ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf145m20 |
|---|---|
| Clone Library Name | barley_pub |
>P39572:GIANT_DROME Protein giant - Drosophila melanogaster (Fruit fly)| Length = 448 Score = 37.0 bits (84), Expect = 0.14 Identities = 40/154 (25%), Positives = 67/154 (43%), Gaps = 4/154 (2%) Frame = +2 Query: 182 RTLYSSFCG---AANSLSLLYSQAIAQQKLSFQAGERQALEKLHQWILRKHDEESRLTVA 352 +T YS G A+ + +LLY+ + QQ+ Q ++Q ++L + L A Sbjct: 119 QTSYSYGSGSPSASPTSNLLYAAQMQQQQHQQQQQQQQQQQQL-----------ASLYPA 167 Query: 353 DIMSHIQHEIDYGGTDAHVSPRVHQHPMTVNPFTSIQPSAGLYAQATSGHAPRPSLNDQS 532 S+I+ E T P+V + F + +A A A+S ++PRP+ N + Sbjct: 168 FYYSNIKQE---QATPTAAPPKVTPTANLLQTFAAASAAAAAAAAASSTNSPRPASNAST 224 Query: 533 KN-TIFSNALSSPVRRSLQTYHLTQGAGNGGRNT 631 + N LS V + T T +G G+NT Sbjct: 225 MQIDVLENPLSPAVEATTPT---TSSSGEAGKNT 255
>Q9HCE9:TM16H_HUMAN Transmembrane protein 16H - Homo sapiens (Human)| Length = 1232 Score = 36.2 bits (82), Expect = 0.23 Identities = 38/148 (25%), Positives = 60/148 (40%) Frame = +2 Query: 251 QQKLSFQAGERQALEKLHQWILRKHDEESRLTVADIMSHIQHEIDYGGTDAHVSPRVHQH 430 Q++ +F+ ERQA + Q R+ +EE R A+ H + E D GG + + Sbjct: 881 QRREAFKRHERQAQHRYQQQQRRRREEEERQRHAE--HHARREHDSGGREEARAEGSGLD 938 Query: 431 PMTVNPFTSIQPSAGLYAQATSGHAPRPSLNDQSKNTIFSNALSSPVRRSLQTYHLTQGA 610 P T +S + SA GH P S +N + LQ L+ GA Sbjct: 939 PAT----SSEKASAKAKGSTAGGHGPERPKRPGSL-LAPNNVMKLKQIIPLQGKFLSSGA 993 Query: 611 GNGGRNTEANSAAQNREANSPSSNDTSM 694 + A + + A SP+ +DT + Sbjct: 994 TSSLAAAGAGATTRPPPAQSPTGSDTRL 1021
>Q04749:AVO2_YEAST Target of rapamycin complex 2 subunit AVO2 - Saccharomyces| cerevisiae (Baker's yeast) Length = 426 Score = 33.5 bits (75), Expect = 1.5 Identities = 30/106 (28%), Positives = 45/106 (42%), Gaps = 6/106 (5%) Frame = +2 Query: 476 LYAQATSGHAPRPSLNDQSKNTIFSNALSSPVRRSLQTYHLTQGAGNGGRNTEANSAAQN 655 L A+AT P P L+ S +++SN PV + H T G G R++ N Sbjct: 222 LNAKATFEDGPSPVLSMNSPYSLYSNNSPLPVLPRRISTHTTSGNGGNRRSSITNPVFNP 281 Query: 656 R------EANSPSSNDTSMDMVSDITGNGYY*VSSWKHVACTTRKH 775 R ++ S SSN +S V+ I VS K + + +H Sbjct: 282 RKPTLSTDSFSSSSNSSSRLRVNSINVKTPVGVSPKKELVSESVRH 327
>P22470:SAN1_YEAST Protein SAN1 - Saccharomyces cerevisiae (Baker's yeast)| Length = 610 Score = 33.1 bits (74), Expect = 2.0 Identities = 33/123 (26%), Positives = 57/123 (46%), Gaps = 12/123 (9%) Frame = +2 Query: 389 GGTDAHVSPRVHQHPMTVNPFTSIQPSAGLYAQATSGHAPRPSLNDQSKNTIFSNALSSP 568 GG++ + SPR P+T+ F S P+ + + S +P + S NT S+ + P Sbjct: 398 GGSNNNQSPRWVPIPLTLFQFHSPNPNP---SASDSSASPSAANGPNSNNT--SSDATDP 452 Query: 569 VRRSLQTY--HLTQGAGNGGRNTEANSA-----AQNREANSPSSNDTS-----MDMVSDI 712 L+ H+ A G +T A +A N+ N SS+DT+ ++ +S + Sbjct: 453 HHNRLRAVLDHIFNVAQRGTSDTSATTAPGAQTVHNQGRNDSSSSDTTQGSSFLENISRL 512 Query: 713 TGN 721 TG+ Sbjct: 513 TGH 515
