ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf140e21 |
|---|---|
| Clone Library Name | barley_pub |
>LOC_Os12g31130:12012.t02818:unspliced-genomic retrotransposon protein, putative, LINE subclass| Length = 7091 Score = 70.7 bits (148), Expect(3) = 3e-20 Identities = 31/61 (50%), Positives = 39/61 (63%) Frame = +1 / +1 Query: 1642 DGTGGGILLAASQDFF*L*EIRHTPHTISATICMCANDYKWSISAVYGPQSETD*IIFIG 1821 DGT GGILLA ++F L I PH++SAT+ M WSI+ VYGPQ E D I+F+ Sbjct: 3295 DGTRGGILLACDDNYFCLSNIIIKPHSLSATVTMKEEGLVWSITVVYGPQLEEDKILFLN 3474 Query: 1822 E 1824 E Sbjct: 3475 E 3477 Score = 35.9 bits (72), Expect(3) = 3e-20 Identities = 12/20 (60%), Positives = 15/20 (75%) Frame = +2 / +3 Query: 1469 VMNWNVLGLNNPARRKGFHL 1528 ++NWNV GLNNPA+R L Sbjct: 3102 ILNWNVRGLNNPAKRDNIKL 3161 Score = 30.4 bits (60), Expect(3) = 3e-20 Identities = 10/24 (41%), Positives = 18/24 (75%) Frame = +1 / +3 Query: 1537 AFVSCLQETKLDFIDCRLVAEILG 1608 A + CLQETK++++ +V++ LG Sbjct: 3180 ATIVCLQETKIEYVSDSIVSQTLG 3251 Score = 35.0 bits (70), Expect = 1.7 Identities = 23/58 (39%), Positives = 29/58 (50%) Frame = -3 / -1 Query: 1814 KII*SVSD*GP*TAEMLHL*SLAHIQMVAEIVCGVCLISYNQKKSWEAARRIPPPVPS 1641 K I S S GP T + + I VA+ +CG+ +I QK A RIPP VPS Sbjct: 3467 KRILSSSSWGPYTTVIDQTKPSSFIVTVADKLCGLIIIFERQK*LSSQANRIPPLVPS 3294
>LOC_Os06g28780:12006.t02582:unspliced-genomic retrotransposon protein, putative, LINE subclass| Length = 2444 Score = 66.1 bits (138), Expect(3) = 1e-15 Identities = 28/60 (46%), Positives = 40/60 (66%) Frame = +1 / +3 Query: 1645 GTGGGILLAASQDFF*L*EIRHTPHTISATICMCANDYKWSISAVYGPQSETD*IIFIGE 1824 GT GGI+LA + +FF + EI+ ++++ATI M +WSI+ VYGPQ E D I F+ E Sbjct: 1461 GTRGGIILACNSNFFSMSEIKQGQYSLTATITMLEEALQWSITVVYGPQLEADKIAFLTE 1640 Score = 31.3 bits (62), Expect(3) = 1e-15 Identities = 13/27 (48%), Positives = 17/27 (62%) Frame = +1 / +3 Query: 1528 QNNAFVSCLQETKLDFIDCRLVAEILG 1608 Q A + CLQETKL + R ++ ILG Sbjct: 1341 QTGASIVCLQETKLAVVTDRSISSILG 1421 Score = 24.0 bits (46), Expect(3) = 1e-15 Identities = 8/15 (53%), Positives = 11/15 (73%) Frame = +2 / +3 Query: 1469 VMNWNVLGLNNPARR 1513 + NWNV GLN A++ Sbjct: 1272 LFNWNVRGLNAQAKQ 1316 Score = 34.5 bits (69), Expect = 2.4 Identities = 21/53 (39%), Positives = 29/53 (54%) Frame = +2 / +1 Query: 1652 EVGFFLLLPRISSDCRRSDTLRTLSQPPFVCVLMIINGAFRPSTDLSLKQIKL 1810 EV +L + R SS C++ + TL Q P C+ + +G R SLKQIKL Sbjct: 1468 EVESYLHVIRTSSLCQKLSKVNTL*QQPSPCLKRLSSGL*RWYMVPSLKQIKL 1626
>LOC_Os10g19890:12010.t01489:unspliced-genomic retrotransposon protein, putative, LINE subclass| Length = 3639 Score = 57.9 bits (120), Expect(3) = 4e-15 Identities = 26/61 (42%), Positives = 37/61 (60%) Frame = +1 / +1 Query: 1642 DGTGGGILLAASQDFF*L*EIRHTPHTISATICMCANDYKWSISAVYGPQSETD*IIFIG 1821 DG+ GGILLA ++F + +I +++SATI M WSI+ VYGPQ E + F+ Sbjct: 1423 DGSRGGILLACDDNYFSISDITLRQYSLSATITMKEEILAWSITVVYGPQLEEQKVQFLN 1602 Query: 1822 E 1824 E Sbjct: 1603 E 1605 Score = 33.6 bits (67), Expect(3) = 4e-15 Identities = 11/20 (55%), Positives = 14/20 (70%) Frame = +2 / +1 Query: 1469 VMNWNVLGLNNPARRKGFHL 1528 ++NWNV GLNNPA + L Sbjct: 1237 ILNWNVCGLNNPAEKDNVKL 1296 Score = 28.1 bits (55), Expect(3) = 4e-15 Identities = 12/27 (44%), Positives = 16/27 (59%) Frame = +1 / +1 Query: 1528 QNNAFVSCLQETKLDFIDCRLVAEILG 1608 Q A + CLQETKLD + ++ LG Sbjct: 1306 QMKASIVCLQETKLDDVSDSVMLRTLG 1386
>LOC_Os09g14150:12009.t01204:unspliced-genomic retrotransposon protein, putative, LINE subclass| Length = 2125 Score = 58.8 bits (122), Expect(3) = 4e-15 Identities = 27/60 (45%), Positives = 36/60 (60%) Frame = +1 / +2 Query: 1645 GTGGGILLAASQDFF*L*EIRHTPHTISATICMCANDYKWSISAVYGPQSETD*IIFIGE 1824 GT GGILLA F L ++ ++SATI M + WSI+ VYGPQSE ++F+ E Sbjct: 890 GTRGGILLACDNSHFTLSDVLIKDFSLSATITMKDENIAWSITVVYGPQSEEQKVLFLEE 1069 Score = 34.5 bits (69), Expect(3) = 4e-15 Identities = 12/20 (60%), Positives = 15/20 (75%) Frame = +2 / +2 Query: 1469 VMNWNVLGLNNPARRKGFHL 1528 V+NWNV GLNNP+R+ L Sbjct: 701 VLNWNVRGLNNPSRKANVKL 760 Score = 26.3 bits (51), Expect(3) = 4e-15 Identities = 11/24 (45%), Positives = 15/24 (62%) Frame = +1 / +2 Query: 1537 AFVSCLQETKLDFIDCRLVAEILG 1608 A + CLQETKL+ +V + LG Sbjct: 779 ATIVCLQETKLEVFSDPVVLQTLG 850
>LOC_Os05g18000:12005.t01569:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 6512 Score = 64.8 bits (135), Expect(3) = 7e-15 Identities = 28/61 (45%), Positives = 39/61 (63%) Frame = +1 / +3 Query: 1642 DGTGGGILLAASQDFF*L*EIRHTPHTISATICMCANDYKWSISAVYGPQSETD*IIFIG 1821 DGT GGILLA ++FF + E+ +++SAT+ M WSI+ VYGPQ + D I F+ Sbjct: 2256 DGTRGGILLACDENFFSISEVVLGQYSLSATVSMREEGLNWSITVVYGPQLDADKINFLA 2435 Query: 1822 E 1824 E Sbjct: 2436 E 2438 Score = 27.6 bits (54), Expect(3) = 7e-15 Identities = 10/22 (45%), Positives = 13/22 (59%) Frame = +2 / +3 Query: 1433 CPMFPVLLPHGSVMNWNVLGLN 1498 CP P+ + + NWNV GLN Sbjct: 2034 CPFGPMSQDNVYLFNWNVRGLN 2099 Score = 26.3 bits (51), Expect(3) = 7e-15 Identities = 10/22 (45%), Positives = 14/22 (63%) Frame = +1 / +3 Query: 1543 VSCLQETKLDFIDCRLVAEILG 1608 + CLQETKL I +++ LG Sbjct: 2154 IVCLQETKLSAISNQIILNTLG 2219
>LOC_Os08g12120:12008.t01092:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 4802 Score = 42.3 bits (86), Expect(4) = 1e-14 Identities = 17/35 (48%), Positives = 22/35 (62%) Frame = +1 / +1 Query: 1720 TISATICMCANDYKWSISAVYGPQSETD*IIFIGE 1824 T SA+I M WSIS VYGPQ + + I+F+ E Sbjct: 574 TASASITMKDEGVSWSISVVYGPQQDAEKIVFLSE 678 Score = 35.0 bits (70), Expect(4) = 1e-14 Identities = 12/25 (48%), Positives = 17/25 (68%) Frame = +2 / +3 Query: 1469 VMNWNVLGLNNPARRKGFHLRTMRL 1543 ++NWNV GLNN ARR+ L ++ Sbjct: 312 ILNWNVRGLNNQARRENVRLLVQQM 386 Score = 29.0 bits (57), Expect(4) = 1e-14 Identities = 15/28 (53%), Positives = 16/28 (57%) Frame = +1 / +3 Query: 1528 QNNAFVSCLQETKLDFIDCRLVAEILGP 1611 Q NA + CLQETKL I V LGP Sbjct: 381 QMNATIVCLQETKLSQISENDVLCTLGP 464 Score = 28.1 bits (55), Expect(4) = 1e-14 Identities = 14/29 (48%), Positives = 18/29 (62%) Frame = +1 / +3 Query: 1642 DGTGGGILLAASQDFF*L*EIRHTPHTIS 1728 DGT GGILLA + FF L I +++S Sbjct: 498 DGTRGGILLACNGSFFSLSSIVVRQYSLS 584
>LOC_Os03g39900:12003.t03422:unspliced-genomic retrotransposon protein, putative, LINE subclass| Length = 4778 Score = 59.7 bits (124), Expect(3) = 2e-14 Identities = 24/60 (40%), Positives = 42/60 (70%) Frame = +1 / +1 Query: 1645 GTGGGILLAASQDFF*L*EIRHTPHTISATICMCANDYKWSISAVYGPQSETD*IIFIGE 1824 GT GGILLA + +FF + + H+++A++ M +++ WS++ VYGPQ+ET+ +F+ E Sbjct: 1459 GTRGGILLACNHNFFSISYVILKDHSLTASVTMKSDNTCWSLTVVYGPQAETEKNLFLDE 1638 Score = 29.9 bits (59), Expect(3) = 2e-14 Identities = 11/27 (40%), Positives = 17/27 (62%) Frame = +1 / +1 Query: 1528 QNNAFVSCLQETKLDFIDCRLVAEILG 1608 Q A V CLQETK++ + ++ + LG Sbjct: 1339 QMKATVVCLQETKMEMVSDSVITQFLG 1419 Score = 27.6 bits (54), Expect(3) = 2e-14 Identities = 9/20 (45%), Positives = 14/20 (70%) Frame = +2 / +1 Query: 1469 VMNWNVLGLNNPARRKGFHL 1528 ++NWNV GLN+ A++ L Sbjct: 1270 ILNWNVRGLNSQAKQDNVKL 1329
>LOC_Os04g13000:12004.t01121:unspliced-genomic retrotransposon protein, putative, LINE subclass| Length = 4204 Score = 64.8 bits (135), Expect(3) = 3e-14 Identities = 26/61 (42%), Positives = 41/61 (67%) Frame = +1 / +2 Query: 1642 DGTGGGILLAASQDFF*L*EIRHTPHTISATICMCANDYKWSISAVYGPQSETD*IIFIG 1821 DGT GG+LLA +++FF ++ +++SAT+ M +WSI+ VYGPQ E D ++F+ Sbjct: 3095 DGTKGGLLLACNENFFSPSDVILGQYSLSATVTMREEGLQWSITVVYGPQLEADKVVFLS 3274 Query: 1822 E 1824 E Sbjct: 3275 E 3277 Score = 26.3 bits (51), Expect(3) = 3e-14 Identities = 11/24 (45%), Positives = 16/24 (66%) Frame = +1 / +2 Query: 1537 AFVSCLQETKLDFIDCRLVAEILG 1608 A + CLQETK+ ++ R+V LG Sbjct: 2987 ATIVCLQETKIASLNDRVVLSSLG 3058 Score = 25.4 bits (49), Expect(3) = 3e-14 Identities = 8/15 (53%), Positives = 12/15 (80%) Frame = +2 / +2 Query: 1469 VMNWNVLGLNNPARR 1513 + NWNV GLN+ A++ Sbjct: 2909 LFNWNVRGLNSKAKQ 2953
>LOC_Os09g15380:12009.t01326:unspliced-genomic retrotransposon protein, putative, LINE subclass| Length = 5768 Score = 53.8 bits (111), Expect(3) = 6e-14 Identities = 26/63 (41%), Positives = 39/63 (61%) Frame = +1 / +1 Query: 1645 GTGGGILLAASQDFF*L*EIRHTPHTISATICMCANDYKWSISAVYGPQSETD*IIFIGE 1824 GT GGILLA S + L +++ +T+SATI + WSI++VYGPQ + + F+ E Sbjct: 2638 GTRGGILLAVSDSKYKLNDVQLGTYTLSATITENEDGSSWSITSVYGPQLDNEKREFLEE 2817 Query: 1825 KKK 1833 K+ Sbjct: 2818 LKQ 2826 Score = 36.3 bits (73), Expect(3) = 6e-14 Identities = 15/21 (71%), Positives = 16/21 (76%) Frame = +1 / +1 Query: 1549 CLQETKLDFIDCRLVAEILGP 1611 CL ETKLDF+D LV ILGP Sbjct: 2539 CLPETKLDFLDQGLVDRILGP 2601 Score = 25.4 bits (49), Expect(3) = 6e-14 Identities = 9/17 (52%), Positives = 14/17 (82%) Frame = +2 / +1 Query: 1466 SVMNWNVLGLNNPARRK 1516 S++ WNV GLN+ AR++ Sbjct: 2446 SIVIWNVRGLNSLARQQ 2496 Score = 34.1 bits (68), Expect = 3.3 Identities = 22/53 (41%), Positives = 27/53 (50%) Frame = -3 / -1 Query: 1802 SVSD*GP*TAEMLHL*SLAHIQMVAEIVCGVCLISYNQKKSWEAARRIPPPVP 1644 S+S GP*T +L L + MVA+ V S+N E A RIPP VP Sbjct: 2795 SLSSWGP*TLVILQLEPSSFSVMVADSVYVPSCTSFNLYFESETASRIPPLVP 2637
