ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf143f08 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | Os12g0569200:Os12g0569200 | 181 | 8e-46 | 2 | AK107485:Os12g0569100 | 119 | 2e-27 | 3 | AK120060:Os08g0137300 | 31 | 0.98 | 4 | AK120589:Os09g0509700 | 31 | 0.99 | 5 | AK061394:Os05g0326400 | 31 | 0.99 | 6 | AK070420:Os01g0959000 | 30 | 1.7 | 7 | AK102638:Os11g0258900 | 30 | 1.7 | 8 | AK100001:Os12g0562800 | 30 | 2.9 | 9 | Os03g0757700:Os03g0757700 | 29 | 4.9 | 10 | AK100343:Os12g0193200 | 29 | 4.9 | 11 | AK109594:Os01g0881800 | 29 | 4.9 | 12 | AK071522:Os07g0421000 | 28 | 6.4 | 13 | AK067025:Os11g0242400 | 28 | 6.4 | 14 | AK106893:Os08g0199100 | 28 | 6.4 | 15 | Os12g0500400:Os12g0500400 | 28 | 8.3 | 16 | Os02g0317800:Os02g0317800 | 28 | 8.3 | 17 | AK110529: | 28 | 8.3 | 18 | AK111048:Os03g0438900 | 28 | 8.3 | 19 | AK109826:Os11g0295000 | 28 | 8.3 | 20 | Os11g0429800:Os11g0429800 | 28 | 8.4 | 21 | AK105632:Os03g0130900 | 28 | 8.4 | 22 | AK102717:Os03g0130900 | 28 | 8.4 |
|---|
>Os12g0569200:Os12g0569200 | Length = 164 Score = 181 bits (458), Expect = 8e-46 Identities = 77/134 (57%), Positives = 94/134 (70%) Frame = +3 Query: 150 CKPSRNVTVQNLCGKDLSLGIEPLANSKLLYSPGHLLRQGTHVSFTVCSWTGRVKVQDAV 329 C R VT+QNL G+DL L PLANS L+ G++LR GTH FT C WTGRV A Sbjct: 31 CATPRKVTIQNLSGRDLPLSETPLANSGALFGAGYVLRHGTHAEFTTCLWTGRVAAPGAA 90 Query: 330 VTEFHLGYDGGAWYQVSTDQSRMPIRVSITPHGHPLKDHCPTAGCTSGGKCFEHSVPGGK 509 V EFH+G DGGAWYQV Q+ P++V++TPHG PL+ HCP AGC GG+CF +VPGG Sbjct: 91 VVEFHVGPDGGAWYQVDNRQAGSPVKVTVTPHGRPLQGHCPAAGCRGGGQCFADAVPGGN 150 Query: 510 CHGVDEIKIVFYKP 551 CH VDE+KI++Y P Sbjct: 151 CHAVDELKIIYYSP 164
>AK107485:Os12g0569100 | Length = 95 Score = 119 bits (299), Expect = 2e-27 Identities = 55/93 (59%), Positives = 58/93 (62%) Frame = -3 Query: 535 ILISSTPWHLPPGTECSKHLPPLVQPAVGQWSFRGWPCGVMETRMGMRDWSVLTWYHAPP 356 IL SST W LPPGT +KH PP PA GQW + G PCGV T G W + TWYHAPP Sbjct: 2 ILSSSTAWQLPPGTASAKHWPPPRHPAAGQWPWSGRPCGVTVTFTGDPAWRLSTWYHAPP 61 Query: 355 SYPRWNSVTTASCTFTRPVHEHTVNETWVPWRS 257 S P WNS T A TRPVH H VN VPWRS Sbjct: 62 SGPTWNSTTAAPGAATRPVHRHVVNSACVPWRS 94
>AK120060:Os08g0137300 | Length = 493 Score = 31.2 bits (69), Expect = 0.98 Identities = 24/93 (25%), Positives = 33/93 (35%), Gaps = 8/93 (8%) Frame = -3 Query: 505 PPGTECSKHLPPLVQPAVGQWSF--------RGWPCGVMETRMGMRDWSVLTWYHAPPSY 350 P S+ LPP ++ V RG P V R+ + +HA P Sbjct: 114 PAAAAASEPLPPNLRFCVSSTDASRFPYTHPRGLPSAVRVARIAKELLQLDDHHHATPPP 173 Query: 349 PRWNSVTTASCTFTRPVHEHTVNETWVPWRSRW 251 PRW + F P HT++ WR W Sbjct: 174 PRWLVLADDDTAFVLPNLLHTLSR--YDWREPW 204
>AK120589:Os09g0509700 | Length = 154 Score = 31.2 bits (69), Expect = 0.99 Identities = 12/22 (54%), Positives = 13/22 (59%) Frame = -1 Query: 144 GGPARRRTWQWLPAPRRGGEQP 79 GG RRR W W RRGG+ P Sbjct: 89 GGACRRRRWSWRMRRRRGGQVP 110
