ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf148b05 |
|---|---|
| Clone Library Name | barley_pub |
>Q941R4:GONS1_ARATH GDP-mannose transporter - Arabidopsis thaliana (Mouse-ear cress)| Length = 333 Score = 66.2 bits (160), Expect = 3e-10 Identities = 45/176 (25%), Positives = 82/176 (46%), Gaps = 2/176 (1%) Frame = +2 Query: 182 EDGSVEKTGAWNNTWNTLMRHASVYGVAAGYCLSASLLSIINKWAIMKFPYPGALTALQY 361 EDG K+G + A + G+A YC+S+ + ++NK+ + + + + + Y Sbjct: 12 EDGKTVKSGGDKPIPRKIHNRALLSGLA--YCISSCSMILVNKFVLSSYNFNAGIFLMLY 69 Query: 362 LTSVAGVLLCG--QLKLIEPDRLNLRTMWKFLPAAVMFYISIFTNSELLMHANVDTFIVF 535 V+ +++ G + LI + L LR M + P V+F + T+ L + NV V Sbjct: 70 QNFVSVIIVVGLSLMGLITTEPLTLRLMKVWFPVNVIFVGMLITSMFSLKYINVAMVTVL 129 Query: 536 RSAVPIFVAIGETLYLHQPCPSFKTWLSLSTILGGSVIYVFTDNQFTLTAYSWAIA 703 ++ + A+GE +YL + W +L ++ +V TD F Y+W IA Sbjct: 130 KNVTNVITAVGE-MYLFNKQHDNRVWAALFLMIISAVSGGITDLSFNAVGYAWQIA 184
>Q95YI5:US74C_DROME UDP-sugar transporter UST74c - Drosophila melanogaster (Fruit fly)| Length = 373 Score = 42.4 bits (98), Expect = 0.005 Identities = 41/176 (23%), Positives = 78/176 (44%), Gaps = 2/176 (1%) Frame = +2 Query: 257 GVAAGYCLSASLLSIINKWAIMKFPYPGAL-TALQYLTSVAGVLLCGQ-LKLIEPDRLNL 430 G A Y LS+ +++++NK + + +P L +L LT+ VL G+ LKL+ L Sbjct: 65 GSALFYGLSSFMITVVNKTVLTSYHFPSFLFLSLGQLTASIVVLGMGKRLKLVNFPPLQR 124 Query: 431 RTMWKFLPAAVMFYISIFTNSELLMHANVDTFIVFRSAVPIFVAIGETLYLHQPCPSFKT 610 T K P ++F ++ ++ F R + + E L PS Sbjct: 125 NTFAKIFPLPLIFLGNMMFGLGGTKTLSLPMFAALRRFSILMTMLLELKILGLR-PSNAV 183 Query: 611 WLSLSTILGGSVIYVFTDNQFTLTAYSWAIAYLASMSIDFVYIKHVVMTIGLNTWG 778 +S+ ++GG+++ D F + Y + + A + + VY+K + T + +G Sbjct: 184 QVSVYAMIGGALLAASDDLSFNMRGYIYVMITNALTASNGVYVKKKLDTSEIGKYG 239
>Q94B38:GPT2_ARATH Glucose-6-phosphate/phosphate translocator 2, chloroplast precursor| - Arabidopsis thaliana (Mouse-ear cress) Length = 388 Score = 42.4 bits (98), Expect = 0.005 Identities = 39/181 (21%), Positives = 69/181 (38%), Gaps = 1/181 (0%) Frame = +2 Query: 161 NLSEPSKEDGSVEKTGAWNNTWNTLMRHASVYGVAAGYCLSASLLSIINKWAIMKFPYPG 340 N+ P ++ K G + TW L ++Y NK + FPYP Sbjct: 83 NIELPDEQSAQKLKIGIYFATWWALNVVFNIY----------------NKKVLNAFPYPW 126 Query: 341 ALTALQYLTSVAGVLLCGQLKLIEPDRLNLRTMWKFL-PAAVMFYISIFTNSELLMHANV 517 + L +L+ ++ + + +L WK L P AV I + + V Sbjct: 127 LTSTLSLACGSLMMLVSWATRIADAPKTDLE-FWKTLFPVAVAHTIGHVAATVSMSKVAV 185 Query: 518 DTFIVFRSAVPIFVAIGETLYLHQPCPSFKTWLSLSTILGGSVIYVFTDNQFTLTAYSWA 697 + +S P F + ++ + P +LSL I+GG + T+ F +T + A Sbjct: 186 SFTHIIKSGEPAFSVLVSRFFMGETFP-LPVYLSLLPIIGGCALAAITELNFNITGFMGA 244 Query: 698 I 700 + Sbjct: 245 M 245
