ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf148e23 |
|---|---|
| Clone Library Name | barley_pub |
>LOC_Os01g34770:12001.t03034:unspliced-genomic expressed protein| Length = 2408 Score = 31.8 bits (63), Expect(2) = 0.11 Identities = 16/33 (48%), Positives = 18/33 (54%) Frame = -3 / -1 Query: 201 AGQGRLFCFRPHGQRHRWSSQEHRRCRVREPEP 103 AG GRL C RP G+ R + R RVR P P Sbjct: 641 AGGGRLVCPRPAGRHRRALGRIGRPERVRVPGP 543 Score = 22.6 bits (43), Expect(2) = 0.11 Identities = 7/10 (70%), Positives = 8/10 (80%) Frame = -2 / -1 Query: 76 GPKRTTRTPC 47 GP+R TR PC Sbjct: 431 GPRRGTRRPC 402
>LOC_Os03g52990:12003.t04622:unspliced-genomic hypothetical protein| Length = 423 Score = 30.4 bits (60), Expect(2) = 0.94 Identities = 10/10 (100%), Positives = 10/10 (100%) Frame = +3 / +3 Query: 69 FGPGFIPHDS 98 FGPGFIPHDS Sbjct: 57 FGPGFIPHDS 86 Score = 21.7 bits (41), Expect(2) = 0.94 Identities = 8/11 (72%), Positives = 8/11 (72%) Frame = +3 / +2 Query: 3 WLSRGMTPGPK 35 WL RGMT G K Sbjct: 2 WLLRGMTSGLK 34 Score = 30.9 bits (61), Expect = 7.7 Identities = 10/10 (100%), Positives = 10/10 (100%) Frame = -2 / -3 Query: 97 ESWGMKPGPK 68 ESWGMKPGPK Sbjct: 85 ESWGMKPGPK 56
>LOC_Os06g43560:12006.t04046:unspliced-genomic PX domain containing protein, expressed| Length = 8148 Score = 26.7 bits (52), Expect(2) = 1.1 Identities = 9/16 (56%), Positives = 10/16 (62%) Frame = +1 / +2 Query: 472 KATAIHKFVTRCNCCC 519 KAT H V +C CCC Sbjct: 3449 KATF*H*VVEKCTCCC 3496 Score = 24.0 bits (46), Expect(2) = 1.1 Identities = 7/12 (58%), Positives = 10/12 (83%) Frame = +2 / +1 Query: 404 FCMLQCQSLHAV 439 FC ++CQ LH+V Sbjct: 3337 FCFVRCQILHSV 3372
>LOC_Os11g12740:12011.t01161:unspliced-genomic peptide transporter PTR2, putative, expressed| Length = 5313 Score = 33.6 bits (67), Expect = 1.1 Identities = 15/33 (45%), Positives = 16/33 (48%) Frame = +1 / +2 Query: 7 CRGE*RRVRKRDARMACAWCVSDQASFPMTPSW 105 C RR R R CAWC S +A TPSW Sbjct: 4010 CGRRARRRRWSR*RCYCAWCPSSRAPSSSTPSW 4108
>LOC_Os04g49520:12004.t04466:unspliced-genomic pentatricopeptide repeat protein PPR868-14, putative, expressed| Length = 3655 Score = 33.6 bits (67), Expect = 1.1 Identities = 18/56 (32%), Positives = 30/56 (53%) Frame = -2 / -3 Query: 409 AESSFHSENKLIAFGGLGLPDRTVASSSLCFAASRAALELIYVDPSVMRAPHLEEI 242 AESS ++ I + LP+ +SS+ CFAA+ A+ L + ++ RAP + Sbjct: 2180 AESSDFPASEYILARSM*LPESGESSSNTCFAANSASSSLPCILQALRRAPQTSAV 2013
>LOC_Os06g06730:12006.t00558:unspliced-genomic S-adenosylmethionine-dependent methyltransferase, putative,| expressed Length = 4157 Score = 25.8 bits (50), Expect(2) = 1.2 Identities = 13/31 (41%), Positives = 16/31 (51%) Frame = -2 / +3 Query: 382 KLIAFGGLGLPDRTVASSSLCFAASRAALEL 290 K +FG + P + SSS A SR AL L Sbjct: 492 KCSSFGSMSKPTKQHTSSSRFMAKSRVALPL 584 Score = 24.9 bits (48), Expect(2) = 1.2 Identities = 10/22 (45%), Positives = 13/22 (59%) Frame = -3 / +1 Query: 564 FFFFETCKLN*FNRAAAAVTPC 499 FFF C+ N +AAA+ PC Sbjct: 451 FFFLL*CEWNWATSSAAALVPC 516
