| Clone Name | FLbaf145h06 |
|---|---|
| Clone Library Name | barley_pub |
>emb|CT830571.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCPI008B17, full insert sequence Length = 618 Score = 218 bits (110), Expect = 4e-53 Identities = 182/206 (88%) Strand = Plus / Plus Query: 875 caggatggcaatgaggttttcttccgcatcaagagatccacacagctcaagaagctgatg 934 |||||||| || ||||| |||||||||||||||||||| || ||||| |||||||||||| Sbjct: 173 caggatgggaacgaggtattcttccgcatcaagagatctacgcagctgaagaagctgatg 232 Query: 935 aatgcctactgtgaccgccagtctgtggatctcaattccattgcgttcctttttgatggt 994 || ||||| |||||||| |||||||||||| | ||| | ||||| ||||| ||||||||| Sbjct: 233 aacgcctattgtgaccgtcagtctgtggatatgaatgctattgcattcctatttgatggt 292 Query: 995 cgtaggctccgtggtgagcagacccccgacgagcttgagatggaagaaggcgatgagatt 1054 |||||||||||||| ||||||||||| |||||||| ||||||||||| || || ||||| Sbjct: 293 cgtaggctccgtggcgagcagacccctgacgagctcgagatggaagacggggacgagatc 352 Query: 1055 gatgccatgctgcaccagactggagg 1080 || |||||||| |||||||||||||| Sbjct: 353 gacgccatgctccaccagactggagg 378 Score = 65.9 bits (33), Expect = 3e-07 Identities = 59/67 (88%), Gaps = 3/67 (4%) Strand = Plus / Plus Query: 132 gaggacaagaagcccgcgggcg---acggcggaggcgcccacatcaacctcaaggtcaag 188 |||||||||||||| ||||| | | ||||| ||||||||||||||||||||||||||| Sbjct: 110 gaggacaagaagccggcggggggagagggcggcggcgcccacatcaacctcaaggtcaag 169 Query: 189 gggcagg 195 || |||| Sbjct: 170 ggacagg 176
>ref|NM_001051742.1| Oryza sativa (japonica cultivar-group) Os01g0918300 (Os01g0918300) mRNA, complete cds Length = 642 Score = 218 bits (110), Expect = 4e-53 Identities = 182/206 (88%) Strand = Plus / Plus Query: 875 caggatggcaatgaggttttcttccgcatcaagagatccacacagctcaagaagctgatg 934 |||||||| || ||||| |||||||||||||||||||| || ||||| |||||||||||| Sbjct: 184 caggatgggaacgaggtattcttccgcatcaagagatctacgcagctgaagaagctgatg 243 Query: 935 aatgcctactgtgaccgccagtctgtggatctcaattccattgcgttcctttttgatggt 994 || ||||| |||||||| |||||||||||| | ||| | ||||| ||||| ||||||||| Sbjct: 244 aacgcctattgtgaccgtcagtctgtggatatgaatgctattgcattcctatttgatggt 303 Query: 995 cgtaggctccgtggtgagcagacccccgacgagcttgagatggaagaaggcgatgagatt 1054 |||||||||||||| ||||||||||| |||||||| ||||||||||| || || ||||| Sbjct: 304 cgtaggctccgtggcgagcagacccctgacgagctcgagatggaagacggggacgagatc 363 Query: 1055 gatgccatgctgcaccagactggagg 1080 || |||||||| |||||||||||||| Sbjct: 364 gacgccatgctccaccagactggagg 389 Score = 65.9 bits (33), Expect = 3e-07 Identities = 59/67 (88%), Gaps = 3/67 (4%) Strand = Plus / Plus Query: 132 gaggacaagaagcccgcgggcg---acggcggaggcgcccacatcaacctcaaggtcaag 188 |||||||||||||| ||||| | | ||||| ||||||||||||||||||||||||||| Sbjct: 121 gaggacaagaagccggcggggggagagggcggcggcgcccacatcaacctcaaggtcaag 180 Query: 189 gggcagg 195 || |||| Sbjct: 181 ggacagg 187
>emb|X99608.1|OSSMT3 O.sativa mRNA for SMT3 protein Length = 303 Score = 218 bits (110), Expect = 4e-53 Identities = 182/206 (88%) Strand = Plus / Plus Query: 875 caggatggcaatgaggttttcttccgcatcaagagatccacacagctcaagaagctgatg 934 |||||||| || ||||| |||||||||||||||||||| || ||||| |||||||||||| Sbjct: 82 caggatgggaacgaggtattcttccgcatcaagagatctacgcagctgaagaagctgatg 141 Query: 935 aatgcctactgtgaccgccagtctgtggatctcaattccattgcgttcctttttgatggt 994 || ||||| |||||||| |||||||||||| | ||| | ||||| ||||| ||||||||| Sbjct: 142 aacgcctattgtgaccgtcagtctgtggatatgaatgctattgcattcctatttgatggt 201 Query: 995 cgtaggctccgtggtgagcagacccccgacgagcttgagatggaagaaggcgatgagatt 1054 |||||||||||||| ||||||||||| |||||||| ||||||||||| || || ||||| Sbjct: 202 cgtaggctccgtggcgagcagacccctgacgagctcgagatggaagacggggacgagatc 261 Query: 1055 gatgccatgctgcaccagactggagg 1080 || |||||||| |||||||||||||| Sbjct: 262 gacgccatgctccaccagactggagg 287 Score = 65.9 bits (33), Expect = 3e-07 Identities = 59/67 (88%), Gaps = 3/67 (4%) Strand = Plus / Plus Query: 132 gaggacaagaagcccgcgggcg---acggcggaggcgcccacatcaacctcaaggtcaag 188 |||||||||||||| ||||| | | ||||| ||||||||||||||||||||||||||| Sbjct: 19 gaggacaagaagccggcggggggagagggcggcggcgcccacatcaacctcaaggtcaag 78 Query: 189 gggcagg 195 || |||| Sbjct: 79 ggacagg 85
>dbj|AK058869.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-006-C03, full insert sequence Length = 642 Score = 218 bits (110), Expect = 4e-53 Identities = 182/206 (88%) Strand = Plus / Plus Query: 875 caggatggcaatgaggttttcttccgcatcaagagatccacacagctcaagaagctgatg 934 |||||||| || ||||| |||||||||||||||||||| || ||||| |||||||||||| Sbjct: 184 caggatgggaacgaggtattcttccgcatcaagagatctacgcagctgaagaagctgatg 243 Query: 935 aatgcctactgtgaccgccagtctgtggatctcaattccattgcgttcctttttgatggt 994 || ||||| |||||||| |||||||||||| | ||| | ||||| ||||| ||||||||| Sbjct: 244 aacgcctattgtgaccgtcagtctgtggatatgaatgctattgcattcctatttgatggt 303 Query: 995 cgtaggctccgtggtgagcagacccccgacgagcttgagatggaagaaggcgatgagatt 1054 |||||||||||||| ||||||||||| |||||||| ||||||||||| || || ||||| Sbjct: 304 cgtaggctccgtggcgagcagacccctgacgagctcgagatggaagacggggacgagatc 363 Query: 1055 gatgccatgctgcaccagactggagg 1080 || |||||||| |||||||||||||| Sbjct: 364 gacgccatgctccaccagactggagg 389 Score = 65.9 bits (33), Expect = 3e-07 Identities = 59/67 (88%), Gaps = 3/67 (4%) Strand = Plus / Plus Query: 132 gaggacaagaagcccgcgggcg---acggcggaggcgcccacatcaacctcaaggtcaag 188 |||||||||||||| ||||| | | ||||| ||||||||||||||||||||||||||| Sbjct: 121 gaggacaagaagccggcggggggagagggcggcggcgcccacatcaacctcaaggtcaag 180 Query: 189 gggcagg 195 || |||| Sbjct: 181 ggacagg 187
>dbj|AB016030.1| Oryza sativa (japonica cultivar-group) SUMO-1 mRNA for ubiquitin-related protein, complete cds Length = 569 Score = 218 bits (110), Expect = 4e-53 Identities = 182/206 (88%) Strand = Plus / Plus Query: 875 caggatggcaatgaggttttcttccgcatcaagagatccacacagctcaagaagctgatg 934 |||||||| || ||||| |||||||||||||||||||| || ||||| |||||||||||| Sbjct: 161 caggatgggaacgaggtattcttccgcatcaagagatctacgcagctgaagaagctgatg 220 Query: 935 aatgcctactgtgaccgccagtctgtggatctcaattccattgcgttcctttttgatggt 994 || ||||| |||||||| |||||||||||| | ||| | ||||| ||||| ||||||||| Sbjct: 221 aacgcctattgtgaccgtcagtctgtggatatgaatgctattgcattcctatttgatggt 280 Query: 995 cgtaggctccgtggtgagcagacccccgacgagcttgagatggaagaaggcgatgagatt 1054 |||||||||||||| ||||||||||| |||||||| ||||||||||| || || ||||| Sbjct: 281 cgtaggctccgtggcgagcagacccctgacgagctcgagatggaagacggggacgagatc 340 Query: 1055 gatgccatgctgcaccagactggagg 1080 || |||||||| |||||||||||||| Sbjct: 341 gacgccatgctccaccagactggagg 366 Score = 65.9 bits (33), Expect = 3e-07 Identities = 59/67 (88%), Gaps = 3/67 (4%) Strand = Plus / Plus Query: 132 gaggacaagaagcccgcgggcg---acggcggaggcgcccacatcaacctcaaggtcaag 188 |||||||||||||| ||||| | | ||||| ||||||||||||||||||||||||||| Sbjct: 98 gaggacaagaagccggcggggggagagggcggcggcgcccacatcaacctcaaggtcaag 157 Query: 189 gggcagg 195 || |||| Sbjct: 158 ggacagg 164
