ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf145m20 |
|---|---|
| Clone Library Name | barley_pub |
>LOC_Os01g40690:12001.t03592:unspliced-genomic holocarboxylase synthetase, putative, expressed| Length = 2310 Score = 225 bits (485), Expect(5) = 6e-98 Identities = 94/125 (75%), Positives = 100/125 (80%) Frame = +2 / +2 Query: 371 QHEIDYGGTDAHVSPRVHQHPMTVNPFTSIQPSAGLYAQATSGHAPRPSLNDQSKNTIFS 550 QHE+DYGG D HVSPRVHQH +SIQPSAG Y QAT G APRPS++DQSKNTIFS Sbjct: 1571 QHELDYGGNDPHVSPRVHQHSANPFANSSIQPSAGSYGQATVGFAPRPSISDQSKNTIFS 1750 Query: 551 NALSSPVRRSLQTYHLTQGAGNGGRNTEANSAAQNREANSPSSNDTSMDMVSDITGNGYY 730 NALSSPVRRSLQ+YHLTQG+GNGGRN E NSA QNRE NS SNDTSMDMVSD GN YY Sbjct: 1751 NALSSPVRRSLQSYHLTQGSGNGGRNAETNSAGQNRETNSGGSNDTSMDMVSDSAGNEYY 1930 Query: 731 *VSSW 745 * W Sbjct: 1931 *SGLW 1945 Score = 91.3 bits (193), Expect(5) = 6e-98 Identities = 38/44 (86%), Positives = 42/44 (95%) Frame = +2 / +2 Query: 161 PRLDEADRTLYSSFCGAANSLSLLYSQAIAQQKLSFQAGERQAL 292 PRLDEADRTLYS+FCGAANSLS LY+QA+AQQKLSFQAGER +L Sbjct: 182 PRLDEADRTLYSTFCGAANSLSQLYTQAMAQQKLSFQAGERHSL 313 Score = 64.3 bits (134), Expect(5) = 6e-98 Identities = 25/27 (92%), Positives = 26/27 (96%) Frame = +2 / +3 Query: 293 EKLHQWILRKHDEESRLTVADIMSHIQ 373 EKLHQWILRKH+EESRLT ADIMSHIQ Sbjct: 1050 EKLHQWILRKHEEESRLTAADIMSHIQ 1130 Score = 40.5 bits (82), Expect(5) = 6e-98 Identities = 19/58 (32%), Positives = 25/58 (43%) Frame = +2 / +3 Query: 725 YY*VSSWKHVACTTRKHRVPVFSLVLYVICIFPKAHALCGFIVAHLAIHLKLLDLFCF 898 YY* W AC TR+ ++CIF K + LCG +V + K L F Sbjct: 1986 YY*TGLW*DAACKTRQQHNTSVVSCCCMLCIFLKPYHLCGLVVTDEMVLFKAFKLLYF 2159 Score = 26.3 bits (51), Expect(5) = 6e-98 Identities = 9/12 (75%), Positives = 10/12 (83%) Frame = +1 / +2 Query: 973 FTMKILNVTENC 1008 F +KILNV ENC Sbjct: 2246 FVLKILNVNENC 2281 Score = 141 bits (302), Expect(8) = 2e-63 Identities = 65/92 (70%), Positives = 69/92 (75%) Frame = -2 / -1 Query: 729 *YPFPVMSETMSMEVSLELGELASRFCAAEFASVFRPPLPAPWVK**VWRLLRTGLDNAF 550 *Y P +SETMS+EVSLE EL S FC AEF S FRPPLP PWVK**+ RL RTGLD AF Sbjct: 1929 *YSLPALSETMSIEVSLEPPELVSLFCPAEFVSAFRPPLPDPWVK**L*RLRRTGLDKAF 1750 Query: 549 ENIVFFDWSLRLGLGACPDVACAYNPAEGWIL 454 E IVFFD SL LGLGA P VA PAEGW+L Sbjct: 1749 EKIVFFD*SLMLGLGANPTVA*P*EPAEGWML 1654 Score = 59.3 bits (123), Expect(8) = 2e-63 Identities = 28/45 (62%), Positives = 30/45 (66%) Frame = -2 / -1 Query: 294 SRACRSPAWKESFCWAMXXXXXXXXXXXAPQKEE*SVRSASSNLG 160 +R RSPAWKESFCWAM APQK E*SVRSASS+ G Sbjct: 315 TREWRSPAWKESFCWAMAWV*SWERELAAPQKVE*SVRSASSSRG 181 Score = 41.4 bits (84), Expect(8) = 2e-63 Identities = 15/19 (78%), Positives = 17/19 (89%) Frame = -2 / -1 Query: 429 C*CTLGDTCASVPP*SISC 373 C*CTLG+TC S+PP*S SC Sbjct: 1629 C*CTLGETCGSLPP*SNSC 1573 Score = 36.3 bits (73), Expect(8) = 2e-63 Identities = 15/26 (57%), Positives = 18/26 (69%) Frame = -1 / -2 Query: 379 LMLDM*HYVRNSKPRLLIMLPQDPLV 302 L LDM HY+ +PRL +ML Q PLV Sbjct: 1136 LNLDMRHYISRREPRLFLMLSQYPLV 1059 Score = 31.3 bits (62), Expect(8) = 2e-63 Identities = 13/34 (38%), Positives = 19/34 (55%) Frame = -3 / -1 Query: 821 GKYI*HTKPEKILVLDASWLCMQHVSMN*LSSTH 720 GKYI ++ + A+W CMQH++ SS H Sbjct: 2082 GKYITYSNRRQHWYCVAAWFCMQHLTTIQFSSIH 1981 Score = 29.0 bits (57), Expect(8) = 2e-63 Identities = 11/29 (37%), Positives = 18/29 (62%) Frame = -1 / -2 Query: 898 KTKQIQQF*VNRQVCNYKATQCMSFRENT 812 K ++++ N +C+YKA Q + F ENT Sbjct: 2159 KIQKLKSLKENHFICDYKAAQMIRF*ENT 2073 Score = 24.9 bits (48), Expect(8) = 2e-63 Identities = 10/13 (76%), Positives = 10/13 (76%) Frame = -1 / -3 Query: 169 QPRCCVRLPLSGH 131 QPR VRLPL GH Sbjct: 190 QPRRRVRLPLPGH 152 Score = 22.1 bits (42), Expect(8) = 2e-63 Identities = 9/17 (52%), Positives = 12/17 (70%) Frame = -3 / -1 Query: 1016 IS*QFSVTFRIFMVKQQ 966 I+ QFS TF+IF K + Sbjct: 2289 ITMQFSFTFKIFNTKSR 2239 Score = 135 