>P34487:YMJB_CAEEL Uncharacterized protein F59B2.12 - Caenorhabditis elegans| Length = 918 Score = 32.7 bits (73), Expect = 2.6 Identities = 25/59 (42%), Positives = 29/59 (49%), Gaps = 1/59 (1%) Frame = +2 Query: 548 SNALSSPVRRSLQTYHLTQGAGNGGRNTEANSAAQ-NREANSPSSNDTSMDMVSDITGN 721 SNA ++ S Q HL Q NG T A + Q AN+ SS DTSM V D GN Sbjct: 569 SNAFNTSDAESNQFDHLHQKTANGTEITHAKDSKQVAASANAKSSLDTSMSAV-DAKGN 626
>Q96SL1:DIRC2_HUMAN Disrupted in renal carcinoma protein 2 - Homo sapiens (Human)| Length = 478 Score = 28.9 bits (63), Expect(2) = 3.8 Identities = 13/36 (36%), Positives = 21/36 (58%), Gaps = 4/36 (11%) Frame = +1 Query: 880 VGFVLFFSSLFGEK----SMCMPGSCLISQQSFCCF 975 +G +LFF + + + + C+PGSCL+S CF Sbjct: 428 MGVLLFFLTFYHTELSWFNWCLPGSCLLSLLLILCF 463 Score = 21.9 bits (45), Expect(2) = 3.8 Identities = 8/27 (29%), Positives = 14/27 (51%) Frame = +2 Query: 737 SSWKHVACTTRKHRVPVFSLVLYVICI 817 S+W + C +P+ ++ LY CI Sbjct: 361 STWFTLTCLNSITHLPLTTVTLYASCI 387
>Q63046:RUNX1_RAT Runt-related transcription factor 1 - Rattus norvegicus (Rat)| Length = 450 Score = 32.0 bits (71), Expect = 4.4 Identities = 27/104 (25%), Positives = 46/104 (44%), Gaps = 4/104 (3%) Frame = +3 Query: 444 IRLQVSNPQLGCTHKQHLGMLPDPASMT-SQRI-RYSQMHYQARSAGASRPIT*PKVLV- 614 I++ V P+ H+Q L P S++ S+R+ Q+ A P P Sbjct: 166 IKITVDGPREPRRHRQKLDDQTKPGSLSFSERLSELEQLRRTAMRVSPHHPAPTPNPRAS 225 Query: 615 MEDGTLKQTQPRKTERLILQAPMTPPWTWFQTSREMGT-TKSVH 743 + T QP+ + Q +PPW++ Q+ + +G+ T SVH Sbjct: 226 LNHSTAFNPQPQSQMQDARQIQPSPPWSYDQSYQYLGSITSSVH 269
>P39940:RSP5_YEAST E3 ubiquitin-protein ligase RSP5 - Saccharomyces cerevisiae| (Baker's yeast) Length = 809 Score = 32.0 bits (71), Expect = 4.4 Identities = 26/79 (32%), Positives = 37/79 (46%), Gaps = 3/79 (3%) Frame = +2 Query: 464 PSAGLYAQATSGHAPRPSLNDQSKNTIFSNALSSPVRRSLQTYHLTQGAGNGGRNT--EA 637 PS+ ++QA SGH S N S T +N S+ R+ T H ++G +T Sbjct: 139 PSSSPHSQAPSGHTASSSTNTSS--TTRTNGHSTSSTRNHSTSHPSRGTAQAVESTLQSG 196 Query: 638 NSAAQNREANS-PSSNDTS 691 +AA N S S+N TS Sbjct: 197 TTAATNTATTSHRSTNSTS 215
>Q05152:CAC1B_RABIT Voltage-dependent N-type calcium channel subunit alpha-1B -| Oryctolagus cuniculus (Rabbit) Length = 2339 Score = 32.0 bits (71), Expect = 4.4 Identities = 22/73 (30%), Positives = 32/73 (43%), Gaps = 3/73 (4%) Frame = +2 Query: 416 RVHQHPMTVNPFTSIQPSAGLYAQATSGHAPRPSLNDQSKNTIFSNALSS---PVRRSLQ 586 R+ P S P+ L A + S + +S T + ++L+S P+RR Sbjct: 2253 RIGSDPYLGQRLDSEAPARALPEDAPAFEETAASNSGRSSRTSYVSSLTSQPPPLRRVPN 2312 Query: 587 TYHLTQGAGNGGR 625 YH T G G GGR Sbjct: 2313 GYHCTLGLGGGGR 2325