>LOC_Os09g29150:12009.t02593:unspliced-genomic hypothetical protein| Length = 660 Score = 29.5 bits (58), Expect(2) = 1.9 Identities = 12/21 (57%), Positives = 13/21 (61%) Frame = +2 / +2 Query: 5 VVEGNDAGSERETLAWRARGA 67 VV G+D G RE WR RGA Sbjct: 65 VVVGSDGGGGREWQRWRQRGA 127 Score = 22.1 bits (42), Expect(2) = 1.9 Identities = 9/24 (37%), Positives = 12/24 (50%) Frame = +3 / +2 Query: 297 RAALLAAKQREELATVRSGSPRPP 368 R A+ ++ A S SPRPP Sbjct: 119 RGAVACSRGAATAAETSSASPRPP 190
>LOC_Os11g37690:12011.t03309:unspliced-genomic TBC domain containing protein, expressed| Length = 4006 Score = 32.7 bits (65), Expect = 2.1 Identities = 13/44 (29%), Positives = 19/44 (43%) Frame = +1 / +2 Query: 427 PACCECQI*VQTFSIKATAIHKFVTRCNCCCGTVKLIQFARFKK 558 P C C I ++ +H +VT+ CC + F R KK Sbjct: 2171 PPACHCSIVPALINVPNFCVHVYVTQALMCCALIDPWCFMRTKK 2302
>LOC_Os11g30760:12011.t02677:unspliced-genomic expressed protein| Length = 1010 Score = 32.7 bits (65), Expect = 2.1 Identities = 17/43 (39%), Positives = 20/43 (46%) Frame = +3 / -1 Query: 234 *RRISSRCGARMTDGST*INSRAALLAAKQREELATVRSGSPR 362 *RR +RCG R GS R A ++R T RSG R Sbjct: 503 *RRRRARCGGRRRRGSRRRRGRGGTAAGRRRRSSRTPRSGGAR 375
>LOC_Os08g09840:12008.t00869:unspliced-genomic transposon protein, putative, unclassified| Length = 2867 Score = 32.7 bits (65), Expect = 2.1 Identities = 13/51 (25%), Positives = 23/51 (45%) Frame = +2 / -2 Query: 155 CLCPCGLKQNRRPWPACS*PRLMMIGIEKDFFKMRRTHDRWVDINQLQSSS 307 C+CPC + Q+ + P S P ++ I+ + TH + +SS Sbjct: 313 CVCPCKMFQHLQCMPLFSGPHSLLGHIDSGIISLETTHPELYSVRSSSNSS 161
>LOC_Os07g35280:12007.t03203:unspliced-genomic receptor-like protein kinase homolog RK20-1, putative, expressed| Length = 4681 Score = 32.7 bits (65), Expect = 2.1 Identities = 18/48 (37%), Positives = 23/48 (47%) Frame = -2 / +3 Query: 463 MFAPRSDIHSMQALTLQHAESSFHSENKLIAFGGLGLPDRTVASSSLC 320 +FAPRS S AL + + L A GG+G P TV +LC Sbjct: 153 VFAPRSTYQSNLALLSAGLAKNASASPALFAAGGVGDPPDTVYGLALC 296
>LOC_Os04g32160:12004.t02895:unspliced-genomic conserved hypothetical protein| Length = 2957 Score = 24.0 bits (46), Expect(3) = 2.3 Identities = 8/15 (53%), Positives = 11/15 (73%) Frame = -2 / -1 Query: 226 HHQPWLAAGRPGSSV 182 HH+P LAAG G+ + Sbjct: 2501 HHEPLLAAGGAGAGL 2457 Score = 24.0 bits (46), Expect(3) = 2.3 Identities = 8/16 (50%), Positives = 9/16 (56%) Frame = -1 / -3 Query: 65 HHAHAMRASLFRTRRH 18 HH H + L R RRH Sbjct: 48 HHGHLLGLLLLRRRRH 1 Score = 23.5 bits (45), Expect(3) = 2.3 Identities = 8/16 (50%), Positives = 9/16 (56%) Frame = -3 / -2 Query: 174 RPHGQRHRWSSQEHRR 127 RPH RH + HRR Sbjct: 448 RPHSHRHPARRRRHRR 401