>P49133:TPT_MAIZE Triose phosphate/phosphate translocator, chloroplast precursor -| Zea mays (Maize) Length = 409 Score = 41.2 bits (95), Expect = 0.012 Identities = 35/151 (23%), Positives = 61/151 (40%) Frame = +2 Query: 290 LLSIINKWAIMKFPYPGALTALQYLTSVAGVLLCGQLKLIEPDRLNLRTMWKFLPAAVMF 469 + +I+NK FPYP ++ + + V L+ + L + +N + P A+ Sbjct: 121 IFNILNKKIYNYFPYPYFVSLIHLVVGVVYCLISWSVGLPKRAPINGTLLKLLFPVALCH 180 Query: 470 YISIFTNSELLMHANVDTFIVFRSAVPIFVAIGETLYLHQPCPSFKTWLSLSTILGGSVI 649 I T++ V ++ P F A L Q P F WLSL+ ++ G + Sbjct: 181 GIGHITSNVSFAAVAVSFAHTIKALEPFFSAAATQFILGQQVP-FSLWLSLAPVVIGVSM 239 Query: 650 YVFTDNQFTLTAYSWAIAYLASMSIDFVYIK 742 T+ F T + A+ S + +Y K Sbjct: 240 ASLTELSFNWTGFINAMISNISFTYRSIYSK 270
>P52177:TPT1_BRAOB Triose phosphate/phosphate translocator, chloroplast precursor -| Brassica oleracea var. botrytis (Cauliflower) Length = 407 Score = 40.4 bits (93), Expect = 0.020 Identities = 35/151 (23%), Positives = 65/151 (43%), Gaps = 2/151 (1%) Frame = +2 Query: 290 LLSIINKWAIMKFPYPGALTALQYLTSVAGVLLCGQLKLIEPDRLNLRTMWKFLPAAVMF 469 + +I+NK FPYP ++ + V L+ + L + +N + +P AV Sbjct: 118 IFNILNKKIYNYFPYPYFVSVIHLFVGVVYCLVSWSVGLPKRAPVNSDILKVLIPVAVCH 177 Query: 470 YISIFTNSELLMHANVDTFIVFRSAVPIFVAIGETLYLHQPCPSFKTWLSLSTILGGSVI 649 I T++ V ++ P F A L QP P WLSL+ ++ G + Sbjct: 178 AIGHVTSNVSFAAVAVSFTHTIKALEPFFNASASQFLLGQPIP-ITLWLSLAPVVLGVAM 236 Query: 650 YVFTDNQFTLTAYSWAIAYLASM--SIDFVY 736 T+ +++W + ++++M +I F Y Sbjct: 237 ASLTE-----LSFNW-LGFISAMISNISFTY 261
>Q9M5A9:GPT1_ARATH Glucose-6-phosphate/phosphate translocator 1, chloroplast precursor -| Arabidopsis thaliana (Mouse-ear cress) Length = 388 Score = 39.7 bits (91), Expect = 0.035 Identities = 55/283 (19%), Positives = 101/283 (35%), Gaps = 4/283 (1%) Frame = +2 Query: 290 LLSIINKWAIMKFPYPGALTALQYLTSVAGVLLCGQLKLIEPDRLNLRTMWKFL-PAAVM 466 + +I NK + +PYP + L +L+ + ++E + + WK L P AV Sbjct: 110 VFNIYNKKVLNAYPYPWLTSTLSLAAGSLMMLISWAVGIVETPKTDF-DFWKTLFPVAVA 168 Query: 467 FYISIFTNSELLMHANVDTFIVFRSAVPIFVAIGETLYLHQPCPSFKTWLSLSTILGGSV 646 I + + V + +S P F + L + P+ +LSL I+GG Sbjct: 169 HTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFILGETFPT-SVYLSLIPIIGGCA 227 Query: 647 IYVFTDNQFTLTAYSWAIAYLASMSIDFVYIKHVV---MTIGLNTWGXXXXXXXXXXXXX 