ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | FLbaf146b07 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK111779:Os10g0415900 | 672 | 0.0 | 2 | AK111374:Os01g0648700 | 44 | 3e-04 | 3 | AK102283:Os07g0507700 | 41 | 0.003 | 4 | AK073008:Os03g0130800 | 40 | 0.007 | 5 | AK073218:Os05g0376600 | 36 | 0.081 | 6 | AK119235:Os09g0550000 | 35 | 0.14 | 7 | AK067716:Os09g0550000 | 35 | 0.14 | 8 | AK110437: | 34 | 0.40 | 9 | Os01g0129600:Os01g0129600 | 32 | 1.2 | 10 | Os02g0250300:Os02g0250300 | 30 | 5.8 | 11 | Os04g0205200:Os04g0205200 | 30 | 7.6 | 12 | AK107461:Os01g0274800 | 26 | 7.9 | 13 | Os07g0585600:Os07g0585600 | 29 | 9.9 |
|---|
>AK111779:Os10g0415900 | Length = 511 Score = 672 bits (1734), Expect = 0.0 Identities = 330/384 (85%), Positives = 349/384 (90%), Gaps = 5/384 (1%) Frame = +1 Query: 484 EDSKGLFTDNIQTSGAYSAREEGLKREEDTGKLKFLCYSNDGVDEHMIWLVGLKNIFARQ 663 ED KGLFTDNIQTSGAYSAREEGLKREE+ G+LKFLCYSNDGVDEHMIWLVGLKNIFARQ Sbjct: 129 EDPKGLFTDNIQTSGAYSAREEGLKREEEAGRLKFLCYSNDGVDEHMIWLVGLKNIFARQ 188 Query: 664 LPNMPKEYIVRLVMDRTHKSMMVIRNNNVVGGITYRPYASQRFGEIAFCAITADEQVKGY 843 LPNMPKEYIVRLVMDRTHKSMMVIRNN VVGGITYRPY SQ+FGEIAFCAITADEQVKGY Sbjct: 189 LPNMPKEYIVRLVMDRTHKSMMVIRNNIVVGGITYRPYTSQKFGEIAFCAITADEQVKGY 248 Query: 844 GTRLMNHLKQHARDADGLTHFLTYADNNAVGYFVKQGFTKEITFDKERWQGYIKDYDGGI 1023 GTRLMNHLKQHARDADGLTHFLTYADNNAVGYFVKQGFTKEIT DKERWQGYIKDYDGGI Sbjct: 249 GTRLMNHLKQHARDADGLTHFLTYADNNAVGYFVKQGFTKEITLDKERWQGYIKDYDGGI 308 Query: 1024 LMECKIDQKLPYVDLATMIRRQRQ-----IRELSNCHIVYSGIDFQKKEAGIPRRLMKPE 1188 LMEC+IDQKLPYVDLATMIRRQRQ IRELSNCHIVYSGIDFQKKEAGIPRR MKPE Sbjct: 309 LMECRIDQKLPYVDLATMIRRQRQAIDEKIRELSNCHIVYSGIDFQKKEAGIPRRTMKPE 368 Query: 1189 DIPGLREAGWTPDQWGHSKSRSTFSSDYSTYRQQLTSLMRMLLKSLVDHADAWPFKEPVD 1368 DI GLREAGWTPDQWGHSKSRS FS DYSTYRQQLT+LMR LLK++ +H DAWPFKEPVD Sbjct: 369 DIQGLREAGWTPDQWGHSKSRSAFSPDYSTYRQQLTNLMRSLLKNMNEHPDAWPFKEPVD 428 Query: 1369 SRXXXXXXXXXXXXXXLKTMSRRVESEQYYVTLEMFVADLKRMFINARTYNSPDTIYFKC 1548 SR LKTMS+RVESEQYYVTLEMFVAD+KRMF NA+TYNSPDTIY+KC Sbjct: 429 SRDVPDYYDIIKDPIDLKTMSKRVESEQYYVTLEMFVADMKRMFSNAKTYNSPDTIYYKC 488 Query: 1549 STRLEAYFTNRIQSHLAQAASTKN 1620 ++RLE++F+N++ S LAQ ASTKN Sbjct: 489 ASRLESFFSNKVASQLAQ-ASTKN 511
>AK111374:Os01g0648700 | Length = 253 Score = 44.3 bits (103), Expect = 3e-04 Identities = 29/89 (32%), Positives = 41/89 (46%), Gaps = 2/89 (2%) Frame = +1 Query: 1312 LLKSLVDHADAWPFKEPVDSR--XXXXXXXXXXXXXXLKTMSRRVESEQYYVTLEMFVAD 1485 LL L++H D W F EPVD+R L T+ RR+E + Y F AD Sbjct: 74 LLDKLLEHEDGWVFAEPVDARALRLVDYYLRISDPMDLGTVRRRLERRR-YADPWAFAAD 132 Query: 1486 LKRMFINARTYNSPDTIYFKCSTRLEAYF 1572 ++ F NA +YNS ++ + L F Sbjct: 133 VRLTFNNAMSYNSAGDPVYESAAELSEIF 161