>AK061394:Os05g0326400 | Length = 218 Score = 31.2 bits (69), Expect = 0.99 Identities = 20/45 (44%), Positives = 22/45 (48%), Gaps = 3/45 (6%) Frame = -1 Query: 195 PCRTGSAPSRCGSAYSSGGPA--RRRTWQWLPAPRRGGEQ-PGAW 70 P RT S+PSR A SS GP+ RR W P R PG W Sbjct: 34 PSRTASSPSRSSWAPSSVGPSTGSRRGEPWCSRPARTPRSVPGRW 78
>AK070420:Os01g0959000 | Length = 432 Score = 30.4 bits (67), Expect = 1.7 Identities = 19/60 (31%), Positives = 23/60 (38%) Frame = +2 Query: 29 PNQRPTVETAHGVLQAPGCSPPRRGAGSHCHVRRRAGPPEL*AEPQRDGAEPVRQGPLPR 208 P+ P A G +PPRR GS R + PP P R +R P PR Sbjct: 260 PDSPPIRRRADASPVRRGDTPPRRRPGSPVRRRSPSPPPRRRRSPMRPSPRRLRGSPSPR 319
>AK102638:Os11g0258900 | Length = 134 Score = 30.4 bits (67), Expect = 1.7 Identities = 19/44 (43%), Positives = 21/44 (47%) Frame = -1 Query: 141 GPARRRTWQWLPAPRRGGEQPGAWRTP*AVSTVGRWLGRSGEVR 10 G +R WQW PA R E+ G WR A W GRSG R Sbjct: 57 GIEKRSRWQWRPARR---ERRGRWRWRQA------WRGRSGPWR 91
>AK100001:Os12g0562800 | Length = 99 Score = 29.6 bits (65), Expect = 2.9 Identities = 19/57 (33%), Positives = 25/57 (43%), Gaps = 2/57 (3%) Frame = -2 Query: 404 DGHARLVGAHLVPRPAVVPEVELRHHGVLHLHASSPRAHGERNVGALAEQ--VAGAV 240 D HAR H RP P + L H AS+PR E+ G + +AGA+ Sbjct: 30 DPHARAHHHHARKRPPPPPPIRLTEHTARQAVASTPRGGEEKGGGTRVARLSLAGAI 86
>Os03g0757700:Os03g0757700 | Length = 441 Score = 28.9 bits (63), Expect = 4.9 Identities = 17/43 (39%), Positives = 22/43 (51%) Frame = +2 Query: 11 LTSPLLPNQRPTVETAHGVLQAPGCSPPRRGAGSHCHVRRRAG 139 L+S LP+ PT+ + H PG +PP GS VR R G Sbjct: 273 LSSRSLPSPLPTLPSTHAT--TPGHAPPHPPPGSAEKVRGRGG 313
>AK100343:Os12g0193200 | Length = 665 Score = 28.9 bits (63), Expect = 4.9 Identities = 28/89 (31%), Positives = 38/89 (42%), Gaps = 1/89 (1%) Frame = +3 Query: 168 VTVQNLCGKDLSLGIEPLANSKLLYSPGHLLRQGTHVSFTVCSWTGRVKVQDAVVTEFHL 347 V Q G+D+ L I+ L N+ YSP RQGT C V ++V T Sbjct: 125 VNKQRKAGRDIGLVID-LTNTTRYYSPTEWTRQGTKYVKIACKGRDAVPDNESVNT---F 180 Query: 348 GYDGGAWYQVSTDQSRMPIRVSI-TPHGH 431 Y+ A+ QSR P + + HGH Sbjct: 181 VYEVMAFLD-RQKQSRNPKYILVHCTHGH 208
>AK109594:Os01g0881800 | Length = 368 Score = 28.9 bits (63), Expect = 4.9 Identities = 21/48 (43%), Positives = 25/48 (52%) Frame = -1 Query: 192 CRTGSAPSRCGSAYSSGGPARRRTWQWLPAPRRGGEQPGAWRTP*AVS 49 CR+ A R S Y + +RRR L RRGG QPG R P A+S Sbjct: 75 CRSSRA--RPSSPYPAACASRRRRCGLLHL-RRGGAQPGHRRRPQAIS 119
>AK071522:Os07g0421000 | Length = 378 Score = 28.5 bits (62), Expect = 6.4 Identities = 19/40 (47%), Positives = 23/40 (57%), Gaps = 1/40 (2%) Frame = -2 Query: 416 DGDPDGH-ARLVGAHLVPRPAVVPEVELRHHGVLHLHASS 300 DGDP AR A L P PA + ++ RH VL LHAS+ Sbjct: 71 DGDPAPRLARTTAAPLSPDPAFLRALDCRHGRVL-LHASN 109
>AK067025:Os11g0242400 | Length = 277 Score = 28.5 bits (62), Expect = 6.4 Identities = 19/60 (31%), Positives = 23/60 (38%) Frame = -2 Query: 398 HARLVGAHLVPRPAVVPEVELRHHGVLHLHASSPRAHGERNVGALAEQVAGAVEELAVGQ 219 H R V A P P LRHH +R VG A +V+GA A G+ Sbjct: 18 HRRRVAASASPPPRATATATLRHH--------------QRVVGCRAAEVSGAEPSAAAGE 63