>LOC_Os01g58444:12001.t006874:unspliced-genomic expressed protein| Length = 3811 Score = 29.9 bits (59), Expect(2) = 2.9 Identities = 11/21 (52%), Positives = 14/21 (66%) Frame = -3 / +1 Query: 531 FNRAAAAVTPCYKLVNCSCLD 469 F R+AA+ TPC V C+C D Sbjct: 2407 FCRSAASSTPCGTPVKCACFD 2469 Score = 23.5 bits (45), Expect(2) = 2.9 Identities = 12/27 (44%), Positives = 15/27 (55%) Frame = -3 / +3 Query: 243 SFSIPIIISLG*LQAGQGRLFCFRPHG 163 SFSI + IS + G+LF F HG Sbjct: 2634 SFSIKLSISSFTFISHPGKLFLFPSHG 2714
>LOC_Os01g08020:12001.t00680:unspliced-genomic boron transporter-like protein 2, putative, expressed| Length = 5983 Score = 32.2 bits (64), Expect = 3.0 Identities = 10/14 (71%), Positives = 11/14 (78%) Frame = -3 / +2 Query: 483 CSCLDTECLHLDLT 442 C C D ECLH+DLT Sbjct: 437 CRCRDVECLHMDLT 478
>LOC_Os06g03280:12006.t00221:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 2811 Score = 29.5 bits (58), Expect(2) = 3.0 Identities = 10/21 (47%), Positives = 13/21 (61%) Frame = -2 / +3 Query: 229 NHHQPWLAAGRPGSSVLFQTT 167 NH +PW+ AG G + LF T Sbjct: 393 NHRRPWVKAGS*GFTALFNNT 455 Score = 23.5 bits (45), Expect(2) = 3.0 Identities = 7/11 (63%), Positives = 9/11 (81%) Frame = -3 / +1 Query: 153 RWSSQEHRRCR 121 RWS+ + RRCR Sbjct: 1081 RWSALQRRRCR 1113
>LOC_Os08g17240:12008.t01595:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 1910 Score = 31.8 bits (63), Expect = 4.1 Identities = 12/51 (23%), Positives = 23/51 (45%) Frame = -1 / +1 Query: 197 ARVVCFVSDHMDRGTGGAHKNTGDAESVNLNHDGVMGNEAWSETHHAHAMR 45 + V C V + + +A + N++G + E W E +HAH ++ Sbjct: 793 SHVTCEVCSNTGHSRNDCSETREEAIYMGNNNNGTVHKEIWGENNHAHIIK 945
>LOC_Os08g13790:12008.t01255:unspliced-genomic hypothetical protein| Length = 483 Score = 31.8 bits (63), Expect = 4.1 Identities = 11/18 (61%), Positives = 12/18 (66%) Frame = -3 / -3 Query: 174 RPHGQRHRWSSQEHRRCR 121 RP G RH W + EHRR R Sbjct: 409 RP*GHRHHWGTAEHRRPR 356
>LOC_Os07g35240:12007.t03199:unspliced-genomic transposon protein, putative, CACTA, En/Spm sub-class| Length = 6685 Score = 31.8 bits (63), Expect = 4.1 Identities = 10/22 (45%), Positives = 13/22 (59%) Frame = +2 / +1 Query: 143 ELHLCLCPCGLKQNRRPWPACS 208 ELH C C + + + WPACS Sbjct: 5662 ELHACRAVCVVLEGSKSWPACS 5727
>LOC_Os03g10600:12003.t00861:unspliced-genomic expressed protein| Length = 6092 Score = 31.8 bits (63), Expect = 4.1 Identities = 19/59 (32%), Positives = 26/59 (44%) Frame = +1 / +1 Query: 283 HKSTPEQLYLQQSKEKS*LQFDQVVQDHQKLSAYFQNESWILHAAMSEPACCECQI*VQ 459 H +T L +S EKS LQF + + + + FQN W+L E CQ Q Sbjct: 1312 HGATSSVCMLSKSNEKSYLQFW*RISRVEAILSIFQNFWWLLSDLAFEVCSGTCQFVTQ 1488