>LOC_Os08g07900:12008.t00678:unspliced-genomic retrotransposon protein, putative, LINE subclass| Length = 5665 Score = 48.3 bits (99), Expect(3) = 6e-14 Identities = 23/63 (36%), Positives = 37/63 (58%) Frame = +1 / +3 Query: 1645 GTGGGILLAASQDFF*L*EIRHTPHTISATICMCANDYKWSISAVYGPQSETD*IIFIGE 1824 GT GG+LLAA+ + + L + +T+SAT+ + WS++ VYGPQ + F+ E Sbjct: 2358 GTRGGVLLAANDNKYELKDAHTGTYTVSATLTEKEDRATWSLTGVYGPQQDDAKREFLEE 2537 Query: 1825 KKK 1833 K+ Sbjct: 2538 LKQ 2546 Score = 36.8 bits (74), Expect(3) = 6e-14 Identities = 16/26 (61%), Positives = 17/26 (65%) Frame = +1 / +3 Query: 1534 NAFVSCLQETKLDFIDCRLVAEILGP 1611 N V CLQETKLDFID +LGP Sbjct: 2244 NCTVVCLQETKLDFIDQANFNRLLGP 2321 Score = 30.4 bits (60), Expect(3) = 6e-14 Identities = 8/17 (47%), Positives = 16/17 (94%) Frame = +2 / +3 Query: 1466 SVMNWNVLGLNNPARRK 1516 ++++WN+ GLN+PAR++ Sbjct: 2166 AILSWNIRGLNSPARQQ 2216
>LOC_Os04g27420:12004.t02445:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 6355 Score = 51.9 bits (107), Expect(3) = 3e-13 Identities = 22/61 (36%), Positives = 36/61 (59%) Frame = +1 / +3 Query: 1642 DGTGGGILLAASQDFF*L*EIRHTPHTISATICMCANDYKWSISAVYGPQSETD*IIFIG 1821 DGT GGI+LAA +++ L + +++ I M + W+I+ VYGPQ + + I F+ Sbjct: 3285 DGTRGGIILAADDNYYRLSQCELKSFSLTTKIVMRETNDAWTITVVYGPQQDAEKIAFLQ 3464 Query: 1822 E 1824 E Sbjct: 3465 E 3467 Score = 32.2 bits (64), Expect(3) = 3e-13 Identities = 13/28 (46%), Positives = 17/28 (60%) Frame = +1 / +3 Query: 1528 QNNAFVSCLQETKLDFIDCRLVAEILGP 1611 Q+ V CLQETKL + + +ILGP Sbjct: 3168 QHKPTVVCLQETKLQDVSKNCIVQILGP 3251 Score = 29.0 bits (57), Expect(3) = 3e-13 Identities = 10/23 (43%), Positives = 15/23 (65%) Frame = +2 / +3 Query: 1460 HGSVMNWNVLGLNNPARRKGFHL 1528 H ++ WNV GLN PA+++ L Sbjct: 3090 HCKIVCWNVRGLNAPAKKEAVKL 3158
>LOC_Os12g24790:12012.t02202:unspliced-genomic retrotransposon protein, putative, LINE subclass, expressed| Length = 4108 Score = 55.1 bits (114), Expect(3) = 4e-13 Identities = 23/60 (38%), Positives = 37/60 (61%) Frame = +1 / +2 Query: 1645 GTGGGILLAASQDFF*L*EIRHTPHTISATICMCANDYKWSISAVYGPQSETD*IIFIGE 1824 GT GG+LLA +++F + ++ +++SA + M +WSI+ VY PQ E D I F+ E Sbjct: 3296 GTRGGVLLACDENYFSISDVLLGTYSVSAVLTMRGEGLQWSITVVYRPQLEPDKINFLSE 3475 Score = 32.2 bits (64), Expect(3) = 4e-13 Identities = 14/31 (45%), Positives = 18/31 (58%) Frame = +1 / +2 Query: 1528 QNNAFVSCLQETKLDFIDCRLVAEILGPLLL 1620 Q+ A + CLQETKL I R++ LG L Sbjct: 3176 QHGATIVCLQETKLSSISDRIILNTLGQRFL 3268 Score = 25.4 bits (49), Expect(3) = 4e-13 Identities = 8/15 (53%), Positives = 12/15 (80%) Frame = +2 / +2 Query: 1469 VMNWNVLGLNNPARR 1513 + NWNV GLN+ A++ Sbjct: 3107 LFNWNVRGLNSKAKQ 3151
>LOC_Os08g31680:12008.t02913:unspliced-genomic retrotransposon protein, putative, LINE subclass| Length = 5606 Score = 42.3 bits (86), Expect(4) = 2e-12 Identities = 22/63 (34%), Positives = 34/63 (53%) Frame = +1 / +1 Query: 1645 GTGGGILLAASQDFF*L*EIRHTPHTISATICMCANDYKWSISAVYGPQSETD*IIFIGE 1824 GT GGILLA S + + ++ ++I A + + WSI+ VYGPQ + F+ E Sbjct: 2305 GTRGGILLAVSDSKYSIESVQTGVYSIMANLKEKEDGSAWSITGVYGPQPYNEKRDFLEE 2484 Query: 1825 KKK 1833 K+ Sbjct: 2485 LKQ 2493 Score = 35.9 bits (72), Expect(4) = 2e-12 Identities = 14/26 (53%), Positives = 17/26 (65%) Frame = +1 / +1 Query: 1534 NAFVSCLQETKLDFIDCRLVAEILGP 1611 N CLQETKL+F D +V +LGP Sbjct: 2191 NCSCVCLQETKLEFFDQAIVNRVLGP 2268 Score = 24.9 bits (48), Expect(4) = 2e-12 Identities = 7/17 (41%), Positives = 14/17 (82%) Frame = +2 / +1 Query: 1466 SVMNWNVLGLNNPARRK 1516 ++++WNV GLN+ A ++ Sbjct: 2113 AILSWNVRGLNSTAHQQ 2163 Score = 23.5 bits (45), Expect(4) = 2e-12 Identities = 10/17 (58%), Positives = 10/17 (58%) Frame = +3 / +1 Query: 1605 GASFADNFGFLPGRHRR 1655 G SFADNF F P R Sbjct: 2263 GPSFADNFCFPPATGTR 2313
>LOC_Os07g45530:12007.t04190:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 6747 Score = 57.4 bits (119), Expect(2) = 2e-12 Identities = 28/98 (28%), Positives = 55/98 (56%) Frame = +1 / +1 Query: 1531 NNAFVSCLQETKLDFIDCRLVAEILGPLLLIILASFRDGTGGGILLAASQDFF*L*EIRH 1710 ++A V CLQE+KL+ +D ++ E+ GP +A T GG+++A F ++ Sbjct: 3301 SHASVVCLQESKLEVVDLLVIHELCGPDFDDFVALPASHTRGGVIVAWKGSVFRGSQVHL 3480 Query: 1711 TPHTISATICMCANDYKWSISAVYGPQSETD*IIFIGE 1824 +++A + A ++ +++VYGPQ + + I+F+ E Sbjct: 3481 GQWSVTAKLEWIAGNHSCFLTSVYGPQDDNEKILFLEE 3594 Score = 35.9 bits (72), Expect(2) = 2e-12 Identities = 14/26 (53%), Positives = 19/26 (73%) Frame = +2 / +1 Query: 1439 MFPVLLPHGSVMNWNVLGLNNPARRK 1516 +F V + SV+ WNV GLNNPA+R+ Sbjct: 3199 LFLVSMSRLSVLVWNVRGLNNPAKRR 3276
>LOC_Os06g39820:12006.t03679:unspliced-genomic retrotransposon protein, putative, LINE subclass| Length = 4742 Score = 56.5 bits (117), Expect(3) = 3e-12 Identities = 25/61 (40%), Positives = 37/61 (60%) Frame = +1 / +2 Query: 1642 DGTGGGILLAASQDFF*L*EIRHTPHTISATICMCANDYKWSISAVYGPQSETD*IIFIG 1821 +GT GG++LA +FF + ++ ++SATI M +WSI VYG Q ET+ I F+ Sbjct: 2276 EGTRGGVILACDDNFFSISDVHLGRFSVSATITMREEAQQWSIIVVYGLQLETEKIAFLA 2455 Query: 1822 E 1824 E Sbjct: 2456 E 2458 Score = 29.5 bits (58), Expect(3) = 3e-12 Identities = 11/27 (40%), Positives = 18/27 (66%) Frame = +1 / +2 Query: 1528 QNNAFVSCLQETKLDFIDCRLVAEILG 1608 Q++A + CLQETKL + +++ LG Sbjct: 2159 QHSATIVCLQETKLAVVSDQIILNTLG 2239 Score = 23.5 bits (45), Expect(3) = 3e-12 Identities = 8/15 (53%), Positives = 11/15 (73%) Frame = +2 / +2 Query: 1469 VMNWNVLGLNNPARR 1513 + NWNV GLN A++ Sbjct: 2090 LFNWNVRGLNVKAKQ 2134
>LOC_Os12g15340:12012.t01391:unspliced-genomic retrotransposon protein, putative, LINE subclass| Length = 7350 Score = 57.4 bits (119), Expect(3) = 6e-12 Identities = 27/60 (45%), Positives = 35/60 (58%) Frame = +1 / +1 Query: 1645 GTGGGILLAASQDFF*L*EIRHTPHTISATICMCANDYKWSISAVYGPQSETD*IIFIGE 1824 GT GGI+LA + + F L E ++SATI M +WSI+ VY PQ E D I F+ E Sbjct: 3286 GTRGGIILACNANLFSLSEAVQGQFSLSATITMFEEGLQWSITVVYSPQLEADKIAFLAE 3465 Score = 27.2 bits (53), Expect(3) = 6e-12 Identities = 12/24 (50%), Positives = 15/24 (62%) Frame = +1 / +1 Query: 1537 AFVSCLQETKLDFIDCRLVAEILG 1608 A + CLQETKL + R + ILG Sbjct: 3175 ASIVCLQETKLATVTDRNILSILG 3246 Score = 24.0 bits (46), Expect(3) = 6e-12 Identities = 8/15 (53%), Positives = 11/15 (73%) Frame = +2 / +1 Query: 1469 VMNWNVLGLNNPARR 1513 + NWNV GLN A++ Sbjct: 3097 LFNWNVRGLNAQAKQ 3141
>LOC_Os06g37400:12006.t03435:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 10240 Score = 60.2 bits (125), Expect(2) = 2e-11 Identities = 25/61 (40%), Positives = 38/61 (62%) Frame = +1 / +2 Query: 1642 DGTGGGILLAASQDFF*L*EIRHTPHTISATICMCANDYKWSISAVYGPQSETD*IIFIG 1821 +GT GG++LA +FF + ++ ++SATI M +WSI+ VYGPQ E + I F+ Sbjct: 3197 EGTRGGVILACDDNFFSICDVHLGRFSVSATITMREEAQQWSITVVYGPQLEAEKIAFLA 3376 Query: 1822 E 1824 E Sbjct: 3377 E 3379 Score = 29.5 bits (58), Expect(2) = 2e-11 Identities = 11/27 (40%), Positives = 18/27 (66%) Frame = +1 / +2 Query: 1528 QNNAFVSCLQETKLDFIDCRLVAEILG 1608 Q++A + CLQETKL + +++ LG Sbjct: 3080 QHSATIVCLQETKLAVVSDQIILNTLG 3160
>LOC_Os12g41440:12012.t03820:unspliced-genomic retrotransposon protein, putative, LINE subclass| Length = 4119 Score = 39.1 bits (79), Expect(3) = 1e-09 Identities = 16/49 (32%), Positives = 29/49 (59%) Frame = +1 / +1 Query: 1642 DGTGGGILLAASQDFF*L*EIRHTPHTISATICMCANDYKWSISAVYGP 1788 +G+ GGI+LAA +++F L +++A + M + W+I+ YGP Sbjct: 3970 EGSRGGIILAADENYFTLSHCDLRMFSLTAKVTMRETNAYWTITGAYGP 4116 Score = 31.3 bits (62), Expect(3) = 1e-09 Identities = 10/19 (52%), Positives = 15/19 (78%) Frame = +2 / +1 Query: 1460 HGSVMNWNVLGLNNPARRK 1516 H +++WNV GLN PA+R+ Sbjct: 3775 HCKIVSWNVRGLNAPAKRE 3831 Score = 29.9 bits (59), Expect(3) = 1e-09 Identities = 13/27 (48%), Positives = 16/27 (59%) Frame = +1 / +1 Query: 1528 QNNAFVSCLQETKLDFIDCRLVAEILG 1608 Q NA + CLQETKL +D + E G Sbjct: 3853 QQNATLVCLQETKLQDVDKACIIETNG 3933
>LOC_Os12g43900:12012.t04057:unspliced-genomic retrotransposon protein, putative, LINE subclass| Length = 4042 Score = 37.3 bits (75), Expect(3) = 3e-09 Identities = 17/52 (32%), Positives = 29/52 (55%) Frame = +1 / +2 Query: 1645 GTGGGILLAASQDFF*L*EIRHTPHTISATICMCANDYKWSISAVYGPQSET 1800 GT GGIL+ + DF L + ++SAT+ + A + ++ VYGP ++ Sbjct: 3449 GTRGGILILWNDDFVDLKDFAQRTFSLSATVFLKACQTSFLLTVVYGPTRDS 3604 Score = 33.6 bits (67), Expect(3) = 3e-09 Identities = 12/25 (48%), Positives = 17/25 (68%) Frame = +2 / +2 Query: 1439 MFPVLLPHGSVMNWNVLGLNNPARR 1513 +F + P +++WNV GLN PARR Sbjct: 3224 LFLMTYPVIDILSWNVCGLNRPARR 3298 Score = 28.1 bits (55), Expect(3) = 3e-09 Identities = 10/22 (45%), Positives = 15/22 (68%) Frame = +1 / +2 Query: 1543 VSCLQETKLDFIDCRLVAEILG 1608 + CLQETK+ ID R+ + + G Sbjct: 3338 IVCLQETKMSNIDARMASSLGG 3403
>LOC_Os09g07610:12009.t00557:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 8286 Score = 62.5 bits (130), Expect = 9e-09 Identities = 28/59 (47%), Positives = 39/59 (66%) Frame = +1 / +1 Query: 1648 TGGGILLAASQDFF*L*EIRHTPHTISATICMCANDYKWSISAVYGPQSETD*IIFIGE 1824 T GG+LLA ++FF L +I +++SATI M + +WSI+ VYGPQ E D I F+ E Sbjct: 3538 TRGGVLLACDENFFSLSDISLGQYSVSATITMREENLQWSITVVYGPQLEGDKIDFLAE 3714 Score = 40.5 bits (82), Expect = 0.039 Identities = 18/63 (28%), Positives = 33/63 (52%) Frame = -2 / -1 Query: 1830 FFFTNENNLICFRLRSVDGRNAPFIIISTHTNGG*DSVRSVSDLLQSEEILGSSKKNPTS 1651 F F+ + N + +L ++ N P ++ TH +G *D + + D+ + EEI + + T Sbjct: 3720 FNFSKKINFVSLKLWTIHNSNGPLQVLFTHGDGR*DRILAERDVREREEIFITG*QYSTP 3541 Query: 1650 CAV 1642 C V Sbjct: 3540 CRV 3532
>LOC_Os09g06730:12009.t00469:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 4191 Score = 40.9 bits (83), Expect(3) = 4e-08 Identities = 21/61 (34%), Positives = 35/61 (57%) Frame = +1 / +2 Query: 1651 GGGILLAASQDFF*L*EIRHTPHTISATICMCANDYKWSISAVYGPQSETD*IIFIGEKK 1830 GGGI+ AAS + + ++ + HT+SAT+ + WSI+ VY P + + F+ E K Sbjct: 944 GGGIIRAASDRKYLISMVQVSTHTVSATLTELEDGSVWSITGVYVP*LDNEK*EFMEELK 1123 Query: 1831 K 1833 + Sbjct: 1124 Q 1126 Score = 31.8 bits (63), Expect(3) = 4e-08 Identities = 12/21 (57%), Positives = 15/21 (71%) Frame = +1 / +1 Query: 1549 CLQETKLDFIDCRLVAEILGP 1611 CLQET+L+F D V +LGP Sbjct: 838 CLQETELEFFDQDTVNRVLGP 900 Score = 22.6 bits (43), Expect(3) = 4e-08 Identities = 7/14 (50%), Positives = 12/14 (85%) Frame = +2 / +2 Query: 1466 SVMNWNVLGLNNPA 1507 ++++WNV GLN+ A Sbjct: 746 ALLSWNVRGLNSNA 787
