ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf140e21
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1Q5RF16:BCDO2_PONPY Beta,beta-carotene 9',10'-dioxygenase - Pongo... 40 0.025
2Q9BYV7:BCDO2_HUMAN Beta,beta-carotene 9',10'-dioxygenase - Homo ... 37 0.21
3Q6NZN0:RBM26_MOUSE RNA-binding protein 26 - Mus musculus (Mouse) 37 0.36
4P07875:VG38_BPT2 Receptor recognizing protein - Bacteriophage T2 36 0.62
5Q2T9I5:RBM26_XENLA RNA-binding protein 26 - Xenopus laevis (Afri... 35 0.81
6Q5T8P6:RBM26_HUMAN RNA-binding protein 26 - Homo sapiens (Human) 35 1.1
7Q8HXG8:BCDO2_MACFA Beta,beta-carotene 9',10'-dioxygenase - Macac... 35 1.1
8Q3V4Z0:YCF2_ACOCL Protein ycf2 - Acorus calamus (Sweet flag) 34 2.4
9P79760:CP1A4_CHICK Cytochrome P450 1A4 - Gallus gallus (Chicken) 33 5.2
10Q8N8U3:ZCHC5_HUMAN Zinc finger CCHC domain-containing protein 5 ... 32 6.8
11O88839:ADA15_MOUSE ADAM 15 precursor - Mus musculus (Mouse) 32 8.9
12Q4P782:BST1_USTMA GPI inositol-deacylase - Ustilago maydis (Smut... 32 8.9

>Q5RF16:BCDO2_PONPY Beta,beta-carotene 9',10'-dioxygenase - Pongo pygmaeus (Orangutan)|
          Length = 557
 Score = 40.4 bits (93), Expect = 0.025
 Identities = 28/91 (30%), Positives = 47/91 (51%), Gaps = 4/91 (4%)
 Frame = +2

Query: 845  SSSGRKRQCGTNWCSHLHLNEEN-HTEGGILTIWSRYHDYETRKSH---GAGYSNHLIQL 1012
            S+S  K+  GT WCSH +L++E+   EGGI      Y  +  +K H   G G+  HL+  
Sbjct: 411  SASAVKQADGTIWCSHENLHQEDLEKEGGIEFPQIYYDQFSGKKYHFFYGCGF-RHLVGG 469

Query: 1013 IGQVVIDKIQEHISFESEDTMYMPADCLLLP 1105
               + +D + + +    ED  Y P++ + +P
Sbjct: 470  DSLIKVDVVNKTLKVWREDGFY-PSEPVFVP 499



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>Q9BYV7:BCDO2_HUMAN Beta,beta-carotene 9',10'-dioxygenase - Homo sapiens (Human)|
          Length = 556

 Score = 37.4 bits (85), Expect = 0.21
 Identities = 24/89 (26%), Positives = 45/89 (50%), Gaps = 2/89 (2%)
 Frame = +2

Query: 845  SSSGRKRQCGTNWCSHLHLNEENHTEGGILTIWSRYHDYETRKSHGAGYSNHLIQLIGQ- 1021
            S+S  K+  GT WCSH +L++E+  + G +     Y+D  + K +   Y      L+G  
Sbjct: 411  SASAVKQADGTIWCSHENLHQEDLEKEGGIEFPQIYYDRFSGKKYHFFYGCGFRHLVGDS 470

Query: 1022 -VVIDKIQEHISFESEDTMYMPADCLLLP 1105
             + +D + + +    ED  Y P++ + +P
Sbjct: 471  LIKVDVVNKTLKVWREDGFY-PSEPVFVP 498



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>Q6NZN0:RBM26_MOUSE RNA-binding protein 26 - Mus musculus (Mouse)|
          Length = 1012

 Score = 36.6 bits (83), Expect = 0.36
 Identities = 28/90 (31%), Positives = 36/90 (40%)
 Frame = +3

Query: 237 PPPMRLTLPDEVVNKNPPNVCAFDDQPAESESSLPPVAVVRKVTPPAEEFAGVDLEGNGA 416
           PPP  L  P  ++   P N+      P     SLPPV       PP +  +G+D   N A
Sbjct: 341 PPPPGLPPPPPILTPPPVNLRPPVPPPGPLPPSLPPVTGPPPPLPPLQP-SGMDAPPNSA 399