bits (290), Expect(4) = 5e-44 Identities = 65/121 (53%), Positives = 80/121 (66%) Frame = +3 / +3 Query: 372 SMRLTMEVLMHMYPQGYISIP*L*IRLQVSNPQLGCTHKQHLGMLPDPASMTSQRIRYSQ 551 SM MEV++HM+P YISI + ++ Q SNPQL KQ + DPAS+ SQRI++SQ Sbjct: 1572 SMSWIMEVMIHMFPPEYISIVQIRLQTQASNPQLVPMVKQQ*DLRLDPASVISQRIQFSQ 1751 Query: 552 MHYQARSAGASRPIT*PKVLVMEDGTLKQTQPRKTERLILQAPMTPPWTWFQTSREMGTT 731 M YQARS GA R I *PK LVME G KQT + R L+APMTP WTWF+T+ TT Sbjct: 1752 MLYQARSVGAFRAII*PKDLVMEAGMQKQTLQDRIGRPTLEAPMTPQWTWFRTALVTNTT 1931 Query: 732 K 734 + Sbjct: 1932 E 1934 Score = 40.0 bits (81), Expect(4) = 5e-44 Identities = 21/45 (46%), Positives = 25/45 (55%) Frame = +3 / +1 Query: 717 EMGTTKSVHGNMLHAQPGSIEYQYFLWFCMLYVFSLKLMHCVAL* 851 EM TT+ G MLHA+PGS + YVFS L+ C AL* Sbjct: 1978 EMNTTELDCGEMLHAKPGSNTIPVLSPVAVCYVFS*NLIICAAL* 2112 Score = 36.8 bits (74), Expect(4) = 5e-44 Identities = 15/18 (83%), Positives = 15/18 (83%) Frame = +1 / +1 Query: 241 GHRPAEALLPGRRAAGPR 294 GH PAEALLPGRRA PR Sbjct: 262 GHGPAEALLPGRRAPLPR 315 Score = 32.7 bits (65), Expect(4) = 5e-44 Identities = 14/26 (53%), Positives = 20/26 (76%) Frame = +1 / +2 Query: 295 KAPPMDLEEA**GVEAYCCGHNVTYP 372 K PP+D+E+A* VEA+ +NV+YP Sbjct: 1052 KTPPVDIEKA*GRVEAHGG*YNVSYP 1129 Score = 101 bits (215), Expect(5) = 9e-39 Identities = 52/96 (54%), Positives = 65/96 (67%) Frame = -1 / -3 Query: 745 P*TDLVVPISRDV*NHVHGGVIGAWRISLSVLRG*VCFSVPSSITSTLGQVIGLEAPADR 566 P + VV ++ V NHVH GVIGA R+ L +L VCF +P+SIT +LG +I L+AP DR Sbjct: 1945 PQSTSVVFVTSAVRNHVH*GVIGASRVGLPILSCRVCFCIPASITRSLG*MIALKAPTDR 1766 Query: 565 A**CI*EYRIL*LVIEAGSGSMPRCCLCVQPS*GLD 458 A** I*E IL*L+ +AGS CCL + S*GLD Sbjct: 1765 A**SI*ENCIL*LITDAGSRRKSYCCLTIGTS*GLD 1658 Score = 63.4 bits (132), Expect(5) = 9e-39 Identities = 25/39 (64%), Positives = 29/39 (74%) Frame = -2 / -3 Query: 372 WICDIMSATVSLDSSSCFLKIHWWSFSRACRSPAWKESF 256 WI DI+SA VSLDSSSCFL IHWWSFS ++ K +F Sbjct: 1129 WI*DIISAAVSLDSSSCFLNIHWWSFSCTIKNEINKSTF 1013 Score = 28.6 bits (56), Expect(5) = 9e-39 Identities = 13/20 (65%), Positives = 14/20 (70%) Frame = -1 / -3 Query: 430 MLMYPWGYMCISTSIVNLML 371 MLMY G M I TSI+ LML Sbjct: 1630 MLMYSGGNMWIITSIIQLML 1571 Score = 27.2 bits (53), Expect(5) = 9e-39 Identities = 15/43 (34%), Positives = 18/43 (41%) Frame = -2 / -3 Query: 852 TIKPHSA*ALGKIHITYKTRENTGTRCFLVVHATCFHELT**Y 724 T +PH * KIH + C LV+HA H *Y Sbjct: 2113 TTRPHR**GFRKIHNIQQQETTLVLCCCLVLHAASHHNPVQ*Y 1985 Score = 25.8 bits (50), Expect(5) = 9e-39 Identities = 7/11 (63%), Positives = 9/11 (81%) Frame = -3 / -2 Query: 245 WPESRAGKGNW 213 WP RAG+G+W Sbjct: 266 WPGCRAGRGSW 234 Score = 92.3 bits (195), Expect(3) = 8e-26 Identities = 51/100 (51%), Positives = 56/100 (56%) Frame = -3 / -2 Query: 641 SLLQCSVLHYQHLGSSDRSGGSCGPGLIMHLRISYSLTGH*GWVWEHAQMLLVRTTQLRV 462 SL S LHYQ LG +D S GS GPGLI HLR YSLT H* WV +LL QLRV Sbjct: 1841 SLFLHSGLHYQILGLNDSSEGSDGPGLIKHLRKLYSLTDH*CWV*AQILLLLDHRNQLRV 1662 Query: 461 GYL*TDSQSWDADVPLGIHVHQYLHSQSHAGYVTLCPQQ* 342 G L + ADV G HV YLH+ +HA C Q* Sbjct: 1661 GCLSLQTDLHYADVLWGKHVDHYLHNPTHAVKDEKCVYQ* 1542 Score = 40.0 bits (81), Expect(3) = 8e-26 Identities = 13/22 (59%), Positives = 16/22 (72%) Frame = -3 / -2 Query: 731 SSTHFP*CLKPCPWRCHWSLEN 666 SS + C KPCP RCHWSL++ Sbjct: 1931 SSIRYQRCPKPCPLRCHWSLQS 1866 Score = 23.1 bits (44), Expect(3) = 8e-26 Identities = 10/20 (50%), Positives = 14/20 (70%) Frame = -1 / -2 Query: 775 MLPGCACNMFP*TDLVVPIS 716 +LPG AC++ P + VV IS Sbjct: 2036 LLPGFACSISPQSSSVVFIS 1977 Score = 111 bits (237), Expect(2) = 2e-25 Identities = 49/90 (54%), Positives = 59/90 (65%) Frame = +1 / +1 Query: 385 LWRY*CTCIPKGTSASHDCESVYKYPTLSWVVRTSNIWACSQTQPQ*PVKEYDILKCIIK 564 LWR * TC P+ TSA K+PTLSW + +SN C+ TQ Q* VKEY+ LKC IK Sbjct: 1585 LWR**STCFPQSTSA*CKSVCKLKHPTLSWFLWSSNSRICA*TQHQ*SVKEYNFLKCFIK 1764 Query: 565 PGPQEPPDLSLDPRCW*WRTEH*SKLSRAK 654 PGP EP +LS +PR W*WR E +KL R + Sbjct: 1765 PGPSEPSELSFNPRIW*WRPECRNKLCRTE 1854 Score = 29.5 bits (58), Expect(2) = 2e-25 Identities = 12/33 (36%), Positives = 17/33 (51%) Frame = +1 / +2 Query: 724 VLLSQFMETCCMHNQEASSTSIFSGFVCYMYFP 822 +LL+ + CCM NQ A+ + MYFP Sbjct: 1985 ILLNWIVVRCCMQNQAATQYQCCLLLLYVMYFP 2083
