ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | FLbaf143b20 |
|---|---|
| Clone Library Name | barley_pub |
>Q9FDZ9:RL212_ARATH 60S ribosomal protein L21-2 - Arabidopsis thaliana (Mouse-ear| cress) Length = 164 Score = 299 bits (765), Expect = 9e-81 Identities = 139/164 (84%), Positives = 153/164 (93%) Frame = +3 Query: 93 MPAGHGLRSRTRDLFARPFRKKGYIALTTYLRTYKVGEHVDVKVNGAVHKGMPHKFYHGR 272 MPAGHG+R+RTRDLFARPFRKKGYI L+TYLRT+KVG++VDVKVNGA+HKGMPHKFYHGR Sbjct: 1 MPAGHGVRARTRDLFARPFRKKGYIPLSTYLRTFKVGDYVDVKVNGAIHKGMPHKFYHGR 60 Query: 273 TGRVWNVTKRAIGVEINKQVGNRIIKKRIHVRVEHVQPSRCNEEFLQRKLNNDKLKAEAK 452 TGR+WNVTKRA+GVE+NKQ+GNRII+KRIHVRVEHVQ SRC EEF RK ND LKA+AK Sbjct: 61 TGRIWNVTKRAVGVEVNKQIGNRIIRKRIHVRVEHVQQSRCAEEFKLRKKQNDVLKADAK 120 Query: 453 ARGEVISTKRQPAGPKPGFMVEGTTIETVTPIPYDVVNDLKGGY 584 ARGE ISTKRQP GPKPGFMVEG T+ETVTPIPYDVVNDLKGGY Sbjct: 121 ARGETISTKRQPKGPKPGFMVEGMTLETVTPIPYDVVNDLKGGY 164
>Q43291:RL211_ARATH 60S ribosomal protein L21-1 - Arabidopsis thaliana (Mouse-ear| cress) Length = 164 Score = 297 bits (760), Expect = 4e-80 Identities = 138/164 (84%), Positives = 152/164 (92%) Frame = +3 Query: 93 MPAGHGLRSRTRDLFARPFRKKGYIALTTYLRTYKVGEHVDVKVNGAVHKGMPHKFYHGR 272 MPAGHG+R+RTRDLFARPFRKKGYI L+TYLRT+KVG++VDVKVNGA+HKGMPHKFYHGR Sbjct: 1 MPAGHGVRARTRDLFARPFRKKGYIPLSTYLRTFKVGDYVDVKVNGAIHKGMPHKFYHGR 60 Query: 273 TGRVWNVTKRAIGVEINKQVGNRIIKKRIHVRVEHVQPSRCNEEFLQRKLNNDKLKAEAK 452 TGR+WNVTKRA+GVE+NKQ+GNRII+KRIHVRVEHVQ SRC EEF RK ND+LKA AK Sbjct: 61 TGRIWNVTKRAVGVEVNKQIGNRIIRKRIHVRVEHVQQSRCAEEFKLRKKKNDELKAAAK 120 Query: 453 ARGEVISTKRQPAGPKPGFMVEGTTIETVTPIPYDVVNDLKGGY 584 A GE ISTKRQP GPKPGFMVEG T+ETVTPIPYDVVNDLKGGY Sbjct: 121 ANGETISTKRQPKGPKPGFMVEGMTLETVTPIPYDVVNDLKGGY 164
>O82574:RL21_CYAPA 60S ribosomal protein L21 - Cyanophora paradoxa| Length = 161 Score = 177 bits (450), Expect = 3e-44 Identities = 92/158 (58%), Positives = 115/158 (72%), Gaps = 3/158 (1%) Frame = +3 Query: 93 MPAGHGLRSRTRDLFARPFRKKGYIALTTYLRTYKVGEHVDVKVNGAVHKGMPHKFYHGR 272 MP +G R+RTR LFAR F+ G + L+TYL +K+GE+VDV N AVHKGMP K+YHGR Sbjct: 1 MPHSYGYRARTRALFARAFKTNGPVHLSTYLTNFKIGEYVDVVGNAAVHKGMPFKYYHGR 60 Query: 273 TGRVWNVTKRAIGVEINKQVGNRIIKKRIHVRVEHVQPSRCNEEFLQRKLNNDKLKAEAK 452 TG VWNVTKRAIGVEINK+V +RIIKKRIHVR++HV+ S C + FL+R NDK+K +A Sbjct: 61 TGIVWNVTKRAIGVEINKRVRHRIIKKRIHVRIDHVKKSSCRDSFLKRVKENDKIKHDAH 120 Query: 453 -ARGEVISTKRQPAGPKPGFMV--EGTTIETVTPIPYD 557 A+ V STKR P PK G ++ +G ET IPY+ Sbjct: 121 VAKLPVPSTKRLPVLPKAGAIIKSKGQVPETCHAIPYE 158
>Q02753:RL21A_YEAST 60S ribosomal protein L21-A - Saccharomyces cerevisiae (Baker's| yeast) Length = 160 Score = 177 bits (450), Expect = 3e-44 Identities = 84/157 (53%), Positives = 115/157 (73%), Gaps = 2/157 (1%) Frame = +3 Query: 93 MPAGHGLRSRTRDLFARPFRKKGYIALTTYLRTYKVGEHVDVKVNGAVHKGMPHKFYHGR 272 M HG RSRTR +F R FRK G + L+TYL+ YKVG+ VD+K NG++ KGMPHKFY G+ Sbjct: 1 MGKSHGYRSRTRYMFQRDFRKHGAVHLSTYLKVYKVGDIVDIKANGSIQKGMPHKFYQGK 60 Query: 273 TGRVWNVTKRAIGVEINKQVGNRIIKKRIHVRVEHVQPSRCNEEFLQRKLNNDKLKAEAK 452 TG V+NVTK ++GV INK VGNR ++KR+++RVEH++ S+C +EFL+R N +AEAK Sbjct: 61 TGVVYNVTKSSVGVIINKMVGNRYLEKRLNLRVEHIKHSKCRQEFLERVKANAAKRAEAK 120 Query: 453 ARGEVISTKRQPAGPKPGFMV--EGTTIETVTPIPYD 557 A+G + KRQPA P+ +V EG +T+ P+PY+ Sbjct: 121 AQGVAVQLKRQPAQPRESRIVSTEGNVPQTLAPVPYE 157