817 + T+ F + + A+ + ++ K + G+N + Sbjct: 228 LSALTELNFNMIGFMGAMISNLAFVFRNIFSKKGMKGKSVSGMNYYA----CLSMLSLLI 283 Query: 818 XXXXXIMGEFNQMKVDSSKMTTNWLSYDVVLPVAXXXXXXXXXXXXXXXXRRAISATGFT 997 I E QM VD + + V V IS F+ Sbjct: 284 LTPFAIAVEGPQMWVDGWQTALATVGPQFVWWVVAQSVFYHLYNQVSYMSLDQISPLTFS 343 Query: 998 VLGIVNKLLTVVINLLIWDKHASLVGTIGLLICMSGGVLYQQS 1126 V + ++ +V +++I+ V +G I + G LY Q+ Sbjct: 344 VGNTMKRISVIVSSIIIFRTPVQPVNALGAAIAILGTFLYSQA 386
>P11869:TPT_SPIOL Triose phosphate/phosphate translocator, chloroplast precursor -| Spinacia oleracea (Spinach) Length = 404 Score = 37.0 bits (84), Expect = 0.22 Identities = 33/151 (21%), Positives = 59/151 (39%) Frame = +2 Query: 290 LLSIINKWAIMKFPYPGALTALQYLTSVAGVLLCGQLKLIEPDRLNLRTMWKFLPAAVMF 469 + +I+NK FPYP ++ + V L + L + ++ + + +P AV Sbjct: 115 IFNILNKKIYNYFPYPYFVSVIHLFVGVVYCLASWSVGLPKRAPMDSKLLKLLIPVAVCH 174 Query: 470 YISIFTNSELLMHANVDTFIVFRSAVPIFVAIGETLYLHQPCPSFKTWLSLSTILGGSVI 649 I T++ V ++ P F A L Q P WLSL+ ++ G + Sbjct: 175 AIGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFVLGQSIP-ITLWLSLAPVVIGVSM 233 Query: 650 YVFTDNQFTLTAYSWAIAYLASMSIDFVYIK 742 T+ F + A+ S + +Y K Sbjct: 234 ASLTELSFNWLGFISAMISNVSFTYRSLYSK 264
>Q589B8:RPOC2_SILLA DNA-directed RNA polymerase beta'' chain - Silene latifolia (White| campion) (Bladder campion) Length = 1373 Score = 35.4 bits (80), Expect = 0.65 Identities = 27/94 (28%), Positives = 41/94 (43%), Gaps = 3/94 (3%) Frame = +1 Query: 589 TMPIFQDMALTFHYTWWKCDICFHG*PVHPDCLQLGDS---LSGEHVY*FRVHQTCRHDH 759 T PI T T W C +C+ P H D ++LG++ ++G+ + T Sbjct: 280 TQPIAIRTPFTCRSTSWICRLCYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQLTL---- 335 Query: 760 RVEHMGPCALQQP*GSAAVPT*APYNGRVQSDEG 861 R H G G A APYNG+++ +EG Sbjct: 336 RTFHTGGVFT----GGTAEHVRAPYNGKIKFNEG 365
>Q2JJZ9:UPPP_SYNJB Undecaprenyl-diphosphatase - Synechococcus sp. (strain| JA-2-3B'a(2-13)) (Cyanobacteria bacterium Yellowstone B-Prime) Length = 277 Score = 35.0 bits (79), Expect = 0.85 Identities = 39/162 (24%), Positives = 71/162 (43%), Gaps = 3/162 (1%) Frame = +2 Query: 116 LATMAPARVGRFQMSNLSEPS-KEDGSVEKTGAWNNTWNTLMRHASVY-GVA-AGYCLSA 286 L +A A +G + +E + K + G W+ W L + S+ GV+ +G L+A Sbjct: 123 LWVIATAAIGLAVLLGWAEQTGKRQRDLHSLGIWDGIWVGLAQALSLIPGVSRSGSTLTA 182 Query: 287 SLLSIINKWAIMKFPYPGALTALQYLTSVAGVLLCGQLKLIEPDRLNLRTMWKFLPAAVM 466 L + + A ++ + + AL +L V + + + + P L L A V Sbjct: 183 GLFLHLQRSAAARYSFLLGIPAL-FLAGVVEFISEFEAEALLPQGLGT------LSAFVF 235 Query: 467 FYISIFTNSELLMHANVDTFIVFRSAVPIFVAIGETLYLHQP 592 Y+SI + L ++ FIV+R +F+ +G L +P Sbjct: 236 SYLSIDWLIQFLQRSSTWLFIVYRIGFGLFIILGLALGFLRP 277