>LOC_Os04g07580:12004.t00632:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 6300 Score = 58.3 bits (121), Expect = 2e-07 Identities = 24/57 (42%), Positives = 37/57 (64%) Frame = +1 / +1 Query: 1654 GGILLAASQDFF*L*EIRHTPHTISATICMCANDYKWSISAVYGPQSETD*IIFIGE 1824 GG+LLA +++FF + ++ ++SAT+ M +WSI+ VYGPQ E D I F+ E Sbjct: 4738 GGVLLACNENFFCISDVVLGQFSVSATVTMREEGLQWSITVVYGPQLEADKIAFLSE 4908
>LOC_Os04g44370:12004.t03977:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 5835 Score = 45.5 bits (93), Expect(2) = 9e-07 Identities = 29/82 (35%), Positives = 42/82 (51%) Frame = +1 / +2 Query: 1543 VSCLQETKLDFIDCRLVAEILGPLLLIILASFRDGTGGGILLAASQDFF*L*EIRHTPHT 1722 ++CLQETKL ID L + G L I GT GGIL+ + L +IR + + Sbjct: 2369 LACLQETKLQNIDDGLARFLGGYKLDIFAFKPATGTRGGILILWNSATLVLQDIRISRFS 2548 Query: 1723 ISATICMCANDYKWSISAVYGP 1788 ISA + + + ++ VYGP Sbjct: 2549 ISAQVTVPLTGATFLMTGVYGP 2614 Score = 28.6 bits (56), Expect(2) = 9e-07 Identities = 10/18 (55%), Positives = 13/18 (72%) Frame = +2 / +2 Query: 1472 MNWNVLGLNNPARRKGFH 1525 ++WNV GLN+PAR H Sbjct: 2288 ISWNVRGLNSPARCNTVH 2341
>LOC_Os04g49300:12004.t04446:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 4555 Score = 38.2 bits (77), Expect(3) = 3e-06 Identities = 19/63 (30%), Positives = 36/63 (57%) Frame = +1 / +2 Query: 1645 GTGGGILLAASQDFF*L*EIRHTPHTISATICMCANDYKWSISAVYGPQSETD*IIFIGE 1824 GT GGILL + + + E+R ++++A + + ++ISAVYGP + IF+ + Sbjct: 2141 GTRGGILLLWNSNSINITEVRLRRYSMTAKVSLLHTADSFTISAVYGPTRHREKEIFLRQ 2320 Query: 1825 KKK 1833 ++ Sbjct: 2321 IRR 2329 Score = 27.6 bits (54), Expect(3) = 3e-06 Identities = 9/19 (47%), Positives = 14/19 (73%) Frame = +2 / +2 Query: 1469 VMNWNVLGLNNPARRKGFH 1525 +++WNV GLN+PA+ H Sbjct: 1955 LLSWNVRGLNSPAKCTVLH 2011 Score = 22.6 bits (43), Expect(3) = 3e-06 Identities = 8/13 (61%), Positives = 10/13 (76%) Frame = +1 / +2 Query: 1543 VSCLQETKLDFID 1581 ++C QETKL ID Sbjct: 2039 IACFQETKLRAID 2077 Score = 25.8 bits (50), Expect(2) = 4.2 Identities = 10/11 (90%), Positives = 10/11 (90%) Frame = -2 / -2 Query: 1509 LAGLFRPRTFQ 1477 LAG FRPRTFQ Sbjct: 1995 LAGEFRPRTFQ 1963 Score = 24.9 bits (48), Expect(2) = 4.2 Identities = 16/41 (39%), Positives = 19/41 (46%) Frame = -3 / -2 Query: 1670 ARRIPPPVPSRKEAKIISKRGPKISATSLQSIKSSLVSWRQ 1548 +RRIPP VP +S P SI SLVS +Q Sbjct: 2166 SRRIPPRVPLAGLMA*LSNLYPPRYLAKTSSIALSLVS*KQ 2044
>LOC_Os01g41960:12001.t03716:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 9013 Score = 39.6 bits (80), Expect(3) = 6e-06 Identities = 14/25 (56%), Positives = 19/25 (76%) Frame = +2 / +2 Query: 1442 FPVLLPHGSVMNWNVLGLNNPARRK 1516 F +L H +++WNV GLNNPARR+ Sbjct: 5834 FAQMLQHLRILSWNVRGLNNPARRE 5908 Score = 25.8 bits (50), Expect(3) = 6e-06 Identities = 13/24 (54%), Positives = 15/24 (62%) Frame = +1 / +2 Query: 1537 AFVSCLQETKLDFIDCRLVAEILG 1608 A + CLQETKL ID + EI G Sbjct: 5939 AGILCLQETKLSSIDQWIGKEIGG 6010 Score = 22.1 bits (42), Expect(3) = 6e-06 Identities = 10/42 (23%), Positives = 19/42 (45%) Frame = +3 / +2 Query: 1605 GASFADNFGFLPGRHRRWDSSCCFPGFLLIVGDQTHSAHYLS 1730 G + NF FLP R + + ++ + + + H+LS Sbjct: 6005 GGNRLSNFNFLPANGTRGGIAIFWDDTIVNMANFSQGTHHLS 6130
>LOC_Os04g50192:12004.t04537:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 4053 Score = 32.7 bits (65), Expect(3) = 6e-06 Identities = 18/63 (28%), Positives = 33/63 (52%) Frame = +1 / +1 Query: 1645 GTGGGILLAASQDFF*L*EIRHTPHTISATICMCANDYKWSISAVYGPQSETD*IIFIGE 1824 GT GILL + + + E+R ++ A + + N + I+AVYGP + + F+ + Sbjct: 1336 GTRVGILLMWNSNLVDINEVRLRRFSMIARVNLLHNSETFFITAVYGPTTHREKYAFLRQ 1515 Query: 1825 KKK 1833 K+ Sbjct: 1516 IKR 1524 Score = 30.4 bits (60), Expect(3) = 6e-06 Identities = 10/30 (33%), Positives = 19/30 (63%) Frame = +2 / +1 Query: 1436 PMFPVLLPHGSVMNWNVLGLNNPARRKGFH 1525 P +++ + +++WNV GLN+PA+ H Sbjct: 1117 PSSHMVVQNFELLSWNVCGLNSPAKCSAVH 1206 Score = 24.4 bits (47), Expect(3) = 6e-06 Identities = 10/27 (37%), Positives = 15/27 (55%) Frame = +1 / +1 Query: 1528 QNNAFVSCLQETKLDFIDCRLVAEILG 1608 + N ++C QETKL +D L + G Sbjct: 1219 ETNCTIACFQETKLRAMDDGLARFLSG 1299
>LOC_Os09g03860:12009.t00282:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 5662 Score = 32.2 bits (64), Expect(3) = 8e-06 Identities = 11/35 (31%), Positives = 21/35 (60%) Frame = +1 / -1 Query: 1720 TISATICMCANDYKWSISAVYGPQSETD*IIFIGE 1824 +++A + M + W I+ VYGPQ + ++F+ E Sbjct: 5422 SLTAMVTMREANVSWKITVVYGPQEDAAKLLFLQE 5318 Score = 29.9 bits (59), Expect(3) = 8e-06 Identities = 11/16 (68%), Positives = 14/16 (87%) Frame = +1 / -1 Query: 1642 DGTGGGILLAASQDFF 1689 DGT GGI+LAA++ FF Sbjct: 5500 DGTRGGIILAANEKFF 5453 Score = 24.9 bits (48), Expect(3) = 8e-06 Identities = 11/27 (40%), Positives = 15/27 (55%) Frame = +1 / -1 Query: 1528 QNNAFVSCLQETKLDFIDCRLVAEILG 1608 Q A + CLQETKL +D + + G Sbjct: 5617 QYKATLVCLQETKLQEVDKACIIQTPG 5537
>LOC_Os03g16310:12003.t01416:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 2613 Score = 33.6 bits (67), Expect(3) = 1e-05 Identities = 19/48 (39%), Positives = 26/48 (54%) Frame = +1 / +1 Query: 1645 GTGGGILLAASQDFF*L*EIRHTPHTISATICMCANDYKWSISAVYGP 1788 GT GGILL S F + E+R +ISA I + + ++ VYGP Sbjct: 205 GTRGGILLLWSSGDFDVQEVRIGRFSISAQITDIRSGVTFLLTGVYGP 348 Score = 29.9 bits (59), Expect(3) = 1e-05 Identities = 10/19 (52%), Positives = 14/19 (73%) Frame = +2 / +1 Query: 1469 VMNWNVLGLNNPARRKGFH 1525 +++WNV GLN+PAR H Sbjct: 19 LISWNVRGLNSPARCNAVH 75 Score = 22.6 bits (43), Expect(3) = 1e-05 Identities = 8/13 (61%), Positives = 10/13 (76%) Frame = +1 / +1 Query: 1543 VSCLQETKLDFID 1581 ++C QETKL ID Sbjct: 103 LACFQETKLQSID 141
>LOC_Os01g50220:12001.t04458:unspliced-genomic retrotransposon protein, putative, LINE subclass| Length = 5173 Score = 32.2 bits (64), Expect(3) = 2e-05 Identities = 19/48 (39%), Positives = 25/48 (52%) Frame = +1 / +1 Query: 1645 GTGGGILLAASQDFF*L*EIRHTPHTISATICMCANDYKWSISAVYGP 1788 GT GGILL S F + E R +ISA I + + ++ VYGP Sbjct: 205 GTRGGILLLWSSGDFDVQEFRIGRFSISAQITDIRSGVTFLLTGVYGP 348 Score = 30.9 bits (61), Expect(3) = 2e-05 Identities = 10/19 (52%), Positives = 14/19 (73%) Frame = +2 / +1 Query: 1469 VMNWNVLGLNNPARRKGFH 1525 +++WNV GLN+PAR H Sbjct: 19 IISWNVRGLNSPARCNAVH 75 Score = 22.6 bits (43), Expect(3) = 2e-05 Identities = 8/13 (61%), Positives = 10/13 (76%) Frame = +1 / +1 Query: 1543 VSCLQETKLDFID 1581 ++C QETKL ID Sbjct: 103 LACFQETKLQSID 141
>LOC_Os07g33130:12007.t02993:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 3499 Score = 38.2 bits (77), Expect(2) = 3e-05 Identities = 20/62 (32%), Positives = 34/62 (54%) Frame = +1 / +1 Query: 1645 GTGGGILLAASQDFF*L*EIRHTPHTISATICMCANDYKWSISAVYGPQSETD*IIFIGE 1824 GT GGIL+ ++DF L + ++SAT+ + + ++AVYGP E+ F+ E Sbjct: 145 GTRGGILILWNEDFAELKDFVQGTFSLSATVSLKECQTTFLLTAVYGPTRESAKQTFLRE 324 Query: 1825 KK 1830 + Sbjct: 325 PR 330 Score = 30.9 bits (61), Expect(2) = 3e-05 Identities = 12/22 (54%), Positives = 16/22 (72%) Frame = +1 / +1 Query: 1543 VSCLQETKLDFIDCRLVAEILG 1608 ++CLQETK+ ID RLV + G Sbjct: 34 IACLQETKMSNIDARLVHSLGG 99
>LOC_Os04g50830:12004.t04561:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 3570 Score = 33.6 bits (67), Expect(3) = 4e-05 Identities = 19/48 (39%), Positives = 26/48 (54%) Frame = +1 / +1 Query: 1645 GTGGGILLAASQDFF*L*EIRHTPHTISATICMCANDYKWSISAVYGP 1788 GT GGILL S F + E+R +ISA I + + ++ VYGP Sbjct: 205 GTRGGILLLWSSGDFDVQEVRIGRFSISAQITDIRSGVTFLLTGVYGP 348 Score = 28.6 bits (56), Expect(3) = 4e-05 Identities = 10/19 (52%), Positives = 14/19 (73%) Frame = +2 / +1 Query: 1469 VMNWNVLGLNNPARRKGFH 1525 +++WNV GLN+PAR H Sbjct: 19 LISWNVRGLNSPARCNVVH 75 Score = 22.6 bits (43), Expect(3) = 4e-05 Identities = 8/13 (61%), Positives = 10/13 (76%) Frame = +1 / +1 Query: 1543 VSCLQETKLDFID 1581 ++C QETKL ID Sbjct: 103 LACFQETKLQSID 141
>LOC_Os04g29270:12004.t02620:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 6924 Score = 42.3 bits (86), Expect(2) = 5e-05 Identities = 15/25 (60%), Positives = 19/25 (76%) Frame = +2 / +3 Query: 1442 FPVLLPHGSVMNWNVLGLNNPARRK 1516 F +L H ++NWNV GLNNPARR+ Sbjct: 3378 FAQMLQHLRILNWNVCGLNNPARRE 3452 Score = 25.8 bits (50), Expect(2) = 5e-05 Identities = 13/24 (54%), Positives = 15/24 (62%) Frame = +1 / +3 Query: 1537 AFVSCLQETKLDFIDCRLVAEILG 1608 A + CLQETKL ID + EI G Sbjct: 3483 AGILCLQETKLSSIDQWIGKEIGG 3554
>LOC_Os07g33760:12007.t03054:unspliced-genomic retrotransposon protein, putative, LINE subclass| Length = 3571 Score = 32.2 bits (64), Expect(3) = 4e-04 Identities = 17/48 (35%), Positives = 25/48 (52%) Frame = +1 / +1 Query: 1645 GTGGGILLAASQDFF*L*EIRHTPHTISATICMCANDYKWSISAVYGP 1788 GT GGILL + F + E+R ISA + + + ++ VYGP Sbjct: 205 GTRGGILLLWNSAVFDVQEVRVGRFLISAQVTVILTGATFLLTGVYGP 348 Score = 26.7 bits (52), Expect(3) = 4e-04 Identities = 9/19 (47%), Positives = 13/19 (68%) Frame = +2 / +1 Query: 1469 VMNWNVLGLNNPARRKGFH 1525 +++WNV GLN+ AR H Sbjct: 19 IISWNVRGLNSAARCNTIH 75 Score = 22.1 bits (42), Expect(3) = 4e-04 Identities = 8/13 (61%), Positives = 10/13 (76%) Frame = +1 / +1 Query: 1543 VSCLQETKLDFID 1581 ++C QETKL ID Sbjct: 103 LACFQETKLQNID 141
