| Clone Name | FLbaf143b20 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AF093630:Os10g0465800 | 317 | 8e-87 | 2 | AK120267:Os03g0141000 | 163 | 1e-40 | 3 | AK104044: | 162 | 3e-40 | 4 | AK059120: | 162 | 3e-40 | 5 | AY037871: | 30 | 2.4 | 6 | AK119834:Os08g0561800 | 29 | 4.2 | 7 | Os06g0544100:Os06g0544100 | 28 | 9.3 |
|---|
>AF093630:Os10g0465800 | Length = 164 Score = 317 bits (811), Expect = 8e-87 Identities = 150/164 (91%), Positives = 157/164 (95%) Frame = +3 Query: 93 MPAGHGLRSRTRDLFARPFRKKGYIALTTYLRTYKVGEHVDVKVNGAVHKGMPHKFYHGR 272 MPAGHGLR+RTRDLFARPFRKKGYI LTTYLRTYK+GEHVDVKVNGAVHKGMPHKFYHGR Sbjct: 1 MPAGHGLRARTRDLFARPFRKKGYIPLTTYLRTYKIGEHVDVKVNGAVHKGMPHKFYHGR 60 Query: 273 TGRVWNVTKRAIGVEINKQVGNRIIKKRIHVRVEHVQPSRCNEEFLQRKLNNDKLKAEAK 452 TGRVWNVTKRAIGVEINKQVGNRII+KRIHVRVEHVQPSRC EEF RK+ ND+LKA+AK Sbjct: 61 TGRVWNVTKRAIGVEINKQVGNRIIRKRIHVRVEHVQPSRCTEEFRLRKIKNDQLKADAK 120 Query: 453 ARGEVISTKRQPAGPKPGFMVEGTTIETVTPIPYDVVNDLKGGY 584 ARGEVISTKRQP GPKPGFMVEG T+ETVTPIPYDVVNDLKGGY Sbjct: 121 ARGEVISTKRQPQGPKPGFMVEGATLETVTPIPYDVVNDLKGGY 164
>AK120267:Os03g0141000 | Length = 80 Score = 163 bits (412), Expect = 1e-40 Identities = 75/80 (93%), Positives = 79/80 (98%) Frame = +3 Query: 93 MPAGHGLRSRTRDLFARPFRKKGYIALTTYLRTYKVGEHVDVKVNGAVHKGMPHKFYHGR 272 MPAGHGLR+RTRDLFARPFRKKGYI LTTYLRTYK+G++VDVKVNGAVHKGMPHKFYHGR Sbjct: 1 MPAGHGLRARTRDLFARPFRKKGYIPLTTYLRTYKIGDYVDVKVNGAVHKGMPHKFYHGR 60 Query: 273 TGRVWNVTKRAIGVEINKQV 332 TGRVWNVTKRAIGVEINKQV Sbjct: 61 TGRVWNVTKRAIGVEINKQV 80
>AK104044: | Length = 160 Score = 162 bits (409), Expect = 3e-40 Identities = 84/157 (53%), Positives = 107/157 (68%), Gaps = 2/157 (1%) Frame = +3 Query: 93 MPAGHGLRSRTRDLFARPFRKKGYIALTTYLRTYKVGEHVDVKVNGAVHKGMPHKFYHGR 272 M +G R+ TR F+R FRKKG IAL TYLR Y+VG+ VD+K NGAV KGMP K YHG+ Sbjct: 1 MGHSYGKRAGTRYAFSRDFRKKGMIALNTYLRQYRVGDIVDIKANGAVQKGMPFKVYHGK 60 Query: 273 TGRVWNVTKRAIGVEINKQVGNRIIKKRIHVRVEHVQPSRCNEEFLQRKLNNDKLKAEAK 452 TG ++NVTK A+GV I KQV +R I+KRI+VR+EH+ SR E+FL+R N + K EAK Sbjct: 61 TGVIYNVTKSAVGVIIYKQVKHRYIEKRINVRIEHISQSRSREDFLKRVKANAEAKREAK 120 Query: 453 ARGEVISTKRQPAGPKPG--FMVEGTTIETVTPIPYD 557 A G V+ KRQP GP+ + TVTP+ Y+ Sbjct: 121 ATGTVVQVKRQPLGPRGAHTLSLSENPPMTVTPLAYE 157
>AK059120: | Length = 160 Score = 162 bits (409), Expect = 3e-40 Identities = 84/157 (53%), Positives = 107/157 (68%), Gaps = 2/157 (1%) Frame = +3 Query: 93 MPAGHGLRSRTRDLFARPFRKKGYIALTTYLRTYKVGEHVDVKVNGAVHKGMPHKFYHGR 272 M +G R+ TR F+R FRKKG IAL TYLR Y+VG+ VD+K NGAV KGMP K YHG+ Sbjct: 1 MGHSYGKRAGTRYAFSRDFRKKGMIALNTYLRQYRVGDIVDIKANGAVQKGMPFKVYHGK 60 Query: 273 TGRVWNVTKRAIGVEINKQVGNRIIKKRIHVRVEHVQPSRCNEEFLQRKLNNDKLKAEAK 452 TG ++NVTK A+GV I KQV +R I+KRI+VR+EH+ SR E+FL+R N + K EAK Sbjct: 61 TGVIYNVTKSAVGVIIYKQVKHRYIEKRINVRIEHISQSRSREDFLKRVKANAEAKREAK 120 Query: 453 ARGEVISTKRQPAGPKPG--FMVEGTTIETVTPIPYD 557 A G V+ KRQP GP+ + TVTP+ Y+ Sbjct: 121 ATGTVVQVKRQPLGPRGAHTLSLSENPPMTVTPLAYE 157
>AY037871: | Length = 688 Score = 29.6 bits (65), Expect = 2.4 Identities = 15/39 (38%), Positives = 19/39 (48%) Frame = -1 Query: 581 TTLEIVDDIVRDGCDCLNGGALHHEPGLGPCWLPLCADD 465 T LEI + GCDC N G LGP L + A++ Sbjct: 517 TLLEITSESHDAGCDCSNSGGAGTRGSLGPFGLLVVAEE 555
>AK119834:Os08g0561800 | Length = 184 Score = 28.9 bits (63), Expect = 4.2 Identities = 15/32 (46%), Positives = 16/32 (50%) Frame = -1 Query: 551 RDGCDCLNGGALHHEPGLGPCWLPLCADDLTT 456 R GC L+GG H GL WLP A TT Sbjct: 135 RGGCWLLSGGWRRHSGGLWRRWLPSVAAATTT 166
>Os06g0544100:Os06g0544100 | Length = 663 Score = 27.7 bits (60), Expect = 9.3 Identities = 14/31 (45%), Positives = 15/31 (48%) Frame = +1 Query: 490 QGPSPGSWWRAPPLRQSHPSRTMSSTISRVV 582 QG PG +WRAP LR S RVV Sbjct: 97 QGAIPGGFWRAPSLRHVDVSGNQLGGALRVV 127 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 16,399,453 Number of extensions: 325477 Number of successful extensions: 943 Number of sequences better than 10.0: 7 Number of HSP's gapped: 942 Number of HSP's successfully gapped: 7 Length of query: 261 Length of database: 15,399,855 Length adjustment: 99 Effective length of query: 162 Effective length of database: 11,435,796 Effective search space: 1852598952 Effective search space used: 1852598952 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)