| Clone Name | FLbaf148e23 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY551229.1| Oryza sativa precursor microRNA 166g gene, complete sequence Length = 100 Score = 58.0 bits (29), Expect = 4e-05 Identities = 29/29 (100%) Strand = Plus / Plus Query: 69 ttcggaccaggcttcattccccatgactc 97 ||||||||||||||||||||||||||||| Sbjct: 63 ttcggaccaggcttcattccccatgactc 91
>gb|AC096855.5| Oryza sativa chromosome 3 BAC OJ1365_D05 genomic sequence, complete sequence Length = 163972 Score = 58.0 bits (29), Expect = 4e-05 Identities = 29/29 (100%) Strand = Plus / Plus Query: 69 ttcggaccaggcttcattccccatgactc 97 ||||||||||||||||||||||||||||| Sbjct: 123536 ttcggaccaggcttcattccccatgactc 123564
>gb|AC117988.3| Oryza sativa chromosome 3 BAC OSJNBa0057G07 genomic sequence, complete sequence Length = 155106 Score = 58.0 bits (29), Expect = 4e-05 Identities = 29/29 (100%) Strand = Plus / Plus Query: 69 ttcggaccaggcttcattccccatgactc 97 ||||||||||||||||||||||||||||| Sbjct: 7392 ttcggaccaggcttcattccccatgactc 7420
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 58.0 bits (29), Expect = 4e-05 Identities = 29/29 (100%) Strand = Plus / Minus Query: 69 ttcggaccaggcttcattccccatgactc 97 ||||||||||||||||||||||||||||| Sbjct: 30191781 ttcggaccaggcttcattccccatgactc 30191753 Score = 48.1 bits (24), Expect = 0.034 Identities = 24/24 (100%) Strand = Plus / Plus Query: 67 gtttcggaccaggcttcattcccc 90 |||||||||||||||||||||||| Sbjct: 3469662 gtttcggaccaggcttcattcccc 3469685
>emb|CT835285.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN076N07, full insert sequence Length = 586 Score = 48.1 bits (24), Expect = 0.034 Identities = 24/24 (100%) Strand = Plus / Plus Query: 67 gtttcggaccaggcttcattcccc 90 |||||||||||||||||||||||| Sbjct: 121 gtttcggaccaggcttcattcccc 144
>gb|AC104428.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1123F12, complete sequence Length = 103330 Score = 48.1 bits (24), Expect = 0.034 Identities = 24/24 (100%) Strand = Plus / Minus Query: 67 gtttcggaccaggcttcattcccc 90 |||||||||||||||||||||||| Sbjct: 40824 gtttcggaccaggcttcattcccc 40801
>gb|AC189313.1| Brassica rapa subsp. pekinensis clone KBrB034N10, complete sequence Length = 130281 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 68 tttcggaccaggcttcattcccc 90 ||||||||||||||||||||||| Sbjct: 4655 tttcggaccaggcttcattcccc 4677 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 70 tcggaccaggcttcattcccc 90 ||||||||||||||||||||| Sbjct: 1473 tcggaccaggcttcattcccc 1493
>gb|DQ958762.1| Arabidopsis thaliana small RNA Ath_wt_08206, complete sequence Length = 22 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Plus Query: 69 ttcggaccaggcttcattcccc 90 |||||||||||||||||||||| Sbjct: 1 ttcggaccaggcttcattcccc 22
>gb|DQ955629.1| Arabidopsis thaliana small RNA Ath_wt_05073, complete sequence Length = 23 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Plus Query: 69 ttcggaccaggcttcattcccc 90 |||||||||||||||||||||| Sbjct: 1 ttcggaccaggcttcattcccc 22
>gb|DQ929249.1| Arabidopsis thaliana small RNA AGO1_1926, complete sequence Length = 22 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Plus Query: 69 ttcggaccaggcttcattcccc 90 |||||||||||||||||||||| Sbjct: 1 ttcggaccaggcttcattcccc 22
>emb|AL442108.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0124E07, complete sequence Length = 127181 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Plus Query: 313 cagcaaagcaaagagaagagctagct 338 ||||||||||||||||||||| |||| Sbjct: 30456 cagcaaagcaaagagaagagccagct 30481
>gb|AC140029.19| Medicago truncatula clone mth2-20g24, complete sequence Length = 124043 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Plus Query: 69 ttcggaccaggcttcattcccc 90 |||||||||||||||||||||| Sbjct: 70351 ttcggaccaggcttcattcccc 70372 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 70 tcggaccaggcttcattcccc 90 ||||||||||||||||||||| Sbjct: 70560 tcggaccaggcttcattcccc 70580
>gb|AC006009.2| Homo sapiens PAC clone RP5-850I1 from 7, complete sequence Length = 93942 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Minus Query: 366 ccaaaagctatcagcttatttt 387 |||||||||||||||||||||| Sbjct: 63636 ccaaaagctatcagcttatttt 63615
