ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf143b20
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1AF093630:Os10g0465800 317 8e-87
2AK120267:Os03g0141000 163 1e-40
3AK104044: 162 3e-40
4AK059120: 162 3e-40
5AY037871: 30 2.4
6AK119834:Os08g0561800 29 4.2
7Os06g0544100:Os06g0544100 28 9.3

>AF093630:Os10g0465800 |
          Length = 164
 Score =  317 bits (811), Expect = 8e-87
 Identities = 150/164 (91%), Positives = 157/164 (95%)
 Frame = +3

Query: 93  MPAGHGLRSRTRDLFARPFRKKGYIALTTYLRTYKVGEHVDVKVNGAVHKGMPHKFYHGR 272
           MPAGHGLR+RTRDLFARPFRKKGYI LTTYLRTYK+GEHVDVKVNGAVHKGMPHKFYHGR
Sbjct: 1   MPAGHGLRARTRDLFARPFRKKGYIPLTTYLRTYKIGEHVDVKVNGAVHKGMPHKFYHGR 60

Query: 273 TGRVWNVTKRAIGVEINKQVGNRIIKKRIHVRVEHVQPSRCNEEFLQRKLNNDKLKAEAK 452
           TGRVWNVTKRAIGVEINKQVGNRII+KRIHVRVEHVQPSRC EEF  RK+ ND+LKA+AK
Sbjct: 61  TGRVWNVTKRAIGVEINKQVGNRIIRKRIHVRVEHVQPSRCTEEFRLRKIKNDQLKADAK 120

Query: 453 ARGEVISTKRQPAGPKPGFMVEGTTIETVTPIPYDVVNDLKGGY 584
           ARGEVISTKRQP GPKPGFMVEG T+ETVTPIPYDVVNDLKGGY
Sbjct: 121 ARGEVISTKRQPQGPKPGFMVEGATLETVTPIPYDVVNDLKGGY 164



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>AK120267:Os03g0141000 |
          Length = 80

 Score =  163 bits (412), Expect = 1e-40
 Identities = 75/80 (93%), Positives = 79/80 (98%)
 Frame = +3

Query: 93  MPAGHGLRSRTRDLFARPFRKKGYIALTTYLRTYKVGEHVDVKVNGAVHKGMPHKFYHGR 272
           MPAGHGLR+RTRDLFARPFRKKGYI LTTYLRTYK+G++VDVKVNGAVHKGMPHKFYHGR
Sbjct: 1   MPAGHGLRARTRDLFARPFRKKGYIPLTTYLRTYKIGDYVDVKVNGAVHKGMPHKFYHGR 60

Query: 273 TGRVWNVTKRAIGVEINKQV 332
           TGRVWNVTKRAIGVEINKQV
Sbjct: 61  TGRVWNVTKRAIGVEINKQV 80



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>AK104044: |
          Length = 160

 Score =  162 bits (409), Expect = 3e-40
 Identities = 84/157 (53%), Positives = 107/157 (68%), Gaps = 2/157 (1%)
 Frame = +3

Query: 93  MPAGHGLRSRTRDLFARPFRKKGYIALTTYLRTYKVGEHVDVKVNGAVHKGMPHKFYHGR 272
           M   +G R+ TR  F+R FRKKG IAL TYLR Y+VG+ VD+K NGAV KGMP K YHG+
Sbjct: 1   MGHSYGKRAGTRYAFSRDFRKKGMIALNTYLRQYRVGDIVDIKANGAVQKGMPFKVYHGK 60

Query: 273 TGRVWNVTKRAIGVEINKQVGNRIIKKRIHVRVEHVQPSRCNEEFLQRKLNNDKLKAEAK 452
           TG ++NVTK A+GV I KQV +R I+KRI+VR+EH+  SR  E+FL+R   N + K EAK
Sbjct: 61  TGVIYNVTKSAVGVIIYKQVKHRYIEKRINVRIEHISQSRSREDFLKRVKANAEAKREAK 120

Query: 453 ARGEVISTKRQPAGPKPG--FMVEGTTIETVTPIPYD 557
           A G V+  KRQP GP+      +      TVTP+ Y+
Sbjct: 121 ATGTVVQVKRQPLGPRGAHTLSLSENPPMTVTPLAYE 157



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>AK059120: |
          Length = 160

 Score =  162 bits (409), Expect = 3e-40
 Identities = 84/157 (53%), Positives = 107/157 (68%), Gaps = 2/157 (1%)
 Frame = +3

Query: 93  MPAGHGLRSRTRDLFARPFRKKGYIALTTYLRTYKVGEHVDVKVNGAVHKGMPHKFYHGR 272
           M   +G R+ TR  F+R FRKKG IAL TYLR Y+VG+ VD+K NGAV KGMP K YHG+
Sbjct: 1   MGHSYGKRAGTRYAFSRDFRKKGMIALNTYLRQYRVGDIVDIKANGAVQKGMPFKVYHGK 60

Query: 273 TGRVWNVTKRAIGVEINKQVGNRIIKKRIHVRVEHVQPSRCNEEFLQRKLNNDKLKAEAK 452
           TG ++NVTK A+GV I KQV +R I+KRI+VR+EH+  SR  E+FL+R   N + K EAK
Sbjct: 61  TGVIYNVTKSAVGVIIYKQVKHRYIEKRINVRIEHISQSRSREDFLKRVKANAEAKREAK 120

Query: 453 ARGEVISTKRQPAGPKPG--FMVEGTTIETVTPIPYD 557
           A G V+  KRQP GP+      +      TVTP+ Y+
Sbjct: 121 ATGTVVQVKRQPLGPRGAHTLSLSENPPMTVTPLAYE 157



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>AY037871: |
          Length = 688

 Score = 29.6 bits (65), Expect = 2.4
 Identities = 15/39 (38%), Positives = 19/39 (48%)
 Frame = -1

Query: 581 TTLEIVDDIVRDGCDCLNGGALHHEPGLGPCWLPLCADD 465
           T LEI  +    GCDC N G       LGP  L + A++
Sbjct: 517 TLLEITSESHDAGCDCSNSGGAGTRGSLGPFGLLVVAEE 555



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>AK119834:Os08g0561800 |
          Length = 184

 Score = 28.9 bits (63), Expect = 4.2
 Identities = 15/32 (46%), Positives = 16/32 (50%)
 Frame = -1

Query: 551 RDGCDCLNGGALHHEPGLGPCWLPLCADDLTT 456
           R GC  L+GG   H  GL   WLP  A   TT
Sbjct: 135 RGGCWLLSGGWRRHSGGLWRRWLPSVAAATTT 166



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>Os06g0544100:Os06g0544100 |
          Length = 663

 Score = 27.7 bits (60), Expect = 9.3
 Identities = 14/31 (45%), Positives = 15/31 (48%)
 Frame = +1

Query: 490 QGPSPGSWWRAPPLRQSHPSRTMSSTISRVV 582
           QG  PG +WRAP LR    S        RVV
Sbjct: 97  QGAIPGGFWRAPSLRHVDVSGNQLGGALRVV 127


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 16,399,453
Number of extensions: 325477
Number of successful extensions: 943
Number of sequences better than 10.0: 7
Number of HSP's gapped: 942
Number of HSP's successfully gapped: 7
Length of query: 261
Length of database: 15,399,855
Length adjustment: 99
Effective length of query: 162
Effective length of database: 11,435,796
Effective search space: 1852598952
Effective search space used: 1852598952
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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