>LOC_Os09g19640:12009.t01699:unspliced-genomic holocarboxylase synthetase, putative, expressed| Length = 4914 Score = 67.0 bits (140), Expect(4) = 1e-27 Identities = 29/43 (67%), Positives = 34/43 (79%) Frame = +2 / +1 Query: 164 RLDEADRTLYSSFCGAANSLSLLYSQAIAQQKLSFQAGERQAL 292 RL+E DR LY +F GAANSLS LY+ A+ QKLSFQAGER A+ Sbjct: 223 RLEETDRALYGAFRGAANSLSQLYTLAMGGQKLSFQAGERHAM 351 Score = 49.2 bits (101), Expect(4) = 1e-27 Identities = 19/27 (70%), Positives = 23/27 (85%) Frame = +2 / +3 Query: 293 EKLHQWILRKHDEESRLTVADIMSHIQ 373 EKL++WILR+H+ RLTVADI SHIQ Sbjct: 2628 EKLYEWILRQHENGLRLTVADIASHIQ 2708 Score = 48.3 bits (99), Expect(4) = 1e-27 Identities = 23/53 (43%), Positives = 28/53 (52%) Frame = +2 / +3 Query: 518 LNDQSKNTIFSNALSSPVRRSLQTYHLTQGAGNGGRNTEANSAAQNREANSPS 676 L + +FSNALSSPVRRSLQ +HL QG G N + +N S Sbjct: 4332 LVQSKNSAVFSNALSSPVRRSLQPFHLEQGGDAGYFANGVNRDQNSTASNDSS 4490 Score = 28.1 bits (55), Expect(4) = 1e-27 Identities = 10/15 (66%), Positives = 11/15 (73%) Frame = +2 / +3 Query: 374 HEIDYGGTDAHVSPR 418 HEI YGG +A SPR Sbjct: 4188 HEIQYGGDNASASPR 4232 Score = 41.4 bits (84), Expect(4) = 1e-06 Identities = 17/30 (56%), Positives = 21/30 (70%) Frame = -2 / -3 Query: 381 ISCWICDIMSATVSLDSSSCFLKIHWWSFS 292 + W+C+ +SATVSL SC LKIH SFS Sbjct: 2716 LQTWMCEAISATVSLKPFSCCLKIHS*SFS 2627 Score = 27.2 bits (53), Expect(4) = 1e-06 Identities = 10/11 (90%), Positives = 10/11 (90%) Frame = -2 / -2 Query: 288 ACRSPAWKESF 256 A RSPAWKESF Sbjct: 347 AWRSPAWKESF 315 Score = 26.3 bits (51), Expect(4) = 1e-06 Identities = 11/17 (64%), Positives = 12/17 (70%) Frame = -2 / -3 Query: 582 RLLRTGLDNAFENIVFF 532 RL RTGLD+AFE F Sbjct: 4396 RLRRTGLDSAFEKTAEF 4346 Score = 24.0 bits (46), Expect(4) = 1e-06 Identities = 8/15 (53%), Positives = 9/15 (60%) Frame = -3 / -1 Query: 734 LSSTHFP*CLKPCPW 690 LS +H CL CPW Sbjct: 4533 LSKSHELGCLNACPW 4489 Score = 36.3 bits (73), Expect(2) = 0.13 Identities = 16/28 (57%), Positives = 20/28 (71%) Frame = +2 / +3 Query: 653 NREANSPSSNDTSMDMVSDITGNGYY*V 736 NR+ NS +SND+SMDM SD + Y*V Sbjct: 4452 NRDQNSTASNDSSMDMHSDSPAHDSY*V 4535 Score = 24.4 bits (47), Expect(2) = 0.13 Identities = 10/13 (76%), Positives = 10/13 (76%) Frame = +1 / +3 Query: 244 HRPAEALLPGRRA 282 H EALLPGRRA Sbjct: 303 HGRPEALLPGRRA 341 Score = 34.1 bits (68), Expect(2) = 0.43 Identities = 12/32 (37%), Positives = 20/32 (62%) Frame = -1 / -2 Query: 397 STSIVNLMLDM*HYVRNSKPRLLIMLPQDPLV 302 S ++ LD+ Y+ N +P+ + MLPQDP + Sbjct: 2732 SWRMITANLDVRGYISNCQPQAIFMLPQDPFI 2637 Score = 24.9 bits (48), Expect(2) = 0.43 Identities = 14/24 (58%), Positives = 18/24 (75%) Frame = -1 / -2 Query: 610 STLGQVIGLEAPADRA**CI*EYR 539 +TL QV L+APA+ A *CI*+ R Sbjct: 4424 ATLLQVEWLQAPANGAR*CI*KDR 4353
>LOC_Os08g30730:12008.t02824:unspliced-genomic holocarboxylase synthetase, putative, expressed| Length = 4294 Score = 62.5 bits (130), Expect(4) = 2e-23 Identities = 28/41 (68%), Positives = 32/41 (78%) Frame = +2 / +1 Query: 170 DEADRTLYSSFCGAANSLSLLYSQAIAQQKLSFQAGERQAL 292 +EADR LY +F GAANSLS LY+ A A Q+LSF AGER AL Sbjct: 226 EEADRALYGAFRGAANSLSQLYALAGAHQRLSFHAGERHAL 348 Score = 46.4 bits (95), Expect(4) = 2e-23 Identities = 18/30 (60%), Positives = 25/30 (83%) Frame = +2 / +2 Query: 293 EKLHQWILRKHDEESRLTVADIMSHIQHEI 382 EKL+QW++R+H+ RLTV+DI SHIQ +I Sbjct: 1922 EKLYQWMVRQHEIGLRLTVSDIASHIQVQI 2011 Score = 40.5 bits (82), Expect(4) = 2e-23 Identities = 17/33 (51%), Positives = 21/33 (63%) Frame = +2 / +2 Query: 521 NDQSKNTIFSNALSSPVRRSLQTYHLTQGAGNG 619 N + IFS ALSSPVR++LQ YH+ Q G Sbjct: 2336 NPSKDSMIFSKALSSPVRQNLQLYHVQQCGDTG 2434 Score = 28.1 bits (55), Expect(4) = 2e-23 Identities = 10/15 (66%), Positives = 12/15 (80%) Frame = +2 / +2 Query: 374 HEIDYGGTDAHVSPR 418 HEI+YGG +A SPR Sbjct: 2201 HEIEYGGDNALTSPR 2245 Score = 37.7 bits (76), Expect(4) = 4e-08 Identities = 16/27 (59%), Positives = 17/27 (62%) Frame = -2 / -2 Query: 372 WICDIMSATVSLDSSSCFLKIHWWSFS 292 W+ D MS TVSL SC IHW SFS Sbjct: 2001 WMWDAMSDTVSLKPISCCRTIHW*SFS 1921 Score = 29.9 bits (59), Expect(4) = 4e-08 Identities = 11/15 (73%), Positives = 13/15 (86%) Frame = -2 / -2 Query: 582 RLLRTGLDNAFENIV 538 R RTGLD+AFENI+ Sbjct: 2397 RFCRTGLDSAFENII 2353 Score = 28.1 bits (55), Expect(4) = 4e-08 Identities = 10/16 (62%), Positives = 12/16 (75%) Frame = -2 / -3 Query: 294 SRACRSPAWKESFCWA 247 ++A RSPAWKE WA Sbjct: 350 TKAWRSPAWKERRWWA 303 Score = 27.6 bits (54), Expect(4) = 4e-08 Identities = 11/19 (57%), Positives = 13/19 (68%) Frame = -2 / -2 Query: 423 CTLGDTCASVPP*SISCWI 367 C LG+ A PP SISC+I Sbjct: 2250 CDLGEVNALSPPYSISCYI 2194
>LOC_Os01g08690:12001.t00747:unspliced-genomic holocarboxylase synthetase, putative, expressed| Length = 2286 Score = 50.1 bits (103), Expect(2) = 7e-08 Identities = 20/39 (51%), Positives = 31/39 (79%) Frame = +2 / +3 Query: 176 ADRTLYSSFCGAANSLSLLYSQAIAQQKLSFQAGERQAL 292 A+ ++ +F GAAN+LS +Y QA+A Q+ SF+AGER+A+ Sbjct: 150 AEEEMHLAFRGAANALSQVYGQAVAAQEKSFRAGERRAM 266 Score = 31.3 bits (62), Expect(2) = 7e-08 Identities = 10/27 (37%), Positives = 19/27 (70%) Frame = +2 / +1 Query: 293 EKLHQWILRKHDEESRLTVADIMSHIQ 373 E +++WI KH E ++VAD+++ +Q Sbjct: 679 ENVYRWICSKHQEGLEVSVADLVAFLQ 759
>LOC_Os04g56790:12004.t05147:unspliced-genomic TLD family protein, expressed| Length = 3828 Score = 38.2 bits (77), Expect = 0.10 Identities = 18/50 (36%), Positives = 23/50 (46%) Frame = +2 / -3 Query: 746 KHVACTTRKHRVPVFSLVLYVICIFPKAHALCGFIVAHLAIHLKLLDLFC 895 KH T+ + P + + Y IC+ K H LC L H KLL L C Sbjct: 1126 KHGKITSIEDPPPFCTYLKYAICLVLKIHVLCKTKAMQLTFHSKLLTLQC 977
>LOC_Os12g23100:12012.t02044:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 4486 Score = 37.7 bits (76), Expect = 0.14 Identities = 15/42 (35%), Positives = 24/42 (57%) Frame = +2 / -2 Query: 431 PMTVNPFTSIQPSAGLYAQATSGHAPRPSLNDQSKNTIFSNA 556 P +V PF + S G + +A APRP N+Q +N F+++ Sbjct: 369 PTSVAPFLGLATSRGRHTRAPPTKAPRPRSNEQDQNAEFNSS 244
>LOC_Os04g04254:12004.t00313:unspliced-genomic sterol 3-beta-glucosyltransferase, putative, expressed| Length = 12311 Score = 35.4 bits (71), Expect = 0.68 Identities = 15/27 (55%), Positives = 18/27 (66%) Frame = +3 / -3 Query: 492 HLGMLPDPASMTSQRIRYSQMHYQARS 572 HLGMLPD S +S I S + YQA+S Sbjct: 6213 HLGMLPDATSASSS*IHLSYLGYQAKS 6133
>LOC_Os04g04240:12004.t00312:unspliced-genomic sterol 3-beta-glucosyltransferase, putative| Length = 7137 Score = 35.4 bits (71), Expect = 0.68 Identities = 15/27 (55%), Positives = 18/27 (66%) Frame = +3 / -3 Query: 492 HLGMLPDPASMTSQRIRYSQMHYQARS 572 HLGMLPD S +S I S + YQA+S Sbjct: 1375 HLGMLPDATSASSS*IHLSYLGYQAKS 1295
>LOC_Os08g15690:12008.t01443:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 1579 Score = 35.4 bits (71), Expect = 0.69 Identities = 13/33 (39%), Positives = 15/33 (45%) Frame = +1 / -1 Query: 400 CTCIPKGTSASHDCESVYKYPTLSWVVRTSNIW 498 CTC P T KY T +WV+ SN W Sbjct: 1297 CTCSPSSTVWERSSNLFSKYTTFTWVIFQSNKW 1199
>LOC_Os08g12140:12008.t01094:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 7222 Score = 35.0 bits (70), Expect = 0.94 Identities = 15/45 (33%), Positives = 21/45 (46%) Frame = +1 / +3 Query: 859 PGDSLKIVGFVLFFSSLFGEKSMCMPGSCLISQQSFCCFTMKILN 993 PGD L ++G FF G + SCL ++ CF + LN Sbjct: 4572 PGDRLCVLGLPRFFRLTSGVRMSTAQPSCLFQASAYTCFIVAKLN 4706