>AK102283:Os07g0507700 | Length = 484 Score = 40.8 bits (94), Expect = 0.003 Identities = 26/74 (35%), Positives = 34/74 (45%), Gaps = 2/74 (2%) Frame = +1 Query: 1312 LLKSLVDHADAWPFKEPVDS--RXXXXXXXXXXXXXXLKTMSRRVESEQYYVTLEMFVAD 1485 +LK L+DH W F PVD L T+ R++ S+QY E F AD Sbjct: 68 ILKKLMDHKSGWIFNTPVDPVVYGIPDYFDVIRNPMDLGTVKRKLTSKQYSNPYE-FAAD 126 Query: 1486 LKRMFINARTYNSP 1527 ++ F NA YN P Sbjct: 127 VRLTFSNAMKYNPP 140
>AK073008:Os03g0130800 | Length = 619 Score = 39.7 bits (91), Expect = 0.007 Identities = 22/72 (30%), Positives = 35/72 (48%) Frame = +1 Query: 1351 FKEPVDSRXXXXXXXXXXXXXXLKTMSRRVESEQYYVTLEMFVADLKRMFINARTYNSPD 1530 F EPVD T+ ++ ++ Y TLE F D+ + NA +YNS D Sbjct: 117 FSEPVDHEELPDYHEIIEHPMDFSTIREKLLNDSY-TTLEQFENDVFLLTSNAMSYNSDD 175 Query: 1531 TIYFKCSTRLEA 1566 T+Y++ + +EA Sbjct: 176 TVYYRQARSIEA 187
>AK073218:Os05g0376600 | Length = 612 Score = 36.2 bits (82), Expect = 0.081 Identities = 20/60 (33%), Positives = 30/60 (50%) Frame = +1 Query: 778 ASQRFGEIAFCAITADEQVKGYGTRLMNHLKQHARDADGLTHFLTYADNNAVGYFVKQGF 957 A ++ EI + Q G G L L Q R+ G+T +ADN + G+++KQGF Sbjct: 155 ADTQYAEIPLAVVRPPYQRVGIGQLLYKELSQRLRNV-GVTTIFCWADNVSEGFWLKQGF 213
>AK119235:Os09g0550000 | Length = 567 Score = 35.4 bits (80), Expect = 0.14 Identities = 20/65 (30%), Positives = 31/65 (47%) Frame = +1 Query: 1351 FKEPVDSRXXXXXXXXXXXXXXLKTMSRRVESEQYYVTLEMFVADLKRMFINARTYNSPD 1530 F +PVD T+ +++ ++ Y LE F D+ + NA YNSPD Sbjct: 138 FSDPVDPEELPDYHDIIKHPMDFSTIRKKL-NKGAYGNLEQFEDDVFLLTSNAMCYNSPD 196 Query: 1531 TIYFK 1545 TIY++ Sbjct: 197 TIYYR 201
>AK067716:Os09g0550000 | Length = 567 Score = 35.4 bits (80), Expect = 0.14 Identities = 20/65 (30%), Positives = 31/65 (47%) Frame = +1 Query: 1351 FKEPVDSRXXXXXXXXXXXXXXLKTMSRRVESEQYYVTLEMFVADLKRMFINARTYNSPD 1530 F +PVD T+ +++ ++ Y LE F D+ + NA YNSPD Sbjct: 138 FSDPVDPEELPDYHDIIKHPMDFSTIRKKL-NKGAYGNLEQFEDDVFLLTSNAMCYNSPD 196 Query: 1531 TIYFK 1545 TIY++ Sbjct: 197 TIYYR 201
>AK110437: | Length = 434 Score = 33.9 bits (76), Expect = 0.40 Identities = 21/66 (31%), Positives = 36/66 (54%), Gaps = 2/66 (3%) Frame = +1 Query: 1333 HADAWPFKEPVD--SRXXXXXXXXXXXXXXLKTMSRRVESEQYYVTLEMFVADLKRMFIN 1506 H A+PF +PVD + L T+ +R+ ++ YY T+E F AD++ ++ N Sbjct: 3 HKWAFPFNQPVDYVALNLPTYPQVIKQPMDLGTVKQRL-ADNYYETVEAFDADVQLVWHN 61 Query: 1507 ARTYNS 1524 A T+N+ Sbjct: 62 AMTFNA 67