>LOC_Os01g59250:12001.t05315:unspliced-genomic expressed protein| Length = 3373 Score = 31.8 bits (63), Expect = 4.1 Identities = 10/22 (45%), Positives = 13/22 (59%) Frame = +2 / +1 Query: 143 ELHLCLCPCGLKQNRRPWPACS 208 ELH C C + + + WPACS Sbjct: 283 ELHACRAVCVVLEGSKSWPACS 348
>LOC_Os06g31850:12006.t02884:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 3736 Score = 29.9 bits (59), Expect(2) = 5.1 Identities = 10/21 (47%), Positives = 13/21 (61%) Frame = -2 / +3 Query: 229 NHHQPWLAAGRPGSSVLFQTT 167 NH +PW+ AG G + LF T Sbjct: 393 NHRRPWVKAGSCGFTALFNNT 455 Score = 22.6 bits (43), Expect(2) = 5.1 Identities = 7/11 (63%), Positives = 8/11 (72%) Frame = -3 / +2 Query: 153 RWSSQEHRRCR 121 RWS+ RRCR Sbjct: 1079 RWSALRRRRCR 1111
>LOC_Os04g05240:12004.t00406:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 2718 Score = 29.5 bits (58), Expect(2) = 5.2 Identities = 10/21 (47%), Positives = 13/21 (61%) Frame = -2 / +3 Query: 229 NHHQPWLAAGRPGSSVLFQTT 167 NH +PW+ AG G + LF T Sbjct: 393 NHRRPWVKAGS*GFTALFNNT 455 Score = 22.6 bits (43), Expect(2) = 5.2 Identities = 7/11 (63%), Positives = 8/11 (72%) Frame = -3 / +2 Query: 153 RWSSQEHRRCR 121 RWS+ RRCR Sbjct: 1079 RWSALRRRRCR 1111
>LOC_Os08g11280:12008.t01010:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 2810 Score = 29.5 bits (58), Expect(2) = 5.3 Identities = 10/21 (47%), Positives = 13/21 (61%) Frame = -2 / +3 Query: 229 NHHQPWLAAGRPGSSVLFQTT 167 NH +PW+ AG G + LF T Sbjct: 393 NHRRPWVKAGS*GFTALFNNT 455 Score = 22.6 bits (43), Expect(2) = 5.3 Identities = 7/11 (63%), Positives = 8/11 (72%) Frame = -3 / +1 Query: 153 RWSSQEHRRCR 121 RWS+ RRCR Sbjct: 1078 RWSALRRRRCR 1110
>LOC_Os12g13400:12012.t01208:unspliced-genomic expressed protein| Length = 1665 Score = 31.3 bits (62), Expect = 5.6 Identities = 13/33 (39%), Positives = 16/33 (48%) Frame = -3 / +3 Query: 192 GRLFCFRPHGQRHRWSSQEHRRCRVREPEP*WS 94 GR RP +R RW + RRC R P W+ Sbjct: 243 GRRPRHRPRRRRRRWCMEPARRCPDRRGRPPWT 341
>LOC_Os11g24824:12011.t004371:unspliced-genomic expressed protein| Length = 8644 Score = 31.3 bits (62), Expect = 5.6 Identities = 14/41 (34%), Positives = 23/41 (56%) Frame = -1 / +2 Query: 239 SLFQSSSALASCRQARVVCFVSDHMDRGTGGAHKNTGDAES 117 S +++SS +SCR+ R C S +GG++ GD +S Sbjct: 911 SSWRTSSGSSSCRRRRSSCRRSRTTSANSGGSNSRHGDEQS 1033 Score = 31.3 bits (62), Expect = 5.6 Identities = 14/41 (34%), Positives = 23/41 (56%) Frame = -1 / +3 Query: 239 SLFQSSSALASCRQARVVCFVSDHMDRGTGGAHKNTGDAES 117 S +++SS +SCR+ R C S +GG++ GD +S Sbjct: 6360 SSWRTSSGSSSCRRRRSSCRRSRTTSANSGGSNSRHGDEQS 6482
>LOC_Os11g09979:12011.t004387:unspliced-genomic expressed protein| Length = 5737 Score = 31.3 bits (62), Expect = 5.6 Identities = 15/44 (34%), Positives = 18/44 (40%) Frame = -1 / -1 Query: 197 ARVVCFVSDHMDRGTGGAHKNTGDAESVNLNHDGVMGNEAWSET 66 A V D G G A + TGD S + +H G W ET Sbjct: 529 AEVAALGDDDGGDGGGDAARRTGDVRSPSPDHMGARSGRWWPET 398