>LOC_Os09g06499:12009.t00446:unspliced-genomic sulfate transporter 4.1, chloroplast precursor, putative, expressed| Length = 18987 Score = 31.3 bits (62), Expect(2) = 1.0 Identities = 15/43 (34%), Positives = 22/43 (51%) Frame = +1 / -3 Query: 772 ASSTSIFSGFVCYMYFP*SSCTVWLYSCTPGDSLKIVGFVLFF 900 AS TS+F + + YF S T+ L S +P + L + FF Sbjct: 7330 ASPTSVFFSLLYFFYFSFSFLTIILSSSSPSNLLSFLFLFSFF 7202 Score = 28.1 bits (55), Expect(2) = 1.0 Identities = 8/18 (44%), Positives = 13/18 (72%) Frame = +1 / -2 Query: 733 SQFMETCCMHNQEASSTS 786 S+F++ CC HN + +TS Sbjct: 8147 SKFLQYCCTHNSQRKATS 8094
>LOC_Os03g51650:12003.t04491:unspliced-genomic expressed protein| Length = 5305 Score = 34.5 bits (69), Expect = 1.3 Identities = 14/28 (50%), Positives = 16/28 (57%) Frame = -3 / +2 Query: 107 PLRTRSHRGEERGRGFDAIFFFYGWAVC 24 PLR R R RG G FFF+G+ VC Sbjct: 47 PLRPRIFRRRRRGAGVVECFFFFGFFVC 130
>LOC_Os03g61660:12003.t05396:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 4059 Score = 34.5 bits (69), Expect = 1.3 Identities = 13/33 (39%), Positives = 15/33 (45%) Frame = +1 / -1 Query: 400 CTCIPKGTSASHDCESVYKYPTLSWVVRTSNIW 498 CTC P T + KY T +WV SN W Sbjct: 1545 CTCSPSSTVGKRSPDLFSKYTTFTWVRLESNKW 1447
>LOC_Os02g10660:12002.t00914:unspliced-genomic glucan endo-1,3-beta-glucosidase 7 precursor, putative, expressed| Length = 2909 Score = 34.5 bits (69), Expect = 1.3 Identities = 19/50 (38%), Positives = 25/50 (50%) Frame = +2 / +2 Query: 431 PMTVNPFTSIQPSAGLYAQATSGHAPRPSLNDQSKNTIFSNALSSPVRRS 580 P T P +S PSA + A + +PRPS S +T S +SP R S Sbjct: 893 PTTPPPASSASPSATRSSAAPTPASPRPSSAPSSTSTTRSRCSASPPRSS 1042
>LOC_Os08g02110:12008.t00108:unspliced-genomic peroxidase 47 precursor, putative, expressed| Length = 1425 Score = 28.1 bits (55), Expect(2) = 1.5 Identities = 10/21 (47%), Positives = 14/21 (66%) Frame = +1 / -2 Query: 391 RY*CTCIPKGTSASHDCESVY 453 +Y CTCI TS HDC +++ Sbjct: 1388 QYYCTCIHI*TSDMHDCFTIF 1326 Score = 27.2 bits (53), Expect(2) = 1.5 Identities = 10/24 (41%), Positives = 13/24 (54%) Frame = +3 / -3 Query: 888 CFVFFKPVWREIYVYAWFMSNIPT 959 C + P W YAWFM+N+ T Sbjct: 949 CPILSIPCWNA*KKYAWFMANMFT 878
>LOC_Os09g26470:12009.t02326:unspliced-genomic IBR domain containing protein, expressed| Length = 5649 Score = 30.4 bits (60), Expect(2) = 1.6 Identities = 14/32 (43%), Positives = 15/32 (46%) Frame = -2 / +1 Query: 567 GLDNAFENIVFFDWSLRLGLGACPDVACAYNP 472 G A + F DW LRL GA P AY P Sbjct: 1510 GCKKAIDFAAFTDWGLRLAEGAVPHDRRAYCP 1605 Score = 26.7 bits (52), Expect(2) = 1.6 Identities = 7/11 (63%), Positives = 8/11 (72%) Frame = -3 / +3 Query: 704 KPCPWRCHWSL 672 +PCPWR W L Sbjct: 594 RPCPWRRQWPL 626
>LOC_Os10g36370:12010.t02919:unspliced-genomic chaperone protein dnaJ 13, putative, expressed| Length = 8824 Score = 34.1 bits (68), Expect = 1.8 Identities = 12/38 (31%), Positives = 25/38 (65%) Frame = +2 / +1 Query: 785 VFSLVLYVICIFPKAHALCGFIVAHLAIHLKLLDLFCF 898 ++++ + V C+F ++H G ++ LAI K+L +FC+ Sbjct: 4657 IYNIGIQVKCLFLRSHVFGGILL*SLAISEKILLVFCY 4770
>LOC_Os06g13670:12006.t01242:unspliced-genomic transcription regulator of the cell cycle TaE2Fe, putative, expressed| Length = 5826 Score = 33.6 bits (67), Expect = 2.4 Identities = 12/24 (50%), Positives = 14/24 (58%) Frame = +3 / -1 Query: 774 IEYQYFLWFCMLYVFSLKLMHCVA 845 I Y YF W C Y+FS+ L VA Sbjct: 2997 ITYVYFFWLCCFYIFSMVLCTYVA 2926
>LOC_Os09g36470:12009.t03123:unspliced-genomic minus agglutinin, putative, expressed| Length = 3738 Score = 33.6 bits (67), Expect = 2.4 Identities = 11/27 (40%), Positives = 17/27 (62%) Frame = +1 / +1 Query: 925 MCMPGSCLISQQSFCCFTMKILNVTEN 1005 +C P SC+I S CC T ++ VT++ Sbjct: 2485 ICSPSSCVIRTSSSCCCTARVDRVTDH 2565