>ref|NM_001051741.1| Oryza sativa (japonica cultivar-group) Os01g0918200 (Os01g0918200) mRNA, complete cds Length = 627 Score = 196 bits (99), Expect = 1e-46 Identities = 177/203 (87%) Strand = Plus / Plus Query: 875 caggatggcaatgaggttttcttccgcatcaagagatccacacagctcaagaagctgatg 934 ||||||||||| ||||| ||||| || ||||||||||| || || || |||||||||||| Sbjct: 182 caggatggcaacgaggtgttctttcgtatcaagagatcaacccaactgaagaagctgatg 241 Query: 935 aatgcctactgtgaccgccagtctgtggatctcaattccattgcgttcctttttgatggt 994 || ||||||||||| |||||||| |||||| |||| || ||||| ||||| ||||||||| Sbjct: 242 aacgcctactgtgatcgccagtccgtggatatcaaatctattgccttcctgtttgatggt 301 Query: 995 cgtaggctccgtggtgagcagacccccgacgagcttgagatggaagaaggcgatgagatt 1054 ||||||||| || |||||||||||| ||| |||| ||||||||||| ||||| |||||| Sbjct: 302 cgtaggctcaatgctgagcagacccctgaccagctcgagatggaagacggcgacgagatt 361 Query: 1055 gatgccatgctgcaccagactgg 1077 || |||||||| ||||||||||| Sbjct: 362 gacgccatgcttcaccagactgg 384 Score = 63.9 bits (32), Expect = 1e-06 Identities = 38/40 (95%) Strand = Plus / Plus Query: 156 ggcggaggcgcccacatcaacctcaaggtcaaggggcagg 195 ||||| ||||||||||||||||||||||||||||| |||| Sbjct: 146 ggcggcggcgcccacatcaacctcaaggtcaagggacagg 185
>dbj|AK103092.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033118J24, full insert sequence Length = 626 Score = 196 bits (99), Expect = 1e-46 Identities = 177/203 (87%) Strand = Plus / Plus Query: 875 caggatggcaatgaggttttcttccgcatcaagagatccacacagctcaagaagctgatg 934 ||||||||||| ||||| ||||| || ||||||||||| || || || |||||||||||| Sbjct: 205 caggatggcaacgaggtgttctttcgtatcaagagatcaacccaactgaagaagctgatg 264 Query: 935 aatgcctactgtgaccgccagtctgtggatctcaattccattgcgttcctttttgatggt 994 || ||||||||||| |||||||| |||||| |||| || ||||| ||||| ||||||||| Sbjct: 265 aacgcctactgtgatcgccagtccgtggatatcaaatctattgccttcctgtttgatggt 324 Query: 995 cgtaggctccgtggtgagcagacccccgacgagcttgagatggaagaaggcgatgagatt 1054 ||||||||| || |||||||||||| ||| |||| ||||||||||| ||||| |||||| Sbjct: 325 cgtaggctcaatgctgagcagacccctgaccagctcgagatggaagacggcgacgagatt 384 Query: 1055 gatgccatgctgcaccagactgg 1077 || |||||||| ||||||||||| Sbjct: 385 gacgccatgcttcaccagactgg 407 Score = 63.9 bits (32), Expect = 1e-06 Identities = 38/40 (95%) Strand = Plus / Plus Query: 156 ggcggaggcgcccacatcaacctcaaggtcaaggggcagg 195 ||||| ||||||||||||||||||||||||||||| |||| Sbjct: 169 ggcggcggcgcccacatcaacctcaaggtcaagggacagg 208
>dbj|AK062434.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-103-A02, full insert sequence Length = 627 Score = 196 bits (99), Expect = 1e-46 Identities = 177/203 (87%) Strand = Plus / Plus Query: 875 caggatggcaatgaggttttcttccgcatcaagagatccacacagctcaagaagctgatg 934 ||||||||||| ||||| ||||| || ||||||||||| || || || |||||||||||| Sbjct: 182 caggatggcaacgaggtgttctttcgtatcaagagatcaacccaactgaagaagctgatg 241 Query: 935 aatgcctactgtgaccgccagtctgtggatctcaattccattgcgttcctttttgatggt 994 || ||||||||||| |||||||| |||||| |||| || ||||| ||||| ||||||||| Sbjct: 242 aacgcctactgtgatcgccagtccgtggatatcaaatctattgccttcctgtttgatggt 301 Query: 995 cgtaggctccgtggtgagcagacccccgacgagcttgagatggaagaaggcgatgagatt 1054 ||||||||| || |||||||||||| ||| |||| ||||||||||| ||||| |||||| Sbjct: 302 cgtaggctcaatgctgagcagacccctgaccagctcgagatggaagacggcgacgagatt 361 Query: 1055 gatgccatgctgcaccagactgg 1077 || |||||||| ||||||||||| Sbjct: 362 gacgccatgcttcaccagactgg 384 Score = 63.9 bits (32), Expect = 1e-06 Identities = 38/40 (95%) Strand = Plus / Plus Query: 156 ggcggaggcgcccacatcaacctcaaggtcaaggggcagg 195 ||||| ||||||||||||||||||||||||||||| |||| Sbjct: 146 ggcggcggcgcccacatcaacctcaaggtcaagggacagg 185
>gb|DQ244252.1| Zea mays clone 3895 mRNA sequence Length = 726 Score = 178 bits (90), Expect = 3e-41 Identities = 177/206 (85%) Strand = Plus / Plus Query: 875 caggatggcaatgaggttttcttccgcatcaagagatccacacagctcaagaagctgatg 934 ||||||||||||||||| ||||| ||||| ||||| ||||| ||||| |||||||||||| Sbjct: 92 caggatggcaatgaggtgttctttcgcataaagaggtccacccagctgaagaagctgatg 151 Query: 935 aatgcctactgtgaccgccagtctgtggatctcaattccattgcgttcctttttgatggt 994 || || || |||||||||||||||||||| | ||| ||||||||||||| |||||||| Sbjct: 152 aacgcttattgtgaccgccagtctgtggacatgaatgccattgcgttcctgtttgatggc 211 Query: 995 cgtaggctccgtggtgagcagacccccgacgagcttgagatggaagaaggcgatgagatt 1054 || ||||| || || ||||||||||| || ||||| |||||||| || ||||| ||||| Sbjct: 212 cgcaggcttcgcggcgagcagacccctgatgagctggagatggaggacggcgacgagatc 271 Query: 1055 gatgccatgctgcaccagactggagg 1080 || |||||||| |||||||| ||||| Sbjct: 272 gacgccatgcttcaccagaccggagg 297 Score = 52.0 bits (26), Expect = 0.005 Identities = 32/34 (94%) Strand = Plus / Plus Query: 162 ggcgcccacatcaacctcaaggtcaaggggcagg 195 ||||||||||||||||| ||||||||||| |||| Sbjct: 62 ggcgcccacatcaaccttaaggtcaagggacagg 95
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 172 bits (87), Expect = 2e-39 Identities = 141/159 (88%) Strand = Plus / Minus Query: 869 gttctgcaggatggcaatgaggttttcttccgcatcaagagatccacacagctcaagaag 928 |||||| ||||||| || ||||| |||||||||||||||||||| || ||||| |||||| Sbjct: 40058229 gttctgtaggatgggaacgaggtattcttccgcatcaagagatctacgcagctgaagaag 40058170 Query: 929 ctgatgaatgcctactgtgaccgccagtctgtggatctcaattccattgcgttccttttt 988 |||||||| ||||| |||||||| |||||||||||| | ||| | ||||| ||||| ||| Sbjct: 40058169 ctgatgaacgcctattgtgaccgtcagtctgtggatatgaatgctattgcattcctattt 40058110 Query: 989 gatggtcgtaggctccgtggtgagcagacccccgacgag 1027 |||||||||||||||||||| ||||||||||| |||||| Sbjct: 40058109 gatggtcgtaggctccgtggcgagcagacccctgacgag 40058071 Score = 137 bits (69), Expect = 1e-28 Identities = 126/145 (86%) Strand = Plus / Minus Query: 876 aggatggcaatgaggttttcttccgcatcaagagatccacacagctcaagaagctgatga 935 |||||||||| ||||| ||||| || ||||||||||| || || || ||||||||||||| Sbjct: 