>LOC_Os10g06440:12010.t00513:unspliced-genomic transposon protein, putative, unclassified| Length = 2275 Score = 31.3 bits (62), Expect = 5.6 Identities = 10/18 (55%), Positives = 13/18 (72%) Frame = -2 / -1 Query: 229 NHHQPWLAAGRPGSSVLF 176 NHH+PW+ AG G + LF Sbjct: 1624 NHHRPWVKAGSCGFTALF 1571
>LOC_Os10g06190:12010.t00488:unspliced-genomic transposon protein, putative, unclassified| Length = 1318 Score = 31.3 bits (62), Expect = 5.6 Identities = 10/18 (55%), Positives = 13/18 (72%) Frame = -2 / +3 Query: 229 NHHQPWLAAGRPGSSVLF 176 NHH+PW+ AG G + LF Sbjct: 393 NHHRPWVKAGSCGFTALF 446
>LOC_Os06g50240:12006.t04708:unspliced-genomic SCUTL1, putative, expressed| Length = 2921 Score = 31.3 bits (62), Expect = 5.6 Identities = 15/33 (45%), Positives = 16/33 (48%) Frame = -3 / -2 Query: 201 AGQGRLFCFRPHGQRHRWSSQEHRRCRVREPEP 103 A Q C RP G R R + RRCR RE P Sbjct: 637 APQASAGCTRPRG*RRRSHRRRRRRCRRRE*TP 539
>LOC_Os05g17910:12005.t01560:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 4645 Score = 31.3 bits (62), Expect = 5.6 Identities = 10/17 (58%), Positives = 13/17 (76%) Frame = -2 / +1 Query: 229 NHHQPWLAAGRPGSSVL 179 NHH+PW+ AG GS+ L Sbjct: 391 NHHRPWVKAGSCGSTAL 441
>LOC_Os02g52070:12002.t04788:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 3137 Score = 31.3 bits (62), Expect = 5.6 Identities = 14/30 (46%), Positives = 17/30 (56%) Frame = +2 / -1 Query: 2 MVVEGNDAGSERETLAWRARGAFRTRLHSP 91 +VV GSE AWRAR A +R +SP Sbjct: 1673 VVVPSGGVGSEVWQAAWRARAASASRTYSP 1584
>LOC_Os01g49840:12001.t04422:unspliced-genomic hypothetical protein| Length = 288 Score = 31.3 bits (62), Expect = 5.6 Identities = 9/17 (52%), Positives = 13/17 (76%) Frame = -1 / -3 Query: 113 NLNHDGVMGNEAWSETH 63 N++HD V+G+ WSE H Sbjct: 76 NVHHDAVLGSRTWSERH 26
>LOC_Os12g25540:12012.t02274:unspliced-genomic conserved hypothetical protein| Length = 522 Score = 25.4 bits (49), Expect(2) = 5.9 Identities = 8/19 (42%), Positives = 11/19 (57%) Frame = -3 / -1 Query: 168 HGQRHRWSSQEHRRCRVRE 112 H RHR + HR CR+ + Sbjct: 489 HRDRHRARRRHHRACRLHQ 433 Score = 23.1 bits (44), Expect(2) = 5.9 Identities = 9/18 (50%), Positives = 9/18 (50%) Frame = -1 / -3 Query: 65 HHAHAMRASLFRTRRHSP 12 HHA R R RRH P Sbjct: 397 HHARRRRHRARRQRRHPP 344
>LOC_Os06g32390:12006.t02937:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 3505 Score = 29.5 bits (58), Expect(2) = 6.4 Identities = 10/21 (47%), Positives = 13/21 (61%) Frame = -2 / +1 Query: 229 NHHQPWLAAGRPGSSVLFQTT 167 NH +PW+ AG G + LF T Sbjct: 394 NHRRPWVKAGS*GFTALFNNT 456 Score = 22.6 bits (43), Expect(2) = 6.4 Identities = 7/11 (63%), Positives = 8/11 (72%) Frame = -3 / +2 Query: 153 RWSSQEHRRCR 121 RWS+ RRCR Sbjct: 1082 RWSALRRRRCR 1114