>LOC_Os05g36070:12005.t03200:unspliced-genomic minor histocompatibility antigen H13, putative, expressed| Length = 6450 Score = 33.6 bits (67), Expect = 2.4 Identities = 13/33 (39%), Positives = 18/33 (54%) Frame = +1 / +1 Query: 751 CCMHNQEASSTSIFSGFVCYMYFP*SSCTVWLY 849 CC + TS FS +CY F SS T+W++ Sbjct: 3106 CCSSTSLSPETSRFSPSLCYCMFVWSSQTLWMF 3204
>LOC_Os01g38530:12001.t03389:unspliced-genomic early flowering 3, putative, expressed| Length = 6081 Score = 33.6 bits (67), Expect = 2.4 Identities = 14/31 (45%), Positives = 19/31 (61%) Frame = +2 / +3 Query: 17 PHDTPPTHRKKKSHQTLFRVLLLGGFWFVRG 109 PH+ PT+R + F LLL G+WF+RG Sbjct: 138 PHNLRPTNRSGEGVLLPFLDLLLVGWWFLRG 230
>LOC_Os12g07380:12012.t00622:unspliced-genomic expressed protein| Length = 951 Score = 33.1 bits (66), Expect = 3.3 Identities = 12/35 (34%), Positives = 15/35 (42%) Frame = +3 / +1 Query: 627 TLKQTQPRKTERLILQAPMTPPWTWFQTSREMGTT 731 T T PR+ R+ P PW W T+ TT Sbjct: 145 TAAATPPRRRRRITTTVPAAAPWRWRMTTTTTSTT 249
>LOC_Os11g33190:12011.t02913:unspliced-genomic F-box domain containing protein, expressed| Length = 2897 Score = 33.1 bits (66), Expect = 3.4 Identities = 15/26 (57%), Positives = 15/26 (57%) Frame = +1 / +2 Query: 247 RPAEALLPGRRAAGPRKAPPMDLEEA 324 RPAEAL G R GP PP L EA Sbjct: 2201 RPAEALAGGPRRVGPPPRPPARLAEA 2278
>LOC_Os09g03400:12009.t00237:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 1445 Score = 33.1 bits (66), Expect = 3.4 Identities = 9/14 (64%), Positives = 12/14 (85%) Frame = -2 / -2 Query: 291 RACRSPAWKESFCW 250 +ACRS AW+ +FCW Sbjct: 877 KACRSGAWRRTFCW 836
>LOC_Os07g16430:12007.t01503:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 2958 Score = 33.1 bits (66), Expect = 3.4 Identities = 9/14 (64%), Positives = 12/14 (85%) Frame = -2 / -3 Query: 291 RACRSPAWKESFCW 250 +ACRS AW+ +FCW Sbjct: 607 KACRSGAWRRTFCW 566
>LOC_Os07g05280:12007.t00411:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 3963 Score = 33.1 bits (66), Expect = 3.4 Identities = 13/33 (39%), Positives = 15/33 (45%) Frame = +1 / -1 Query: 400 CTCIPKGTSASHDCESVYKYPTLSWVVRTSNIW 498 CTC P T + KY T +WV SN W Sbjct: 1566 CTCSPSSTVWERSPDLFSKYTTFTWVRLESNKW 1468
>LOC_Os06g26340:12006.t02439:unspliced-genomic OsMPK20-3 - putative MAPK based on amino acid sequence homology,| expressed Length = 8821 Score = 32.7 bits (65), Expect = 4.6 Identities = 14/32 (43%), Positives = 20/32 (62%) Frame = -1 / +2 Query: 757 CNMFP*TDLVVPISRDV*NHVHGGVIGAWRIS 662 C +P + V+ SRDV*NH+ V+ +WR S Sbjct: 8525 CFSWPGSSCVLQSSRDV*NHLDLSVVQSWRSS 8620
>LOC_Os06g01304:12006.t00031:unspliced-genomic spotted leaf protein 11, putative, expressed| Length = 5761 Score = 26.3 bits (51), Expect(3) = 5.5 Identities = 10/35 (28%), Positives = 17/35 (48%) Frame = +1 / +1 Query: 913 GEKSMCMPGSCLISQQSFCCFTMKILNVTENCYDI 1017 G + +PG L Q ++ +++ENCY I Sbjct: 2533 GH*KLLLPGEALCFGQCIWWLHSEVSSISENCYHI 2637 Score = 25.8 bits (50), Expect(3) = 5.5 Identities = 10/21 (47%), Positives = 12/21 (57%) Frame = +3 / +3 Query: 447 RLQVSNPQLGCTHKQHLGMLP 509 R Q +P+LGC QHL P Sbjct: 468 RQQADSPRLGCLALQHLPHAP 530 Score = 23.1 bits (44), Expect(3) = 5.5 Identities = 6/11 (54%), Positives = 7/11 (63%) Frame = +3 / +3 Query: 669 LQAPMTPPWTW 701 + P TP WTW Sbjct: 558 IMQPPTPSWTW 590
>LOC_Os05g46260:12005.t04114:unspliced-genomic expressed protein| Length = 4710 Score = 32.2 bits (64), Expect = 6.3 Identities = 10/23 (43%), Positives = 16/23 (69%) Frame = +3 / -3 Query: 750 MLHAQPGSIEYQYFLWFCMLYVF 818 MLH P +++QY L C+L++F Sbjct: 1981 MLHLDPSFLQHQYHLALCLLFLF 1913
>LOC_Os05g02510:12005.t00150:unspliced-genomic beta-hexosaminidase beta chain precursor, putative, expressed| Length = 5831 Score = 32.2 bits (64), Expect = 6.3 Identities = 14/38 (36%), Positives = 18/38 (47%) Frame = +3 / +1 Query: 654 TERLILQAPMTPPWTWFQTSREMGTTKSVHGNMLHAQP 767 T R +AP PP W + SR + S+HG A P Sbjct: 229 TSRSTARAPAAPPRRWPRRSRGTDRSSSLHGRTPRATP 342