>Q12672:RL21B_YEAST 60S ribosomal protein L21-B - Saccharomyces cerevisiae (Baker's| yeast) Length = 160 Score = 176 bits (447), Expect = 7e-44 Identities = 83/157 (52%), Positives = 115/157 (73%), Gaps = 2/157 (1%) Frame = +3 Query: 93 MPAGHGLRSRTRDLFARPFRKKGYIALTTYLRTYKVGEHVDVKVNGAVHKGMPHKFYHGR 272 M HG RSRTR +F R FRK G + ++TYL+ YKVG+ VD+K NG++ KGMPHKFY G+ Sbjct: 1 MGKSHGYRSRTRYMFQRDFRKHGAVHMSTYLKIYKVGDIVDIKANGSIQKGMPHKFYQGK 60 Query: 273 TGRVWNVTKRAIGVEINKQVGNRIIKKRIHVRVEHVQPSRCNEEFLQRKLNNDKLKAEAK 452 TG V+NVTK ++GV INK VGNR ++KR+++RVEH++ S+C +EFL+R N +AEAK Sbjct: 61 TGVVYNVTKSSVGVIINKMVGNRYLEKRLNLRVEHIKHSKCRQEFLERVKANAAKRAEAK 120 Query: 453 ARGEVISTKRQPAGPKPGFMV--EGTTIETVTPIPYD 557 A+G + KRQPA P+ +V EG +T+ P+PY+ Sbjct: 121 AQGVAVQLKRQPAQPRESRIVSTEGNVPQTLAPVPYE 157
>O42706:RL21B_SCHPO 60S ribosomal protein L21-B - Schizosaccharomyces pombe (Fission| yeast) Length = 160 Score = 171 bits (433), Expect = 3e-42 Identities = 83/157 (52%), Positives = 113/157 (71%), Gaps = 2/157 (1%) Frame = +3 Query: 93 MPAGHGLRSRTRDLFARPFRKKGYIALTTYLRTYKVGEHVDVKVNGAVHKGMPHKFYHGR 272 MP +G+R+RTR F R FR+ G I L+TYL+TYKVG+ VD+KVNGAV KGMPHK+YHG+ Sbjct: 1 MPHSYGIRARTRYTFQRGFREHGQIRLSTYLKTYKVGDIVDIKVNGAVQKGMPHKYYHGK 60 Query: 273 TGRVWNVTKRAIGVEINKQVGNRIIKKRIHVRVEHVQPSRCNEEFLQRKLNNDKLKAEAK 452 TG V+NVT+ ++GV I K VGNR ++KR++VR+EHV+ S+C ++FL R N+ + EAK Sbjct: 61 TGVVYNVTQSSVGVLIYKVVGNRYMEKRVNVRIEHVKHSKCRQDFLDRVKANEAKRKEAK 120 Query: 453 ARGEVISTKRQPAGPKPGFMVEGTTIETVT--PIPYD 557 A+G+ + +RQPA P V E VT P+ YD Sbjct: 121 AQGKTVQLRRQPAPPATAHFVSTENNEPVTLHPVAYD 157
>Q9UUC1:RL21A_SCHPO 60S ribosomal protein L21-A - Schizosaccharomyces pombe (Fission| yeast) Length = 160 Score = 171 bits (433), Expect = 3e-42 Identities = 83/157 (52%), Positives = 113/157 (71%), Gaps = 2/157 (1%) Frame = +3 Query: 93 MPAGHGLRSRTRDLFARPFRKKGYIALTTYLRTYKVGEHVDVKVNGAVHKGMPHKFYHGR 272 MP +G+R+RTR F R FR+ G I L+TYL+TYKVG+ VD+KVNGAV KGMPHK+YHG+ Sbjct: 1 MPHSYGIRARTRYTFQRGFREHGQIRLSTYLKTYKVGDIVDIKVNGAVQKGMPHKYYHGK 60 Query: 273 TGRVWNVTKRAIGVEINKQVGNRIIKKRIHVRVEHVQPSRCNEEFLQRKLNNDKLKAEAK 452 TG V+NVT+ ++GV I K VGNR ++KR++VR+EHV+ S+C ++FL R N+ + EAK Sbjct: 61 TGVVYNVTQSSVGVLIYKVVGNRYMEKRVNVRIEHVKHSKCRQDFLDRVKANEAKRKEAK 120 Query: 453 ARGEVISTKRQPAGPKPGFMVEGTTIETVT--PIPYD 557 A+G+ + +RQPA P V E VT P+ YD Sbjct: 121 AQGKTVQLRRQPAPPAKAHFVSTENNEPVTLHPVAYD 157
>P46778:RL21_HUMAN 60S ribosomal protein L21 - Homo sapiens (Human)| Length = 160 Score = 159 bits (402), Expect = 1e-38 Identities = 77/152 (50%), Positives = 104/152 (68%), Gaps = 2/152 (1%) Frame = +3 Query: 108 GLRSRTRDLFARPFRKKGYIALTTYLRTYKVGEHVDVKVNGAVHKGMPHKFYHGRTGRVW 287 G R TR +F+RPFRK G + L TY+R YK G+ VD+K G V KGMPHK YHG+TGRV+ Sbjct: 6 GKRRGTRYMFSRPFRKHGVVPLATYMRIYKKGDIVDIKGMGTVQKGMPHKCYHGKTGRVY 65 Query: 288 NVTKRAIGVEINKQVGNRIIKKRIHVRVEHVQPSRCNEEFLQRKLNNDKLKAEAKARGEV 467 NVT+ A+G+ +NKQV +I+ KRI+VR+EH++ S+ + FL+R ND+ K EAK +G Sbjct: 66 NVTQHAVGIVVNKQVKGKILAKRINVRIEHIKHSKSRDSFLKRVKENDQKKKEAKEKGTW 125 Query: 468 ISTKRQPAGPKPGFMV--EGTTIETVTPIPYD 557 + KRQPA P+ V G E + PIPY+ Sbjct: 126 VQLKRQPAPPREAHFVRTNGKEPELLEPIPYE 157