40055442 aggatggcaacgaggtgttctttcgtatcaagagatcaacccaactgaagaagctgatga 40055383 Query: 936 atgcctactgtgaccgccagtctgtggatctcaattccattgcgttcctttttgatggtc 995 | ||||||||||| |||||||| |||||| |||| || ||||| ||||| |||||||||| Sbjct: 40055382 acgcctactgtgatcgccagtccgtggatatcaaatctattgccttcctgtttgatggtc 40055323 Query: 996 gtaggctccgtggtgagcagacccc 1020 |||||||| || |||||||||||| Sbjct: 40055322 gtaggctcaatgctgagcagacccc 40055298 Score = 73.8 bits (37), Expect = 1e-09 Identities = 63/71 (88%), Gaps = 3/71 (4%) Strand = Plus / Minus Query: 132 gaggacaagaagcccgcgggcg---acggcggaggcgcccacatcaacctcaaggtcaag 188 |||||||||||||| ||||| | | ||||| ||||||||||||||||||||||||||| Sbjct: 40059514 gaggacaagaagccggcggggggagagggcggcggcgcccacatcaacctcaaggtcaag 40059455 Query: 189 gggcaggtctg 199 || |||||||| Sbjct: 40059454 ggacaggtctg 40059444 Score = 65.9 bits (33), Expect = 3e-07 Identities = 39/41 (95%) Strand = Plus / Minus Query: 156 ggcggaggcgcccacatcaacctcaaggtcaaggggcaggt 196 ||||| ||||||||||||||||||||||||||||| ||||| Sbjct: 40056734 ggcggcggcgcccacatcaacctcaaggtcaagggacaggt 40056694 Score = 63.9 bits (32), Expect = 1e-06 Identities = 47/52 (90%) Strand = Plus / Minus Query: 1026 agcttgagatggaagaaggcgatgagattgatgccatgctgcaccagactgg 1077 |||| ||||||||||| ||||| |||||||| |||||||| ||||||||||| Sbjct: 40055176 agctcgagatggaagacggcgacgagattgacgccatgcttcaccagactgg 40055125 Score = 54.0 bits (27), Expect = 0.001 Identities = 48/55 (87%) Strand = Plus / Minus Query: 1026 agcttgagatggaagaaggcgatgagattgatgccatgctgcaccagactggagg 1080 |||| ||||||||||| || || ||||| || |||||||| |||||||||||||| Sbjct: 40057974 agctcgagatggaagacggggacgagatcgacgccatgctccaccagactggagg 40057920
>dbj|AP003451.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0413C03 Length = 162161 Score = 172 bits (87), Expect = 2e-39 Identities = 141/159 (88%) Strand = Plus / Minus Query: 869 gttctgcaggatggcaatgaggttttcttccgcatcaagagatccacacagctcaagaag 928 |||||| ||||||| || ||||| |||||||||||||||||||| || ||||| |||||| Sbjct: 149680 gttctgtaggatgggaacgaggtattcttccgcatcaagagatctacgcagctgaagaag 149621 Query: 929 ctgatgaatgcctactgtgaccgccagtctgtggatctcaattccattgcgttccttttt 988 |||||||| ||||| |||||||| |||||||||||| | ||| | ||||| ||||| ||| Sbjct: 149620 ctgatgaacgcctattgtgaccgtcagtctgtggatatgaatgctattgcattcctattt 149561 Query: 989 gatggtcgtaggctccgtggtgagcagacccccgacgag 1027 |||||||||||||||||||| ||||||||||| |||||| Sbjct: 149560 gatggtcgtaggctccgtggcgagcagacccctgacgag 149522 Score = 137 bits (69), Expect = 1e-28 Identities = 126/145 (86%) Strand = Plus / Minus Query: 876 aggatggcaatgaggttttcttccgcatcaagagatccacacagctcaagaagctgatga 935 |||||||||| ||||| ||||| || ||||||||||| || || || ||||||||||||| Sbjct: 146893 aggatggcaacgaggtgttctttcgtatcaagagatcaacccaactgaagaagctgatga 146834 Query: 936 atgcctactgtgaccgccagtctgtggatctcaattccattgcgttcctttttgatggtc 995 | ||||||||||| |||||||| |||||| |||| || ||||| ||||| |||||||||| Sbjct: 146833 acgcctactgtgatcgccagtccgtggatatcaaatctattgccttcctgtttgatggtc 146774 Query: 996 gtaggctccgtggtgagcagacccc 1020 |||||||| || |||||||||||| Sbjct: 146773 gtaggctcaatgctgagcagacccc 146749 Score = 73.8 bits (37), Expect = 1e-09 Identities = 63/71 (88%), Gaps = 3/71 (4%) Strand = Plus / Minus Query: 132 gaggacaagaagcccgcgggcg---acggcggaggcgcccacatcaacctcaaggtcaag 188 |||||||||||||| ||||| | | ||||| ||||||||||||||||||||||||||| Sbjct: 150965 gaggacaagaagccggcggggggagagggcggcggcgcccacatcaacctcaaggtcaag 150906 Query: 189 gggcaggtctg 199 || |||||||| Sbjct: 150905 ggacaggtctg 150895 Score = 65.9 bits (33), Expect = 3e-07 Identities = 39/41 (95%) Strand = Plus / Minus Query: 156 ggcggaggcgcccacatcaacctcaaggtcaaggggcaggt 196 ||||| ||||||||||||||||||||||||||||| ||||| Sbjct: 148185 ggcggcggcgcccacatcaacctcaaggtcaagggacaggt 148145 Score = 63.9 bits (32), Expect = 1e-06 Identities = 47/52 (90%) Strand = Plus / Minus Query: 1026 agcttgagatggaagaaggcgatgagattgatgccatgctgcaccagactgg 1077 |||| ||||||||||| ||||| |||||||| |||||||| ||||||||||| Sbjct: 146627 agctcgagatggaagacggcgacgagattgacgccatgcttcaccagactgg 146576 Score = 54.0 bits (27), Expect = 0.001 Identities = 48/55 (87%) Strand = Plus / Minus Query: 1026 agcttgagatggaagaaggcgatgagattgatgccatgctgcaccagactggagg 1080 |||| ||||||||||| || || ||||| || |||||||| |||||||||||||| Sbjct: 149425 agctcgagatggaagacggggacgagatcgacgccatgctccaccagactggagg 149371
>dbj|AP003437.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0678F11 Length = 154292 Score = 172 bits (87), Expect = 2e-39 Identities = 141/159 (88%) Strand = Plus / Minus Query: 869 gttctgcaggatggcaatgaggttttcttccgcatcaagagatccacacagctcaagaag 928 |||||| ||||||| || ||||| |||||||||||||||||||| || ||||| |||||| Sbjct: 1313 gttctgtaggatgggaacgaggtattcttccgcatcaagagatctacgcagctgaagaag 1254 Query: 929 ctgatgaatgcctactgtgaccgccagtctgtggatctcaattccattgcgttccttttt 988 |||||||| ||||| |||||||| |||||||||||| | ||| | ||||| ||||| ||| Sbjct: 1253 ctgatgaacgcctattgtgaccgtcagtctgtggatatgaatgctattgcattcctattt 1194 Query: 989 gatggtcgtaggctccgtggtgagcagacccccgacgag 1027 |||||||||||||||||||| ||||||||||| |||||| Sbjct: 1193 gatggtcgtaggctccgtggcgagcagacccctgacgag 1155 Score = 73.8 bits (37), Expect = 1e-09 Identities = 63/71 (88%), Gaps = 3/71 (4%) Strand = Plus / Minus Query: 132 gaggacaagaagcccgcgggcg---acggcggaggcgcccacatcaacctcaaggtcaag 188 |||||||||||||| ||||| | | ||||| ||||||||||||||||||||||||||| Sbjct: 2598 gaggacaagaagccggcggggggagagggcggcggcgcccacatcaacctcaaggtcaag 2539 Query: 189 gggcaggtctg 199 || |||||||| Sbjct: 2538 ggacaggtctg 2528 Score = 54.0 bits (27), Expect = 0.001 Identities = 48/55 (87%) Strand = Plus / Minus Query: 1026 agcttgagatggaagaaggcgatgagattgatgccatgctgcaccagactggagg 1080 |||| ||||||||||| || || ||||| || |||||||| |||||||||||||| Sbjct: 1058 agctcgagatggaagacggggacgagatcgacgccatgctccaccagactggagg 1004