>AK106893:Os08g0199100 | Length = 284 Score = 28.5 bits (62), Expect = 6.4 Identities = 22/59 (37%), Positives = 27/59 (45%) Frame = -1 Query: 195 PCRTGSAPSRCGSAYSSGGPARRRTWQWLPAPRRGGEQPGAWRTP*AVSTVGRWLGRSG 19 P T SAPSR S +S +RR W R G PG R A+++ R L SG Sbjct: 137 PPSTDSAPSRTRSCTTSCRSSRRGRWCAPACSRAAGATPGPPRR--ALTSALRALAASG 193
>Os12g0500400:Os12g0500400 | Length = 463 Score = 28.1 bits (61), Expect = 8.3 Identities = 11/32 (34%), Positives = 16/32 (50%) Frame = +2 Query: 29 PNQRPTVETAHGVLQAPGCSPPRRGAGSHCHV 124 P QRP + +L++ G PP+ G G V Sbjct: 317 PKQRPKIRDVVEILKSDGVQPPKEGLGDDWQV 348
>Os02g0317800:Os02g0317800 | Length = 155 Score = 28.1 bits (61), Expect = 8.3 Identities = 14/36 (38%), Positives = 16/36 (44%) Frame = +3 Query: 444 HCPTAGCTSGGKCFEHSVPGGKCHGVDEIKIVFYKP 551 HC G T G F +S P G H +K YKP Sbjct: 115 HCTKRGDTHSGVKFTYSKPSGNSH---TVKTFLYKP 147
>AK110529: | Length = 264 Score = 28.1 bits (61), Expect = 8.3 Identities = 18/62 (29%), Positives = 26/62 (41%) Frame = +2 Query: 17 SPLLPNQRPTVETAHGVLQAPGCSPPRRGAGSHCHVRRRAGPPEL*AEPQRDGAEPVRQG 196 +P + RP + T V++ P PP G +R GPP + P R G P Sbjct: 137 APGMMAPRPQM-TGAPVMRPPAGGPPAAGMPPQPGMRPPGGPPPMGMPPMRPGMPPPGGP 195 Query: 197 PL 202 P+ Sbjct: 196 PM 197
>AK111048:Os03g0438900 | Length = 146 Score = 28.1 bits (61), Expect = 8.3 Identities = 18/42 (42%), Positives = 18/42 (42%) Frame = +2 Query: 83 CSPPRRGAGSHCHVRRRAGPPEL*AEPQRDGAEPVRQGPLPR 208 C G GSH RRR EL P R A PV P PR Sbjct: 51 CHRQASGYGSHSARRRRPSTHELPPSPLR--AHPVPPSPAPR 90
>AK109826:Os11g0295000 | Length = 104 Score = 28.1 bits (61), Expect = 8.3 Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 4/44 (9%) Frame = -2 Query: 317 HLHASSPRAHGERNVGALAEQVAGA----VEELAVGQRLDAEGE 198 HL ++P G+R+V AEQ AG A G +AEG+ Sbjct: 26 HLQPAAPAGEGDRDVVVCAEQAAGVSTSPCSAAAAGGGREAEGK 69
>Os11g0429800:Os11g0429800 | Length = 58 Score = 28.1 bits (61), Expect = 8.4 Identities = 13/32 (40%), Positives = 15/32 (46%) Frame = -1 Query: 189 RTGSAPSRCGSAYSSGGPARRRTWQWLPAPRR 94 RT S+ R GP RR W+W A RR Sbjct: 10 RTPSSKKRGPGGGGLDGPRERRRWRWAAAQRR 41
>AK105632:Os03g0130900 | Length = 381 Score = 28.1 bits (61), Expect = 8.4 Identities = 11/19 (57%), Positives = 15/19 (78%) Frame = -1 Query: 180 SAPSRCGSAYSSGGPARRR 124 S+P+RCGS +G P+RRR Sbjct: 354 SSPARCGSPQYAGTPSRRR 372
>AK102717:Os03g0130900 | Length = 381 Score = 28.1 bits (61), Expect = 8.4 Identities = 11/19 (57%), Positives = 15/19 (78%) Frame = -1 Query: 180 SAPSRCGSAYSSGGPARRR 124 S+P+RCGS +G P+RRR Sbjct: 354 SSPARCGSPQYAGTPSRRR 372 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 21,950,934 Number of extensions: 506128 Number of successful extensions: 1932 Number of sequences better than 10.0: 22 Number of HSP's gapped: 1928 Number of HSP's successfully gapped: 22 Length of query: 291 Length of database: 15,399,855 Length adjustment: 100 Effective length of query: 191 Effective length of database: 11,395,755 Effective search space: 2176589205 Effective search space used: 2176589205 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