>Q6QN05:RL21_CHILA 60S ribosomal protein L21 - Chinchilla lanigera (Long-tailed| chinchilla) (Chinchilla villidera) Length = 160 Score = 158 bits (399), Expect = 3e-38 Identities = 76/152 (50%), Positives = 104/152 (68%), Gaps = 2/152 (1%) Frame = +3 Query: 108 GLRSRTRDLFARPFRKKGYIALTTYLRTYKVGEHVDVKVNGAVHKGMPHKFYHGRTGRVW 287 G R TR +F+RP+RK G + L TY+R YK G+ VD+K G V KGMPHK YHG+TGRV+ Sbjct: 6 GKRRGTRYMFSRPYRKHGVVPLATYMRIYKKGDIVDIKGMGTVQKGMPHKCYHGKTGRVY 65 Query: 288 NVTKRAIGVEINKQVGNRIIKKRIHVRVEHVQPSRCNEEFLQRKLNNDKLKAEAKARGEV 467 NVT+ A+G+ +NKQV +I+ KRI+VR+EH++ S+ + FL+R ND+ K EAK +G Sbjct: 66 NVTQHAVGIVVNKQVKGKILAKRINVRIEHIKHSKSRDSFLKRVKENDQKKKEAKEKGTW 125 Query: 468 ISTKRQPAGPKPGFMV--EGTTIETVTPIPYD 557 + KRQPA P+ V G E + PIPY+ Sbjct: 126 VQLKRQPAPPREAHFVRTNGKEPELLEPIPYE 157
>P20280:RL21_RAT 60S ribosomal protein L21 - Rattus norvegicus (Rat)| Length = 160 Score = 154 bits (389), Expect = 4e-37 Identities = 75/152 (49%), Positives = 102/152 (67%), Gaps = 2/152 (1%) Frame = +3 Query: 108 GLRSRTRDLFARPFRKKGYIALTTYLRTYKVGEHVDVKVNGAVHKGMPHKFYHGRTGRVW 287 G R TR +F+RPFRK G + L TY+R YK G+ VD+K G V KGMPHK YHG+TGRV+ Sbjct: 6 GKRRGTRYMFSRPFRKHGVVPLATYMRIYKKGDIVDIKGMGTVQKGMPHKCYHGKTGRVY 65 Query: 288 NVTKRAIGVEINKQVGNRIIKKRIHVRVEHVQPSRCNEEFLQRKLNNDKLKAEAKARGEV 467 NVT+ A+G+ +NKQV +I+ KRI+VR+EH++ S+ + FL+R ND+ K EAK +G Sbjct: 66 NVTQHAVGIIVNKQVKGKILAKRINVRIEHIKHSKSRDSFLKRVKENDQKKKEAKEKGTW 125 Query: 468 ISTKRQPAGPKPGFMV--EGTTIETVTPIPYD 557 + QPA P+ V G E + PIPY+ Sbjct: 126 VQLNGQPAPPREAHFVRTNGKEPELLEPIPYE 157
>O09167:RL21_MOUSE 60S ribosomal protein L21 - Mus musculus (Mouse)| Length = 160 Score = 154 bits (388), Expect = 5e-37 Identities = 75/152 (49%), Positives = 102/152 (67%), Gaps = 2/152 (1%) Frame = +3 Query: 108 GLRSRTRDLFARPFRKKGYIALTTYLRTYKVGEHVDVKVNGAVHKGMPHKFYHGRTGRVW 287 G R TR +F+RPFRK G + L TY+R YK G+ VD+K G V KGMPHK YHG+TGRV+ Sbjct: 6 GKRRGTRYMFSRPFRKHGVVPLATYMRIYKKGDIVDIKGMGTVQKGMPHKCYHGKTGRVY 65 Query: 288 NVTKRAIGVEINKQVGNRIIKKRIHVRVEHVQPSRCNEEFLQRKLNNDKLKAEAKARGEV 467 NVT+ A+G+ +NKQV +I+ KRI+VR+EH++ S+ + FL+R ND+ K EAK +G Sbjct: 66 NVTQHAVGIIVNKQVKGKILAKRINVRIEHIKHSKSRDSFLKRVKENDQKKKEAKEKGTW 125 Query: 468 ISTKRQPAGPKPGFMV--EGTTIETVTPIPYD 557 + KR A P+ V G E + PIPY+ Sbjct: 126 VQLKRHAAPPREAHFVRTNGKEPELLEPIPYE 157
>P34334:RL21_CAEEL 60S ribosomal protein L21 - Caenorhabditis elegans| Length = 161 Score = 143 bits (361), Expect = 7e-34 Identities = 72/160 (45%), Positives = 104/160 (65%), Gaps = 3/160 (1%) Frame = +3 Query: 93 MPAGHGLRSRTRDLFARPFRKKGYIALTTYLRTYKVGEHVDVKVNGAVHKGMPHKFYHGR 272 M GLR TR +FAR FRK G L+TY YK G+ VD+K NGA KGMP K YHGR Sbjct: 1 MTNSKGLRRGTRYMFARDFRKHGVEHLSTYYTQYKRGDLVDIKTNGAFQKGMPFKAYHGR 60 Query: 273 TGRVWNVTKRAIGVEINKQVGNRIIKKRIHVRVEHVQPSRCNEEFLQRKLNNDKLKAEAK 452 TGR++NVT+ A+G+ +NK+V I+ KRI++R+EH++PS+C +FL R +ND+ + AK Sbjct: 61 TGRIFNVTRGAVGIIVNKRVRGNILPKRINIRIEHIKPSKCRTDFLNRVKSNDEKRKAAK 120 Query: 453 ARGE-VISTKRQPAGPKPGFMV--EGTTIETVTPIPYDVV 563 + G+ V + KR P P+ V + E + P+ +++V Sbjct: 121 SAGQPVPALKRLPVAPRGAHTVTTQNNEPELLAPLRFEIV 160