>Q03347:RUNX1_MOUSE Runt-related transcription factor 1 - Mus musculus (Mouse)| Length = 451 Score = 31.6 bits (70), Expect = 5.7 Identities = 27/105 (25%), Positives = 46/105 (43%), Gaps = 5/105 (4%) Frame = +3 Query: 444 IRLQVSNPQLGCTHKQHLGMLPDPASMT-SQRI-RYSQMHYQARSAGASRPIT*PKVLV- 614 I++ V P+ H+Q L P S++ S+R+ Q+ A P P Sbjct: 166 IKITVDGPREPRRHRQKLDDQTKPGSLSFSERLSELEQLRRTAMRVSPHHPAPTPNPRAS 225 Query: 615 MEDGTLKQTQPRKTERLILQAPMTPPWTWFQTSREMG--TTKSVH 743 + T QP+ + Q +PPW++ Q+ + +G T+ SVH Sbjct: 226 LNHSTAFNPQPQSQMQDARQIQPSPPWSYDQSYQYLGSITSSSVH 270
>Q5T011:K0467_HUMAN Uncharacterized protein KIAA0467 - Homo sapiens (Human)| Length = 2533 Score = 31.6 bits (70), Expect = 5.7 Identities = 22/68 (32%), Positives = 28/68 (41%) Frame = +2 Query: 455 SIQPSAGLYAQATSGHAPRPSLNDQSKNTIFSNALSSPVRRSLQTYHLTQGAGNGGRNTE 634 S++ G +AT H P S+ S N LS P RR LQ Y AG TE Sbjct: 275 SLKDLGGTGIKATKSHVPVLSVTLASDNAQNQGELSPPFRRDLQAY-----AGRQASQTE 329 Query: 635 ANSAAQNR 658 + + R Sbjct: 330 SADGPRTR 337
>Q5BBK4:ATG13_EMENI Autophagy-related protein 13 - Emericella nidulans (Aspergillus| nidulans) Length = 974 Score = 31.6 bits (70), Expect = 5.7 Identities = 41/164 (25%), Positives = 57/164 (34%), Gaps = 24/164 (14%) Frame = +2 Query: 371 QHEIDYGGTDAHVSPRVHQHPMT---------------------VNPFTSIQPSAGLYAQ 487 Q + GG DA V+P V P+T V P T P + L A Sbjct: 332 QPSLPSGGLDARVTPEVGSAPLTRRTVEDPDLSRAYGSLSTFHHVGPTTGASPISALRA- 390 Query: 488 ATSGHAPRPSLNDQSKNTIFSNALSSPVRRSLQTYHLTQGAGNGGRNTEANSAAQNREAN 667 A A PS S F+ A +SPV R+ + T + + Sbjct: 391 AREARASSPSPPTSSHRNSFAAARASPVGRAATLANDTNPNVARRPSISFQPFKAPPLSA 450 Query: 668 SPSSNDTSMDMVSDITGNGYY*VSSWKHV---ACTTRKHRVPVF 790 SPS D + TG G +S +H+ + TT + P F Sbjct: 451 SPSLVDPPLSASPRTTGAGRTSLSDSRHMPPPSVTTSSRKPPSF 494
>Q63WI3:SYI1_BURPS Isoleucyl-tRNA synthetase 1 - Burkholderia pseudomallei| (Pseudomonas pseudomallei) Length = 945 Score = 31.2 bits (69), Expect = 7.5 Identities = 15/30 (50%), Positives = 22/30 (73%), Gaps = 2/30 (6%) Frame = +2 Query: 524 DQSKNTIFSNALSSPVRRSLQT--YHLTQG 607 D K+ ++++A +SP RRS QT YH+TQG Sbjct: 749 DVLKDRLYTSAPASPARRSAQTALYHVTQG 778
>Q62HL4:SYI1_BURMA Isoleucyl-tRNA synthetase 1 - Burkholderia mallei (Pseudomonas| mallei) Length = 945 Score = 31.2 bits (69), Expect = 7.5 Identities = 15/30 (50%), Positives = 22/30 (73%), Gaps = 2/30 (6%) Frame = +2 Query: 524 DQSKNTIFSNALSSPVRRSLQT--YHLTQG 607 D K+ ++++A +SP RRS QT YH+TQG Sbjct: 749 DVLKDRLYTSAPASPARRSAQTALYHVTQG 778
>Q24256:BARH2_DROME Homeobox protein B-H2 - Drosophila melanogaster (Fruit fly)| Length = 645 Score = 31.2 bits (69), Expect = 7.5 Identities = 22/100 (22%), Positives = 43/100 (43%) Frame = +2 Query: 422 HQHPMTVNPFTSIQPSAGLYAQATSGHAPRPSLNDQSKNTIFSNALSSPVRRSLQTYHLT 601 H H +T +P + + L Q H P +++S++ + L Sbjct: 224 HGHGLTGDPAQHLSHLSHLSHQQHHPHLHHPMHDERSRSPLM----------------LQ 267 Query: 602 QGAGNGGRNTEANSAAQNREANSPSSNDTSMDMVSDITGN 721 Q GNGG N N+ + + N+ ++N+++ + I+GN Sbjct: 268 QLGGNGGNNNNNNNNSSSASNNNNNNNNSASANSNIISGN 307