>dbj|AK069668.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023026B05, full insert sequence Length = 1969 Score = 172 bits (87), Expect = 2e-39 Identities = 141/159 (88%) Strand = Plus / Plus Query: 869 gttctgcaggatggcaatgaggttttcttccgcatcaagagatccacacagctcaagaag 928 |||||| ||||||| || ||||| |||||||||||||||||||| || ||||| |||||| Sbjct: 1407 gttctgtaggatgggaacgaggtattcttccgcatcaagagatctacgcagctgaagaag 1466 Query: 929 ctgatgaatgcctactgtgaccgccagtctgtggatctcaattccattgcgttccttttt 988 |||||||| ||||| |||||||| |||||||||||| | ||| | ||||| ||||| ||| Sbjct: 1467 ctgatgaacgcctattgtgaccgtcagtctgtggatatgaatgctattgcattcctattt 1526 Query: 989 gatggtcgtaggctccgtggtgagcagacccccgacgag 1027 |||||||||||||||||||| ||||||||||| |||||| Sbjct: 1527 gatggtcgtaggctccgtggcgagcagacccctgacgag 1565 Score = 73.8 bits (37), Expect = 1e-09 Identities = 63/71 (88%), Gaps = 3/71 (4%) Strand = Plus / Plus Query: 132 gaggacaagaagcccgcgggcg---acggcggaggcgcccacatcaacctcaaggtcaag 188 |||||||||||||| ||||| | | ||||| ||||||||||||||||||||||||||| Sbjct: 122 gaggacaagaagccggcggggggagagggcggcggcgcccacatcaacctcaaggtcaag 181 Query: 189 gggcaggtctg 199 || |||||||| Sbjct: 182 ggacaggtctg 192 Score = 54.0 bits (27), Expect = 0.001 Identities = 48/55 (87%) Strand = Plus / Plus Query: 1026 agcttgagatggaagaaggcgatgagattgatgccatgctgcaccagactggagg 1080 |||| ||||||||||| || || ||||| || |||||||| |||||||||||||| Sbjct: 1662 agctcgagatggaagacggggacgagatcgacgccatgctccaccagactggagg 1716
>gb|AY103962.1| Zea mays PCO135487 mRNA sequence Length = 781 Score = 170 bits (86), Expect = 7e-39 Identities = 176/206 (85%) Strand = Plus / Plus Query: 875 caggatggcaatgaggttttcttccgcatcaagagatccacacagctcaagaagctgatg 934 ||||||||||||||||| ||||| ||||| ||||| ||||| ||||| |||||||||||| Sbjct: 139 caggatggcaatgaggtgttctttcgcataaagaggtccacccagctgaagaagctgatg 198 Query: 935 aatgcctactgtgaccgccagtctgtggatctcaattccattgcgttcctttttgatggt 994 || ||||| || ||||||||||||||||| | ||| ||||||| ||||| |||||||| Sbjct: 199 aacgcctattgcgaccgccagtctgtggacatgaatgccattgcattcctgtttgatggc 258 Query: 995 cgtaggctccgtggtgagcagacccccgacgagcttgagatggaagaaggcgatgagatt 1054 || ||||| || || ||||||||||| || ||||| |||||||| || ||||| ||||| Sbjct: 259 cgcaggcttcgcggcgagcagacccctgatgagctggagatggaggacggcgacgagatc 318 Query: 1055 gatgccatgctgcaccagactggagg 1080 || |||||||| |||||||| ||||| Sbjct: 319 gacgccatgcttcaccagaccggagg 344 Score = 52.0 bits (26), Expect = 0.005 Identities = 32/34 (94%) Strand = Plus / Plus Query: 162 ggcgcccacatcaacctcaaggtcaaggggcagg 195 ||||||||||||||||| ||||||||||| |||| Sbjct: 109 ggcgcccacatcaaccttaaggtcaagggacagg 142
>emb|X99609.1|ATSMT3 A.thaliana mRNA for SMT3 protein Length = 315 Score = 141 bits (71), Expect = 7e-30 Identities = 170/203 (83%) Strand = Plus / Plus Query: 875 caggatggcaatgaggttttcttccgcatcaagagatccacacagctcaagaagctgatg 934 |||||||| || ||||||||||| | ||||||||| ||| |||||||||||||||||| Sbjct: 73 caggatggaaacgaggttttctttaggatcaagagaagcactcagctcaagaagctgatg 132 Query: 935 aatgcctactgtgaccgccagtctgtggatctcaattccattgcgttcctttttgatggt 994 ||||| ||||||||||| || |||||||| | || |||||||| ||| | |||||||| Sbjct: 133 aatgcttactgtgaccggcaatctgtggacatgaactccattgctttcttgtttgatggg 192 Query: 995 cgtaggctccgtggtgagcagacccccgacgagcttgagatggaagaaggcgatgagatt 1054 ||| | || |||| |||||| || ||||| |||||||| |||||||| || |||||||| Sbjct: 193 cgtcgtcttcgtgctgagcaaactcccgatgagcttgacatggaagatggagatgagatc 252 Query: 1055 gatgccatgctgcaccagactgg 1077 ||||| ||||| || |||||||| Sbjct: 253 gatgcaatgcttcatcagactgg 275
>ref|NM_124898.2| Arabidopsis thaliana SUM2 (SMALL UBIQUITIN-LIKE MODIFIER 2) (SUM2) mRNA, complete cds Length = 643 Score = 133 bits (67), Expect = 2e-27 Identities = 169/203 (83%) Strand = Plus / Plus Query: 875 caggatggcaatgaggttttcttccgcatcaagagatccacacagctcaagaagctgatg 934 |||||||| ||||| || ||||| | ||||||||| ||| |||||||| || |||||| Sbjct: 223 caggatggtaatgaagtcttctttaggatcaagagaagcactcagctcaaaaaactgatg 282 Query: 935 aatgcctactgtgaccgccagtctgtggatctcaattccattgcgttcctttttgatggt 994 ||||| ||||||||||| |||||||||||| |||| || ||||| ||| | ||||||||| Sbjct: 283 aatgcttactgtgaccgtcagtctgtggatttcaactcaattgctttcttgtttgatggt 342 Query: 995 cgtaggctccgtggtgagcagacccccgacgagcttgagatggaagaaggcgatgagatt 1054 ||| | || |||| |||||||| || || |||||||| |||||||| || |||||||| Sbjct: 343 cgtcgtcttcgtgccgagcagactccagatgagcttgaaatggaagatggagatgagatc 402 Query: 1055 gatgccatgctgcaccagactgg 1077 ||||| ||||| || |||||||| Sbjct: 403 gatgcaatgcttcatcagactgg 425
>ref|NM_118818.2| Arabidopsis thaliana SUM1 (SMALL UBIQUITIN-LIKE MODIFIER 1) (SUM1) mRNA, complete cds Length = 710 Score = 133 bits (67), Expect = 2e-27 Identities = 169/203 (83%) Strand = Plus / Plus Query: 875 caggatggcaatgaggttttcttccgcatcaagagatccacacagctcaagaagctgatg 934 |||||||| || ||||||||||| | ||||||||| ||| |||||||||||||||||| Sbjct: 211 caggatggaaacgaggttttctttaggatcaagagaagcactcagctcaagaagctgatg 270 Query: 935 aatgcctactgtgaccgccagtctgtggatctcaattccattgcgttcctttttgatggt 994 ||||| ||||||||||| || |||||||| | || |||||||| ||| | |||||||| Sbjct: 271 aatgcttactgtgaccggcaatctgtggacatgaactccattgctttcttgtttgatggg 330 Query: 995 cgtaggctccgtggtgagcagacccccgacgagcttgagatggaagaaggcgatgagatt 1054 ||| | || |||| |||||| || ||||| |||||||| ||||| || || |||||||| Sbjct: 331 cgtcgtcttcgtgctgagcaaactcccgatgagcttgacatggaggatggtgatgagatc 390 Query: 1055 gatgccatgctgcaccagactgg 1077 ||||| ||||| || |||||||| Sbjct: 391 gatgcgatgctccatcagactgg 413
>gb|BT008437.1| Arabidopsis thaliana At4g26840 gene, complete cds Length = 303 Score = 133 bits (67), Expect = 2e-27 Identities = 169/203 (83%) Strand = Plus / Plus Query: 875 caggatggcaatgaggttttcttccgcatcaagagatccacacagctcaagaagctgatg 934 |||||||| || ||||||||||| | ||||||||| ||| |||||||||||||||||| Sbjct: 73 caggatggaaacgaggttttctttaggatcaagagaagcactcagctcaagaagctgatg 132 Query: 935 aatgcctactgtgaccgccagtctgtggatctcaattccattgcgttcctttttgatggt 994 ||||| ||||||||||| || |||||||| | || |||||||| ||| | |||||||| Sbjct: 133 aatgcttactgtgaccggcaatctgtggacatgaactccattgctttcttgtttgatggg 192 Query: 995 cgtaggctccgtggtgagcagacccccgacgagcttgagatggaagaaggcgatgagatt 1054 ||| | || |||| |||||| || ||||| |||||||| ||||| || || |||||||| Sbjct: 193 cgtcgtcttcgtgctgagcaaactcccgatgagcttgacatggaggatggtgatgagatc 252 Query: 1055 gatgccatgctgcaccagactgg 1077 ||||| ||||| || |||||||| Sbjct: 253 gatgcgatgctccatcagactgg 275