Query: 417 PASTSE*STNSQSHIDPEAPAPGWTKRFQL 506
            +S     T    H  P AP   +T  F L
Sbjct: 400 TSSVPTVVTTGIHHQPPPAPPSLFTAVFVL 429



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>P07875:VG38_BPT2 Receptor recognizing protein - Bacteriophage T2|
          Length = 262

 Score = 35.8 bits (81), Expect = 0.62
 Identities = 32/98 (32%), Positives = 41/98 (41%), Gaps = 6/98 (6%)
 Frame = -1

Query: 418 GAPLPSRSTPANSSAGGVTFLTTATGGRLDSDSAGWSSNAHT----FGGFLLTTSSGNVN 251
           GA     S P N S GG        GG++ SDS    SNA       GG      +GN  
Sbjct: 159 GAASLKNSYPTNGSCGGGGGRPFGVGGKIGSDSILSGSNASLTDAGTGGTTFQYGAGNGG 218

Query: 250 LIG-GGHAGWLVNQSIKL*PINGIHLS-SAADWPSVGT 143
            +G GG  GW  N         G  ++ +A +W +VGT
Sbjct: 219 NVGAGGGRGWGKNVYTSEGGAAGAAVTGNAPNWQNVGT 256



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>Q2T9I5:RBM26_XENLA RNA-binding protein 26 - Xenopus laevis (African clawed frog)|
          Length = 1059

 Score = 35.4 bits (80), Expect = 0.81
 Identities = 29/84 (34%), Positives = 33/84 (39%)
 Frame = +3

Query: 228 PACPPPMRLTLPDEVVNKNPPNVCAFDDQPAESESSLPPVAVVRKVTPPAEEFAGVDLEG 407
           P  PPP  L  P   VN  PP V      P     SLPPV       PP +  AG+D   
Sbjct: 383 PGLPPPPSLLTPPP-VNLQPPPV----PPPGPLPPSLPPVTGPPPPLPPLQP-AGMDAPP 436

Query: 408 NGAPASTSE*STNSQSHIDPEAPA 479
           N A +S     T    H  P  P+
Sbjct: 437 NSATSSVPTVVTTGILHPPPVPPS 460



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>Q5T8P6:RBM26_HUMAN RNA-binding protein 26 - Homo sapiens (Human)|
          Length = 1007

 Score = 35.0 bits (79), Expect = 1.1
 Identities = 25/80 (31%), Positives = 32/80 (40%)
 Frame = +3

Query: 237 PPPMRLTLPDEVVNKNPPNVCAFDDQPAESESSLPPVAVVRKVTPPAEEFAGVDLEGNGA 416
           PPP  L  P  ++   P N+      P     SLPPV       PP +  +G+D   N A
Sbjct: 341 PPPPGLPPPPPILTPPPVNLRPPVPPPGPLPPSLPPVTGPPPPLPPLQP-SGMDAPPNSA 399

Query: 417 PASTSE*STNSQSHIDPEAP 476
            +S     T    H  P AP
Sbjct: 400 TSSVPTVVTTGIHHQPPPAP 419



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>Q8HXG8:BCDO2_MACFA Beta,beta-carotene 9',10'-dioxygenase - Macaca fascicularis (Crab|
            eating macaque) (Cynomolgus monkey)
          Length = 556

 Score = 35.0 bits (79), Expect = 1.1
 Identities = 23/89 (25%), Positives = 44/89 (49%), Gaps = 2/89 (2%)
 Frame = +2

Query: 845  SSSGRKRQCGTNWCSHLHLNEENHTEGGILTIWSRYHDYETRKSHGAGYSNHLIQLIGQ- 1021
            S+S  K+  GT WCSH +L++E+  + G +     Y+   + K +   Y      L+G  
Sbjct: 411  SASAVKQADGTIWCSHENLHQEDLEKEGGIEFPQIYYGQFSGKKYRFFYGCGFRHLVGDS 470

Query: 1022 -VVIDKIQEHISFESEDTMYMPADCLLLP 1105
             + +D + + +    ED  Y P++ + +P
Sbjct: 471  LIKVDVVNKTLKVWREDGFY-PSEPVFVP 498



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>Q3V4Z0:YCF2_ACOCL Protein ycf2 - Acorus calamus (Sweet flag)|
          Length = 2076