>P38653:RL21_ENTHI 60S ribosomal protein L21 - Entamoeba histolytica| Length = 166 Score = 140 bits (354), Expect = 4e-33 Identities = 71/164 (43%), Positives = 102/164 (62%), Gaps = 9/164 (5%) Frame = +3 Query: 93 MPAGHGLRSRTRDLFARPFRKKGYIALTTYLRTYKVGEHVDVKVNGAVHKGMPHKFYHGR 272 MP +G RTR LF RPFR G +T L TYKVG++V + N ++ G+P+K +HG+ Sbjct: 1 MPLSNGRNRRTRKLFKRPFRGHGLSNTSTILHTYKVGDYVTILCNSSIQHGLPYKAFHGK 60 Query: 273 TGRVWNVTKRAIGVEINKQVGNRIIKKRIHVRVEHVQPSRCNEEFLQRKL-------NND 431 TGRVWNV AIGV +NK+V NRI+ KR+H+ EH++PS C ++FL+RK N Sbjct: 61 TGRVWNVNPHAIGVMVNKKVNNRIVVKRLHISPEHIRPSGCQKDFLERKAAVAAIRKQNI 120 Query: 432 KLKAEAKARGEVISTKRQPAGPKPGFMVEGTTIE--TVTPIPYD 557 +LK E K + KR P P+P +++G I+ TV P+ ++ Sbjct: 121 QLKKEGKPL-LPLPAKRLPKQPRPAELIKGADIKFTTVAPLKFE 163
>P49667:RL21_PYUST 60S ribosomal protein L21 - Pyura stolonifera (Sea squirt)| Length = 156 Score = 138 bits (348), Expect = 2e-32 Identities = 67/147 (45%), Positives = 99/147 (67%), Gaps = 1/147 (0%) Frame = +3 Query: 120 RTRDLFARPFRKKGYIALTTYLRTYKVGEHVDVKVNGAVHKGMPHKFYHGRTGRVWNVTK 299 R D+F++ FR++G I L YL YK G+ VD+K +G+V K PHK YHG+TGR++NVT+ Sbjct: 9 RGSDMFSKKFRERGAIPLNKYLTVYKKGDIVDIKGDGSVQKVCPHKVYHGKTGRIFNVTQ 68 Query: 300 RAIGVEINKQVGNRIIKKRIHVRVEHVQPSRCNEEFLQRKLNNDKLKAEAKARGEVISTK 479 A+G+ +NKQV RII KRI+VR+EH++ S+ F+QR N++ + EA+ + ++ K Sbjct: 69 HAVGIIVNKQVRGRIIAKRINVRIEHIKHSKSRISFIQRVHENERKRKEAREKKIRVNLK 128 Query: 480 RQPAGPKPGFMVEGTT-IETVTPIPYD 557 RQP P+ G V + E V PIPY+ Sbjct: 129 RQPQQPRTGHFVRSSAEPELVEPIPYE 155
>Q8SRW8:RL21_ENCCU 60S ribosomal protein L21 - Encephalitozoon cuniculi| Length = 160 Score = 117 bits (294), Expect = 4e-26 Identities = 59/132 (44%), Positives = 92/132 (69%), Gaps = 1/132 (0%) Frame = +3 Query: 108 GLRSRTRDLFARPFRKKGYIALTTYLRTYKVGEHVDVKVNGAVHKGMPHKFYHGRTGRVW 287 G R TR LF++ RK G ++ YL Y++G+ VD+ VN A+ KGMPHK+YHGRTGRV+ Sbjct: 5 GYRRGTRYLFSQDHRKHGVAHVSKYLEKYEIGDMVDILVNPAMMKGMPHKYYHGRTGRVY 64 Query: 288 NVTKRAIGVEINKQVGNRIIKKRIHVRVEHVQPSRCNEEFLQRKLNNDKLKAEAKARGEV 467 +V R++ V + K+V + + K+I VR+EHV+ SRC+EE +R L ++ +A++RG V Sbjct: 65 DVKPRSLNVALYKRVRGKYVIKKIIVRIEHVRKSRCSEESQKRILMAAEMARDAESRGVV 124 Query: 468 IS-TKRQPAGPK 500 ++ +KR+ GP+ Sbjct: 125 LAPSKRKIEGPR 136
>P49666:RL21_PIG 60S ribosomal protein L21 - Sus scrofa (Pig)| Length = 62 Score = 74.3 bits (181), Expect = 5e-13 Identities = 33/57 (57%), Positives = 41/57 (71%) Frame = +3 Query: 108 GLRSRTRDLFARPFRKKGYIALTTYLRTYKVGEHVDVKVNGAVHKGMPHKFYHGRTG 278 G R TR +F+RPFRK G + L TY+R YK G+ VD+K G V KG+PHK YHG+TG Sbjct: 6 GKRRGTRYMFSRPFRKHGVVPLATYMRIYKKGDIVDIKGMGTVQKGLPHKCYHGKTG 62
>Q4JB11:RL21_SULAC 50S ribosomal protein L21e - Sulfolobus acidocaldarius| Length = 103 Score = 70.1 bits (170), Expect = 9e-12 Identities = 39/94 (41%), Positives = 58/94 (61%), Gaps = 1/94 (1%) Frame = +3 Query: 108 GLRSRTRDLFARPFRKKGYIA-LTTYLRTYKVGEHVDVKVNGAVHKGMPHKFYHGRTGRV 284 G RS+TR L + R+KG I L+ + Y GE+V VK+N ++HKGMPH+ YHG+ G V Sbjct: 7 GYRSKTRKLLEKKVREKGAIPKLSLLMHDYSQGEYVVVKINPSIHKGMPHRRYHGKVGLV 66 Query: 285 WNVTKRAIGVEINKQVGNRIIKKRIHVRVEHVQP 386 V KR E+ +G++ ++ + VR EH+ P Sbjct: 67 --VGKRGKAYEVKVNIGDK--ERVLIVRPEHLIP 96
>P58077:RL21_AERPE 50S ribosomal protein L21e - Aeropyrum pernix| Length = 107 Score = 63.9 bits (154), Expect = 7e-10 Identities = 40/98 (40%), Positives = 58/98 (59%), Gaps = 2/98 (2%) Frame = +3 Query: 99 AGHGLRSRTRDLFARPFRKKGYIA-LTTYLRTYKVGEHVDVKVNGAVHK-GMPHKFYHGR 272 A G R+RTR L +P R+KG I L+TYLR Y+VG+ V + +N + GMPH+ +HG Sbjct: 4 APRGYRNRTRRLLRKPVREKGSIPRLSTYLREYRVGDKVAIIINPSFPDWGMPHRRFHGL 63 Query: 273 TGRVWNVTKRAIGVEINKQVGNRIIKKRIHVRVEHVQP 386 TG V V KR E+ +G + +K + V H++P Sbjct: 64 TGTV--VGKRGEAYEVEVYLGRK--RKTLFVPPVHLKP 97