>gb|AY113019.1| Arabidopsis thaliana AT5g55160/MCO15_11 mRNA, complete cds Length = 312 Score = 133 bits (67), Expect = 2e-27 Identities = 169/203 (83%) Strand = Plus / Plus Query: 875 caggatggcaatgaggttttcttccgcatcaagagatccacacagctcaagaagctgatg 934 |||||||| ||||| || ||||| | ||||||||| ||| |||||||| || |||||| Sbjct: 70 caggatggtaatgaagtcttctttaggatcaagagaagcactcagctcaaaaaactgatg 129 Query: 935 aatgcctactgtgaccgccagtctgtggatctcaattccattgcgttcctttttgatggt 994 ||||| ||||||||||| |||||||||||| |||| || ||||| ||| | ||||||||| Sbjct: 130 aatgcttactgtgaccgtcagtctgtggatttcaactcaattgctttcttgtttgatggt 189 Query: 995 cgtaggctccgtggtgagcagacccccgacgagcttgagatggaagaaggcgatgagatt 1054 ||| | || |||| |||||||| || || |||||||| |||||||| || |||||||| Sbjct: 190 cgtcgtcttcgtgccgagcagactccagatgagcttgaaatggaagatggagatgagatc 249 Query: 1055 gatgccatgctgcaccagactgg 1077 ||||| ||||| || |||||||| Sbjct: 250 gatgcaatgcttcatcagactgg 272
>gb|AY075614.1| Arabidopsis thaliana AT5g55160/MCO15_11 mRNA, complete cds Length = 600 Score = 133 bits (67), Expect = 2e-27 Identities = 169/203 (83%) Strand = Plus / Plus Query: 875 caggatggcaatgaggttttcttccgcatcaagagatccacacagctcaagaagctgatg 934 |||||||| ||||| || ||||| | ||||||||| ||| |||||||| || |||||| Sbjct: 180 caggatggtaatgaagtcttctttaggatcaagagaagcactcagctcaaaaaactgatg 239 Query: 935 aatgcctactgtgaccgccagtctgtggatctcaattccattgcgttcctttttgatggt 994 ||||| ||||||||||| |||||||||||| |||| || ||||| ||| | ||||||||| Sbjct: 240 aatgcttactgtgaccgtcagtctgtggatttcaactcaattgctttcttgtttgatggt 299 Query: 995 cgtaggctccgtggtgagcagacccccgacgagcttgagatggaagaaggcgatgagatt 1054 ||| | || |||| |||||||| || || |||||||| |||||||| || |||||||| Sbjct: 300 cgtcgtcttcgtgccgagcagactccagatgagcttgaaatggaagatggagatgagatc 359 Query: 1055 gatgccatgctgcaccagactgg 1077 ||||| ||||| || |||||||| Sbjct: 360 gatgcaatgcttcatcagactgg 382
>gb|AY072368.1| Arabidopsis thaliana ubiquitin-like protein (At4g26840) mRNA, complete cds Length = 584 Score = 133 bits (67), Expect = 2e-27 Identities = 169/203 (83%) Strand = Plus / Plus Query: 875 caggatggcaatgaggttttcttccgcatcaagagatccacacagctcaagaagctgatg 934 |||||||| || ||||||||||| | ||||||||| ||| |||||||||||||||||| Sbjct: 137 caggatggaaacgaggttttctttaggatcaagagaagcactcagctcaagaagctgatg 196 Query: 935 aatgcctactgtgaccgccagtctgtggatctcaattccattgcgttcctttttgatggt 994 ||||| ||||||||||| || |||||||| | || |||||||| ||| | |||||||| Sbjct: 197 aatgcttactgtgaccggcaatctgtggacatgaactccattgctttcttgtttgatggg 256 Query: 995 cgtaggctccgtggtgagcagacccccgacgagcttgagatggaagaaggcgatgagatt 1054 ||| | || |||| |||||| || ||||| |||||||| ||||| || || |||||||| Sbjct: 257 cgtcgtcttcgtgctgagcaaactcccgatgagcttgacatggaggatggtgatgagatc 316 Query: 1055 gatgccatgctgcaccagactgg 1077 ||||| ||||| || |||||||| Sbjct: 317 gatgcgatgctccatcagactgg 339
>gb|AY086914.1| Arabidopsis thaliana clone 29414 mRNA, complete sequence Length = 710 Score = 133 bits (67), Expect = 2e-27 Identities = 169/203 (83%) Strand = Plus / Plus Query: 875 caggatggcaatgaggttttcttccgcatcaagagatccacacagctcaagaagctgatg 934 |||||||| || ||||||||||| | ||||||||| ||| |||||||||||||||||| Sbjct: 211 caggatggaaacgaggttttctttaggatcaagagaagcactcagctcaagaagctgatg 270 Query: 935 aatgcctactgtgaccgccagtctgtggatctcaattccattgcgttcctttttgatggt 994 ||||| ||||||||||| || |||||||| | || |||||||| ||| | |||||||| Sbjct: 271 aatgcttactgtgaccggcaatctgtggacatgaactccattgctttcttgtttgatggg 330 Query: 995 cgtaggctccgtggtgagcagacccccgacgagcttgagatggaagaaggcgatgagatt 1054 ||| | || |||| |||||| || ||||| |||||||| ||||| || || |||||||| Sbjct: 331 cgtcgtcttcgtgctgagcaaactcccgatgagcttgacatggaggatggtgatgagatc 390 Query: 1055 gatgccatgctgcaccagactgg 1077 ||||| ||||| || |||||||| Sbjct: 391 gatgcgatgctccatcagactgg 413
>gb|AF510520.1| Arabidopsis thaliana small ubiquitin-like modifier 2 (SUMO) mRNA, complete cds Length = 584 Score = 133 bits (67), Expect = 2e-27 Identities = 169/203 (83%) Strand = Plus / Plus Query: 875 caggatggcaatgaggttttcttccgcatcaagagatccacacagctcaagaagctgatg 934 |||||||| ||||| || ||||| | ||||||||| ||| |||||||| || |||||| Sbjct: 164 caggatggtaatgaagtcttctttaggatcaagagaagcactcagctcaaaaaactgatg 223 Query: 935 aatgcctactgtgaccgccagtctgtggatctcaattccattgcgttcctttttgatggt 994 ||||| ||||||||||| |||||||||||| |||| || ||||| ||| | ||||||||| Sbjct: 224 aatgcttactgtgaccgtcagtctgtggatttcaactcaattgctttcttgtttgatggt 283 Query: 995 cgtaggctccgtggtgagcagacccccgacgagcttgagatggaagaaggcgatgagatt 1054 ||| | || |||| |||||||| || || |||||||| |||||||| || |||||||| Sbjct: 284 cgtcgtcttcgtgccgagcagactccagatgagcttgaaatggaagatggagatgagatc 343 Query: 1055 gatgccatgctgcaccagactgg 1077 ||||| ||||| || |||||||| Sbjct: 344 gatgcaatgcttcatcagactgg 366
>gb|AF510519.1| Arabidopsis thaliana small ubiquitin-like modifier 1 (SUMO) mRNA, complete cds Length = 619 Score = 133 bits (67), Expect = 2e-27 Identities = 169/203 (83%) Strand = Plus / Plus Query: 875 caggatggcaatgaggttttcttccgcatcaagagatccacacagctcaagaagctgatg 934 |||||||| || ||||||||||| | ||||||||| ||| |||||||||||||||||| Sbjct: 173 caggatggaaacgaggttttctttaggatcaagagaagcactcagctcaagaagctgatg 232 Query: 935 aatgcctactgtgaccgccagtctgtggatctcaattccattgcgttcctttttgatggt 994 ||||| ||||||||||| || |||||||| | || |||||||| ||| | |||||||| Sbjct: 233 aatgcttactgtgaccggcaatctgtggacatgaactccattgctttcttgtttgatggg 292 Query: 995 cgtaggctccgtggtgagcagacccccgacgagcttgagatggaagaaggcgatgagatt 1054 ||| | || |||| |||||| || ||||| |||||||| ||||| || || |||||||| Sbjct: 293 cgtcgtcttcgtgctgagcaaactcccgatgagcttgacatggaggatggtgatgagatc 352 Query: 1055 gatgccatgctgcaccagactgg 1077 ||||| ||||| || |||||||| Sbjct: 353 gatgcgatgctccatcagactgg 375
>emb|BX828793.1|CNS0A2L0 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL39ZA02 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 599 Score = 133 bits (67), Expect = 2e-27 Identities = 169/203 (83%) Strand = Plus / Plus Query: 875 caggatggcaatgaggttttcttccgcatcaagagatccacacagctcaagaagctgatg 934 |||||||| || ||||||||||| | ||||||||| ||| |||||||||||||||||| Sbjct: 146 caggatggaaacgaggttttctttaggatcaagagaagcactcagctcaagaagctgatg 205 Query: 935 aatgcctactgtgaccgccagtctgtggatctcaattccattgcgttcctttttgatggt 994 ||||| ||||||||||| || |||||||| | || |||||||| ||| | |||||||| Sbjct: 206 aatgcttactgtgaccggcaatctgtggacatgaactccattgctttcttgtttgatggg 265 Query: 995 cgtaggctccgtggtgagcagacccccgacgagcttgagatggaagaaggcgatgagatt 1054 ||| | || |||| |||||| || ||||| |||||||| ||||| || || |||||||| Sbjct: 266 cgtcgtcttcgtgctgagcaaactcccgatgagcttgacatggaggatggtgatgagatc 325 Query: 1055 gatgccatgctgcaccagactgg 1077 ||||| ||||| || |||||||| Sbjct: 326 gatgcgatgctccatcagactgg 348