>Os01g0129600:Os01g0129600 | Length = 307 Score = 32.3 bits (72), Expect = 1.2 Identities = 21/57 (36%), Positives = 26/57 (45%), Gaps = 8/57 (14%) Frame = +3 Query: 453 CRVRGVWRREGGLQGAVHGQYPDQWRL--------QRPGGGSQA*GRYREAEISLLF 599 C +R V R G + GA G D RL +RPGGG+ A R A L+F Sbjct: 125 CDIRHVGARRGDVHGAAAGPVADLHRLDISSRAKFKRPGGGAAAAHRSDHAAFELVF 181
>Os02g0250300:Os02g0250300 | Length = 656 Score = 30.0 bits (66), Expect = 5.8 Identities = 23/72 (31%), Positives = 30/72 (41%), Gaps = 2/72 (2%) Frame = +1 Query: 1312 LLKSLVDHADAWPFKEPVD--SRXXXXXXXXXXXXXXLKTMSRRVESEQYYVTLEMFVAD 1485 LL L+ H W F +PVD + L T+ R+ QY E F D Sbjct: 322 LLSRLMKHKFGWVFNKPVDAVALGLHDYFAIIKHPMDLGTIKTRLTHGQYRNPRE-FADD 380 Query: 1486 LKRMFINARTYN 1521 ++ F NA TYN Sbjct: 381 VRLTFHNAMTYN 392
>Os04g0205200:Os04g0205200 | Length = 1194 Score = 29.6 bits (65), Expect = 7.6 Identities = 21/75 (28%), Positives = 35/75 (46%), Gaps = 1/75 (1%) Frame = +1 Query: 1039 IDQKLPYVDLATMIRRQRQIRELSNCHIVYSGI-DFQKKEAGIPRRLMKPEDIPGLREAG 1215 +DQ + ++L + ++ E+SN +I YS I D K A +PR L G G Sbjct: 139 LDQAVAEIELL-----KARVEEVSNRNIRYSLINDSGSKPAAMPRHLASAASAVGTSAVG 193 Query: 1216 WTPDQWGHSKSRSTF 1260 + W ++K + F Sbjct: 194 VLTEAWCNAKKQPGF 208
>AK107461:Os01g0274800 | Length = 205 Score = 25.8 bits (55), Expect(2) = 7.9 Identities = 12/24 (50%), Positives = 12/24 (50%) Frame = +2 Query: 476 TGRRTPRGCSRTISRPVAPTAPGR 547 TGR G S S P APT P R Sbjct: 27 TGRTATSGRSSPASSPAAPTTPSR 50 Score = 22.3 bits (46), Expect(2) = 7.9 Identities = 10/20 (50%), Positives = 10/20 (50%) Frame = +3 Query: 426 GHNGGSQARCRVRGVWRREG 485 G GG R R G WRR G Sbjct: 9 GLTGGRSRRRRRSGSWRRTG 28
>Os07g0585600:Os07g0585600 | Length = 597 Score = 29.3 bits (64), Expect = 9.9 Identities = 19/82 (23%), Positives = 41/82 (50%), Gaps = 5/82 (6%) Frame = +1 Query: 727 MVIRNNNVVGGITYRPYASQRFGEIAFCAITADEQVKGYGTRLMNH-----LKQHARDAD 891 +V R+ +++G P+ + GE+A A++ + + +G G +L+++ + A + Sbjct: 473 VVERDGSIIGCAALFPFPEDKSGEVAAIAVSEECRGRGQGDKLLDYDDASDYIEKAAMSL 532 Query: 892 GLTHFLTYADNNAVGYFVKQGF 957 GL A +FV++GF Sbjct: 533 GLEKLFLLTTRTA-DWFVRRGF 553 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 45,085,735 Number of extensions: 968878 Number of successful extensions: 2483 Number of sequences better than 10.0: 13 Number of HSP's gapped: 2482 Number of HSP's successfully gapped: 14 Length of query: 622 Length of database: 15,399,855 Length adjustment: 107 Effective length of query: 515 Effective length of database: 11,115,468 Effective search space: 5724466020 Effective search space used: 5724466020 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