>P21727:TPT_PEA Triose phosphate/phosphate translocator, chloroplast precursor -| Pisum sativum (Garden pea) Length = 402 Score = 34.7 bits (78), Expect = 1.1 Identities = 32/151 (21%), Positives = 59/151 (39%) Frame = +2 Query: 290 LLSIINKWAIMKFPYPGALTALQYLTSVAGVLLCGQLKLIEPDRLNLRTMWKFLPAAVMF 469 + +I+NK FPYP ++ + V L+ + L + ++ + +P AV Sbjct: 113 IFNILNKKIYNYFPYPYFVSVIHLAVGVVYCLVSWTVGLPKRAPIDGNLLKLLIPVAVCH 172 Query: 470 YISIFTNSELLMHANVDTFIVFRSAVPIFVAIGETLYLHQPCPSFKTWLSLSTILGGSVI 649 + T++ V ++ P F A L Q P WLSL+ ++ G + Sbjct: 173 ALGHVTSNVSFAAVAVSFTHTVKALEPFFNAAASQFILGQSIP-ITLWLSLAPVVIGVSM 231 Query: 650 YVFTDNQFTLTAYSWAIAYLASMSIDFVYIK 742 T+ F + A+ S + +Y K Sbjct: 232 ASLTELSFNWLGFISAMISNISFTYRSIYSK 262
>Q3BAQ2:RPOC2_PHAAO DNA-directed RNA polymerase beta'' chain - Phalaenopsis aphrodite| subsp. formosana (Moth orchid) Length = 1388 Score = 34.7 bits (78), Expect = 1.1 Identities = 26/92 (28%), Positives = 40/92 (43%), Gaps = 3/92 (3%) Frame = +1 Query: 595 PIFQDMALTFHYTWWKCDICFHG*PVHPDCLQLGDS---LSGEHVY*FRVHQTCRHDHRV 765 PI+ T T W C +C+ P H D ++LG++ ++G+ + T R Sbjct: 285 PIYIRTPFTCRSTSWICQLCYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQLTL----RT 340 Query: 766 EHMGPCALQQP*GSAAVPT*APYNGRVQSDEG 861 H G G A AP NG+++ DEG Sbjct: 341 FHTGGVFT----GGTAEHVRAPSNGKIKFDEG 368
>P12227:RPOC2_PEA DNA-directed RNA polymerase beta'' chain - Pisum sativum (Garden| pea) Length = 1163 Score = 34.3 bits (77), Expect = 1.5 Identities = 14/39 (35%), Positives = 22/39 (56%) Frame = +1 Query: 589 TMPIFQDMALTFHYTWWKCDICFHG*PVHPDCLQLGDSL 705 T PIF T T W C +C+ P+H D ++LG+++ Sbjct: 76 TQPIFIRTPFTCRNTSWICRLCYGRSPIHGDLVELGEAV 114
>P49131:TPT_FLAPR Triose phosphate/phosphate translocator, chloroplast precursor -| Flaveria pringlei Length = 408 Score = 33.9 bits (76), Expect = 1.9 Identities = 33/151 (21%), Positives = 58/151 (38%) Frame = +2 Query: 290 LLSIINKWAIMKFPYPGALTALQYLTSVAGVLLCGQLKLIEPDRLNLRTMWKFLPAAVMF 469 + +I+NK FPYP ++A+ V L + L + ++ + +P A Sbjct: 119 IFNILNKKIYNYFPYPYFVSAIHLAVGVVYCLGGWAVGLPKRAPMDSNLLKLLIPVAFCH 178 Query: 470 YISIFTNSELLMHANVDTFIVFRSAVPIFVAIGETLYLHQPCPSFKTWLSLSTILGGSVI 649 + T++ V +S P F A L Q P WLSL+ ++ G + Sbjct: 179 ALGHVTSNVSFAAVAVSFTHTIKSLEPFFNAAASQFILGQSIP-ITLWLSLAPVVIGVSM 237 Query: 650 YVFTDNQFTLTAYSWAIAYLASMSIDFVYIK 742 T+ F + A+ S + +Y K Sbjct: 238 ASLTELSFNWLGFISAMISNISFTYRSIYSK 268