>LOC_Os03g45170:12003.t03897:unspliced-genomic high-affinity cationic amino acid transporter 1, putative, expressed| Length = 5749 Score = 32.2 bits (64), Expect = 6.3 Identities = 12/30 (40%), Positives = 17/30 (56%) Frame = +3 / +2 Query: 897 FFKPVWREIYVYAWFMSNIPTIFLLLYHED 986 FF+P+WR I + F+ I F+L H D Sbjct: 4763 FFRPIWRYIANCSLFLGRIKHCFILPVHSD 4852
>LOC_Os03g22160:12003.t01968:unspliced-genomic relA-SpoT like protein RSH1, putative, expressed| Length = 11212 Score = 32.2 bits (64), Expect = 6.3 Identities = 12/26 (46%), Positives = 16/26 (61%) Frame = -3 / +2 Query: 746 SMN*LSSTHFP*CLKPCPWRCHWSLE 669 S++* +S F L PCPW C W L+ Sbjct: 6722 SIH*CASIQFISDLLPCPWSCSWYLD 6799
>LOC_Os11g44014:12011.t03931:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 11937 Score = 32.2 bits (64), Expect = 6.3 Identities = 10/31 (32%), Positives = 14/31 (45%) Frame = +1 / -2 Query: 919 KSMCMPGSCLISQQSFCCFTMKILNVTENCY 1011 K C P C+ S FCC ++L + Y Sbjct: 10175 KQSCFPNGCIKSYGMFCCINFQVLGSLSSIY 10083
>LOC_Os08g39960:12008.t03727:unspliced-genomic 3-oxoacyl-reductase, chloroplast precursor, putative, expressed| Length = 1700 Score = 32.2 bits (64), Expect = 6.3 Identities = 12/23 (52%), Positives = 14/23 (60%) Frame = +1 / +2 Query: 247 RPAEALLPGRRAAGPRKAPPMDL 315 RP LPGRR PR+ PP+ L Sbjct: 173 RPGARRLPGRRRRAPRRPPPLAL 241
>LOC_Os09g38990:12009.t03366:unspliced-genomic hypothetical protein| Length = 2793 Score = 26.3 bits (51), Expect(3) = 6.8 Identities = 7/12 (58%), Positives = 11/12 (91%) Frame = +3 / -3 Query: 771 SIEYQYFLWFCM 806 +I++ YFLWFC+ Sbjct: 2191 TIQWVYFLWFCV 2156 Score = 23.5 bits (45), Expect(3) = 6.8 Identities = 8/17 (47%), Positives = 11/17 (64%) Frame = +3 / -2 Query: 642 QPRKTERLILQAPMTPP 692 +PR T R +L P +PP Sbjct: 2669 RPRHTHRQLLLTPRSPP 2619 Score = 23.1 bits (44), Expect(3) = 6.8 Identities = 11/33 (33%), Positives = 15/33 (45%) Frame = +2 / -1 Query: 410 SPRVHQHPMTVNPFTSIQPSAGLYAQATSGHAP 508 +P H+ V + P A LYA T+ H P Sbjct: 2748 APPPHKLCRHVGSLHWLPPPASLYAPKTAPHPP 2650
>LOC_Os05g05240:12005.t00414:unspliced-genomic hydrolase/ protein serine/threonine phosphatase, putative,| expressed Length = 8938 Score = 27.6 bits (54), Expect(2) = 7.5 Identities = 10/21 (47%), Positives = 14/21 (66%) Frame = +2 / -1 Query: 2 ERAWSPHDTPPTHRKKKSHQT 64 E++ S HD T +KKK H+T Sbjct: 415 EKSSSKHDARETSKKKKEHRT 353 Score = 27.6 bits (54), Expect(2) = 7.5 Identities = 12/26 (46%), Positives = 16/26 (61%) Frame = +2 / -2 Query: 464 PSAGLYAQATSGHAPRPSLNDQSKNT 541 PS LYA A + HAP P++ S +T Sbjct: 201 PSTSLYAGAGTTHAPFPAVPIPSSST 124
>LOC_Os02g37850:12002.t03423:unspliced-genomic expressed protein| Length = 4289 Score = 24.9 bits (48), Expect(2) = 7.6 Identities = 9/21 (42%), Positives = 13/21 (61%) Frame = -3 / +3 Query: 95 RSHRGEERGRGFDAIFFFYGW 33 R+ R E+ G +FFF+GW Sbjct: 135 RNRRRAEQIVGCFRVFFFFGW 197 Score = 24.0 bits (46), Expect(2) = 7.6 Identities = 7/9 (77%), Positives = 8/9 (88%) Frame = -2 / +2 Query: 51 FFFLWVGGV 25 FFF W+GGV Sbjct: 179 FFFFWLGGV 205
>LOC_Os04g06810:12004.t00556:unspliced-genomic expressed protein| Length = 2347 Score = 29.9 bits (59), Expect(2) = 7.8 Identities = 8/15 (53%), Positives = 11/15 (73%) Frame = +3 / -2 Query: 774 IEYQYFLWFCMLYVF 818 ++Y F WFC +YVF Sbjct: 2094 LDYASFFWFCFMYVF 2050 Score = 23.5 bits (45), Expect(2) = 7.8 Identities = 10/33 (30%), Positives = 15/33 (45%) Frame = +1 / -3 Query: 832 CTVWLYSCTPGDSLKIVGFVLFFSSLFGEKSMC 930 CT W S P S+ +G + S+ +MC Sbjct: 1553 CTRWALSLPPVLSITSIGCLFSLSARMRSVAMC 1455
>LOC_Os03g04310:12003.t00310:unspliced-genomic DNA binding protein, putative, expressed| Length = 2212 Score = 24.9 bits (48), Expect(2) = 8.0 Identities = 12/46 (26%), Positives = 19/46 (41%) Frame = +3 / -2 Query: 726 TTKSVHGNMLHAQPGSIEYQYFLWFCMLYVFSLKLMHCVAL*LHTW 863 +T G+ +Q S++Y C L + HC +* H W Sbjct: 2130 STNHTAGSHTDSQMQSLQYLSKSLICSLVCSETRYYHC**I*THKW 1993 Score = 24.0 bits (46), Expect(2) = 8.0 Identities = 9/23 (39%), Positives = 12/23 (52%) Frame = +3 / -2 Query: 912 WREIYVYAWFMSNIPTIFLLLYH 980 W IY +W ++ LLLYH Sbjct: 1995 WYSIYYNSWSEVHMHV*LLLLYH 1927