>LOC_Os01g47960:12001.t04242:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 3651 Score = 29.5 bits (58), Expect(2) = 6.7 Identities = 10/21 (47%), Positives = 13/21 (61%) Frame = -2 / +3 Query: 229 NHHQPWLAAGRPGSSVLFQTT 167 NH +PW+ AG G + LF T Sbjct: 393 NHRRPWVKAGS*GFTALFNNT 455 Score = 22.6 bits (43), Expect(2) = 6.7 Identities = 7/11 (63%), Positives = 8/11 (72%) Frame = -3 / +3 Query: 153 RWSSQEHRRCR 121 RWS+ RRCR Sbjct: 1080 RWSALRRRRCR 1112
>LOC_Os05g37410:12005.t03284:unspliced-genomic hhH-GPD superfamily base excision DNA repair protein, expressed| Length = 10616 Score = 29.0 bits (57), Expect(2) = 6.8 Identities = 13/30 (43%), Positives = 19/30 (63%) Frame = +3 / +1 Query: 81 FIPHDSIMVQVHGLGIAGVLVSSTCASVHV 170 F+P D+ + Q++G IAG VSS AS + Sbjct: 4858 FMPFDAHLAQMNGNMIAGTNVSSALASTEL 4947 Score = 24.4 bits (47), Expect(2) = 6.8 Identities = 10/33 (30%), Positives = 16/33 (48%) Frame = +2 / +2 Query: 404 FCMLQCQSLHAVNVRSRCKHSVSRQLQFTSL*H 502 FC + +A +RS CKH S ++ + H Sbjct: 6950 FCTKSKPNCNACPMRSECKHFASAFARYYDICH 7048
>LOC_Os02g53540:12002.t04933:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 3292 Score = 24.4 bits (47), Expect(2) = 6.9 Identities = 11/22 (50%), Positives = 15/22 (68%) Frame = +3 / +2 Query: 288 INSRAALLAAKQREELATVRSG 353 +N RAA L A+++E A RSG Sbjct: 2639 LNQRAAELEAREKELDARARSG 2704 Score = 23.5 bits (45), Expect(2) = 6.9 Identities = 7/12 (58%), Positives = 9/12 (75%) Frame = +2 / +3 Query: 164 PCGLKQNRRPWP 199 P G + +RRPWP Sbjct: 2505 PSGSELSRRPWP 2540
>LOC_Os10g16990:12010.t003605:unspliced-genomic expressed protein| Length = 3239 Score = 30.9 bits (61), Expect = 7.7 Identities = 13/40 (32%), Positives = 22/40 (55%) Frame = +2 / +1 Query: 344 SIR*SKTTKSYQLIFRMKAGFCMLQCQSLHAVNVRSRCKH 463 +I+ T SYQ+IF + + C L +LH V + +C + Sbjct: 2149 TIKLPNTLFSYQMIFYVSSSLCALLVFALHCVFLSYKCSN 2268
>LOC_Os10g11420:12010.t00940:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 1741 Score = 30.9 bits (61), Expect = 7.7 Identities = 10/21 (47%), Positives = 13/21 (61%) Frame = -2 / +2 Query: 229 NHHQPWLAAGRPGSSVLFQTT 167 NHH+PW+ AG G + L T Sbjct: 470 NHHRPWVKAGSCGFTALINNT 532
>LOC_Os10g06300:12010.t00499:unspliced-genomic hypothetical protein| Length = 4626 Score = 30.9 bits (61), Expect = 7.7 Identities = 10/21 (47%), Positives = 13/21 (61%) Frame = -2 / -1 Query: 229 NHHQPWLAAGRPGSSVLFQTT 167 NHH+PW+ AG G + L T Sbjct: 1368 NHHRPWVKAGSCGFTTLINNT 1306
>LOC_Os05g17320:12005.t01501:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 6749 Score = 30.9 bits (61), Expect = 7.7 Identities = 10/21 (47%), Positives = 13/21 (61%) Frame = -2 / +3 Query: 229 NHHQPWLAAGRPGSSVLFQTT 167 NHH+PW+ AG G + L T Sbjct: 468 NHHRPWVKAGSCGFTALINNT 530