>P29463:TPT_SOLTU Triose phosphate/phosphate translocator, chloroplast precursor -| Solanum tuberosum (Potato) Length = 414 Score = 33.5 bits (75), Expect = 2.5 Identities = 31/151 (20%), Positives = 58/151 (38%) Frame = +2 Query: 290 LLSIINKWAIMKFPYPGALTALQYLTSVAGVLLCGQLKLIEPDRLNLRTMWKFLPAAVMF 469 + +I+NK FPYP ++ + V L+ + L + ++ + P A Sbjct: 125 IFNILNKKIYNYFPYPYFVSVIHLAVGVVYCLVSWGVGLPKRAPIDSTQLKLLTPVAFCH 184 Query: 470 YISIFTNSELLMHANVDTFIVFRSAVPIFVAIGETLYLHQPCPSFKTWLSLSTILGGSVI 649 + T++ V ++ P F A L Q P WLSL+ ++ G + Sbjct: 185 ALGHVTSNVSFAAVRVSFTHTVKALEPFFNAAASQFILGQQIP-LALWLSLAPVVLGVSM 243 Query: 650 YVFTDNQFTLTAYSWAIAYLASMSIDFVYIK 742 T+ F ++ A+ S + +Y K Sbjct: 244 ASLTELSFNWLGFTSAMISNISFTYRSIYSK 274
>Q9THV5:RPOC2_SINAL DNA-directed RNA polymerase beta'' chain - Sinapis alba (White| mustard) (Brassica hirta) Length = 1384 Score = 33.1 bits (74), Expect = 3.2 Identities = 26/93 (27%), Positives = 40/93 (43%), Gaps = 3/93 (3%) Frame = +1 Query: 589 TMPIFQDMALTFHYTWWKCDICFHG*PVHPDCLQLGDS---LSGEHVY*FRVHQTCRHDH 759 T PI T T W C +C+ P H D ++LG++ ++G+ + T Sbjct: 286 TQPISIRTPFTCRSTSWICRLCYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQLTL---- 341 Query: 760 RVEHMGPCALQQP*GSAAVPT*APYNGRVQSDE 858 R H G G A APYNG+++ +E Sbjct: 342 RTFHTGGVFT----GGTAEHVRAPYNGKIKFNE 370
>Q9XPS9:RPOC2_WHEAT DNA-directed RNA polymerase beta'' chain - Triticum aestivum| (Wheat) Length = 1479 Score = 32.3 bits (72), Expect = 5.5 Identities = 13/42 (30%), Positives = 21/42 (50%) Frame = +1 Query: 580 PSPTMPIFQDMALTFHYTWWKCDICFHG*PVHPDCLQLGDSL 705 P PI+ T T W C +C+ P H D ++LG+++ Sbjct: 282 PFRAQPIYIRTPFTCRSTSWICQLCYGRSPTHSDLVELGEAV 323
>Q8HVY3:RPOC2_SOYBN DNA-directed RNA polymerase beta'' chain - Glycine max (Soybean)| Length = 1386 Score = 32.3 bits (72), Expect = 5.5 Identities = 26/93 (27%), Positives = 39/93 (41%), Gaps = 3/93 (3%) Frame = +1 Query: 589 TMPIFQDMALTFHYTWWKCDICFHG*PVHPDCLQLGDS---LSGEHVY*FRVHQTCRHDH 759 T PI T T W C +C+ P H ++LG++ ++G+ + T Sbjct: 280 TQPISIRTPFTCRNTSWICRLCYGQSPTHGHLVELGEAVGIIAGQSIGEPGTQLTL---- 335 Query: 760 RVEHMGPCALQQP*GSAAVPT*APYNGRVQSDE 858 R H G G A APYNG++Q +E Sbjct: 336 RTFHTGGVFT----GGTAEQVRAPYNGKIQFNE 364