>Q975F2:RL21_SULTO 50S ribosomal protein L21e - Sulfolobus tokodaii| Length = 103 Score = 61.6 bits (148), Expect = 3e-09 Identities = 34/92 (36%), Positives = 56/92 (60%), Gaps = 1/92 (1%) Frame = +3 Query: 108 GLRSRTRDLFARPFRKKGYIA-LTTYLRTYKVGEHVDVKVNGAVHKGMPHKFYHGRTGRV 284 G R+RTR L + R++G + L+ + +K G++V +K+N +VHKGMPH+ YHG+ G + Sbjct: 7 GYRTRTRKLLTKNVRERGAVPRLSLLMEEFKEGDYVVIKINPSVHKGMPHRRYHGKVGVI 66 Query: 285 WNVTKRAIGVEINKQVGNRIIKKRIHVRVEHV 380 KR + +G++ +K I VR EH+ Sbjct: 67 QG--KRGKAYIVRVTLGDK--EKVIIVRPEHL 94
>Q9UXE0:RL21_SULSO 50S ribosomal protein L21e - Sulfolobus solfataricus| Length = 101 Score = 61.2 bits (147), Expect = 4e-09 Identities = 34/94 (36%), Positives = 60/94 (63%), Gaps = 1/94 (1%) Frame = +3 Query: 108 GLRSRTRDLFARPFRKKGYI-ALTTYLRTYKVGEHVDVKVNGAVHKGMPHKFYHGRTGRV 284 G R+R+R L + R++G + +L+ + YK G++V VK+N +VH+GMPH+ Y G+ G++ Sbjct: 7 GYRTRSRSLLRKSPRERGAVPSLSKLMVEYKEGDNVVVKINPSVHQGMPHRRYQGKVGKI 66 Query: 285 WNVTKRAIGVEINKQVGNRIIKKRIHVRVEHVQP 386 + KR ++ +G++ +K I VR EH+ P Sbjct: 67 --IGKRGRAYLVSVTLGDK--EKVIIVRPEHLVP 96
>P54013:RL21_METJA 50S ribosomal protein L21e - Methanococcus jannaschii| Length = 98 Score = 60.8 bits (146), Expect = 6e-09 Identities = 34/94 (36%), Positives = 55/94 (58%) Frame = +3 Query: 108 GLRSRTRDLFARPFRKKGYIALTTYLRTYKVGEHVDVKVNGAVHKGMPHKFYHGRTGRVW 287 G R +TR ++ R++G +T LR +K GE+V + ++ +VHKGMPH +HGRTG V Sbjct: 7 GFRRKTRKKLSKHPRERGLYPITRALREFKEGEYVHIVIDPSVHKGMPHPRFHGRTGIVV 66 Query: 288 NVTKRAIGVEINKQVGNRIIKKRIHVRVEHVQPS 389 RA V++ G + K+I +H++P+ Sbjct: 67 GKQGRAFIVKVRD--GGKY--KQIIAYPQHLRPA 96
>Q8TUU3:RL21_METKA 50S ribosomal protein L21e - Methanopyrus kandleri| Length = 102 Score = 59.3 bits (142), Expect = 2e-08 Identities = 35/93 (37%), Positives = 53/93 (56%) Frame = +3 Query: 108 GLRSRTRDLFARPFRKKGYIALTTYLRTYKVGEHVDVKVNGAVHKGMPHKFYHGRTGRVW 287 G RSRTR + R++G L + ++ G+ V + ++ +VHKGMPH YHGRTG V Sbjct: 7 GFRSRTRKKLRKKPRERGLSPLGPMTQEFEEGQKVHIVIDPSVHKGMPHPRYHGRTGEVV 66 Query: 288 NVTKRAIGVEINKQVGNRIIKKRIHVRVEHVQP 386 RA V+I G + +K++ V EH++P Sbjct: 67 GRQGRAYIVKIRD--GGK--EKKLIVYPEHLKP 95
>Q9UZP1:RL21_PYRAB 50S ribosomal protein L21e - Pyrococcus abyssi| Length = 97 Score = 58.5 bits (140), Expect = 3e-08 Identities = 31/96 (32%), Positives = 52/96 (54%) Frame = +3 Query: 105 HGLRSRTRDLFARPFRKKGYIALTTYLRTYKVGEHVDVKVNGAVHKGMPHKFYHGRTGRV 284 H R +TR + R++G LT +L+ ++VG+ V + + + HKGMP +HGRTG V Sbjct: 6 HSFRRKTRKKLRKHPRRRGLPPLTRFLQEFEVGQRVHIVIEPSYHKGMPDPRFHGRTGTV 65 Query: 285 WNVTKRAIGVEINKQVGNRIIKKRIHVRVEHVQPSR 392 V KR + GN++ K + + H++P + Sbjct: 66 --VGKRGDAYIVEVPDGNKV--KTLFIHPVHLRPQK 97
>O74001:RL21_PYRHO 50S ribosomal protein L21e - Pyrococcus horikoshii| Length = 97 Score = 58.2 bits (139), Expect = 4e-08 Identities = 31/96 (32%), Positives = 52/96 (54%) Frame = +3 Query: 105 HGLRSRTRDLFARPFRKKGYIALTTYLRTYKVGEHVDVKVNGAVHKGMPHKFYHGRTGRV 284 H R +TR + R++G LT +L+ ++VG+ V + + + HKGMP +HGRTG V Sbjct: 6 HSFRRKTRKKLRKHPRRRGLPPLTRFLQEFEVGQKVHIVIEPSYHKGMPDPRFHGRTGTV 65 Query: 285 WNVTKRAIGVEINKQVGNRIIKKRIHVRVEHVQPSR 392 V KR + GN++ K + + H++P + Sbjct: 66 --VGKRGDAYIVEVPDGNKV--KTLFIHPVHLRPQK 97