>P40021:YEM3_YEAST Uncharacterized protein YER033C - Saccharomyces cerevisiae (Baker's| yeast) Length = 1076 Score = 30.8 bits (68), Expect = 9.8 Identities = 28/108 (25%), Positives = 42/108 (38%), Gaps = 17/108 (15%) Frame = +2 Query: 416 RVHQHPMTVNPFTSIQPSAGLYAQATSGHAPRPSLNDQSKN-----------------TI 544 R+H H +N + Q L A A SG++ NDQS N T+ Sbjct: 272 RIHSHDDIINLGKASQMDMSLLAAAFSGNSTTTINNDQSSNEQTDEKILDIERVTTTSTL 331 Query: 545 FSNALSSPVRRSLQTYHLTQGAGNGGRNTEANSAAQNREANSPSSNDT 688 S+ +SP+ +S Y T R+ + S+ N S N+T Sbjct: 332 TSSETTSPINKSPCFYSQTLSLSPKIRHGDLQSSPSKVNKND-SQNET 378
>Q09838:PRZ1_SCHPO Transcriptional regulator prz1 - Schizosaccharomyces pombe (Fission| yeast) Length = 681 Score = 30.8 bits (68), Expect = 9.8 Identities = 30/105 (28%), Positives = 44/105 (41%), Gaps = 18/105 (17%) Frame = +2 Query: 422 HQHPMTVNPFTSIQPSAGLYAQATSGHAPRPS---LNDQS-----KNTIFSNALS--SPV 571 H HP T PF + S + +G+ P S LND S +F N++S S Sbjct: 74 HLHPNTSEPFKTSSKSDEYDSYPRTGNVPTFSFTELNDTSVSGFGSQAVFENSVSPLSNP 133 Query: 572 RRSLQTYHLTQGAG--NGGRNTEANSAAQNREA------NSPSSN 682 S Q + LTQG+ + + N+ R++ PSSN Sbjct: 134 SNSPQAFDLTQGSSSTHNANDFTVNNVGSRRQSIYEFNIGIPSSN 178
>P0A4Y4:GLGX_MYCTU Glycogen operon protein glgX homolog - Mycobacterium tuberculosis| Length = 721 Score = 30.8 bits (68), Expect = 9.8 Identities = 16/74 (21%), Positives = 31/74 (41%) Frame = +2 Query: 164 RLDEADRTLYSSFCGAANSLSLLYSQAIAQQKLSFQAGERQALEKLHQWILRKHDEESRL 343 RL + D Y F G NSL+ + + + ++ L W++ H + R Sbjct: 313 RLMDHDLRFYKDFTGTGNSLNARHPHTL-----------QLIMDSLRYWVIEMHVDGFRF 361 Query: 344 TVADIMSHIQHEID 385 +A ++ H++D Sbjct: 362 DLASTLARELHDVD 375
>P0A4Y5:GLGX_MYCBO Glycogen operon protein glgX homolog - Mycobacterium bovis| Length = 721 Score = 30.8 bits (68), Expect = 9.8 Identities = 16/74 (21%), Positives = 31/74 (41%) Frame = +2 Query: 164 RLDEADRTLYSSFCGAANSLSLLYSQAIAQQKLSFQAGERQALEKLHQWILRKHDEESRL 343 RL + D Y F G NSL+ + + + ++ L W++ H + R Sbjct: 313 RLMDHDLRFYKDFTGTGNSLNARHPHTL-----------QLIMDSLRYWVIEMHVDGFRF 361 Query: 344 TVADIMSHIQHEID 385 +A ++ H++D Sbjct: 362 DLASTLARELHDVD 375 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 185,475,343 Number of extensions: 4208717 Number of successful extensions: 11368 Number of sequences better than 10.0: 19 Number of HSP's gapped: 11360 Number of HSP's successfully gapped: 20 Length of query: 351 Length of database: 100,686,439 Length adjustment: 114 Effective length of query: 237 Effective length of database: 69,416,809 Effective search space: 16451783733 Effective search space used: 16451783733 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