>LOC_Os04g02600:12004.t00153:unspliced-genomic retrotransposon protein, putative, LINE subclass| Length = 4739 Score = 46.0 bits (94), Expect(2) = 5e-04 Identities = 20/60 (33%), Positives = 33/60 (55%) Frame = +1 / +2 Query: 1645 GTGGGILLAASQDFF*L*EIRHTPHTISATICMCANDYKWSISAVYGPQSETD*IIFIGE 1824 G GG+LLA + + ++ H +++A + +N W +S VYGPQ E D + F+ E Sbjct: 1337 GRSGGVLLAWRTTVWSVSDVHHADFSLTALVRHSSNVAPWWLSIVYGPQEEPDKLRFLDE 1516 Score = 24.9 bits (48), Expect(2) = 5e-04 Identities = 9/16 (56%), Positives = 13/16 (81%) Frame = +2 / +2 Query: 1466 SVMNWNVLGLNNPARR 1513 +V+ WNV GLN+ AR+ Sbjct: 1151 NVLVWNVRGLNSRARQ 1198
>LOC_Os10g39080:12010.t03149:unspliced-genomic retrotransposon protein, putative, LINE subclass| Length = 5034 Score = 32.7 bits (65), Expect(2) = 0.001 Identities = 17/52 (32%), Positives = 29/52 (55%) Frame = +1 / +3 Query: 1645 GTGGGILLAASQDFF*L*EIRHTPHTISATICMCANDYKWSISAVYGPQSET 1800 GT GGIL+ ++DF L + ++SAT+ + + ++AVYG E+ Sbjct: 2679 GTRGGILILWNEDFAELKDFVQGTFSLSATVSLKECQTTFLLTAVYGLTRES 2834 Score = 30.9 bits (61), Expect(2) = 0.001 Identities = 12/22 (54%), Positives = 16/22 (72%) Frame = +1 / +3 Query: 1543 VSCLQETKLDFIDCRLVAEILG 1608 ++CLQETK+ ID RLV + G Sbjct: 2568 IACLQETKMSNIDARLVHSLGG 2633
>LOC_Os09g33610:12009.t02937:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 9084 Score = 36.8 bits (74), Expect(2) = 0.002 Identities = 12/16 (75%), Positives = 15/16 (93%) Frame = +2 / +1 Query: 1469 VMNWNVLGLNNPARRK 1516 ++NWNV GLNNPARR+ Sbjct: 5548 ILNWNVRGLNNPARRE 5595 Score = 25.8 bits (50), Expect(2) = 0.002 Identities = 14/28 (50%), Positives = 17/28 (60%) Frame = +1 / +1 Query: 1534 NAFVSCLQETKLDFIDCRLVAEILGPLL 1617 +A + C+QETKL ID L EI G L Sbjct: 5623 DASILCIQETKLANIDQFLGREIGGSRL 5706 Score = 28.1 bits (55), Expect(2) = 0.38 Identities = 11/13 (84%), Positives = 11/13 (84%) Frame = -2 / -2 Query: 1512 LLAGLFRPRTFQF 1474 LLAGLF P TFQF Sbjct: 5591 LLAGLFNPLTFQF 5553 Score = 26.3 bits (51), Expect(2) = 0.38 Identities = 14/37 (37%), Positives = 17/37 (45%) Frame = -3 / -2 Query: 1658 PPPVPSRKEAKIISKRGPKISATSLQSIKSSLVSWRQ 1548 PP PS R P IS S+ ++LVSW Q Sbjct: 5747 PPLTPSAGRNSKRLSREPPISRPKNWSMLANLVSWMQ 5637
>LOC_Os06g46720:12006.t04358:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 5397 Score = 38.2 bits (77), Expect(2) = 0.002 Identities = 11/35 (31%), Positives = 24/35 (68%) Frame = +1 / +3 Query: 1720 TISATICMCANDYKWSISAVYGPQSETD*IIFIGE 1824 +++ +C A + WS+++VYGPQ + + ++F+ E Sbjct: 1146 SVTVNLCWLAANRSWSLTSVYGPQGDEEKLLFLEE 1250 Score = 30.9 bits (61), Expect(2) = 0.002 Identities = 11/16 (68%), Positives = 13/16 (81%) Frame = +2 / +3 Query: 1466 SVMNWNVLGLNNPARR 1513 S + WNV GLNNPA+R Sbjct: 882 SFLVWNVRGLNNPAKR 929
>LOC_Os04g47560:12004.t04281:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 6388 Score = 33.1 bits (66), Expect(4) = 0.003 Identities = 12/23 (52%), Positives = 17/23 (73%) Frame = +2 / +3 Query: 1445 PVLLPHGSVMNWNVLGLNNPARR 1513 P+ L S++ WNV GLNNP++R Sbjct: 3837 PLFLMSCSLLVWNVRGLNNPSKR 3905 Score = 26.7 bits (52), Expect(4) = 0.003 Identities = 9/24 (37%), Positives = 11/24 (45%) Frame = +1 / +3 Query: 1234 CCLACVPATNVWCALTACRIACKR 1305 CCL +WC L I C+R Sbjct: 2454 CCLRPPSRRRLWCCLPPFSIPCRR 2525 Score = 25.8 bits (50), Expect(4) = 0.003 Identities = 8/21 (38%), Positives = 14/21 (66%) Frame = +1 / +2 Query: 1762 WSISAVYGPQSETD*IIFIGE 1824 W+++ VYGPQ+ + F+ E Sbjct: 4163 WTLTNVYGPQAPEQKVQFLNE 4225 Score = 24.9 bits (48), Expect(4) = 0.003 Identities = 10/27 (37%), Positives = 16/27 (59%) Frame = +2 / +1 Query: 1160 PAHQAQTTRIQTPLSRQRGTRLPAAVA 1240 PAH + + +++P + QRG R A A Sbjct: 2149 PAHGEEVSHLRSPPASQRGGRPRPAAA 2229
>LOC_Os12g03554:12012.t00248:unspliced-genomic zinc finger C-x8-C-x5-C-x3-H type family protein| Length = 9875 Score = 33.1 bits (66), Expect(2) = 0.019 Identities = 12/25 (48%), Positives = 18/25 (72%) Frame = +2 / -1 Query: 1439 MFPVLLPHGSVMNWNVLGLNNPARR 1513 +FP+ P+ +++ WNV GLN ARR Sbjct: 1802 LFPMTSPNYNILVWNVRGLNAGARR 1728 Score = 25.8 bits (50), Expect(2) = 0.019 Identities = 11/22 (50%), Positives = 15/22 (68%) Frame = +1 / -1 Query: 1552 LQETKLDFIDCRLVAEILGPLL 1617 LQET+L+ I ++ILGP L Sbjct: 1703 LQETRLNVISLMSASQILGPNL 1638
>LOC_Os07g02490:12007.t00140:unspliced-genomic retrotransposon protein, putative, LINE subclass| Length = 6589 Score = 39.6 bits (80), Expect(2) = 0.020 Identities = 17/60 (28%), Positives = 33/60 (55%) Frame = +1 / +2 Query: 1645 GTGGGILLAASQDFF*L*EIRHTPHTISATICMCANDYKWSISAVYGPQSETD*IIFIGE 1824 G GG+LLA+ + + ++ ++++ + ++ W +S VYGPQ E D + F+ E Sbjct: 3329 GRSGGVLLASRTTVWSVSDVHLADFSLASLVRHSSDVAPWWLSVVYGPQEEPDKLRFLDE 3508 Score = 26.3 bits (51), Expect(2) = 0.020 Identities = 9/16 (56%), Positives = 13/16 (81%) Frame = +2 / +2 Query: 1466 SVMNWNVLGLNNPARR 1513 +++ WNV GLN+ ARR Sbjct: 3143 NILVWNVRGLNSRARR 3190
>LOC_Os03g56910:12003.t04957:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 3929 Score = 26.3 bits (51), Expect(3) = 0.021 Identities = 15/48 (31%), Positives = 24/48 (50%) Frame = +1 / +3 Query: 1645 GTGGGILLAASQDFF*L*EIRHTPHTISATICMCANDYKWSISAVYGP 1788 GT GGI++ + L +IR ISA + + + ++ VYGP Sbjct: 1035 GTRGGIIILWNNAALILQDIRIGRFLISAQVMVPLTGATFLMTGVYGP 1178 Score = 24.4 bits (47), Expect(3) = 0.021 Identities = 9/18 (50%), Positives = 12/18 (66%) Frame = +2 / +3 Query: 1472 MNWNVLGLNNPARRKGFH 1525 ++WNV LN+PAR H Sbjct: 852 ISWNVRVLNSPARCNTVH 905 Score = 24.0 bits (46), Expect(3) = 0.021 Identities = 9/13 (69%), Positives = 11/13 (84%) Frame = +1 / +3 Query: 1543 VSCLQETKLDFID 1581 ++CLQETKL ID Sbjct: 933 LACLQETKLQNID 971
>LOC_Os10g13370:12010.t01067:unspliced-genomic retrotransposon protein, putative, LINE subclass| Length = 6227 Score = 35.4 bits (71), Expect(2) = 0.035 Identities = 11/24 (45%), Positives = 19/24 (79%) Frame = +1 / +1 Query: 1753 DYKWSISAVYGPQSETD*IIFIGE 1824 D WS+S+VYGPQ++ + ++F+ E Sbjct: 3397 DRSWSLSSVYGPQADDEKLLFLDE 3468 Score = 29.5 bits (58), Expect(2) = 0.035 Identities = 11/16 (68%), Positives = 13/16 (81%) Frame = +2 / +1 Query: 1466 SVMNWNVLGLNNPARR 1513 SV+ WNV GLNN A+R Sbjct: 3106 SVLVWNVRGLNNTAKR 3153
>LOC_Os03g31880:12003.t02783:unspliced-genomic SHR, putative, expressed| Length = 2471 Score = 39.6 bits (80), Expect = 0.073 Identities = 17/46 (36%), Positives = 25/46 (54%) Frame = -3 / +2 Query: 1685 KSWEAARRIPPPVPSRKEAKIISKRGPKISATSLQSIKSSLVSWRQ 1548 +SW RR PPP P R+ + +RG S + +S +S SWR+ Sbjct: 1070 RSWRPRRRAPPPPPPRRLHRRRRRRGCTSST*ATRSARSGRPSWRR 1207
>LOC_Os02g51200:12002.t04704:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 5897 Score = 34.5 bits (69), Expect(2) = 0.088 Identities = 17/48 (35%), Positives = 27/48 (56%) Frame = +1 / +3 Query: 1645 GTGGGILLAASQDFF*L*EIRHTPHTISATICMCANDYKWSISAVYGP 1788 GT GGILL + F + E+R + +ISA + + + ++ VYGP Sbjct: 3231 GTRGGILLLWNSAVFDVQEVRVSRFSISAQVTVILTGATFLLTGVYGP 3374 Score = 22.1 bits (42), Expect(2) = 0.088 Identities = 8/13 (61%), Positives = 10/13 (76%) Frame = +1 / +3 Query: 1543 VSCLQETKLDFID 1581 ++C QETKL ID Sbjct: 3129 LACFQETKLQNID 3167
>LOC_Os01g06050:12001.t00489:unspliced-genomic expressed protein| Length = 1789 Score = 31.3 bits (62), Expect(2) = 0.094 Identities = 10/15 (66%), Positives = 13/15 (86%) Frame = +2 / +2 Query: 1469 VMNWNVLGLNNPARR 1513 ++NWNV GLNN AR+ Sbjct: 1652 ILNWNVRGLNNQARK 1696 Score = 25.4 bits (49), Expect(2) = 0.094 Identities = 10/17 (58%), Positives = 13/17 (76%) Frame = +1 / +2 Query: 1528 QNNAFVSCLQETKLDFI 1578 Q NA + CLQETK++ I Sbjct: 1721 QMNATIVCLQETKMNEI 1771
>LOC_Os03g05060:12003.t00379:unspliced-genomic xyloglucan galactosyltransferase KATAMARI 1, putative, expressed| Length = 1883 Score = 31.8 bits (63), Expect(2) = 0.097 Identities = 19/59 (32%), Positives = 26/59 (44%) Frame = -1 / +3 Query: 403 SRSTPANSSAGGVTFLTTATGGRLDSDSAGWSSNAHTFGGFLLTTSSGNVNLIGGGHAG 227 SRSTPA++S+ TT G S S S + G + T+S + GG G Sbjct: 639 SRSTPASTSSATTGVTTTRRGTPRRSTSRSGSCGGRSGGAWAAATTSSSPGGRGGTSGG 815 Score = 29.9 bits (59), Expect(2) = 0.097 Identities = 14/33 (42%), Positives = 17/33 (51%) Frame = -1 / +1 Query: 1264 RWLPGHMLSNSSRQPRPSLAAEGRLDAGGLGLV 1166 R L GH+ R+PRP+ GR A G G V Sbjct: 439 RPLAGHVRVRQQRRPRPAARRPGRRRADGRGRV 537 Score = 29.0 bits (57), Expect(2) = 0.31 Identities = 12/27 (44%), Positives = 15/27 (55%) Frame = +2 / -3 Query: 1358 FLLAVVALHLMCPWSACFISSHGLGCP 1438 +L A+VALH W+ F S G G P Sbjct: 1107 WLHALVALHCAMIWARMFFGSSGRGAP 1027 Score = 25.8 bits (50), Expect(2) = 0.31 Identities = 9/24 (37%), Positives = 10/24 (41%) Frame = +1 / -1 Query: 1246 CVPATNVWCALTACRIACKRSRVC 1317 C P + C T R C RS C Sbjct: 1154 CCPGSGTGCCRTRSRAGCTRSSRC 1083
>LOC_Os03g48850:12003.t04237:unspliced-genomic valyl-tRNA synthetase, putative, expressed| Length = 8307 Score = 39.1 bits (79), Expect = 0.10 Identities = 21/75 (28%), Positives = 31/75 (41%) Frame = -1 / +1 Query: 1309 CSSCMQSDMQSERTRRWLPGHMLSNSSRQPRPSLAAEGRLDAGGLGLVSWKEPSSEHGQD 1130 C + D R R+ +P H L + P AA GR A +S + PSS Sbjct: 40 CCAAAARDSSCSRRRKLIPHHRLPAACADLHP*AAARGRPAASAASSLSGEHPSSSSSHP 219 Query: 1129 ALQFQTYLG*QQTIS 1085 +L +LG T++ Sbjct: 220 SLPTHLFLGFALTLA 264
>LOC_Os04g47059:12004.t04234:unspliced-genomic TRANSPARENT TESTA 8 protein, putative, expressed| Length = 24227 Score = 38.2 bits (77), Expect(2) = 0.16 Identities = 18/60 (30%), Positives = 32/60 (53%) Frame = +1 / +3 Query: 1645 GTGGGILLAASQDFF*L*EIRHTPHTISATICMCANDYKWSISAVYGPQSETD*IIFIGE 1824 G GG+LLA + + ++ +++A + ++ W +S VYGPQ E D + F+ E Sbjct: 3159 GRSGGVLLAWRTTVWSVSDVHLADFSLTALV*HSSDVAPWWLSIVYGPQEEPDKLRFLDE 3338 Score = 26.3 bits (51), Expect(2) = 0.16 Identities = 9/16 (56%), Positives = 13/16 (81%) Frame = +2 / +3 Query: 1466 SVMNWNVLGLNNPARR 1513 +++ WNV GLN+ ARR Sbjct: 2973 NILVWNVRGLNSRARR 3020