>Q8U217:RL21_PYRFU 50S ribosomal protein L21e - Pyrococcus furiosus| Length = 97 Score = 57.8 bits (138), Expect = 5e-08 Identities = 30/96 (31%), Positives = 54/96 (56%) Frame = +3 Query: 105 HGLRSRTRDLFARPFRKKGYIALTTYLRTYKVGEHVDVKVNGAVHKGMPHKFYHGRTGRV 284 H R +TR ++ R++G LT +L+ ++VG+ V + + + HKGMP +HGRTG V Sbjct: 6 HSFRRKTRKKLSKHPRRRGLPPLTRFLQEFEVGQRVHIVIEPSYHKGMPDPRFHGRTGTV 65 Query: 285 WNVTKRAIGVEINKQVGNRIIKKRIHVRVEHVQPSR 392 V KR + + G+++ K + + H++P + Sbjct: 66 --VGKRGEAYIVEIKDGSKV--KTLFIHPVHLRPQK 97
>Q2FS99:RL21_METHJ 50S ribosomal protein L21e - Methanospirillum hungatei (strain JF-1| / DSM 864) Length = 97 Score = 56.6 bits (135), Expect = 1e-07 Identities = 31/97 (31%), Positives = 54/97 (55%), Gaps = 3/97 (3%) Frame = +3 Query: 93 MPAGHGLRSRTRDLFARPFRKKGYIALTTYLRTYKVGEHVDVKVNGAVHKGMPHKFYHGR 272 M +G R +TR F + R +G + +T ++ +++G+ V + ++ KGMPH+ +HG+ Sbjct: 1 MALHNGPRKKTRYKFKKDLRSRGVLPVTRVIQQFELGQKVHIVCEPSIQKGMPHRRFHGK 60 Query: 273 TGRVWNVTKRAIGVEINKQVGNR---IIKKRIHVRVE 374 TG V RA VEI GN+ +I + H+R + Sbjct: 61 TGSVVGQRGRAWLVEIRD--GNKFKTVISRPQHLRAQ 95
>Q5JI51:RL21_PYRKO 50S ribosomal protein L21e - Pyrococcus kodakaraensis (Thermococcus| kodakaraensis) Length = 98 Score = 55.5 bits (132), Expect = 2e-07 Identities = 30/96 (31%), Positives = 51/96 (53%) Frame = +3 Query: 105 HGLRSRTRDLFARPFRKKGYIALTTYLRTYKVGEHVDVKVNGAVHKGMPHKFYHGRTGRV 284 H R +TR ++ R++G LT +L+ ++VG+ V + + + HKGMP +HGRTG V Sbjct: 6 HSFRRKTRGKLSKHPRRRGLPPLTRFLQEFEVGQKVHIVIEPSYHKGMPDPRFHGRTGTV 65 Query: 285 WNVTKRAIGVEINKQVGNRIIKKRIHVRVEHVQPSR 392 V KR + G ++ K + H++P + Sbjct: 66 --VGKRGDAYIVQITDGGKV--KTFFIHPVHLRPQK 97
>Q6M125:RL21_METMP 50S ribosomal protein L21e - Methanococcus maripaludis| Length = 97 Score = 54.7 bits (130), Expect = 4e-07 Identities = 35/100 (35%), Positives = 53/100 (53%) Frame = +3 Query: 93 MPAGHGLRSRTRDLFARPFRKKGYIALTTYLRTYKVGEHVDVKVNGAVHKGMPHKFYHGR 272 M G RS+TR + R+KG LT L+ Y G+ V V ++ +V KGMPH +HG+ Sbjct: 1 MQKSEGFRSKTRYKLQKHPRQKGMAPLTRALKCYTEGDLVHVVLDPSVQKGMPHPKFHGK 60 Query: 273 TGRVWNVTKRAIGVEINKQVGNRIIKKRIHVRVEHVQPSR 392 TG V V +R + + G + K I R +H++ S+ Sbjct: 61 TGVV--VAQRGSSFLVRVKDGGKY--KDIIARPQHLRESK 96
>O28743:RL21_ARCFU 50S ribosomal protein L21e - Archaeoglobus fulgidus| Length = 97 Score = 53.5 bits (127), Expect = 9e-07 Identities = 32/94 (34%), Positives = 52/94 (55%) Frame = +3 Query: 105 HGLRSRTRDLFARPFRKKGYIALTTYLRTYKVGEHVDVKVNGAVHKGMPHKFYHGRTGRV 284 HG R ++ + R+KG + + +L+T+ VG+ V + + A KGMPH + GRTG V Sbjct: 6 HGFRFKSGRKLRKKVREKG-VRIRKFLQTFDVGQRVHIDIEPASQKGMPHPRFQGRTGVV 64 Query: 285 WNVTKRAIGVEINKQVGNRIIKKRIHVRVEHVQP 386 RA V++ G ++ K + VR EH++P Sbjct: 65 IGQRGRAYLVQVRD--GGKM--KTLIVRPEHLKP 94
>Q8ZTB5:RL21_PYRAE 50S ribosomal protein L21e - Pyrobaculum aerophilum| Length = 100 Score = 52.0 bits (123), Expect = 3e-06 Identities = 32/94 (34%), Positives = 49/94 (52%) Frame = +3 Query: 105 HGLRSRTRDLFARPFRKKGYIALTTYLRTYKVGEHVDVKVNGAVHKGMPHKFYHGRTGRV 284 HG R +TR L + R+KG L+ L YKVG+ V + ++ PH+ Y G+ G V Sbjct: 6 HGYRYKTRKLLRKKPREKGLSGLSRLLYEYKVGDKVIIDIDSTFISTAPHRRYQGKVGTV 65 Query: 285 WNVTKRAIGVEINKQVGNRIIKKRIHVRVEHVQP 386 + RA +E +G++ KK I EH++P Sbjct: 66 VGIRGRAYVIE--TFLGDK--KKIIITTPEHLKP 95