>LOC_Os03g14690:12003.t01256:unspliced-genomic vacuolar ATP synthase 91 kDa subunit, putative, expressed| Length = 7042 Score = 30.9 bits (61), Expect = 7.7 Identities = 10/18 (55%), Positives = 13/18 (72%) Frame = -3 / +3 Query: 531 FNRAAAAVTPCYKLVNCS 478 FNR A+ PCY L+NC+ Sbjct: 4341 FNRQRHAIIPCYLLLNCA 4394
>LOC_Os01g65890:12001.t05950:unspliced-genomic DNA repair metallo-beta-lactamase family protein, expressed| Length = 3826 Score = 30.9 bits (61), Expect = 7.7 Identities = 11/38 (28%), Positives = 19/38 (50%) Frame = -2 / -3 Query: 325 LCFAASRAALELIYVDPSVMRAPHLEEILLYSNHHQPW 212 LC+ + I+ P+V R + E+ L H++PW Sbjct: 902 LCYVLQWQIMYTIWRQPTVPRVQNATELTLEQEHNRPW 789
>LOC_Os01g53570:12001.t04776:unspliced-genomic ALMT1, putative, expressed| Length = 2500 Score = 30.9 bits (61), Expect = 7.7 Identities = 14/40 (35%), Positives = 19/40 (47%) Frame = -1 / -1 Query: 131 GDAESVNLNHDGVMGNEAWSETHHAHAMRASLFRTRRHSP 12 G A++V+ +HD +G E E R L RRH P Sbjct: 1042 GLADAVDRHHDEAVGEEDHPEAVLIRRQRRQLLHERRHGP 923
>LOC_Os01g39600:12001.t03487:unspliced-genomic ATP binding protein, putative, expressed| Length = 4133 Score = 30.9 bits (61), Expect = 7.7 Identities = 11/23 (47%), Positives = 14/23 (60%) Frame = +2 / -1 Query: 149 HLCLCPCGLKQNRRPWPACS*PR 217 HL +CPC ++ R P CS PR Sbjct: 1997 HLAMCPCTWPRSCRSSPKCSAPR 1929
>LOC_Os11g45790:12011.t04106:unspliced-genomic MLA6 protein, putative, expressed| Length = 3545 Score = 25.8 bits (50), Expect(3) = 9.4 Identities = 8/17 (47%), Positives = 11/17 (64%) Frame = -2 / +3 Query: 91 WGMKPGPKRTTRTPCER 41 WG P P+R+T T +R Sbjct: 717 WGRPPSPRRSTMTLAQR 767 Score = 22.1 bits (42), Expect(3) = 9.4 Identities = 9/25 (36%), Positives = 13/25 (52%) Frame = -2 / +2 Query: 451 RSDIHSMQALTLQHAESSFHSENKL 377 RSD H+ A+ HAE E+ + Sbjct: 269 RSDAHARTAVARLHAEEMLDLEHDI 343 Score = 21.7 bits (41), Expect(3) = 9.4 Identities = 12/32 (37%), Positives = 13/32 (40%) Frame = -2 / +1 Query: 298 LELIYVDPSVMRAPHLEEILLYSNHHQPWLAA 203 LEL DP AP + HHQ AA Sbjct: 457 LELQ*RDPEAEEAPQRSAAAGHQQHHQSESAA 552 Database: tigr.seq.out Posted date: Jul 20, 2007 8:58 AM Number of letters in database: 166,841,660 Number of sequences in database: 56,278 Lambda K H 0.318 0.134 0.401 Matrix: BLOSUM62 Number of Sequences: 56278 Number of Hits to DB: 249,398,634 Number of extensions: 4199686 Number of successful extensions: 20918 Number of sequences better than 10.0: 46 Length of query: 188 Length of database: 55,613,886 Length adjustment: 48 Effective length of query: 140 Effective length of database: 52,912,542 Effective search space: 7407755880 Effective search space used: 7407755880 Neighboring words threshold: 13 Window for multiple hits: 40 X1: 16 ( 7.3 bits)