>gb|AY085191.1| Arabidopsis thaliana clone 13697 mRNA, complete sequence Length = 643 Score = 125 bits (63), Expect = 4e-25 Identities = 168/203 (82%) Strand = Plus / Plus Query: 875 caggatggcaatgaggttttcttccgcatcaagagatccacacagctcaagaagctgatg 934 |||||||| ||||| || ||||| | ||||||||| ||| |||||||| || |||||| Sbjct: 223 caggatggtaatgaagtcttctttaggatcaagagaagcactcagctcaaaaaactgatg 282 Query: 935 aatgcctactgtgaccgccagtctgtggatctcaattccattgcgttcctttttgatggt 994 ||||| ||||||||||| || ||||||||| |||| || ||||| ||| | ||||||||| Sbjct: 283 aatgcttactgtgaccgtcaatctgtggatttcaactcaattgctttcttgtttgatggt 342 Query: 995 cgtaggctccgtggtgagcagacccccgacgagcttgagatggaagaaggcgatgagatt 1054 ||| | || |||| |||||||| || || |||||||| |||||||| || |||||||| Sbjct: 343 cgtcgtcttcgtgccgagcagactccagatgagcttgaaatggaagatggagatgagatc 402 Query: 1055 gatgccatgctgcaccagactgg 1077 ||||| ||||| || |||||||| Sbjct: 403 gatgcaatgcttcatcagactgg 425
>emb|AL161566.2|ATCHRIV66 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 66 Length = 198372 Score = 95.6 bits (48), Expect = 4e-16 Identities = 123/148 (83%) Strand = Plus / Plus Query: 876 aggatggcaatgaggttttcttccgcatcaagagatccacacagctcaagaagctgatga 935 ||||||| || ||||||||||| | ||||||||| ||| ||||||||||||||||||| Sbjct: 2003 aggatggaaacgaggttttctttaggatcaagagaagcactcagctcaagaagctgatga 2062 Query: 936 atgcctactgtgaccgccagtctgtggatctcaattccattgcgttcctttttgatggtc 995 |||| ||||||||||| || |||||||| | || |||||||| ||| | |||||||| | Sbjct: 2063 atgcttactgtgaccggcaatctgtggacatgaactccattgctttcttgtttgatgggc 2122 Query: 996 gtaggctccgtggtgagcagacccccga 1023 || | || |||| |||||| || ||||| Sbjct: 2123 gtcgtcttcgtgctgagcaaactcccga 2150
>emb|AL161565.2|ATCHRIV65 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 65 Length = 198320 Score = 95.6 bits (48), Expect = 4e-16 Identities = 123/148 (83%) Strand = Plus / Plus Query: 876 aggatggcaatgaggttttcttccgcatcaagagatccacacagctcaagaagctgatga 935 ||||||| || ||||||||||| | ||||||||| ||| ||||||||||||||||||| Sbjct: 195323 aggatggaaacgaggttttctttaggatcaagagaagcactcagctcaagaagctgatga 195382 Query: 936 atgcctactgtgaccgccagtctgtggatctcaattccattgcgttcctttttgatggtc 995 |||| ||||||||||| || |||||||| | || |||||||| ||| | |||||||| | Sbjct: 195383 atgcttactgtgaccggcaatctgtggacatgaactccattgctttcttgtttgatgggc 195442 Query: 996 gtaggctccgtggtgagcagacccccga 1023 || | || |||| |||||| || ||||| Sbjct: 195443 gtcgtcttcgtgctgagcaaactcccga 195470
>emb|AL035440.2|ATF10M23 Arabidopsis thaliana DNA chromosome 4, BAC clone F10M23 (ESSA project) Length = 128574 Score = 95.6 bits (48), Expect = 4e-16 Identities = 123/148 (83%) Strand = Plus / Plus Query: 876 aggatggcaatgaggttttcttccgcatcaagagatccacacagctcaagaagctgatga 935 ||||||| || ||||||||||| | ||||||||| ||| ||||||||||||||||||| Sbjct: 46160 aggatggaaacgaggttttctttaggatcaagagaagcactcagctcaagaagctgatga 46219 Query: 936 atgcctactgtgaccgccagtctgtggatctcaattccattgcgttcctttttgatggtc 995 |||| ||||||||||| || |||||||| | || |||||||| ||| | |||||||| | Sbjct: 46220 atgcttactgtgaccggcaatctgtggacatgaactccattgctttcttgtttgatgggc 46279 Query: 996 gtaggctccgtggtgagcagacccccga 1023 || | || |||| |||||| || ||||| Sbjct: 46280 gtcgtcttcgtgctgagcaaactcccga 46307
>dbj|AB010071.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MCO15 Length = 82918 Score = 91.7 bits (46), Expect = 5e-15 Identities = 103/122 (84%) Strand = Plus / Minus Query: 876 aggatggcaatgaggttttcttccgcatcaagagatccacacagctcaagaagctgatga 935 ||||||| ||||| || ||||| | ||||||||| ||| |||||||| || ||||||| Sbjct: 42797 aggatggtaatgaagtcttctttaggatcaagagaagcactcagctcaaaaaactgatga 42738 Query: 936 atgcctactgtgaccgccagtctgtggatctcaattccattgcgttcctttttgatggtc 995 |||| ||||||||||| |||||||||||| |||| || ||||| ||| | |||||||||| Sbjct: 42737 atgcttactgtgaccgtcagtctgtggatttcaactcaattgctttcttgtttgatggtc 42678 Query: 996 gt 997 || Sbjct: 42677 gt 42676
>gb|AF451278.1| Phaseolus vulgaris ubiquitin-like protein SMT3 (SMT3) mRNA, partial cds Length = 449 Score = 87.7 bits (44), Expect = 9e-14 Identities = 164/204 (80%) Strand = Plus / Plus Query: 874 gcaggatggcaatgaggttttcttccgcatcaagagatccacacagctcaagaagctgat 933 ||||||||| |||||||| |||||| | ||||||||| ||| || | || ||||| || Sbjct: 53 gcaggatgggaatgaggtgttcttcaggatcaagagaagcacccaattgaaaaagcttat 112 Query: 934 gaatgcctactgtgaccgccagtctgtggatctcaattccattgcgttcctttttgatgg 993 |||||| || |||||||| ||||| || ||| |||| ||||| || || || |||||||| Sbjct: 113 gaatgcttattgtgaccgacagtcagttgatttcaactccatcgcttttctctttgatgg 172 Query: 994 tcgtaggctccgtggtgagcagacccccgacgagcttgagatggaagaaggcgatgagat 1053 ||| | || |||| ||||||||| || || ||| | || ||||| || || ||||| || Sbjct: 173 acgtcgccttcgtgctgagcagactcctgatgagttggaaatggaggatggtgatgaaat 232 Query: 1054 tgatgccatgctgcaccagactgg 1077 |||||||||||| || |||||||| Sbjct: 233 tgatgccatgcttcatcagactgg 256
>emb|AJ864397.1| Cannabis sativa partial mRNA for ubiquitin-like protein SMT3 (smt3 gene) Length = 283 Score = 77.8 bits (39), Expect = 8e-11 Identities = 81/95 (85%) Strand = Plus / Plus Query: 986 tttgatggtcgtaggctccgtggtgagcagacccccgacgagcttgagatggaagaaggc 1045 |||||||||||| | || || | ||||||||| ||||||||||| || ||||| || || Sbjct: 122 tttgatggtcgtcgccttcgagctgagcagactcccgacgagctggaaatggaggacggt 181 Query: 1046 gatgagattgatgccatgctgcaccagactggagg 1080 |||||||||||||| ||||| ||||| |||||||| Sbjct: 182 gatgagattgatgctatgcttcaccaaactggagg 216
>gb|AC189587.1| Brassica rapa subsp. pekinensis clone KBrH012K23, complete sequence Length = 128564 Score = 67.9 bits (34), Expect = 8e-08 Identities = 64/74 (86%) Strand = Plus / Plus Query: 876 aggatggcaatgaggttttcttccgcatcaagagatccacacagctcaagaagctgatga 935 ||||||| |||||||| ||||| | ||||||||| ||| ||||| ||||||||||||| Sbjct: 55886 aggatgggaatgaggtgttctttaggatcaagagaagcactcagctgaagaagctgatga 55945 Query: 936 atgcctactgtgac 949 |||| ||||||||| Sbjct: 55946 atgcttactgtgac 55959 Score = 48.1 bits (24), Expect = 0.074 Identities = 45/52 (86%) Strand = Plus / Plus Query: 1026 agcttgagatggaagaaggcgatgagattgatgccatgctgcaccagactgg 1077 ||||||| ||||| || || |||||||| ||||||||||| || |||||||| Sbjct: 56118 agcttgacatggaggacggtgatgagatcgatgccatgctccatcagactgg 56169 Score = 46.1 bits (23), Expect = 0.29 Identities = 35/39 (89%) Strand = Plus / Plus Query: 158 cggaggcgcccacatcaacctcaaggtcaaggggcaggt 196 |||||| || |||||||| |||||||||||||| ||||| Sbjct: 55240 cggaggagctcacatcaatctcaaggtcaagggtcaggt 55278