>Q2NE44:RL21_METST 50S ribosomal protein L21e - Methanosphaera stadtmanae (strain DSM| 3091) Length = 96 Score = 52.0 bits (123), Expect = 3e-06 Identities = 30/97 (30%), Positives = 51/97 (52%) Frame = +3 Query: 93 MPAGHGLRSRTRDLFARPFRKKGYIALTTYLRTYKVGEHVDVKVNGAVHKGMPHKFYHGR 272 M G +SR+R R R K ++ ++ ++VG V + V+ ++H+G PH +HG+ Sbjct: 1 MRKSKGFKSRSRYKLKRSIRPKRANPISRKIQVFEVGNKVHIIVDSSIHRGQPHPRFHGK 60 Query: 273 TGRVWNVTKRAIGVEINKQVGNRIIKKRIHVRVEHVQ 383 TG V +A V I GN+ K + +R EH++ Sbjct: 61 TGEVVGQKGKAYLVAIKD--GNK--AKELIIRPEHLK 93
>O27378:RL21_METTH 50S ribosomal protein L21e - Methanobacterium thermoautotrophicum| Length = 96 Score = 51.2 bits (121), Expect = 4e-06 Identities = 29/97 (29%), Positives = 53/97 (54%) Frame = +3 Query: 93 MPAGHGLRSRTRDLFARPFRKKGYIALTTYLRTYKVGEHVDVKVNGAVHKGMPHKFYHGR 272 M G RS+TR + R +T ++++ G+ V + ++ ++H+G PH +HG+ Sbjct: 1 MRRSRGFRSKTRHKLQKVKRPGRSNPITRKIQSFNEGDLVHIIIDPSIHRGQPHPRFHGK 60 Query: 273 TGRVWNVTKRAIGVEINKQVGNRIIKKRIHVRVEHVQ 383 TGRV + ++ V + GN+ K++ VR EH+Q Sbjct: 61 TGRVVGMMGKSYVVALKD--GNK--DKQLVVRPEHLQ 93
>Q74N21:RL21_NANEQ 50S ribosomal protein L21e - Nanoarchaeum equitans| Length = 98 Score = 48.5 bits (114), Expect = 3e-05 Identities = 29/94 (30%), Positives = 47/94 (50%) Frame = +3 Query: 102 GHGLRSRTRDLFARPFRKKGYIALTTYLRTYKVGEHVDVKVNGAVHKGMPHKFYHGRTGR 281 G G R +TRD ++ R++G + +T L+ + + V + + + H GMPH YHG G Sbjct: 6 GKGFRRKTRDKLSKHPRQRGKLTITRILQKFNNNDKVAIVIEPSWHYGMPHPRYHGLVGT 65 Query: 282 VWNVTKRAIGVEINKQVGNRIIKKRIHVRVEHVQ 383 V V KR E+ + KK + V H++ Sbjct: 66 V--VGKRGNCYEVELEFNGE--KKLLIVHPAHLK 95
>Q6L228:RL21_PICTO 50S ribosomal protein L21e - Picrophilus torridus| Length = 97 Score = 43.9 bits (102), Expect = 7e-04 Identities = 25/90 (27%), Positives = 48/90 (53%), Gaps = 3/90 (3%) Frame = +3 Query: 108 GLRSRTRDLFARPFRKKGYIALTTYLRTYKVGEHVDVKVNGAVHKGMPHKFYHGRTGRVW 287 G RS +R + + + KG + ++T++VG+ + +N AV GMPH + G TG + Sbjct: 7 GPRSGSRRVMTKSVKNKGMPKVNEMMKTFEVGDRAAIVINSAVPDGMPHHDFQGITGVIT 66 Query: 288 NVTKRAIGVEINKQVGN---RIIKKRIHVR 368 + + ++ +VGN ++I +H+R Sbjct: 67 GM--QGSCYILSFKVGNVEKKVIAAPVHLR 94
>Q8TQU3:RL21_METAC 50S ribosomal protein L21e - Methanosarcina acetivorans| Length = 97 Score = 43.9 bits (102), Expect = 7e-04 Identities = 25/100 (25%), Positives = 52/100 (52%) Frame = +3 Query: 93 MPAGHGLRSRTRDLFARPFRKKGYIALTTYLRTYKVGEHVDVKVNGAVHKGMPHKFYHGR 272 M HG + TR + R++G ++ ++ ++ G+ V + ++ +V KGMP+ + G Sbjct: 1 MTNSHGEKRCTRYKLQKTVRERGISPVSRAIQEFEEGQMVHIDIDPSVQKGMPNPKFQGS 60 Query: 273 TGRVWNVTKRAIGVEINKQVGNRIIKKRIHVRVEHVQPSR 392 TG+V R+ +E+ GN + K + +H++P + Sbjct: 61 TGKVIGQRGRSYVLEVRS--GNAM--KEVFSLPQHLKPQK 96
>Q3IPL7:RL21_NATPD 50S ribosomal protein L21e - Natronomonas pharaonis (strain DSM| 2160 / ATCC 35678) Length = 97 Score = 42.4 bits (98), Expect = 0.002 Identities = 29/93 (31%), Positives = 44/93 (47%), Gaps = 1/93 (1%) Frame = +3 Query: 93 MPAGHGLRSRTRDLFARPFRKKGYIALTTYLRTYKVGEHVDVKVNGAVHKGMPHKFYHGR 272 MP+ +G R TR+ R++G + Y GE V +K++ +V G H ++GR Sbjct: 1 MPSSNGPRQATRNKLKNDARERGTSPPQRSIEEYDDGEKVHLKLDPSVPNGQFHPRFNGR 60 Query: 273 TGRVWNVTKRAIGVEI-NKQVGNRIIKKRIHVR 368 TG V A VEI + V +I H+R Sbjct: 61 TGTVVGEQGDAFKVEIEDGNVTKTVIAAPAHLR 93