>LOC_Os10g04130:12010.t00302:unspliced-genomic expressed protein| Length = 2676 Score = 30.4 bits (60), Expect(2) = 0.17 Identities = 10/20 (50%), Positives = 14/20 (70%) Frame = +2 / +1 Query: 1469 VMNWNVLGLNNPARRKGFHL 1528 ++NWNV GLN+ R+K L Sbjct: 2536 ILNWNVRGLNSQVRKKSVKL 2595 Score = 25.4 bits (49), Expect(2) = 0.17 Identities = 10/17 (58%), Positives = 13/17 (76%) Frame = +1 / +1 Query: 1528 QNNAFVSCLQETKLDFI 1578 Q NA + CLQETK++ I Sbjct: 2605 QMNATIVCLQETKMNQI 2655
>LOC_Os11g13670:12011.t01201:unspliced-genomic gibberellin receptor GID1L2, putative, expressed| Length = 1541 Score = 37.7 bits (76), Expect = 0.26 Identities = 19/54 (35%), Positives = 25/54 (46%) Frame = -2 / +3 Query: 1380 RATTASRNLISNGSSRKQDTKADSAPLACNPTCSQSAPDVGCRDTC*ATAAGSR 1219 R TASR S+ + R + A S P T + + C C +TAAGSR Sbjct: 243 RRATASRRATSSSTRRSRSAPASSTPAPPEETAAPATRRSRCPSWCSSTAAGSR 404
>LOC_Os10g07180:12010.t00579:unspliced-genomic retrotransposon protein, putative, LINE subclass| Length = 2845 Score = 30.4 bits (60), Expect(3) = 0.42 Identities = 9/21 (42%), Positives = 17/21 (80%) Frame = +1 / +2 Query: 1762 WSISAVYGPQSETD*IIFIGE 1824 W+++ VYGPQ ++D ++F+ E Sbjct: 2204 WTLTNVYGPQLDSDKLLFLEE 2266 Score = 26.3 bits (51), Expect(3) = 0.42 Identities = 8/16 (50%), Positives = 13/16 (81%) Frame = +2 / +3 Query: 1466 SVMNWNVLGLNNPARR 1513 +++ WNV GLN+P +R Sbjct: 1899 TLLVWNVRGLNHPGKR 1946 Score = 23.5 bits (45), Expect(3) = 0.42 Identities = 9/21 (42%), Positives = 13/21 (61%) Frame = +2 / +1 Query: 458 HRP*SSSSRLDEEISVGNSGR 520 HRP S + R E ++ NSG+ Sbjct: 1600 HRPSSYTPRRSERLAAQNSGK 1662
>LOC_Os11g08542:12011.t00746:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 2971 Score = 36.8 bits (74), Expect = 0.49 Identities = 12/22 (54%), Positives = 17/22 (77%) Frame = +1 / +1 Query: 1759 KWSISAVYGPQSETD*IIFIGE 1824 +WSI+ VYGPQ E D ++F+ E Sbjct: 19 QWSITVVYGPQLEADKVVFLSE 84
>LOC_Os02g45810:12002.t04168:unspliced-genomic transparent testa glabra 1 protein, putative, expressed| Length = 3101 Score = 29.5 bits (58), Expect(2) = 0.54 Identities = 15/52 (28%), Positives = 20/52 (38%) Frame = +3 / +3 Query: 222 SHPACPPPMRLTLPDEVVNKNPPNVCAFDDQPAESESSLPPVAVVRKVTPPA 377 S P PPP + P ++PP A P+ P + TPPA Sbjct: 546 SPPPPPPPRPSSAPSSTTARHPPPSSAPPSPPSTGTRPSPAASGPPPSTPPA 701 Score = 24.4 bits (47), Expect(2) = 0.54 Identities = 11/21 (52%), Positives = 12/21 (57%) Frame = +1 / +1 Query: 109 PGSTHQASVPP*SQLTASLPR 171 P HQA VPP +L A PR Sbjct: 436 PLPAHQAPVPPARRLRAPPPR 498
>LOC_Os04g33980:12004.t03073:unspliced-genomic transposon protein, putative, Mutator sub-class, expressed| Length = 3378 Score = 29.9 bits (59), Expect(3) = 0.56 Identities = 13/23 (56%), Positives = 14/23 (60%) Frame = -2 / +1 Query: 75 LQTAAVRRRLPATPPRHPPTSRR 7 L AA+RRRL PRHP RR Sbjct: 2725 LPRAALRRRLGEPAPRHPHRGRR 2793 Score = 25.8 bits (50), Expect(3) = 0.56 Identities = 11/21 (52%), Positives = 13/21 (61%) Frame = -1 / +2 Query: 1156 EPSSEHGQDALQFQTYLG*QQ 1094 E S EH +QFQ Y G*Q+ Sbjct: 1565 EHSREHDISTIQFQRYSG*QR 1627 Score = 24.4 bits (47), Expect(3) = 0.56 Identities = 11/30 (36%), Positives = 15/30 (50%) Frame = -3 / +3 Query: 1673 AARRIPPPVPSRKEAKIISKRGPKISATSL 1584 AARR P P + A +RGP++ L Sbjct: 927 AARRAPVPREEPRRAGAPRRRGPQVGGRLL 1016
>LOC_Os08g19790:12008.t01797:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 946 Score = 24.0 bits (46), Expect(3) = 0.57 Identities = 8/15 (53%), Positives = 11/15 (73%) Frame = +2 / -2 Query: 1469 VMNWNVLGLNNPARR 1513 + NWNV GLN A++ Sbjct: 405 LFNWNVRGLNAKAKQ 361 Score = 23.1 bits (44), Expect(3) = 0.57 Identities = 8/21 (38%), Positives = 15/21 (71%) Frame = +1 / -1 Query: 1642 DGTGGGILLAASQDFF*L*EI 1704 DG+ G ++LA ++FF L ++ Sbjct: 217 DGSKGRVILACDENFFSLSDV 155 Score = 22.6 bits (43), Expect(3) = 0.57 Identities = 8/14 (57%), Positives = 11/14 (78%) Frame = +1 / -2 Query: 1528 QNNAFVSCLQETKL 1569 Q+ A + CLQETK+ Sbjct: 336 QHGASIVCLQETKV 295
>LOC_Os08g10140:12008.t00899:unspliced-genomic retrotransposon protein, putative, LINE subclass| Length = 2934 Score = 30.4 bits (60), Expect(3) = 0.58 Identities = 9/21 (42%), Positives = 17/21 (80%) Frame = +1 / +2 Query: 1762 WSISAVYGPQSETD*IIFIGE 1824 W+++ VYGPQ ++D ++F+ E Sbjct: 560 WTLTNVYGPQLDSDKLLFLEE 622 Score = 25.4 bits (49), Expect(3) = 0.58 Identities = 11/29 (37%), Positives = 17/29 (58%) Frame = +1 / +3 Query: 1531 NNAFVSCLQETKLDFIDCRLVAEILGPLL 1617 ++A + C QE+KLD +D L + G L Sbjct: 327 SSASIFCCQESKLDVLDRSLSIQSCGHAL 413 Score = 24.0 bits (46), Expect(3) = 0.58 Identities = 7/15 (46%), Positives = 12/15 (80%) Frame = +2 / +3 Query: 1466 SVMNWNVLGLNNPAR 1510 +++ WNV GLN+P + Sbjct: 252 TLLVWNVRGLNHPGK 296
>LOC_Os02g58530:12002.t05423:unspliced-genomic major facilitator superfamily protein, expressed| Length = 1959 Score = 31.8 bits (63), Expect(2) = 0.61 Identities = 13/31 (41%), Positives = 18/31 (58%) Frame = -3 / +3 Query: 1352 SQTEAAGNRIQKQTLLLLHAIRHAVRAHQTL 1260 +Q AA +R+ + LLLH + H RAH L Sbjct: 399 AQHAAAAHRLHRHVPLLLHGLPHHARAHPQL 491 Score = 27.2 bits (53), Expect(2) = 0.61 Identities = 10/16 (62%), Positives = 10/16 (62%) Frame = -2 / +3 Query: 57 RRRLPATPPRHPPTSR 10 RRR P PPRH P R Sbjct: 849 RRRPPRQPPRHEPPRR 896
>LOC_Os02g50810:12002.t04665:unspliced-genomic expressed protein| Length = 2038 Score = 33.1 bits (66), Expect(2) = 0.62 Identities = 13/40 (32%), Positives = 17/40 (42%) Frame = +3 / -3 Query: 225 HPACPPPMRLTLPDEVVNKNPPNVCAFDDQPAESESSLPP 344 HP PPP R +P + + P A P+ S PP Sbjct: 629 HPPPPPPKRRRVPCSAASASTPPAAAAPSSPSPPSSPAPP 510 Score = 25.8 bits (50), Expect(2) = 0.62 Identities = 11/20 (55%), Positives = 11/20 (55%) Frame = +1 / -2 Query: 10 TAGRWVARRSCRKATTDCCC 69 TA RWV R RK T CC Sbjct: 1524 TAIRWVNSRVIRKDGTFACC 1465
>LOC_Os02g45540:12002.t04141:unspliced-genomic dTDP-4-dehydrorhamnose reductase, putative, expressed| Length = 4095 Score = 35.0 bits (70), Expect(2) = 0.64 Identities = 18/57 (31%), Positives = 29/57 (50%) Frame = +3 / +2 Query: 285 PPNVCAFDDQPAESESSLPPVAVVRKVTPPAEEFAGVDLEGNGAPASTSE*STNSQS 455 PP F P+ +S P +A R+ T +G+ + NG+ +STSE + +QS Sbjct: 326 PPRQAPFSTLPSWPPTSHPDLAAPRRATLFRAASSGMGVATNGSSSSTSESAETAQS 496 Score = 24.9 bits (48), Expect(2) = 0.64 Identities = 7/17 (41%), Positives = 11/17 (64%) Frame = +1 / +3 Query: 1714 PHTISATICMCANDYKW 1764 PH + +TIC + Y+W Sbjct: 2865 PHYLFSTICFEVSTYRW 2915
>LOC_Os03g02180:12003.t00110:unspliced-genomic cytochrome P450 84A1, putative, expressed| Length = 1789 Score = 36.3 bits (73), Expect = 0.68 Identities = 14/33 (42%), Positives = 16/33 (48%) Frame = +1 / +2 Query: 1213 RDAAAGCCCLACVPATNVWCALTACRIACKRSR 1311 R AGCC A +T WC + R C RSR Sbjct: 209 RPGTAGCCTSASAASTWWWCRARSTRARCSRSR 307
>LOC_Os03g31060:12003.t02707:unspliced-genomic retrotransposon protein, putative, LINE subclass| Length = 3994 Score = 27.6 bits (54), Expect(2) = 0.72 Identities = 10/16 (62%), Positives = 12/16 (75%) Frame = +2 / +1 Query: 1466 SVMNWNVLGLNNPARR 1513 SV+ WNV GLNN +R Sbjct: 1261 SVLVWNVRGLNNSGKR 1308 Score = 25.8 bits (50), Expect(2) = 0.72 Identities = 11/23 (47%), Positives = 15/23 (65%) Frame = +1 / +3 Query: 1549 CLQETKLDFIDCRLVAEILGPLL 1617 C QE+KL +D +LVA+ G L Sbjct: 1356 CCQESKLAVLDQQLVAQTCGASL 1424
>LOC_Os04g51930:12004.t04669:unspliced-genomic retrotransposon protein, putative, LINE subclass| Length = 5683 Score = 35.9 bits (72), Expect = 0.93 Identities = 14/26 (53%), Positives = 19/26 (73%) Frame = +2 / +2 Query: 1439 MFPVLLPHGSVMNWNVLGLNNPARRK 1516 +F V + SV+ WNV GLNNPA+R+ Sbjct: 3185 LFLVSMSRLSVLVWNVRGLNNPAKRR 3262
>LOC_Os04g06870:12004.t00562:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 5147 Score = 29.5 bits (58), Expect(2) = 0.95 Identities = 10/30 (33%), Positives = 19/30 (63%) Frame = +2 / +1 Query: 1436 PMFPVLLPHGSVMNWNVLGLNNPARRKGFH 1525 P +++ + +++WNV GLN+PA+ H Sbjct: 2932 PPSHMVMQNIELLSWNVRGLNSPAKCSAVH 3021 Score = 23.5 bits (45), Expect(2) = 0.95 Identities = 10/27 (37%), Positives = 15/27 (55%) Frame = +1 / +1 Query: 1528 QNNAFVSCLQETKLDFIDCRLVAEILG 1608 + N ++C QETKL +D L + G Sbjct: 3034 ETNCTIACFQETKLWAMDDGLARFLSG 3114
>LOC_Os05g29676:12005.t02567:unspliced-genomic zinc finger, C3HC4 type family protein| Length = 2968 Score = 34.1 bits (68), Expect(2) = 1.2 Identities = 14/25 (56%), Positives = 16/25 (64%) Frame = -2 / -2 Query: 84 DLLLQTAAVRRRLPATPPRHPPTSR 10 D+LL +A RR LP PPRHP R Sbjct: 306 DVLLLLSAPRRPLPQPPPRHPRRGR 232 Score = 24.4 bits (47), Expect(2) = 1.2 Identities = 12/29 (41%), Positives = 14/29 (48%) Frame = -1 / -2 Query: 424 LAGAPLPSRSTPANSSAGGVTFLTTATGG 338 LAGA + +P SAGG T GG Sbjct: 2247 LAGAGGAAEPSPLPDSAGGKAAAATTPGG 2161
>LOC_Os08g16600:12008.t01532:unspliced-genomic expressed protein| Length = 4728 Score = 35.4 bits (71), Expect = 1.3 Identities = 15/41 (36%), Positives = 19/41 (46%) Frame = +3 / -2 Query: 222 SHPACPPPMRLTLPDEVVNKNPPNVCAFDDQPAESESSLPP 344 S+PA P P L + + PP C PA + SS PP Sbjct: 551 SYPAIPFPSHSLLATTLPSPPPPTTCTLPSSPAVTHSSPPP 429
>LOC_Os06g43170:12006.t04007:unspliced-genomic transposon protein, putative, unclassified, expressed| Length = 3911 Score = 35.4 bits (71), Expect = 1.3 Identities = 17/55 (30%), Positives = 23/55 (41%) Frame = +1 / +2 Query: 7 ATAGRWVARRSCRKATTDCCCLEQKIHKCEYGLLPGSTHQASVPP*SQLTASLPR 171 A+ RW RR CR ++ CC +C ST S P + TA+ R Sbjct: 440 ASTRRWRRRRRCRGSSASCCPTRSCPGRCRPSWAASSTSATSTSPGTASTAACRR 604