 Score = 33.9 bits (76), Expect = 2.4
 Identities = 21/49 (42%), Positives = 29/49 (59%), Gaps = 2/49 (4%)
 Frame = +2

Query: 893  LHLNEENHTEGGILT--IWSRYHDYETRKSHGAGYSNHLIQLIGQVVID 1033
            L+LNE N+   G+LT  + S Y D ET ++     S HL QL+  V+ID
Sbjct: 1569 LYLNESNYLSLGLLTNFLSSLYGDCETTRNILVFASTHLPQLVDPVLID 1617



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>P79760:CP1A4_CHICK Cytochrome P450 1A4 - Gallus gallus (Chicken)|
          Length = 530

 Score = 32.7 bits (73), Expect = 5.2
 Identities = 29/109 (26%), Positives = 47/109 (43%), Gaps = 15/109 (13%)
 Frame = -3

Query: 428 STSWGSIAFKINPGEFFCRRRDLPDDSYG--RETRFRFRRLVIK----------RTHIRR 285
           +T +G +A   NP +F    R LP+ +    ++   RF   V K          + HIR 
Sbjct: 232 NTEFGDVAAAGNPADFIPLLRYLPNRAMAAFKDVNARFSAFVQKIVQNHYSTFDKEHIRD 291

Query: 284 VLVDNLVGQCQSHRRR---ACRMARQSINQIITNKRNTSIERGRLAVSW 147
           V  D+L+G CQ  R       + + +SI  I+ +      +    A+SW
Sbjct: 292 V-TDSLIGHCQEKRTGEDVRVQPSDESIISIVNDLFGAGFDTVTTALSW 339



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>Q8N8U3:ZCHC5_HUMAN Zinc finger CCHC domain-containing protein 5 - Homo sapiens (Human)|
          Length = 475

 Score = 32.3 bits (72), Expect = 6.8
 Identities = 22/69 (31%), Positives = 30/69 (43%)
 Frame = +3

Query: 228 PACPPPMRLTLPDEVVNKNPPNVCAFDDQPAESESSLPPVAVVRKVTPPAEEFAGVDLEG 407
           P    P +   P +++   PP      + PA  ES  PP     +  P A E   V LEG
Sbjct: 80  PEFKEPQKPPEPQDLLPWEPPAAWELQEAPAAPESLAPPATRESQKPPMAHEIPTV-LEG 138

Query: 408 NGAPASTSE 434
            G PA+T +
Sbjct: 139 QG-PANTQD 146



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>O88839:ADA15_MOUSE ADAM 15 precursor - Mus musculus (Mouse)|
          Length = 864

 Score = 32.0 bits (71), Expect = 8.9
 Identities = 18/49 (36%), Positives = 21/49 (42%)
 Frame = +3

Query: 228 PACPPPMRLTLPDEVVNKNPPNVCAFDDQPAESESSLPPVAVVRKVTPP 374
           P  PPP R  LP     ++PP      D P   + SLP V   R   PP
Sbjct: 813 PTKPPPPRKPLPANPQGQHPPG-----DLPGPGDGSLPLVVPSRPAPPP 856



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>Q4P782:BST1_USTMA GPI inositol-deacylase - Ustilago maydis (Smut fungus)|
          Length = 1520

 Score = 32.0 bits (71), Expect = 8.9
 Identities = 18/57 (31%), Positives = 31/57 (54%)
 Frame = +2

Query: 1250 SRQPTSGAL*LHVGLHARGAESAFVSCFLLLPFEIRFLLAVVALHLMCPWSACFISS 1420
            +R PTS  + + +GLH   + +  + CFLL+ +    LL +VA+     WS   I++
Sbjct: 879  ARGPTSSLIGMVLGLHNHASSAGLIPCFLLVSYAT--LLVIVAI---IQWSFSLIAA 930


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 336,355,039
Number of extensions: 7662169
Number of successful extensions: 20428
Number of sequences better than 10.0: 12
Number of HSP's gapped: 20384
Number of HSP's successfully gapped: 12
Length of query: 612
Length of database: 100,686,439
Length adjustment: 119
Effective length of query: 493
Effective length of database: 68,045,334
Effective search space: 33546349662
Effective search space used: 33546349662
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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