>LOC_Os03g60580:12003.t05296:unspliced-genomic actin-depolymerizing factor 4, putative, expressed| Length = 924 Score = 28.1 bits (55), Expect(2) = 8.2 Identities = 10/19 (52%), Positives = 13/19 (68%) Frame = +2 / +1 Query: 905 ACLERNLCVCLVHV*YPNN 961 ACL LC C+V++ Y NN Sbjct: 823 ACLVFGLCTCVVNLHYANN 879 Score = 24.0 bits (46), Expect(2) = 8.2 Identities = 11/29 (37%), Positives = 14/29 (48%) Frame = +2 / +2 Query: 566 PVRRSLQTYHLTQGAGNGGRNTEANSAAQ 652 P+RR H + G+GGR AAQ Sbjct: 485 PLRRVRPRLHRQRRHGHGGRRRGRRGAAQ 571
>LOC_Os12g44200:12012.t04086:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 4080 Score = 31.8 bits (63), Expect = 8.7 Identities = 12/33 (36%), Positives = 14/33 (42%) Frame = +1 / -1 Query: 400 CTCIPKGTSASHDCESVYKYPTLSWVVRTSNIW 498 CTC P T KY + +WV SN W Sbjct: 1566 CTCSPSSTVGKRSPNLFSKYTSFTWVRLESNKW 1468
>LOC_Os12g05520:12012.t00440:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 4081 Score = 31.8 bits (63), Expect = 8.7 Identities = 12/33 (36%), Positives = 14/33 (42%) Frame = +1 / -1 Query: 400 CTCIPKGTSASHDCESVYKYPTLSWVVRTSNIW 498 CTC P T KY + +WV SN W Sbjct: 1567 CTCSPSSTVGKRSPNLFSKYTSFTWVRLESNKW 1469
>LOC_Os10g01750:12010.t00072:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 4981 Score = 31.8 bits (63), Expect = 8.7 Identities = 12/33 (36%), Positives = 14/33 (42%) Frame = +1 / -1 Query: 400 CTCIPKGTSASHDCESVYKYPTLSWVVRTSNIW 498 CTC P T KY + +WV SN W Sbjct: 1567 CTCSPSSTVGKRSPNLFSKYTSFTWVRLESNKW 1469
>LOC_Os08g26390:12008.t02405:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 1367 Score = 31.8 bits (63), Expect = 8.7 Identities = 14/38 (36%), Positives = 22/38 (57%) Frame = +2 / +1 Query: 626 NTEANSAAQNREANSPSSNDTSMDMVSDITGNGYY*VS 739 ++ AN + ++ EA NDT +D+VSD YY +S Sbjct: 73 HSSANVSMEDAEAPQRLLNDTDLDLVSDRERQAYYMLS 186
>LOC_Os04g46620:12004.t04191:unspliced-genomic T-complex protein 1 subunit alpha, putative, expressed| Length = 5842 Score = 31.8 bits (63), Expect = 8.7 Identities = 16/52 (30%), Positives = 26/52 (50%) Frame = +2 / -1 Query: 398 DAHVSPRVHQHPMTVNPFTSIQPSAGLYAQATSGHAPRPSLNDQSKNTIFSN 553 D H + +VH + PFT I S+ + + TS PR ++ S +I +N Sbjct: 3724 DLHGN*KVHTALVFFVPFTKITSSSAILSSTTSSACPRNDESNVSSPSISAN 3569
>LOC_Os03g26290:12003.t02317:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 4078 Score = 31.8 bits (63), Expect = 8.7 Identities = 12/33 (36%), Positives = 14/33 (42%) Frame = +1 / -1 Query: 400 CTCIPKGTSASHDCESVYKYPTLSWVVRTSNIW 498 CTC P T KY + +WV SN W Sbjct: 1564 CTCSPSSTVGKRSPNLFSKYTSFTWVRLESNKW 1466
>LOC_Os02g50330:12002.t04617:unspliced-genomic RNA-directed RNA polymerase 2, putative, expressed| Length = 7397 Score = 31.8 bits (63), Expect = 8.7 Identities = 10/29 (34%), Positives = 18/29 (62%) Frame = -2 / -1 Query: 819 KIHITYKTRENTGTRCFLVVHATCFHELT 733 +IH +K ++NT + H+TC H++T Sbjct: 6221 QIHFFFKKKKNTEFATLISEHSTCLHKIT 6135 Database: tigr.seq.out Posted date: Jul 20, 2007 8:58 AM Number of letters in database: 166,841,660 Number of sequences in database: 56,278 Lambda K H 0.318 0.134 0.401 Matrix: BLOSUM62 Number of Sequences: 56278 Number of Hits to DB: 449,298,505 Number of extensions: 7883616 Number of successful extensions: 34521 Number of sequences better than 10.0: 47 Length of query: 351 Length of database: 55,613,886 Length adjustment: 50 Effective length of query: 301 Effective length of database: 52,799,986 Effective search space: 15892795786 Effective search space used: 15892795786 Neighboring words threshold: 13 Window for multiple hits: 40 X1: 16 ( 7.3 bits)