>gb|AC005819.3| Arabidopsis thaliana chromosome 2 clone T3A4 map CIC06C03, complete sequence Length = 55870 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Plus Query: 69 ttcggaccaggcttcattcccc 90 |||||||||||||||||||||| Sbjct: 30803 ttcggaccaggcttcattcccc 30824
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Plus Query: 313 cagcaaagcaaagagaagagctagct 338 ||||||||||||||||||||| |||| Sbjct: 6257916 cagcaaagcaaagagaagagccagct 6257941
>emb|AL606989.3|OSJN00120 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0033G08, complete sequence Length = 121591 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Plus Query: 313 cagcaaagcaaagagaagagctagct 338 ||||||||||||||||||||| |||| Sbjct: 27582 cagcaaagcaaagagaagagccagct 27607
>gb|DQ964064.1| Arabidopsis thaliana small RNA Ath_wt_13508, complete sequence Length = 22 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 70 tcggaccaggcttcattcccc 90 ||||||||||||||||||||| Sbjct: 2 tcggaccaggcttcattcccc 22
>emb|CT836310.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN027M21, full insert sequence Length = 1151 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 70 tcggaccaggcttcattcccc 90 ||||||||||||||||||||| Sbjct: 478 tcggaccaggcttcattcccc 498
>gb|DQ955587.1| Arabidopsis thaliana small RNA Ath_wt_05031, complete sequence Length = 22 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 70 tcggaccaggcttcattcccc 90 ||||||||||||||||||||| Sbjct: 1 tcggaccaggcttcattcccc 21
>gb|DQ954890.1| Arabidopsis thaliana small RNA Ath_wt_04334, complete sequence Length = 21 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 69 ttcggaccaggcttcattccc 89 ||||||||||||||||||||| Sbjct: 1 ttcggaccaggcttcattccc 21
>gb|DQ954379.1| Arabidopsis thaliana small RNA Ath_wt_03823, complete sequence Length = 21 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 70 tcggaccaggcttcattcccc 90 ||||||||||||||||||||| Sbjct: 1 tcggaccaggcttcattcccc 21
>gb|DQ952977.1| Arabidopsis thaliana small RNA Ath_wt_02421, complete sequence Length = 22 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 70 tcggaccaggcttcattcccc 90 ||||||||||||||||||||| Sbjct: 1 tcggaccaggcttcattcccc 21
>gb|DQ938777.1| Arabidopsis thaliana small RNA AGO4_04855, complete sequence Length = 21 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 70 tcggaccaggcttcattcccc 90 ||||||||||||||||||||| Sbjct: 1 tcggaccaggcttcattcccc 21
>gb|DQ930531.1| Arabidopsis thaliana small RNA AGO1_3208, complete sequence Length = 22 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 70 tcggaccaggcttcattcccc 90 ||||||||||||||||||||| Sbjct: 2 tcggaccaggcttcattcccc 22
>gb|DQ929384.1| Arabidopsis thaliana small RNA AGO1_2061, complete sequence Length = 22 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 70 tcggaccaggcttcattcccc 90 ||||||||||||||||||||| Sbjct: 1 tcggaccaggcttcattcccc 21
>gb|DQ928819.1| Arabidopsis thaliana small RNA AGO1_1496, complete sequence Length = 22 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 70 tcggaccaggcttcattcccc 90 ||||||||||||||||||||| Sbjct: 1 tcggaccaggcttcattcccc 21
>gb|DQ927947.1| Arabidopsis thaliana small RNA AGO1_0624, complete sequence Length = 21 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 70 tcggaccaggcttcattcccc 90 ||||||||||||||||||||| Sbjct: 1 tcggaccaggcttcattcccc 21
>gb|DQ927914.1| Arabidopsis thaliana small RNA AGO1_0591, complete sequence Length = 21 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 69 ttcggaccaggcttcattccc 89 ||||||||||||||||||||| Sbjct: 1 ttcggaccaggcttcattccc 21
>dbj|AK240806.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J065006G24, full insert sequence Length = 1299 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 70 tcggaccaggcttcattcccc 90 ||||||||||||||||||||| Sbjct: 185 tcggaccaggcttcattcccc 205