>Q9BBS7:RPOC2_LOTJA DNA-directed RNA polymerase beta'' chain - Lotus japonicus| Length = 1332 Score = 32.3 bits (72), Expect = 5.5 Identities = 13/39 (33%), Positives = 22/39 (56%) Frame = +1 Query: 589 TMPIFQDMALTFHYTWWKCDICFHG*PVHPDCLQLGDSL 705 T PIF T T W C +C+ P+H + ++LG+++ Sbjct: 280 TQPIFIRTPFTCRNTSWICRLCYGRSPIHGNLVELGEAV 318
>A1EA00:RPOC2_AGRST DNA-directed RNA polymerase beta'' chain - Agrostis stolonifera| (Creeping bentgrass) Length = 1466 Score = 32.3 bits (72), Expect = 5.5 Identities = 13/42 (30%), Positives = 21/42 (50%) Frame = +1 Query: 580 PSPTMPIFQDMALTFHYTWWKCDICFHG*PVHPDCLQLGDSL 705 P PI+ T T W C +C+ P H D ++LG+++ Sbjct: 282 PFRAQPIYIRTPFTCRSTSWICQLCYGRSPTHSDLVELGEAV 323
>Q01923:RPOC2_SORBI DNA-directed RNA polymerase beta'' chain - Sorghum bicolor| (Sorghum) (Sorghum vulgare) Length = 1520 Score = 32.0 bits (71), Expect = 7.2 Identities = 13/42 (30%), Positives = 21/42 (50%) Frame = +1 Query: 580 PSPTMPIFQDMALTFHYTWWKCDICFHG*PVHPDCLQLGDSL 705 P PI+ T T W C +C+ P H D ++LG+++ Sbjct: 282 PFRAQPIYIRTPFTCRSTSWICQLCYGRSPTHGDLVELGEAV 323
>Q6ENX1:RPOC2_SACOF DNA-directed RNA polymerase beta'' chain - Saccharum officinarum| (Sugarcane) Length = 1534 Score = 32.0 bits (71), Expect = 7.2 Identities = 13/42 (30%), Positives = 21/42 (50%) Frame = +1 Query: 580 PSPTMPIFQDMALTFHYTWWKCDICFHG*PVHPDCLQLGDSL 705 P PI+ T T W C +C+ P H D ++LG+++ Sbjct: 282 PFRAQPIYIRTPFTCRSTSWICQLCYGRSPTHGDLVELGEAV 323
>Q6L3A5:RPOC2_SACHY DNA-directed RNA polymerase beta'' chain - Saccharum hybrid| (Sugarcane) Length = 1534 Score = 32.0 bits (71), Expect = 7.2 Identities = 13/42 (30%), Positives = 21/42 (50%) Frame = +1 Query: 580 PSPTMPIFQDMALTFHYTWWKCDICFHG*PVHPDCLQLGDSL 705 P PI+ T T W C +C+ P H D ++LG+++ Sbjct: 282 PFRAQPIYIRTPFTCRSTSWICQLCYGRSPTHGDLVELGEAV 323
>P16025:RPOC2_MAIZE DNA-directed RNA polymerase beta'' chain - Zea mays (Maize)| Length = 1527 Score = 32.0 bits (71), Expect = 7.2 Identities = 13/42 (30%), Positives = 21/42 (50%) Frame = +1 Query: 580 PSPTMPIFQDMALTFHYTWWKCDICFHG*PVHPDCLQLGDSL 705 P PI+ T T W C +C+ P H D ++LG+++ Sbjct: 282 PFRAQPIYIRTPFTCRSTSWICQLCYGRSPTHGDLVELGEAV 323
>Q3UH66:WNK2_MOUSE Serine/threonine-protein kinase WNK2 - Mus musculus (Mouse)| Length = 2149 Score = 31.6 bits (70), Expect = 9.4 Identities = 17/37 (45%), Positives = 22/37 (59%) Frame = -2 Query: 189 PSSFEGSERLDIWNRPTRAGAMVASPNPTTASALATK 79 P++ GS + P RAG SP+PTTASA AT+ Sbjct: 101 PAAPPGSPSVPSDPGPERAGTQEPSPDPTTASAAATQ 137