>Q466S9:RL21_METBF 50S ribosomal protein L21e - Methanosarcina barkeri (strain Fusaro| / DSM 804) Length = 97 Score = 42.0 bits (97), Expect = 0.003 Identities = 23/100 (23%), Positives = 52/100 (52%) Frame = +3 Query: 93 MPAGHGLRSRTRDLFARPFRKKGYIALTTYLRTYKVGEHVDVKVNGAVHKGMPHKFYHGR 272 M HG + TR + R++G ++ ++ ++ G+ V + ++ ++ KGMP+ + G Sbjct: 1 MTNSHGEKRCTRYKLQKTVRERGISPVSKAIQEFEEGQMVHIDIDPSIQKGMPNPKFQGS 60 Query: 273 TGRVWNVTKRAIGVEINKQVGNRIIKKRIHVRVEHVQPSR 392 TG++ R+ +E+ GN + K + +H++P + Sbjct: 61 TGKIVGQRGRSYILEVRS--GNAM--KEVISLPQHLKPQK 96
>Q8PU21:RL21_METMA 50S ribosomal protein L21e - Methanosarcina mazei (Methanosarcina| frisia) Length = 97 Score = 41.2 bits (95), Expect = 0.005 Identities = 25/100 (25%), Positives = 52/100 (52%) Frame = +3 Query: 93 MPAGHGLRSRTRDLFARPFRKKGYIALTTYLRTYKVGEHVDVKVNGAVHKGMPHKFYHGR 272 M HG R TR + R++G ++ ++ ++ G+ V + ++ +V KGMP+ + G Sbjct: 1 MTNSHGERRCTRYKLQKTVRERGISPVSKAIQEFEDGQMVHIDIDPSVQKGMPNPKFQGF 60 Query: 273 TGRVWNVTKRAIGVEINKQVGNRIIKKRIHVRVEHVQPSR 392 TG+V + +R + + GN + K + +H++P + Sbjct: 61 TGKV--IGQRGRSYILAVREGNSM--KEVFSVPQHLKPQK 96
>P49628:RL21_XENLA 60S ribosomal protein L21 - Xenopus laevis (African clawed frog)| Length = 33 Score = 40.4 bits (93), Expect = 0.008 Identities = 17/32 (53%), Positives = 23/32 (71%) Frame = +3 Query: 141 RPFRKKGYIALTTYLRTYKVGEHVDVKVNGAV 236 RPFRK G + L+TY+R YK G+ VD+K G + Sbjct: 1 RPFRKHGAVPLSTYMRIYKKGDIVDIKGMGTI 32
>Q9HIN8:RL21_THEAC 50S ribosomal protein L21e - Thermoplasma acidophilum| Length = 98 Score = 36.2 bits (82), Expect = 0.15 Identities = 16/60 (26%), Positives = 32/60 (53%) Frame = +3 Query: 105 HGLRSRTRDLFARPFRKKGYIALTTYLRTYKVGEHVDVKVNGAVHKGMPHKFYHGRTGRV 284 HG RS +R + ++ + +++ ++ G+ V + + +VH GMP+ + G TG V Sbjct: 6 HGPRSGSRRKLTKSAEERKRSVIGRFMQEFEPGDRVAIDIEPSVHAGMPYHRFQGYTGVV 65
>Q97BZ1:RL21_THEVO 50S ribosomal protein L21e - Thermoplasma volcanium| Length = 98 Score = 34.3 bits (77), Expect = 0.57 Identities = 20/90 (22%), Positives = 42/90 (46%), Gaps = 2/90 (2%) Frame = +3 Query: 105 HGLRSRTRDLFARPFRKKGYIALTTYLRTYKVGEHVDVKVNGAVHKGMPHKFYHGRTGRV 284 HG RS +R + ++ + ++ + G+ V + + +VH GMP+ + G TG V Sbjct: 6 HGPRSGSRRKLTKSKEERKKSIIGRMMQEFSPGDRVAIDIEPSVHNGMPYHRFQGYTGIV 65 Query: 285 WNVTKRA--IGVEINKQVGNRIIKKRIHVR 368 +GV++ + +I +H++ Sbjct: 66 EGAQGNCYKVGVKVG-SLTKYVIASPVHLK 94
>P82453:RL21_SPIOL 60S ribosomal protein L21 - Spinacia oleracea (Spinach)| Length = 16 Score = 33.9 bits (76), Expect = 0.74 Identities = 14/16 (87%), Positives = 15/16 (93%) Frame = +3 Query: 96 PAGHGLRSRTRDLFAR 143 PAGHG R+RTRDLFAR Sbjct: 1 PAGHGARARTRDLFAR 16
>Q6CQ07:PACC_KLULA pH-response transcription factor pacC/RIM101 - Kluyveromyces lactis| (Yeast) (Candida sphaerica) Length = 517 Score = 30.8 bits (68), Expect = 6.3 Identities = 16/50 (32%), Positives = 27/50 (54%) Frame = +3 Query: 354 RIHVRVEHVQPSRCNEEFLQRKLNNDKLKAEAKARGEVISTKRQPAGPKP 503 R+HV+++ S CN++F + + LK K E +S ++ GPKP Sbjct: 169 RVHVQLKPFACSTCNKKFKRPQ----DLKKHLKVHNEELSLLKKKRGPKP 214 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 99,494,219 Number of extensions: 1922703 Number of successful extensions: 5986 Number of sequences better than 10.0: 43 Number of HSP's gapped: 5981 Number of HSP's successfully gapped: 43 Length of query: 261 Length of database: 100,686,439 Length adjustment: 111 Effective length of query: 150 Effective length of database: 70,239,694 Effective search space: 10535954100 Effective search space used: 10535954100 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