>gb|AC189591.1| Brassica rapa subsp. pekinensis clone KBrH013D23, complete sequence Length = 132897 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 70 tcggaccaggcttcattcccc 90 ||||||||||||||||||||| Sbjct: 82481 tcggaccaggcttcattcccc 82501
>gb|AC144592.26| Medicago truncatula clone mth2-23m13, complete sequence Length = 139267 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 70 tcggaccaggcttcattcccc 90 ||||||||||||||||||||| Sbjct: 52630 tcggaccaggcttcattcccc 52610
>gb|AC129219.3| Mus musculus BAC clone RP24-474C15 from chromosome 14, complete sequence Length = 195935 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 314 agcaaagcaaagagaagagctagct 338 |||||||||||||||||| |||||| Sbjct: 59576 agcaaagcaaagagaagacctagct 59552
>gb|AC027660.2| Oryza sativa (japonica cultivar-group) chromosome 10 clone BAC nbxb0045B21, complete sequence Length = 152397 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 70 tcggaccaggcttcattcccc 90 ||||||||||||||||||||| Sbjct: 136643 tcggaccaggcttcattcccc 136623
>gb|AC148487.14| Medicago truncatula clone mth2-57f20, complete sequence Length = 119671 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 70 tcggaccaggcttcattcccc 90 ||||||||||||||||||||| Sbjct: 34737 tcggaccaggcttcattcccc 34757
>gb|AY599420.1| Nicotiana sylvestris microRNA MIR166a gene, complete sequence Length = 521 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 70 tcggaccaggcttcattcccc 90 ||||||||||||||||||||| Sbjct: 162 tcggaccaggcttcattcccc 182
>gb|AY501434.1| Zea mays microRNA 166d precursor, transcript, partial sequence Length = 294 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 70 tcggaccaggcttcattcccc 90 ||||||||||||||||||||| Sbjct: 5 tcggaccaggcttcattcccc 25
>gb|AY501433.1| Zea mays microRNA 166c precursor, transcript, partial sequence Length = 300 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 70 tcggaccaggcttcattcccc 90 ||||||||||||||||||||| Sbjct: 5 tcggaccaggcttcattcccc 25
>gb|AY501432.1| Zea mays microRNA 166b gene, complete sequence Length = 391 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 70 tcggaccaggcttcattcccc 90 ||||||||||||||||||||| Sbjct: 99 tcggaccaggcttcattcccc 119
>gb|AY501431.1| Zea mays microRNA 166a gene, complete sequence Length = 589 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 70 tcggaccaggcttcattcccc 90 ||||||||||||||||||||| Sbjct: 189 tcggaccaggcttcattcccc 209
>gb|AY551230.1| Oryza sativa precursor microRNA 166h gene, complete sequence Length = 220 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 70 tcggaccaggcttcattcccc 90 ||||||||||||||||||||| Sbjct: 176 tcggaccaggcttcattcccc 196
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10 Length = 22685906 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 70 tcggaccaggcttcattcccc 90 ||||||||||||||||||||| Sbjct: 13968017 tcggaccaggcttcattcccc 13967997 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 70 tcggaccaggcttcattcccc 90 ||||||||||||||||||||| Sbjct: 19468090 tcggaccaggcttcattcccc 19468110
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6 Length = 30731886 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 70 tcggaccaggcttcattcccc 90 ||||||||||||||||||||| Sbjct: 29811221 tcggaccaggcttcattcccc 29811201
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2 Length = 35954743 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 70 tcggaccaggcttcattcccc 90 ||||||||||||||||||||| Sbjct: 26148642 tcggaccaggcttcattcccc 26148662
>emb|AL590346.1|ATT2K12 Arabidopsis thaliana DNA chromosome 5, BAC clone T2K12 (ESSA project) Length = 82896 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 70 tcggaccaggcttcattcccc 90 ||||||||||||||||||||| Sbjct: 40192 tcggaccaggcttcattcccc 40212 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 70 tcggaccaggcttcattcccc 90 ||||||||||||||||||||| Sbjct: 42163 tcggaccaggcttcattcccc 42183
>gb|AC096674.3| Homo sapiens chromosome 1 clone RP11-59A2, complete sequence Length = 176747 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 294 tccagagcagctctacttgca 314 ||||||||||||||||||||| Sbjct: 45378 tccagagcagctctacttgca 45398