>LOC_Os04g27750:12004.t02478:unspliced-genomic expressed protein| Length = 560 Score = 35.4 bits (71), Expect = 1.3 Identities = 16/30 (53%), Positives = 18/30 (60%) Frame = -1 / -2 Query: 1267 RRWLPGHMLSNSSRQPRPSLAAEGRLDAGG 1178 R W P L+ SR+ RPSLAA GR GG Sbjct: 100 RAWPPPPPLAPGSRRHRPSLAAGGRAGGGG 11
>LOC_Os02g09630:12002.t00810:unspliced-genomic nitrate-induced NOI protein, expressed| Length = 2952 Score = 35.4 bits (71), Expect = 1.3 Identities = 12/29 (41%), Positives = 13/29 (44%) Frame = +1 / -3 Query: 1231 CCCLACVPATNVWCALTACRIACKRSRVC 1317 CCC C A W A T CR R+ C Sbjct: 2134 CCCCCCTAAGTAWAARTCCRGCWPRTPRC 2048
>LOC_Os05g17830:12005.t01552:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 6191 Score = 32.2 bits (64), Expect(2) = 1.7 Identities = 15/40 (37%), Positives = 21/40 (52%) Frame = -3 / +1 Query: 1601 ISATSLQSIKSSLVSWRQETNALF*DETPFSLPDYLDLEH 1482 +SA L S+ S + QE +F +ETP LP +EH Sbjct: 2014 LSANDLTSVPSVVARVLQEYEDVFPEETPVGLPPLRGIEH 2133 Score = 26.7 bits (52), Expect(2) = 1.7 Identities = 14/42 (33%), Positives = 17/42 (40%) Frame = -3 / +3 Query: 392 PGEFFCRRRDLPDDSYGRETRFRFRRLVIKRTHIRRVLVDNL 267 P + D P SY + T RR RTH R V+ L Sbjct: 5271 PTQLTVHHLDFPSWSYCQITEHHSRRPTASRTHFRSHFVEAL 5396
>LOC_Os04g01610:12004.t00059:unspliced-genomic expressed protein| Length = 1998 Score = 35.0 bits (70), Expect = 1.7 Identities = 13/26 (50%), Positives = 16/26 (61%) Frame = -3 / +2 Query: 1667 RRIPPPVPSRKEAKIISKRGPKISAT 1590 RR+PPP PSR + S R P SA+ Sbjct: 344 RRLPPPTPSRARRRSASSRSPSASAS 421
>LOC_Os06g44010:12006.t04089:unspliced-genomic OsWRKY28 - Superfamily of rice TFs having WRKY and zinc finger| domains, expressed Length = 1781 Score = 34.5 bits (69), Expect = 2.4 Identities = 14/30 (46%), Positives = 16/30 (53%) Frame = -3 / +1 Query: 1679 WEAARRIPPPVPSRKEAKIISKRGPKISAT 1590 W A RR PPP S A+ S R P S+T Sbjct: 739 WSARRRPPPPPRSASSARTASPRSPSASST 828
>LOC_Os05g12510:12005.t01078:unspliced-genomic hypothetical protein| Length = 2288 Score = 34.5 bits (69), Expect = 2.4 Identities = 14/49 (28%), Positives = 27/49 (55%) Frame = -3 / -2 Query: 722 LIQICLDYRIQISQNYQVWPLASFIVNILVDRPLNYACNNLRLMNEKQI 576 ++ CL Y +QI Q+Y PL S +++ + +Y C+ L L++ + Sbjct: 832 MVTTCLSYAVQIIQSYMEVPLFSMSMSLSLSLSPSY*CSFLLLVSSSSL 686
>LOC_Os02g20420:12002.t01834:unspliced-genomic retrotransposon protein, putative, LINE subclass| Length = 12711 Score = 34.5 bits (69), Expect = 2.4 Identities = 15/29 (51%), Positives = 19/29 (65%) Frame = -3 / -1 Query: 1619 SKRGPKISATSLQSIKSSLVSWRQETNAL 1533 SK GP+ S T +S S+L SW+ TNAL Sbjct: 8895 SKSGPQSSKTVTRSTTSNLDSWKHTTNAL 8809
>LOC_Os03g51610:12003.t04488:unspliced-genomic inositol-tetrakisphosphate 1-kinase 3, putative, expressed| Length = 7303 Score = 34.5 bits (69), Expect = 2.4 Identities = 22/61 (36%), Positives = 30/61 (49%) Frame = -2 / +2 Query: 183 YIYRARQTGRQLGLRRNTRLVSGSRKKSIFALMDLLLQTAAVRRRLPATPPRHPPTSRRI 4 ++ R+R L + + LVS R+ L+ TAA RR LP P R PTSR + Sbjct: 6695 WVARSRLGSPDLAVDGDGGLVSLPRRWRARRLVGKEATTAAGRRALPLAPQRGLPTSRVL 6874 Query: 3 F 1 F Sbjct: 6875 F 6877
>LOC_Os02g51330:12002.t04717:unspliced-genomic RINT-1 / TIP-1 family protein, expressed| Length = 5422 Score = 34.5 bits (69), Expect = 2.4 Identities = 13/35 (37%), Positives = 18/35 (51%) Frame = -1 / +3 Query: 1324 YKSRLCSSCMQSDMQSERTRRWLPGHMLSNSSRQP 1220 Y S C ++Q R R L GH+++N RQP Sbjct: 3627 YSESFLSLCSLQELQKRRKARQLEGHIVNNQLRQP 3731
>LOC_Os01g40700:12001.t03593:unspliced-genomic expressed protein| Length = 2442 Score = 28.6 bits (56), Expect(2) = 3.3 Identities = 11/31 (35%), Positives = 19/31 (61%) Frame = -3 / +2 Query: 1652 PVPSRKEAKIISKRGPKISATSLQSIKSSLV 1560 P PSR AK++S+RG ++ S + S+ + Sbjct: 239 PSPSRARAKLVSRRGATLACLSPHTQSSTRI 331 Score = 22.6 bits (43), Expect(2) = 3.3 Identities = 7/9 (77%), Positives = 9/9 (100%) Frame = -3 / +3 Query: 1667 RRIPPPVPS 1641 +RIPPP+PS Sbjct: 210 QRIPPPLPS 236
>LOC_Os12g35710:12012.t03259:unspliced-genomic extensin-like protein, putative, expressed| Length = 2620 Score = 34.1 bits (68), Expect = 3.3 Identities = 17/52 (32%), Positives = 22/52 (42%) Frame = +3 / +1 Query: 237 PPPMRLTLPDEVVNKNPPNVCAFDDQPAESESSLPPVAVVRKVTPPAEEFAG 392 PPP L+ P VV PP + E LPP+ +PP +F G Sbjct: 2203 PPPPVLSPPPPVVPSPPPPAPSLPPPAPEELIILPPILSHSYASPPPPQFEG 2358
>LOC_Os12g20350:12012.t01876:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 7250 Score = 34.1 bits (68), Expect = 3.3 Identities = 11/17 (64%), Positives = 13/17 (76%) Frame = +2 / +3 Query: 845 SSSGRKRQCGTNWCSHL 895 SS G+ + C TNWCSHL Sbjct: 2208 SSKGKYKVCPTNWCSHL 2258
>LOC_Os09g20284:12009.t01762:unspliced-genomic polyamine oxidase precursor, putative, expressed| Length = 10244 Score = 34.1 bits (68), Expect = 3.3 Identities = 15/27 (55%), Positives = 15/27 (55%) Frame = -1 / -1 Query: 418 GAPLPSRSTPANSSAGGVTFLTTATGG 338 G PLP ST A GGV LTTA G Sbjct: 1268 GGPLPLGSTAAGFGCGGVAMLTTAGSG 1188
>LOC_Os01g32640:12001.t02837:unspliced-genomic expressed protein| Length = 3699 Score = 30.9 bits (61), Expect(2) = 3.5 Identities = 16/42 (38%), Positives = 21/42 (50%) Frame = -2 / +1 Query: 1392 HIK*RATTASRNLISNGSSRKQDTKADSAPLACNPTCSQSAP 1267 H + AT R +S S+ T +SAPL P S+SAP Sbjct: 25 HRRAAATCVVRQYVSRASALLFATPVNSAPLPSPPASSRSAP 150 Score = 26.3 bits (51), Expect(2) = 3.5 Identities = 15/38 (39%), Positives = 18/38 (47%) Frame = -1 / +2 Query: 1267 RRWLPGHMLSNSSRQPRPSLAAEGRLDAGGLGLVSWKE 1154 RRW + S R SL + R A GL LVSW + Sbjct: 1028 RRWELEKEMPVSEVLDRHSLVRQVRTVASGLVLVSWDD 1141
>LOC_Os07g40220:12007.t03682:unspliced-genomic expressed protein| Length = 1015 Score = 32.7 bits (65), Expect(2) = 3.6 Identities = 13/17 (76%), Positives = 13/17 (76%) Frame = -2 / -1 Query: 57 RRRLPATPPRHPPTSRR 7 RRR PATP R PP SRR Sbjct: 568 RRRPPATPARSPPRSRR 518 Score = 22.6 bits (43), Expect(2) = 3.6 Identities = 7/10 (70%), Positives = 9/10 (90%) Frame = -2 / -1 Query: 645 EHPC*STTEL 616 +HPC STTE+ Sbjct: 907 QHPCPSTTEI 878
>LOC_Os05g51000:12005.t04530:unspliced-genomic expressed protein| Length = 3561 Score = 33.6 bits (67), Expect = 4.5 Identities = 14/28 (50%), Positives = 18/28 (64%) Frame = -3 / +3 Query: 1724 IVCGVCLISYNQKKSWEAARRIPPPVPS 1641 IVC C S NQ SWE++ +I P+PS Sbjct: 2328 IVCSGCRWSGNQAGSWESSTKIN*PLPS 2411
>LOC_Os01g06360:12001.t00519:unspliced-genomic transposon protein, putative, unclassified| Length = 4621 Score = 33.6 bits (67), Expect = 4.5 Identities = 21/76 (27%), Positives = 33/76 (43%) Frame = -3 / -3 Query: 326 RFRRLVIKRTHIRRVLVDNLVGQCQSHRRRACRMARQSINQIITNKRNTSIERGRLAVSW 147 R R L++K T+ V + Q RRR R R+ ++ + R S+ GR +W Sbjct: 1433 RVRTLLMKATNRSSVSCRSNARSMQRKRRRGTRAPRRHHHRETAHARIRSVAVGRKPRTW 1254 Query: 146 D*GGTLAW*VDPGRSP 99 +L W + SP Sbjct: 1253 TRTSSLRWLIGLSSSP 1206
>LOC_Os06g13740:12006.t01249:unspliced-genomic transposon protein, putative, unclassified| Length = 3050 Score = 33.6 bits (67), Expect = 4.5 Identities = 16/34 (47%), Positives = 21/34 (61%) Frame = -2 / +1 Query: 1377 ATTASRNLISNGSSRKQDTKADSAPLACNPTCSQ 1276 ATTA+ N IS+ SR D++A SAP P +Q Sbjct: 352 ATTATANTISSEDSRTDDSEAQSAPSQDIPCSTQ 453
>LOC_Os01g65380:12001.t05904:unspliced-genomic patellin-5, putative, expressed| Length = 3162 Score = 33.6 bits (67), Expect = 4.5 Identities = 22/77 (28%), Positives = 35/77 (45%) Frame = -1 / -2 Query: 397 STPANSSAGGVTFLTTATGGRLDSDSAGWSSNAHTFGGFLLTTSSGNVNLIGGGHAGWLV 218 S PA+ A + L SA SS+A + +T++ L GGG G L Sbjct: 764 SVPASGGAAAAAATSALGSSSLAGSSALGSSSALVSSALVSSTAASTFALGGGGGGGRLN 585 Query: 217 NQSIKL*PINGIHLSSA 167 +Q+ + I+ ++ SSA Sbjct: 584 SQAARAAAISCLNSSSA 534
>LOC_Os01g39110:12001.t03444:unspliced-genomic zinc finger protein, putative, expressed| Length = 2648 Score = 33.6 bits (67), Expect = 4.5 Identities = 9/17 (52%), Positives = 13/17 (76%) Frame = +1 / -2 Query: 1231 CCCLACVPATNVWCALT 1281 CCC +C A++ WCA+T Sbjct: 1861 CCCCSCSAASSWWCAMT 1811
>LOC_Os04g24530:12004.t02165:unspliced-genomic 4-coumarate--CoA ligase 2, putative, expressed| Length = 2121 Score = 32.7 bits (65), Expect(2) = 5.2 Identities = 14/37 (37%), Positives = 23/37 (62%) Frame = -1 / -2 Query: 409 LPSRSTPANSSAGGVTFLTTATGGRLDSDSAGWSSNA 299 L +RS +NSSA G+ + + TGG ++ WS++A Sbjct: 941 LRARSERSNSSATGLLTMASITGGTSGANMTRWSTSA 831 Score = 23.1 bits (44), Expect(2) = 5.2 Identities = 8/13 (61%), Positives = 8/13 (61%) Frame = -2 / -3 Query: 45 PATPPRHPPTSRR 7 P PPR PP RR Sbjct: 172 PPRPPRAPPCRRR 134
>LOC_Os05g01420:12005.t00044:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 3074 Score = 29.0 bits (57), Expect(2) = 5.3 Identities = 12/29 (41%), Positives = 19/29 (65%) Frame = +1 / +3 Query: 1531 NNAFVSCLQETKLDFIDCRLVAEILGPLL 1617 ++A + C QE+KL +D RL + GP+L Sbjct: 555 SSASIFCCQESKLAVLDQRLQNQSCGPVL 641 Score = 27.2 bits (53), Expect(2) = 5.3 Identities = 10/19 (52%), Positives = 15/19 (78%) Frame = +1 / +1 Query: 1768 ISAVYGPQSETD*IIFIGE 1824 ++ VYGPQS+ D I+F+ E Sbjct: 778 LTNVYGPQSDGDKILFLEE 834
>LOC_Os04g39780:12004.t03545:unspliced-genomic AMP-binding enzyme family protein, expressed| Length = 8685 Score = 29.0 bits (57), Expect(2) = 5.3 Identities = 9/20 (45%), Positives = 13/20 (65%) Frame = -1 / +1 Query: 1792 TEVRRRPKCSIYNH*HTYKW 1733 TE R +C+ ++H*H Y W Sbjct: 4231 TETLRFSRCTCWSH*HIYSW 4290 Score = 28.6 bits (56), Expect(2) = 5.3 Identities = 11/26 (42%), Positives = 17/26 (65%) Frame = -1 / +3 Query: 424 LAGAPLPSRSTPANSSAGGVTFLTTA 347 L+G P+ + +TP S+AG T +T A Sbjct: 7668 LSGCPVAAAATPTRSNAGDATKVTLA 7745