>emb|AJ001901.1|CARNAUP Cicer arietinum mRNA for Ubiquitin protein Length = 552 Score = 67.9 bits (34), Expect = 8e-08 Identities = 124/154 (80%) Strand = Plus / Plus Query: 923 aagaagctgatgaatgcctactgtgaccgccagtctgtggatctcaattccattgcgttc 982 ||||||||||||||||| || ||||| || || |||||||| | ||||| ||||| || Sbjct: 154 aagaagctgatgaatgcatattgtgatcgacaatctgtggacttgaattcaattgccttt 213 Query: 983 ctttttgatggtcgtaggctccgtggtgagcagacccccgacgagcttgagatggaagaa 1042 | ||||||||||| || ||||||| || ||||| || || ||||| || ||||| || Sbjct: 214 ttatttgatggtcgcagactccgtgcagaacagacacctgatgagctagacatggaggat 273 Query: 1043 ggcgatgagattgatgccatgctgcaccagactg 1076 || |||||||| ||||| ||| ||||||| |||| Sbjct: 274 ggagatgagatcgatgcaatgttgcaccaaactg 307
>gb|AC132615.5| Mus musculus BAC clone RP23-301J15 from 9, complete sequence Length = 201718 Score = 48.1 bits (24), Expect = 0.074 Identities = 27/28 (96%) Strand = Plus / Minus Query: 11 tcttcttcttcttcccctgctcctgctc 38 |||||||||||||| ||||||||||||| Sbjct: 168608 tcttcttcttcttctcctgctcctgctc 168581
>emb|AL808116.6| Mouse DNA sequence from clone RP23-97H1 on chromosome X, complete sequence Length = 200519 Score = 48.1 bits (24), Expect = 0.074 Identities = 27/28 (96%) Strand = Plus / Minus Query: 11 tcttcttcttcttcccctgctcctgctc 38 |||||||||||||| ||||||||||||| Sbjct: 122512 tcttcttcttcttctcctgctcctgctc 122485
>gb|AC168266.2| Mus musculus BAC clone RP24-245G1 from chromosome 9, complete sequence Length = 188778 Score = 48.1 bits (24), Expect = 0.074 Identities = 27/28 (96%) Strand = Plus / Plus Query: 11 tcttcttcttcttcccctgctcctgctc 38 |||||||||||||| ||||||||||||| Sbjct: 104366 tcttcttcttcttctcctgctcctgctc 104393
>ref|NM_119536.3| Arabidopsis thaliana unknown protein (AT4G33780) mRNA, complete cds Length = 979 Score = 46.1 bits (23), Expect = 0.29 Identities = 23/23 (100%) Strand = Plus / Minus Query: 1037 gaagaaggcgatgagattgatgc 1059 ||||||||||||||||||||||| Sbjct: 59 gaagaaggcgatgagattgatgc 37
>gb|AY086625.1| Arabidopsis thaliana clone 263734 mRNA, complete sequence Length = 964 Score = 46.1 bits (23), Expect = 0.29 Identities = 23/23 (100%) Strand = Plus / Minus Query: 1037 gaagaaggcgatgagattgatgc 1059 ||||||||||||||||||||||| Sbjct: 59 gaagaaggcgatgagattgatgc 37
>emb|AL161584.2|ATCHRIV80 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 80 Length = 192861 Score = 46.1 bits (23), Expect = 0.29 Identities = 23/23 (100%) Strand = Plus / Plus Query: 1037 gaagaaggcgatgagattgatgc 1059 ||||||||||||||||||||||| Sbjct: 37136 gaagaaggcgatgagattgatgc 37158
>emb|AL031394.1|ATT16L1 Arabidopsis thaliana DNA chromosome 4, BAC clone T16L1 (ESSAII project) Length = 98124 Score = 46.1 bits (23), Expect = 0.29 Identities = 23/23 (100%) Strand = Plus / Plus Query: 1037 gaagaaggcgatgagattgatgc 1059 ||||||||||||||||||||||| Sbjct: 84354 gaagaaggcgatgagattgatgc 84376
>dbj|AP006636.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT47I16, TM0208a, complete sequence Length = 32967 Score = 46.1 bits (23), Expect = 0.29 Identities = 26/27 (96%) Strand = Plus / Plus Query: 11 tcttcttcttcttcccctgctcctgct 37 ||||||||||||||||||||| ||||| Sbjct: 18384 tcttcttcttcttcccctgctgctgct 18410
>gb|BT001936.1| Arabidopsis thaliana clone C105400 unknown protein (At4g33780) mRNA, complete cds Length = 643 Score = 46.1 bits (23), Expect = 0.29 Identities = 23/23 (100%) Strand = Plus / Minus Query: 1037 gaagaaggcgatgagattgatgc 1059 ||||||||||||||||||||||| Sbjct: 35 gaagaaggcgatgagattgatgc 13
>gb|U46669.2| Caenorhabditis elegans cosmid C41G11, complete sequence Length = 29288 Score = 44.1 bits (22), Expect = 1.2 Identities = 25/26 (96%) Strand = Plus / Minus Query: 12 cttcttcttcttcccctgctcctgct 37 ||||||||||||| |||||||||||| Sbjct: 11573 cttcttcttcttctcctgctcctgct 11548
>emb|AL139381.24| Human DNA sequence from clone RP11-74A12 on chromosome 13q31.2-32.2 Contains the 3' end of the ABCC4 gene for ATP-binding cassette, sub-family C (CFTR/MRP), member 4 and 2 CpG islands, complete sequence Length = 116021 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 369 ggctctgtagtctgtagatcca 390 |||||||||||||||||||||| Sbjct: 53406 ggctctgtagtctgtagatcca 53385
>emb|BX828962.1|CNS0A3EP Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL55ZB08 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 700 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1037 gaagaaggcgatgagattgatg 1058 |||||||||||||||||||||| Sbjct: 22 gaagaaggcgatgagattgatg 1
>gb|DQ672601.1| Lycopersicon esculentum cultivar Ailsa Craig leucine-rich repeat family protein, putative polyprotein, auxin repressed/dormancy associated protein, putative zinc finger protein, putative protease/hydrolase, mitochondrial amino acid carrier, squamosa promoter binding-like protein, putative retroelement pol polyprotein, and Dof zinc finger protein genes, complete cds Length = 94860 Score = 42.1 bits (21), Expect = 4.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 5 ctcgagtcttcttcttcttcc 25 ||||||||||||||||||||| Sbjct: 72053 ctcgagtcttcttcttcttcc 72073
>ref|NM_202585.2| Arabidopsis thaliana unknown protein (AT3G14850) mRNA, complete cds Length = 1171 Score = 42.1 bits (21), Expect = 4.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 11 tcttcttcttcttcccctgct 31 ||||||||||||||||||||| Sbjct: 78 tcttcttcttcttcccctgct 98
>gb|AC150393.2| Branchiostoma floridae clone CH302-13E12, complete sequence Length = 207808 Score = 42.1 bits (21), Expect = 4.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 175 acctcaaggtcaaggggcagg 195 ||||||||||||||||||||| Sbjct: 79381 acctcaaggtcaaggggcagg 79401
>gb|AC087546.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone nbxb0012D19, complete sequence Length = 153276 Score = 42.1 bits (21), Expect = 4.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 72 tcctcggcggcgcggcacagc 92 ||||||||||||||||||||| Sbjct: 75973 tcctcggcggcgcggcacagc 75993