>gb|AC154805.2| Mus musculus BAC clone RP24-511O23 from chromosome 14, complete sequence Length = 151445 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 314 agcaaagcaaagagaagagctagct 338 |||||||||||||||||| |||||| Sbjct: 151124 agcaaagcaaagagaagacctagct 151100
>gb|AC025296.10| Oryza sativa chromosome 10 BAC OSJNBa0076F20 genomic sequence, complete sequence Length = 165394 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 70 tcggaccaggcttcattcccc 90 ||||||||||||||||||||| Sbjct: 95956 tcggaccaggcttcattcccc 95976
>emb|AL138642.1|ATF21F14 Arabidopsis thaliana DNA chromosome 3, BAC clone F21F14 Length = 142001 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 70 tcggaccaggcttcattcccc 90 ||||||||||||||||||||| Sbjct: 84973 tcggaccaggcttcattcccc 84993
>emb|AJ493649.1|ATH493649 Arabidopsis thaliana microRNA MIR166g Length = 21 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 70 tcggaccaggcttcattcccc 90 ||||||||||||||||||||| Sbjct: 1 tcggaccaggcttcattcccc 21
>emb|AJ493648.1|ATH493648 Arabidopsis thaliana microRNA MIR166f Length = 21 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 70 tcggaccaggcttcattcccc 90 ||||||||||||||||||||| Sbjct: 1 tcggaccaggcttcattcccc 21
>emb|AJ493647.1|ATH493647 Arabidopsis thaliana microRNA MIR166e Length = 21 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 70 tcggaccaggcttcattcccc 90 ||||||||||||||||||||| Sbjct: 1 tcggaccaggcttcattcccc 21
>emb|AJ493646.1|ATH493646 Arabidopsis thaliana microRNA MIR166d Length = 21 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 70 tcggaccaggcttcattcccc 90 ||||||||||||||||||||| Sbjct: 1 tcggaccaggcttcattcccc 21
>emb|AJ493645.1|ATH493645 Arabidopsis thaliana microRNA MIR166c Length = 21 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 70 tcggaccaggcttcattcccc 90 ||||||||||||||||||||| Sbjct: 1 tcggaccaggcttcattcccc 21
>emb|AJ493644.1|ATH493644 Arabidopsis thaliana microRNA MIR166b Length = 21 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 70 tcggaccaggcttcattcccc 90 ||||||||||||||||||||| Sbjct: 1 tcggaccaggcttcattcccc 21
>emb|AJ493643.1|ATH493643 Arabidopsis thaliana microRNA MIR166a Length = 21 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 70 tcggaccaggcttcattcccc 90 ||||||||||||||||||||| Sbjct: 1 tcggaccaggcttcattcccc 21
>dbj|AP004678.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OJ1136_F03 Length = 110783 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 70 tcggaccaggcttcattcccc 90 ||||||||||||||||||||| Sbjct: 109351 tcggaccaggcttcattcccc 109331
>dbj|AP003614.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0481E08 Length = 171965 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 70 tcggaccaggcttcattcccc 90 ||||||||||||||||||||| Sbjct: 6734 tcggaccaggcttcattcccc 6714
>dbj|AP004868.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0048B08 Length = 146874 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 70 tcggaccaggcttcattcccc 90 ||||||||||||||||||||| Sbjct: 45469 tcggaccaggcttcattcccc 45489
>dbj|AP004839.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0519A12 Length = 156676 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 70 tcggaccaggcttcattcccc 90 ||||||||||||||||||||| Sbjct: 156088 tcggaccaggcttcattcccc 156108
>dbj|AB016875.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K9D7 Length = 60476 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 70 tcggaccaggcttcattcccc 90 ||||||||||||||||||||| Sbjct: 40286 tcggaccaggcttcattcccc 40306
>dbj|AB016871.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K16L22 Length = 79109 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 70 tcggaccaggcttcattcccc 90 ||||||||||||||||||||| Sbjct: 76886 tcggaccaggcttcattcccc 76866
>dbj|AB005234.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MBK5 Length = 89779 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 70 tcggaccaggcttcattcccc 90 ||||||||||||||||||||| Sbjct: 58009 tcggaccaggcttcattcccc 58029
