h22
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1Q01769:PHOSP_PIRYV Phosphoprotein - Piry virus (PIRYV) 31 2.6

>Q01769:PHOSP_PIRYV Phosphoprotein - Piry virus (PIRYV)|
          Length = 327
 Score = 31.2 bits (69), Expect = 2.6
 Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
 Frame = +2

Query: 230 WITMAERARSGAVKAGMDVRESLSPKQKGDWQD--VALMSLS 349
           W  M ++  +G + A +   + L+PKQ   W D  +ALM LS
Sbjct: 110 WSAMVQKTVNGKLVAELSAPQGLTPKQLSQWTDSVLALMDLS 151


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 70,816,468
Number of extensions: 1207312
Number of successful extensions: 2233
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2233
Number of HSP's successfully gapped: 1
Length of query: 186
Length of database: 100,686,439
Length adjustment: 107
Effective length of query: 79
Effective length of database: 71,336,874
Effective search space: 5635613046
Effective search space used: 5635613046
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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