>gb|AF153420.1| Brassica juncea Pusa Jaikisan plastidic delta-9-stearoyl-acyl-acyl carrier protein desaturase (fab2) gene, complete cds; nuclear gene for plastid product Length = 2023 Score = 42.1 bits (21), Expect = 4.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 12 cttcttcttcttcccctgctc 32 ||||||||||||||||||||| Sbjct: 104 cttcttcttcttcccctgctc 124
>gb|AC009030.10| Homo sapiens chromosome 16 clone RP11-13G6, complete sequence Length = 189379 Score = 42.1 bits (21), Expect = 4.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 759 ccaggaaataaattggtttta 779 ||||||||||||||||||||| Sbjct: 87884 ccaggaaataaattggtttta 87904
>gb|CP000264.1| Jannaschia sp. CCS1, complete genome Length = 4317977 Score = 42.1 bits (21), Expect = 4.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1046 gatgagattgatgccatgctg 1066 ||||||||||||||||||||| Sbjct: 1583624 gatgagattgatgccatgctg 1583644
>gb|AC011495.8| Homo sapiens chromosome 19 clone CTB-33G10, complete sequence Length = 209844 Score = 42.1 bits (21), Expect = 4.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 221 gtcttcccctctccttttctt 241 ||||||||||||||||||||| Sbjct: 97883 gtcttcccctctccttttctt 97903
>gb|AC119740.6| Homo sapiens 3 BAC RP11-657M13 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 104418 Score = 42.1 bits (21), Expect = 4.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 222 tcttcccctctccttttcttt 242 ||||||||||||||||||||| Sbjct: 62556 tcttcccctctccttttcttt 62576
>ref|NM_001035367.1| Bos taurus similar to Aldo-keto reductase family 1 member C3 (Trans-1,2-dihydrobenzene-1,2-diol dehydrogenase) (3-alpha-hydroxysteroid dehydrogenase, type 2) (3-alpha-HSD, type 2) (3-alpha-HSD type II, brain) (Prostaglandin F synthase) (PGFS) (Estradiol 17-be... (MGC127831), mRNA gb|BC102646.1| Bos taurus similar to Aldo-keto reductase family 1 member C3 (Trans-1,2-dihydrobenzene-1,2-diol dehydrogenase) (3-alpha-hydroxysteroid dehydrogenase, type 2) (3-alpha-HSD, type 2) (3-alpha-HSD type II, brain) (Prostaglandin F synthase) (PGFS) (Estradiol 1, mRNA (cDNA clone MGC:127831 IMAGE:7955855), complete cds Length = 1425 Score = 42.1 bits (21), Expect = 4.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1164 aagaagtgaatgaacttttgaagcc 1188 |||||||| |||||||||||||||| Sbjct: 1297 aagaagtgtatgaacttttgaagcc 1321
>gb|AC067903.13| Homo sapiens, clone RP11-740O11, complete sequence Length = 198410 Score = 42.1 bits (21), Expect = 4.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 771 ttggttttattgcttcatagt 791 ||||||||||||||||||||| Sbjct: 150834 ttggttttattgcttcatagt 150854
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10 Length = 22685906 Score = 42.1 bits (21), Expect = 4.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 72 tcctcggcggcgcggcacagc 92 ||||||||||||||||||||| Sbjct: 15017354 tcctcggcggcgcggcacagc 15017374
>gb|AC162947.2| Mus musculus BAC clone RP23-12D16 from chromosome 8, complete sequence Length = 230889 Score = 42.1 bits (21), Expect = 4.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 222 tcttcccctctccttttcttt 242 ||||||||||||||||||||| Sbjct: 71089 tcttcccctctccttttcttt 71069
>gb|AF230696.1| Brassica rapa cultivar R500 stearoyl-ACP desaturase (DELTA9-BR-3) gene, partial cds Length = 594 Score = 42.1 bits (21), Expect = 4.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 12 cttcttcttcttcccctgctc 32 ||||||||||||||||||||| Sbjct: 63 cttcttcttcttcccctgctc 83
>gb|AF289220.1|AF289220 Homo sapiens Bcl-2 related proline-rich protein (BCL2L12) gene, complete cds, alternatively spliced Length = 9700 Score = 42.1 bits (21), Expect = 4.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 221 gtcttcccctctccttttctt 241 ||||||||||||||||||||| Sbjct: 7187 gtcttcccctctccttttctt 7207
>dbj|AP002061.1| Arabidopsis thaliana genomic DNA, chromosome 3, BAC clone: T21E2 Length = 47466 Score = 42.1 bits (21), Expect = 4.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 11 tcttcttcttcttcccctgct 31 ||||||||||||||||||||| Sbjct: 39172 tcttcttcttcttcccctgct 39192
>dbj|AB025632.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MQJ2 Length = 51440 Score = 42.1 bits (21), Expect = 4.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 342 gtcgccgatgggcttgtttag 362 ||||||||||||||||||||| Sbjct: 13019 gtcgccgatgggcttgtttag 13039
>gb|AC130449.2| Homo sapiens chromosome 16 clone CTA-233A7, complete sequence Length = 175104 Score = 42.1 bits (21), Expect = 4.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 759 ccaggaaataaattggtttta 779 ||||||||||||||||||||| Sbjct: 127781 ccaggaaataaattggtttta 127761
>emb|BX826284.1|CNS0A54D Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL9ZF08 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1085 Score = 42.1 bits (21), Expect = 4.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 11 tcttcttcttcttcccctgct 31 ||||||||||||||||||||| Sbjct: 49 tcttcttcttcttcccctgct 69
>gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete sequence Length = 2648638 Score = 42.1 bits (21), Expect = 4.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 67 tcagctcctcggcggcgcggc 87 ||||||||||||||||||||| Sbjct: 903831 tcagctcctcggcggcgcggc 903811
>gb|AC127086.4| Mus musculus BAC clone RP24-540I5 from 8, complete sequence Length = 161316 Score = 42.1 bits (21), Expect = 4.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 222 tcttcccctctccttttcttt 242 ||||||||||||||||||||| Sbjct: 74194 tcttcccctctccttttcttt 74174
>dbj|AP005015.1| Homo sapiens genomic DNA, chromosome 8q23, clone:KB1246B1, complete sequence Length = 141444 Score = 42.1 bits (21), Expect = 4.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 771 ttggttttattgcttcatagt 791 ||||||||||||||||||||| Sbjct: 24291 ttggttttattgcttcatagt 24311 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 209,850,296 Number of extensions: 12553370 Number of successful extensions: 867113 Number of sequences better than 10.0: 68 Number of HSP's gapped: 867104 Number of HSP's successfully gapped: 94 Length of query: 1202 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1179 Effective length of database: 18,503,978,556 Effective search space: 21816190717524 Effective search space used: 21816190717524 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)