>gb|AY664413.1| Zea mays cultivar B73 locus 9002, complete sequence Length = 317137 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 70 tcggaccaggcttcattcccc 90 ||||||||||||||||||||| Sbjct: 238519 tcggaccaggcttcattcccc 238499
>gb|DQ962269.1| Arabidopsis thaliana small RNA Ath_wt_11713, complete sequence Length = 20 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 71 cggaccaggcttcattcccc 90 |||||||||||||||||||| Sbjct: 1 cggaccaggcttcattcccc 20
>gb|DQ961524.1| Arabidopsis thaliana small RNA Ath_wt_10968, complete sequence Length = 21 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 71 cggaccaggcttcattcccc 90 |||||||||||||||||||| Sbjct: 1 cggaccaggcttcattcccc 20
>gb|DQ953696.1| Arabidopsis thaliana small RNA Ath_wt_03140, complete sequence Length = 20 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 70 tcggaccaggcttcattccc 89 |||||||||||||||||||| Sbjct: 1 tcggaccaggcttcattccc 20
>gb|DQ950679.1| Arabidopsis thaliana small RNA Ath_wt_00123, complete sequence Length = 21 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 70 tcggaccaggcttcattccc 89 |||||||||||||||||||| Sbjct: 2 tcggaccaggcttcattccc 21
>gb|DQ934524.1| Arabidopsis thaliana small RNA AGO4_00602, complete sequence Length = 20 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 70 tcggaccaggcttcattccc 89 |||||||||||||||||||| Sbjct: 1 tcggaccaggcttcattccc 20
>gb|DQ931359.1| Arabidopsis thaliana small RNA AGO1_4036, complete sequence Length = 21 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 70 tcggaccaggcttcattccc 89 |||||||||||||||||||| Sbjct: 2 tcggaccaggcttcattccc 21
>gb|DQ929774.1| Arabidopsis thaliana small RNA AGO1_2451, complete sequence Length = 21 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 70 tcggaccaggcttcattccc 89 |||||||||||||||||||| Sbjct: 2 tcggaccaggcttcattccc 21
>gb|DQ929130.1| Arabidopsis thaliana small RNA AGO1_1807, complete sequence Length = 20 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 71 cggaccaggcttcattcccc 90 |||||||||||||||||||| Sbjct: 1 cggaccaggcttcattcccc 20
>gb|DQ927753.1| Arabidopsis thaliana small RNA AGO1_0430, complete sequence Length = 21 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 71 cggaccaggcttcattcccc 90 |||||||||||||||||||| Sbjct: 1 cggaccaggcttcattcccc 20
>gb|DQ927629.1| Arabidopsis thaliana small RNA AGO1_0306, complete sequence Length = 20 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 70 tcggaccaggcttcattccc 89 |||||||||||||||||||| Sbjct: 1 tcggaccaggcttcattccc 20
>ref|XM_781804.2| PREDICTED: Strongylocentrotus purpuratus similar to ATP-binding cassette, sub-family C, member 9 isoform SUR2B (LOC581821), mRNA Length = 4686 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 326 agaagagctagctacagttc 345 |||||||||||||||||||| Sbjct: 4002 agaagagctagctacagttc 4021
>emb|CT025587.11| Mouse DNA sequence from clone RP23-325P15 on chromosome 9, complete sequence Length = 222656 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 289 tcaactccagagcagctcta 308 |||||||||||||||||||| Sbjct: 92216 tcaactccagagcagctcta 92197
>emb|BX957278.7| Zebrafish DNA sequence from clone DKEY-9K7 in linkage group 7, complete sequence Length = 140012 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 239 aaggatttcttcaagatgcg 258 |||||||||||||||||||| Sbjct: 111100 aaggatttcttcaagatgcg 111081
>emb|CT025545.28| Mouse DNA sequence from clone RP24-88C18 on chromosome 12, complete sequence Length = 266295 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 413 ctgcaatgtcagagcctgca 432 |||||||||||||||||||| Sbjct: 13263 ctgcaatgtcagagcctgca 13282
>gb|AC158793.4| Mus musculus chromosome 1, clone RP23-269P13, complete sequence Length = 183447 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 218 ctgatgatgattggaataga 237 |||||||||||||||||||| Sbjct: 67536 ctgatgatgattggaataga 67517
>gb|AY551231.1| Oryza sativa precursor microRNA 166i gene, complete sequence Length = 200 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 70 tcggaccaggcttcattccc 89 |||||||||||||||||||| Sbjct: 147 tcggaccaggcttcattccc 166