>LOC_Os12g44020:12012.t04068:unspliced-genomic purple acid phosphatase precursor, putative, expressed| Length = 3267 Score = 29.0 bits (57), Expect(2) = 5.6 Identities = 12/31 (38%), Positives = 19/31 (61%) Frame = +3 / +2 Query: 405 GNGAPASTSE*STNSQSHIDPEAPAPGWTKR 497 G+G PA+TS + S + P +P+P T+R Sbjct: 2129 GSGPPATTSWTTRRSWARRSPSSPSPTGTRR 2221 Score = 27.2 bits (53), Expect(2) = 5.6 Identities = 10/34 (29%), Positives = 15/34 (44%) Frame = +1 / +2 Query: 7 ATAGRWVARRSCRKATTDCCCLEQKIHKCEYGLL 108 +T G W R +CR T C + + + LL Sbjct: 146 STGGSWRRRWTCRSTPTSSACRRATMLRSRFSLL 247
>LOC_Os04g23270:12004.t02054:unspliced-genomic transposon protein, putative, CACTA, En/Spm sub-class| Length = 4286 Score = 26.7 bits (52), Expect(2) = 5.6 Identities = 12/33 (36%), Positives = 18/33 (54%) Frame = -2 / +2 Query: 141 RRNTRLVSGSRKKSIFALMDLLLQTAAVRRRLP 43 R R +SG R + F +DL ++ + RRLP Sbjct: 1757 RPRRRRISGVRASAAFPFIDLRSRSLSPSRRLP 1855 Score = 23.5 bits (45), Expect(2) = 5.6 Identities = 10/17 (58%), Positives = 10/17 (58%) Frame = -2 / +1 Query: 57 RRRLPATPPRHPPTSRR 7 R R ATPP H T RR Sbjct: 1960 RLRRRATPPPHATTRRR 2010
>LOC_Os12g24990:12012.t02222:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 5399 Score = 33.1 bits (66), Expect = 6.2 Identities = 14/39 (35%), Positives = 19/39 (48%) Frame = +3 / -1 Query: 1239 LSMCPGNQRLVRSDCMSDCMQEEQSLLLYPVSCCFRLRL 1355 +S CP + R R D + C++ SL SCC R L Sbjct: 851 MSCCPISSRARRPDAKARCLRSSASLACRSCSCCSRNNL 735
>LOC_Os12g24220:12012.t02151:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 5083 Score = 33.1 bits (66), Expect = 6.2 Identities = 14/42 (33%), Positives = 21/42 (50%) Frame = +3 / +2 Query: 222 SHPACPPPMRLTLPDEVVNKNPPNVCAFDDQPAESESSLPPV 347 +H CP PM+ L ++K P CA P + +S PP+ Sbjct: 14 THRRCPLPMQPPLRSTRLSKPSPTPCATPSPPPPALTSTPPL 139
>LOC_Os11g20760:12011.t01845:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 5869 Score = 33.1 bits (66), Expect = 6.2 Identities = 17/47 (36%), Positives = 23/47 (48%) Frame = -3 / +1 Query: 1745 HIQMVAEIVCGVCLISYNQKKSWEAARRIPPPVPSRKEAKIISKRGP 1605 H+ + G C S N K + ARRI V RKE+ I ++GP Sbjct: 364 HLLLNPAATSGSCTKSTNLKGNGLLARRIVDSVAKRKESSIKPRKGP 504
>LOC_Os04g28090:12004.t02508:unspliced-genomic cell division cycle 5-like protein, putative, expressed| Length = 7314 Score = 33.1 bits (66), Expect = 6.2 Identities = 13/42 (30%), Positives = 22/42 (52%) Frame = -3 / +1 Query: 971 FLFHSHDTCSILSRYLLQYDSLHSGASVSTS*CHIVAYVHCY 846 F++ + +L +Y+ Y + S V S CHI A +HC+ Sbjct: 1804 FVYFTEMYSIVLDQYIKYYQHIPSIPLVMFSSCHIAASIHCF 1929
>LOC_Os01g49210:12001.t04361:unspliced-genomic expressed protein| Length = 891 Score = 33.1 bits (66), Expect = 6.2 Identities = 13/23 (56%), Positives = 16/23 (69%) Frame = -3 / -1 Query: 1673 AARRIPPPVPSRKEAKIISKRGP 1605 AARR+PPP PSR+ A +R P Sbjct: 531 AARRLPPPRPSRRRAAAPPRRPP 463
>LOC_Os01g10520:12001.t00926:unspliced-genomic expressed protein| Length = 6514 Score = 33.1 bits (66), Expect = 6.2 Identities = 16/46 (34%), Positives = 20/46 (43%) Frame = +3 / -1 Query: 237 PPPMRLTLPDEVVNKNPPNVCAFDDQPAESESSLPPVAVVRKVTPP 374 PPP+ L LP +NPP +P+E PP RK P Sbjct: 142 PPPLPLCLPCTPFTQNPPTKSEKKHKPSEGSRPSPPPT*WRKRRRP 5
>LOC_Os09g36540:12009.t03130:unspliced-genomic retrotransposon protein, putative, LINE subclass| Length = 8175 Score = 33.1 bits (66), Expect = 6.2 Identities = 17/61 (27%), Positives = 28/61 (45%) Frame = +1 / +2 Query: 1642 DGTGGGILLAASQDFF*L*EIRHTPHTISATICMCANDYKWSISAVYGPQSETD*IIFIG 1821 +GT GG+ A D F + + ++S + W+++ VYGPQ I F+ Sbjct: 5726 EGTRGGLFTAWRSDRFNMSCLHKGVWSLSLCVTNLEGGASWTLTNVYGPQETEQKIQFLE 5905 Query: 1822 E 1824 E Sbjct: 5906 E 5908
>LOC_Os06g14080:12006.t01283:unspliced-genomic ATMAP70-4, putative, expressed| Length = 5684 Score = 33.1 bits (66), Expect = 6.2 Identities = 15/52 (28%), Positives = 25/52 (48%) Frame = +2 / +2 Query: 1589 LLLKFWGLFC**FWLPSGTAQEVGFFLLLPRISSDCRRSDTLRTLSQPPFVC 1744 L L W + +LP+G EVG ++ RR ++R++S P +C Sbjct: 4877 LYLHIWISYSLWIFLPAGAHHEVGLLATTNDSGTNTRRHSSIRSISISPCIC 5032
>LOC_Os04g58730:12004.t05334:unspliced-genomic DNA binding protein, putative, expressed| Length = 4374 Score = 33.1 bits (66), Expect = 6.2 Identities = 11/20 (55%), Positives = 13/20 (65%) Frame = +1 / -1 Query: 10 TAGRWVARRSCRKATTDCCC 69 TA RWV+RR R+ CCC Sbjct: 2109 TAARWVSRRRRRRRRRPCCC 2050
>LOC_Os04g51520:12004.t04629:unspliced-genomic xyloglucan endotransglycosylase/hydrolase protein 8 precursor,| putative, expressed Length = 3187 Score = 33.1 bits (66), Expect = 6.2 Identities = 13/31 (41%), Positives = 18/31 (58%) Frame = -1 / -3 Query: 1306 SSCMQSDMQSERTRRWLPGHMLSNSSRQPRP 1214 ++C + S T W H+ SNSSR+PRP Sbjct: 242 TTCRVAASSSSVTLTWSSPHITSNSSRKPRP 150
>LOC_Os04g10410:12004.t00874:unspliced-genomic amidase, putative, expressed| Length = 4685 Score = 33.1 bits (66), Expect = 6.2 Identities = 15/30 (50%), Positives = 20/30 (66%) Frame = -1 / +2 Query: 1276 ERTRRWLPGHMLSNSSRQPRPSLAAEGRLD 1187 ERTRR +PG + SS Q P++A E +LD Sbjct: 539 ERTRRPIPGKQPAASSTQLPPAMAIERKLD 628
>LOC_Os03g09070:12003.t00762:unspliced-genomic protein binding protein, putative, expressed| Length = 3529 Score = 33.1 bits (66), Expect = 6.2 Identities = 16/51 (31%), Positives = 25/51 (49%) Frame = -1 / -2 Query: 415 APLPSRSTPANSSAGGVTFLTTATGGRLDSDSAGWSSNAHTFGGFLLTTSS 263 APL RS PA + +GG + T + + GW++ + G T+SS Sbjct: 1203 APLLVRSPPAGAGSGGFAGAASTTASGSGTGAPGWTNTSSA*RGRRCTSSS 1051
>LOC_Os02g48094:12002.t005617:unspliced-genomic expressed protein| Length = 2327 Score = 33.1 bits (66), Expect = 6.2 Identities = 13/20 (65%), Positives = 14/20 (70%) Frame = -2 / -3 Query: 66 AAVRRRLPATPPRHPPTSRR 7 AA RRR +TPP HPP RR Sbjct: 2214 AACRRRGASTPPAHPPPPRR 2155
>LOC_Os07g05240:12007.t00407:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 2871 Score = 27.6 bits (54), Expect(3) = 6.9 Identities = 11/30 (36%), Positives = 18/30 (60%) Frame = -1 / -2 Query: 1678 GKQQEESHLLCRPGRKPKLSAKEAPKFQQQ 1589 GK+ EE ++ K KLS K P+F+++ Sbjct: 1982 GKEPEEQNIPLENAMKNKLSPKPKPRFRRR 1893 Score = 24.9 bits (48), Expect(3) = 6.9 Identities = 10/20 (50%), Positives = 11/20 (55%) Frame = -1 / -3 Query: 286 GFLLTTSSGNVNLIGGGHAG 227 G T S G V + GGGH G Sbjct: 1321 GVRRTASRGGVGVRGGGHQG 1262 Score = 23.1 bits (44), Expect(3) = 6.9 Identities = 8/13 (61%), Positives = 8/13 (61%) Frame = -2 / -2 Query: 45 PATPPRHPPTSRR 7 PA PP PP RR Sbjct: 1208 PALPPPRPPPPRR 1170
>LOC_Os01g65530:12001.t05917:unspliced-genomic RNA recognition motif family protein, expressed| Length = 4360 Score = 32.2 bits (64), Expect(2) = 7.2 Identities = 13/21 (61%), Positives = 14/21 (66%) Frame = -2 / +2 Query: 69 TAAVRRRLPATPPRHPPTSRR 7 TA RRR PA PPR T+RR Sbjct: 3464 TATTRRRWPAPPPRSASTTRR 3526 Score = 24.0 bits (46), Expect(2) = 7.2 Identities = 12/31 (38%), Positives = 13/31 (41%) Frame = -1 / +3 Query: 313 WSSNAHTFGGFLLTTSSGNVNLIGGGHAGWL 221 WSS A LL T GN+ GWL Sbjct: 1776 WSSEATNVVSVLLGTKEGNLVC*VVDRVGWL 1868
>LOC_Os09g30090:12009.t02687:unspliced-genomic WD40-like, putative| Length = 1332 Score = 25.8 bits (50), Expect(3) = 7.7 Identities = 11/31 (35%), Positives = 16/31 (51%) Frame = -2 / +2 Query: 1338 SRKQDTKADSAPLACNPTCSQSAPDVGCRDT 1246 SR+ ++A SAP A P C S+ R + Sbjct: 392 SRRATSRAPSAPTAAAPPCRASSSATTARSS 484 Score = 24.9 bits (48), Expect(3) = 7.7 Identities = 11/35 (31%), Positives = 15/35 (42%) Frame = -3 / +2 Query: 1658 PPPVPSRKEAKIISKRGPKISATSLQSIKSSLVSW 1554 PPP PS A S P ++ S + + SW Sbjct: 20 PPPPPSSWPATASSSSRPAMAGRSRPTTRCRATSW 124 Score = 22.6 bits (43), Expect(3) = 7.7 Identities = 7/11 (63%), Positives = 8/11 (72%) Frame = -2 / +3 Query: 36 PPRHPPTSRRI 4 PPR PP RR+ Sbjct: 765 PPRRPPLRRRL 797
>LOC_Os03g24920:12003.t02184:unspliced-genomic ubiquitin-like protein, putative, expressed| Length = 3153 Score = 25.8 bits (50), Expect(2) = 7.7 Identities = 10/21 (47%), Positives = 11/21 (52%) Frame = +1 / +1 Query: 1264 VWCALTACRIACKRSRVCFCI 1326 VWC L RI C VCF + Sbjct: 610 VWCLLWG*RIWCSLLGVCFLL 672 Score = 24.0 bits (46), Expect(2) = 7.7 Identities = 9/21 (42%), Positives = 12/21 (57%) Frame = +2 / +3 Query: 1361 LLAVVALHLMCPWSACFISSH 1423 +LA+ LHL + C I SH Sbjct: 792 VLAIACLHLALVLAGCLILSH 854
>LOC_Os10g01890:12010.t00085:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 3408 Score = 31.8 bits (63), Expect(2) = 7.8 Identities = 11/35 (31%), Positives = 18/35 (51%) Frame = +1 / -2 Query: 1213 RDAAAGCCCLACVPATNVWCALTACRIACKRSRVC 1317 R AA+ CC +C+ + W + CR+A + C Sbjct: 458 RLAASYACCCSCICRSMSWSCVMFCRMASMSASAC 354 Score = 24.0 bits (46), Expect(2) = 7.8 Identities = 13/39 (33%), Positives = 16/39 (41%) Frame = +3 / -2 Query: 390 GVDLEGNGAPASTSE*STNSQSHIDPEAPAPGWTKRFQL 506 GV G A + +N + EAP PGW QL Sbjct: 923 GVGACGRAVGAGATLTKSNCGP*LQGEAPGPGWFDGNQL 807
>LOC_Os08g01590:12008.t00058:unspliced-genomic expressed protein| Length = 1747 Score = 27.6 bits (54), Expect(2) = 8.1 Identities = 12/38 (31%), Positives = 18/38 (47%) Frame = +3 / +1 Query: 369 PPAEEFAGVDLEGNGAPASTSE*STNSQSHIDPEAPAP 482 PP + G+P+S+S T+S S P +P P Sbjct: 493 PPPSAASSTASPTTGSPSSSSRPPTSSPSSSSPSSPPP 606 Score = 22.1 bits (42), Expect(2) = 8.1 Identities = 11/41 (26%), Positives = 15/41 (36%) Frame = +3 / +1 Query: 222 SHPACPPPMRLTLPDEVVNKNPPNVCAFDDQPAESESSLPP 344 S PA PPP P + +P + + S PP Sbjct: 361 SSPASPPPSSSRSPSSSSSTSPSPTPSSPTSTPTTPPSTPP 483