>Q9NQQ7:S35C2_HUMAN Solute carrier family 35 member C2 - Homo sapiens (Human)| Length = 365 Score = 31.6 bits (70), Expect = 9.4 Identities = 26/145 (17%), Positives = 56/145 (38%), Gaps = 5/145 (3%) Frame = +2 Query: 272 YCLSASLLSIINKWAIMKFPYPGALTALQYLTSVAGVLLCGQLKLIEPDRLNLRTMW--- 442 YC S + + NKW F +P +T L L L R + W Sbjct: 25 YCFSIGI-TFYNKWLTKSFHFPLFMTMLHLAVIFLFSALSRALVQCSSHRARVVLSWADY 83 Query: 443 --KFLPAAVMFYISIFTNSELLMHANVDTFIVFRSAVPIFVAIGETLYLHQPCPSFKTWL 616 + P A+ + + ++ ++ V + + +S+ +F+ I ++ + + L Sbjct: 84 LRRVAPTALATALDVGLSNWSFLYVTVSLYTMTKSSAVLFILIFSLIFKLEELRAALV-L 142 Query: 617 SLSTILGGSVIYVFTDNQFTLTAYS 691 + I GG ++ + QF + ++ Sbjct: 143 VVLLIAGGLFMFTYKSTQFNVEGFA 167
>Q2L8Z5:RPOC2_GOSHI DNA-directed RNA polymerase beta'' chain - Gossypium hirsutum| (Upland cotton) (Gossypium mexicanum) Length = 1393 Score = 31.6 bits (70), Expect = 9.4 Identities = 25/93 (26%), Positives = 40/93 (43%), Gaps = 3/93 (3%) Frame = +1 Query: 589 TMPIFQDMALTFHYTWWKCDICFHG*PVHPDCLQLGDS---LSGEHVY*FRVHQTCRHDH 759 T PI T T W C +C+ P H D ++LG++ ++G+ + T Sbjct: 280 TQPISIRTPFTCRSTSWICRLCYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQLTL---- 335 Query: 760 RVEHMGPCALQQP*GSAAVPT*APYNGRVQSDE 858 R H G G A AP+NG+++ +E Sbjct: 336 RTFHTGGVFT----GGTAEHVRAPFNGKIKFNE 364
>A0ZZ25:RPOC2_GOSBA DNA-directed RNA polymerase beta'' chain - Gossypium barbadense| (Sea-island cotton) (Egyptian cotton) Length = 1391 Score = 31.6 bits (70), Expect = 9.4 Identities = 25/93 (26%), Positives = 40/93 (43%), Gaps = 3/93 (3%) Frame = +1 Query: 589 TMPIFQDMALTFHYTWWKCDICFHG*PVHPDCLQLGDS---LSGEHVY*FRVHQTCRHDH 759 T PI T T W C +C+ P H D ++LG++ ++G+ + T Sbjct: 280 TQPISIRTPFTCRSTSWICRLCYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQLTL---- 335 Query: 760 RVEHMGPCALQQP*GSAAVPT*APYNGRVQSDE 858 R H G G A AP+NG+++ +E Sbjct: 336 RTFHTGGVFT----GGTAEHVRAPFNGKIKFNE 364 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 281,084,698 Number of extensions: 6314172 Number of successful extensions: 16049 Number of sequences better than 10.0: 27 Number of HSP's gapped: 16028 Number of HSP's successfully gapped: 27 Length of query: 514 Length of database: 100,686,439 Length adjustment: 118 Effective length of query: 396 Effective length of database: 68,319,629 Effective search space: 27054573084 Effective search space used: 27054573084 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