>gb|AC011296.3| Homo sapiens BAC clone RP11-96K1 from 7, complete sequence Length = 130513 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 384 ttttcagaatgaaagctgga 403 |||||||||||||||||||| Sbjct: 70479 ttttcagaatgaaagctgga 70460
>gb|AC119729.5| Homo sapiens 3 BAC RP11-36I16 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 125847 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 439 gaatgtcagatctaggtgcaaaca 462 |||||| ||||||||||||||||| Sbjct: 59266 gaatgtaagatctaggtgcaaaca 59289
>emb|CR848674.8| Zebrafish DNA sequence from clone DKEY-73G17 in linkage group 16, complete sequence Length = 149652 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 428 ctgcatgctgtgaatgtcag 447 |||||||||||||||||||| Sbjct: 82816 ctgcatgctgtgaatgtcag 82797
>emb|AJ872261.1| Festuca glaucescens x Lolium multiflorum microsatellite DNA, clone B4-D9 Length = 676 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 67 gtttcggaccaggcttcattcccc 90 ||||||||||||||||||| |||| Sbjct: 85 gtttcggaccaggcttcatccccc 62
>emb|CR524827.16| Zebrafish DNA sequence from clone CH211-167H17 in linkage group 16, complete sequence Length = 153848 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 428 ctgcatgctgtgaatgtcag 447 |||||||||||||||||||| Sbjct: 8738 ctgcatgctgtgaatgtcag 8719
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8 Length = 28434780 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 70 tcggaccaggcttcattccc 89 |||||||||||||||||||| Sbjct: 23038261 tcggaccaggcttcattccc 23038280
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7 Length = 29644043 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 396 aagctggattctgcatgctg 415 |||||||||||||||||||| Sbjct: 5997397 aagctggattctgcatgctg 5997416
>ref|NM_001006538.1| Gallus gallus DPH2 homolog (S. cerevisiae) (DPH2), mRNA emb|AJ720102.1| Gallus gallus mRNA for hypothetical protein, clone 10j16 Length = 1858 Score = 40.1 bits (20), Expect = 8.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 424 gagcctgcatgctgtgaatgtcagatct 451 ||||||||||||||| ||||||||||| Sbjct: 1509 gagcctgcatgctgtttatgtcagatct 1536
>dbj|AP005098.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0008C11 Length = 157205 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 396 aagctggattctgcatgctg 415 |||||||||||||||||||| Sbjct: 52567 aagctggattctgcatgctg 52586
>dbj|AP004585.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0470B03 Length = 163371 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 70 tcggaccaggcttcattccc 89 |||||||||||||||||||| Sbjct: 97989 tcggaccaggcttcattccc 98008
>gb|AC016791.23| Mus musculus chromosome 19, clone RP23-187B17, complete sequence Length = 172942 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 316 caaagcaaagagaagagcta 335 |||||||||||||||||||| Sbjct: 21392 caaagcaaagagaagagcta 21411
>gb|AE017321.1| Wolbachia endosymbiont strain TRS of Brugia malayi, complete genome Length = 1080084 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 267 atgacagatgggtcgacata 286 |||||||||||||||||||| Sbjct: 353105 atgacagatgggtcgacata 353124
>gb|AC102249.16| Mus musculus chromosome 19, clone RP24-160D21, complete sequence Length = 212190 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 316 caaagcaaagagaagagcta 335 |||||||||||||||||||| Sbjct: 201983 caaagcaaagagaagagcta 202002
>gb|AC160111.2| Mus musculus BAC clone RP24-144L16 from chromosome 9, complete sequence Length = 134313 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 289 tcaactccagagcagctcta 308 |||||||||||||||||||| Sbjct: 69678 tcaactccagagcagctcta 69697 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 102,175,119 Number of extensions: 5568095 Number of successful extensions: 106380 Number of sequences better than 10.0: 93 Number of HSP's gapped: 106380 Number of HSP's successfully gapped: 98 Length of query: 566 Length of database: 18,610,659,111 Length adjustment: 22 Effective length of query: 544 Effective length of database: 18,508,616,841 Effective search space: 10068687561504 Effective search space used: 10068687561504 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)