>LOC_Os01g12381:12001.t006914:unspliced-genomic esterase precursor, putative, expressed| Length = 1439 Score = 25.8 bits (50), Expect(2) = 8.2 Identities = 13/28 (46%), Positives = 13/28 (46%) Frame = -1 / -1 Query: 1291 SDMQSERTRRWLPGHMLSNSSRQPRPSL 1208 SD R RRW L SR RPSL Sbjct: 347 SDGYPIRRRRWAAAATLPMRSRMSRPSL 264 Score = 24.0 bits (46), Expect(2) = 8.2 Identities = 8/16 (50%), Positives = 11/16 (68%) Frame = -2 / -1 Query: 1446 GNMGQPRPCEEMKQAD 1399 G G+PRP ++QAD Sbjct: 419 GTNGRPRPAAAVRQAD 372
>LOC_Os10g14070:12010.t01129:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 1503 Score = 32.7 bits (65), Expect = 8.6 Identities = 11/23 (47%), Positives = 16/23 (69%) Frame = -3 / +2 Query: 386 EFFCRRRDLPDDSYGRETRFRFR 318 +FF RR D+P D++ TR RF+ Sbjct: 509 KFFSRRADIPSDNHATSTRSRFK 577
>LOC_Os07g45920:12007.t04229:unspliced-genomic retrotransposon protein, putative, unclassified, expressed| Length = 4687 Score = 32.7 bits (65), Expect = 8.6 Identities = 16/46 (34%), Positives = 22/46 (47%) Frame = -3 / +1 Query: 350 SYGRETRFRFRRLVIKRTHIRRVLVDNLVGQCQSHRRRACRMARQS 213 S+G + RR + +R RV V G+C HRR CR +S Sbjct: 1060 SFGGASGGVIRRRIRRRGSTERVAVPGTSGRCWRHRRWVCRRRGRS 1197
>LOC_Os06g36500:12006.t03346:unspliced-genomic retrotransposon protein, putative, Ty1-copia subclass| Length = 6083 Score = 32.7 bits (65), Expect = 8.6 Identities = 12/36 (33%), Positives = 18/36 (50%) Frame = -3 / -1 Query: 1712 VCLISYNQKKSWEAARRIPPPVPSRKEAKIISKRGP 1605 +C + N + WE+ RR PP P + I K+ P Sbjct: 557 LCTRTRNTESDWESTRRREPPPPPIRSISSIEKQSP 450
>LOC_Os05g43950:12005.t03884:unspliced-genomic expressed protein| Length = 4122 Score = 32.7 bits (65), Expect = 8.6 Identities = 14/36 (38%), Positives = 18/36 (50%) Frame = +3 / +1 Query: 324 SESSLPPVAVVRKVTPPAEEFAGVDLEGNGAPASTS 431 S +S PP TPP+ G+GAP+STS Sbjct: 241 SPASSPPARRAAPPTPPSSRSRSTTCSGSGAPSSTS 348
>LOC_Os12g39260:12012.t03606:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 5014 Score = 32.7 bits (65), Expect = 8.6 Identities = 12/35 (34%), Positives = 19/35 (54%) Frame = +1 / -3 Query: 1213 RDAAAGCCCLACVPATNVWCALTACRIACKRSRVC 1317 R AA+ CC +C+ + W + CR+A + VC Sbjct: 398 RLAASYACCCSCI*RSMSWSRVMFCRMASMSASVC 294
>LOC_Os12g24500:12012.t02176:unspliced-genomic expressed protein| Length = 4677 Score = 32.7 bits (65), Expect = 8.6 Identities = 11/23 (47%), Positives = 16/23 (69%) Frame = -2 / +1 Query: 1227 GSRVPLWRLRGVWMRVVWAW*AG 1159 G+ +P WR+R V + +WAW AG Sbjct: 658 GAVLPRWRVRAVRVLAMWAWWAG 726
>LOC_Os12g10630:12012.t00941:unspliced-genomic ZF-HD homeobox protein, putative, expressed| Length = 3221 Score = 32.7 bits (65), Expect = 8.6 Identities = 13/19 (68%), Positives = 14/19 (73%) Frame = -2 / +3 Query: 63 AVRRRLPATPPRHPPTSRR 7 A RRR PA PP PPT+RR Sbjct: 1548 ARRRRRPAAPPPPPPTARR 1604
>LOC_Os11g45420:12011.t04069:unspliced-genomic retrotransposon protein, putative, LINE subclass| Length = 2867 Score = 32.7 bits (65), Expect = 8.6 Identities = 15/57 (26%), Positives = 30/57 (52%) Frame = +1 / +2 Query: 1654 GGILLAASQDFF*L*EIRHTPHTISATICMCANDYKWSISAVYGPQSETD*IIFIGE 1824 GG+LLA + + ++ +++A + ++ W +S +YG Q E D + F+ E Sbjct: 884 GGVLLAWRTTVWSISDVHLADFSLTALVRHLSDVAPWWLSIIYGTQEEPDKLRFLDE 1054
>LOC_Os11g05130:12011.t00406:unspliced-genomic PHD-finger family protein, expressed| Length = 8464 Score = 32.7 bits (65), Expect = 8.6 Identities = 10/27 (37%), Positives = 17/27 (62%) Frame = +2 / +1 Query: 1349 EIRFLLAVVALHLMCPWSACFISSHGL 1429 ++ LL++ +LHL+C W F+ H L Sbjct: 4789 QVEILLSICSLHLLCSWKVIFVV*HFL 4869
>LOC_Os07g14380:12007.t01302:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 1843 Score = 32.7 bits (65), Expect = 8.6 Identities = 12/35 (34%), Positives = 19/35 (54%) Frame = +1 / -3 Query: 1213 RDAAAGCCCLACVPATNVWCALTACRIACKRSRVC 1317 R AA+ CC +C+ + W + CR+A + VC Sbjct: 464 RLAASYACCCSCIWRSMSWSRVMFCRMASMSASVC 360
>LOC_Os07g14060:12007.t01270:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 2774 Score = 32.7 bits (65), Expect = 8.6 Identities = 12/35 (34%), Positives = 18/35 (51%) Frame = +1 / -1 Query: 1213 RDAAAGCCCLACVPATNVWCALTACRIACKRSRVC 1317 R AA+ CC +C+ + W + CRIA + C Sbjct: 383 RLAASYACCCSCIWRSMSWSRVMLCRIASMSASAC 279
>LOC_Os05g40950:12005.t03634:unspliced-genomic expressed protein| Length = 1042 Score = 32.7 bits (65), Expect = 8.6 Identities = 12/16 (75%), Positives = 12/16 (75%) Frame = -2 / -1 Query: 57 RRRLPATPPRHPPTSR 10 RRR PA PPR PP SR Sbjct: 277 RRRRPAAPPRRPPPSR 230
>LOC_Os03g49110:12003.t04261:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 1740 Score = 32.7 bits (65), Expect = 8.6 Identities = 12/35 (34%), Positives = 19/35 (54%) Frame = +1 / -2 Query: 1213 RDAAAGCCCLACVPATNVWCALTACRIACKRSRVC 1317 R AA+ CC +C+ + W + CR+A + VC Sbjct: 464 RLAASYACCCSCIWRSMSWSRVMFCRMASMSASVC 360
>LOC_Os03g04660:12003.t00343:unspliced-genomic cytochrome P450 86A1, putative, expressed| Length = 2135 Score = 32.7 bits (65), Expect = 8.6 Identities = 13/20 (65%), Positives = 14/20 (70%) Frame = -2 / -3 Query: 69 TAAVRRRLPATPPRHPPTSR 10 TA+ RRR PA PPR TSR Sbjct: 1518 TASARRRAPAPPPRRSSTSR 1459
>LOC_Os02g46760:12002.t04263:unspliced-genomic OsMKK10-1 - putative MAPKK based on amino acid sequence homology| Length = 1023 Score = 32.7 bits (65), Expect = 8.6 Identities = 14/21 (66%), Positives = 14/21 (66%) Frame = -2 / -3 Query: 69 TAAVRRRLPATPPRHPPTSRR 7 TAA RR PATP R PP RR Sbjct: 862 TAARSRRTPATPRRAPPARRR 800
>LOC_Os02g26660:12002.t02360:unspliced-genomic oligoribonuclease, mitochondrial precursor, putative, expressed| Length = 5379 Score = 32.7 bits (65), Expect = 8.6 Identities = 15/42 (35%), Positives = 26/42 (61%) Frame = +1 / -3 Query: 499 FSWQLWTFNLAVPHDSALAFRSKYQSICFSFINLRLLHA*FS 624 +SWQL+++ LA+ H+S + R + +++ FS N L FS Sbjct: 4327 YSWQLFSYTLALFHNSCVLSRLQLRNLKFSNCNDPTLSLIFS 4202
>LOC_Os01g37710:12001.t03311:unspliced-genomic conserved hypothetical protein| Length = 3749 Score = 32.7 bits (65), Expect = 8.6 Identities = 15/48 (31%), Positives = 22/48 (45%) Frame = +1 / +3 Query: 1645 GTGGGILLAASQDFF*L*EIRHTPHTISATICMCANDYKWSISAVYGP 1788 G GG+LL + F + I I +C +KW++ VYGP Sbjct: 2631 GCSGGMLLGINLQTFDIGSIDEGDFYIKFHLCNKIEKFKWALVLVYGP 2774
>LOC_Os01g31629:12001.t02745:unspliced-genomic expressed protein| Length = 16456 Score = 32.7 bits (65), Expect = 8.6 Identities = 12/35 (34%), Positives = 19/35 (54%) Frame = +1 / -3 Query: 1213 RDAAAGCCCLACVPATNVWCALTACRIACKRSRVC 1317 R AA+ CC +C+ + W + CR+A + VC Sbjct: 7934 RLAASYACCCSCIWRSMSWSRVMFCRMASMSASVC 7830
>LOC_Os01g28882:12001.t02582:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 8092 Score = 32.7 bits (65), Expect = 8.6 Identities = 15/48 (31%), Positives = 23/48 (47%) Frame = +1 / +3 Query: 1645 GTGGGILLAASQDFF*L*EIRHTPHTISATICMCANDYKWSISAVYGP 1788 G GG+LL + F + I I +C + +KW++ VYGP Sbjct: 6981 GRSGGMLLRINLQTFDIGSIDEGDFYIKFHLCNKIDKFKWALVLVYGP 7124
>LOC_Os05g50380:12005.t04470:unspliced-genomic glucose-1-phosphate adenylyltransferase large subunit, chloroplast| precursor, putative, expressed Length = 5484 Score = 29.9 bits (59), Expect(2) = 8.7 Identities = 18/56 (32%), Positives = 25/56 (44%) Frame = +3 / +3 Query: 405 GNGAPASTSE*STNSQSHIDPEAPAPGWTKRFQLATLDVQPRRPA*LCVSIPVQIS 572 G+G AS+ S+ S H + P P + + TL R+P L S P IS Sbjct: 156 GSGNHASSPLLSSPSSLHSNAPRPPPLYKGELHITTLPTPSRQPPHLSSSFPGAIS 323 Score = 26.3 bits (51), Expect(2) = 8.7 Identities = 13/38 (34%), Positives = 18/38 (47%) Frame = +3 / +1 Query: 1314 LLLYPVSCCFRLRLGSYXXXXXFI*CAPGPLASSLHMA 1427 LLL + C R LG + +*C GPL + + A Sbjct: 4039 LLLLFIGICLR*LLGRHWNDQIVL*CKHGPLRAGIWSA 4152
>LOC_Os02g13710:12002.t01167:unspliced-genomic transcriptional factor TINY, putative, expressed| Length = 1091 Score = 27.6 bits (54), Expect(2) = 9.3 Identities = 12/38 (31%), Positives = 17/38 (44%) Frame = -2 / -3 Query: 1467 EPWGSNTGNMGQPRPCEEMKQADQGHIK*RATTASRNL 1354 EP G + P E K GH+K + +SRN+ Sbjct: 1020 EPLGKREDKFRRQEPQTEQKGKATGHLKRKGKKSSRNI 907 Score = 26.3 bits (51), Expect(2) = 9.3 Identities = 9/13 (69%), Positives = 9/13 (69%) Frame = -2 / -2 Query: 45 PATPPRHPPTSRR 7 P PPR PP SRR Sbjct: 658 PPPPPRRPPRSRR 620
>LOC_Os12g41090:12012.t03786:unspliced-genomic CBL-interacting serine/threonine-protein kinase 15, putative,| expressed Length = 1519 Score = 26.3 bits (51), Expect(3) = 9.6 Identities = 11/20 (55%), Positives = 12/20 (60%) Frame = -2 / -1 Query: 66 AAVRRRLPATPPRHPPTSRR 7 +A R A PP PPTSRR Sbjct: 1279 SARRATAAAPPPTSPPTSRR 1220 Score = 24.9 bits (48), Expect(3) = 9.6 Identities = 7/14 (50%), Positives = 11/14 (78%) Frame = -3 / -1 Query: 866 VAYVHCYFSMLYLQ 825 +A++HCY L+LQ Sbjct: 1492 LAFIHCYIIQLHLQ 1451 Score = 22.1 bits (42), Expect(3) = 9.6 Identities = 9/21 (42%), Positives = 12/21 (57%) Frame = -1 / -2 Query: 445 LVDYSEVLAGAPLPSRSTPAN 383 L +Y L +PLP +TP N Sbjct: 1470 LYNYISKLQKSPLPFTNTPLN 1408 Database: tigr.seq.out Posted date: Jul 20, 2007 8:58 AM Number of letters in database: 166,841,660 Number of sequences in database: 56,278 Lambda K H 0.318 0.134 0.401 Matrix: BLOSUM62 Number of Sequences: 56278 Number of Hits to DB: 811,740,716 Number of extensions: 14310302 Number of successful extensions: 74127 Number of sequences better than 10.0: 133 Length of query: 612 Length of database: 55,613,886 Length adjustment: 51 Effective length of query: 561 Effective length of database: 52,743,708 Effective search space: 29589220188 Effective search space used: 29589220188 Neighboring words threshold: 13 Window for multiple hits: 40 X1: 16 ( 7.3 bits)
