ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf140a12
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1AK066707:Os03g0775600 440 e-123
2AK106362:Os03g0775600 372 e-103
3AK059414:Os03g0228200 128 1e-29
4AK062415:Os08g0151600 55 1e-07
5AK066413:Os03g0333800 31 2.8
6Os12g0511100:Os12g0511100 30 3.6
7AK070507:Os06g0252800 30 3.6
8AK066809:Os09g0246200 30 3.6
9AB120431:Os09g0246200 30 3.6
10AB096014:Os09g0246200 30 3.6
11AK099755:Os02g0110600 30 4.7
12AK069727:Os02g0110600 30 4.7
13Os07g0567500:Os07g0567500 30 6.2
14Os04g0519100:Os04g0519100 30 6.2
15Os04g0688400:Os04g0688400 29 8.1
16AY224503:Os07g0673400 29 8.1
17AK111154: 29 8.1
18AK107647: 29 8.1
19AK105297:Os03g0859300 29 8.1

>AK066707:Os03g0775600 |
          Length = 303
 Score =  440 bits (1131), Expect = e-123
 Identities = 224/298 (75%), Positives = 244/298 (81%), Gaps = 1/298 (0%)
 Frame = +2

Query: 275  MGDGVAFEAARKIIMHPLYASRSSPWLDLKVFYVRVSNCMVDESAPDHLTLNHIPLSPDT 454
            M D VAFE ARKIIMHPLY  RSSPWLDLKVFYVRVSNC VDESAPD LTLNHIPLSPDT
Sbjct: 1    MADEVAFETARKIIMHPLYTPRSSPWLDLKVFYVRVSNCEVDESAPDRLTLNHIPLSPDT 60

Query: 455  VIEVNGRRSSMHTEFVSSSLRRDRIDKKTEEATYVSTDSIRMTGSVRFQVFDKNDLLLTG 634
            VIEVNG+RSSMHTEF+SSSLRRDR+DK TEEAT+VSTDSIRMTGSVRFQVFDKNDLLLTG
Sbjct: 61   VIEVNGQRSSMHTEFISSSLRRDRVDKMTEEATFVSTDSIRMTGSVRFQVFDKNDLLLTG 120

Query: 635  DLELCNANGLVGEPKSSSKKWNIKCHSSASSSGFLKGKMSTGPDSAHPVVEVYVAGTFSG 814
            DLELC+ANG+VGE K+SSK+WN+KC  ++S +GFLKGK ST  +S HPV+EVY+AGTF G
Sbjct: 121  DLELCSANGVVGESKNSSKRWNMKCQPASSCNGFLKGKPSTASESVHPVIEVYLAGTFCG 180

Query: 815  TPIILTKTVQFISRRKSQMKLKLDSIPENEATELHTENSHGDSLKVSEFQDPKLETDMD- 991
            TPIILTKTVQ ISRRKSQMKLKLDSIPENEATE   E  + DSL+VSE Q+PK E D+D 
Sbjct: 181  TPIILTKTVQHISRRKSQMKLKLDSIPENEATEQQKEELNEDSLQVSESQNPKSEQDVDV 240

Query: 992  DYNSLYSRQDFLEGEDGELSWFNAXXXXXXXXXXXXXXXXXXXXXXXXXTYQGTSRNF 1165
            DYNSLYSRQDF+EGEDGELSWFNA                         TYQ TSRNF
Sbjct: 241  DYNSLYSRQDFIEGEDGELSWFNAGVRVGVGIGLGICVGVGLGVGLLVRTYQSTSRNF 298



to top

>AK106362:Os03g0775600 |
          Length = 231

 Score =  372 bits (955), Expect = e-103
 Identities = 185/226 (81%), Positives = 202/226 (89%)
 Frame = +2

Query: 275 MGDGVAFEAARKIIMHPLYASRSSPWLDLKVFYVRVSNCMVDESAPDHLTLNHIPLSPDT 454
           M D VAFE ARKIIMHPLY  RSSPWLDLKVFYVRVSNC VDESAPD LTLNHIPLSPDT
Sbjct: 1   MADEVAFETARKIIMHPLYTPRSSPWLDLKVFYVRVSNCEVDESAPDRLTLNHIPLSPDT 60

Query: 455 VIEVNGRRSSMHTEFVSSSLRRDRIDKKTEEATYVSTDSIRMTGSVRFQVFDKNDLLLTG 634
           VIEVNG+RSSMHTEF+SSSLRRDR+DK TEEAT+VSTDSIRMTGSVRFQVFDKNDLLLTG
Sbjct: 61  VIEVNGQRSSMHTEFISSSLRRDRVDKMTEEATFVSTDSIRMTGSVRFQVFDKNDLLLTG 120

Query: 635 DLELCNANGLVGEPKSSSKKWNIKCHSSASSSGFLKGKMSTGPDSAHPVVEVYVAGTFSG 814
           DLELC+ANG+VGE K+SSK+WN+KC  ++S +GFLKGK ST  +S HPV+EVY+AGTF G
Sbjct: 121 DLELCSANGVVGESKNSSKRWNMKCQPASSCNGFLKGKPSTASESVHPVIEVYLAGTFCG 180

Query: 815 TPIILTKTVQFISRRKSQMKLKLDSIPENEATELHTENSHGDSLKV 952
           TPIILTKTVQ ISRRKSQMKLKLDSIPENEATE   E  + DSL+V
Sbjct: 181 TPIILTKTVQHISRRKSQMKLKLDSIPENEATEQQKEELNEDSLQV 226



to top

>AK059414:Os03g0228200 |
          Length = 299

 Score =  128 bits (321), Expect = 1e-29
 Identities = 89/251 (35%), Positives = 132/251 (52%), Gaps = 11/251 (4%)
 Frame = +2

Query: 344  SPWLDLKVFYVRVSNCMVDESAPDHLTLNHIPLSPDTVIEVNGRRSSMHTEFVSSSLRRD 523
            S WL LKVF++RVS C V+ES  D +T+ H PL+PDTV+EV+G   + +      SLR D
Sbjct: 18   SSWLSLKVFFLRVSRCEVNESMLDSVTVTHAPLTPDTVLEVSGGSVASNGHV---SLRLD 74

Query: 524  R-------IDKKTEEATYVSTDSIRMTGSVRFQVFDKNDLLLTGDLELCNANGLVGEPKS 682
            R         +  +  T+VST  +R++GS RF V  + + L+ G L+  +A        +
Sbjct: 75   RAGGVGAAATEGGDSCTFVSTADVRVSGSARFDVQCRGERLVVGILDTRDAG-------A 127

Query: 683  SSKKWNIKCHSSASSSGFLKGKMSTGPDSAHPVVEVYVAGTFSGTPIILTKTVQFISRRK 862
                W +KC  +A     L  + S   ++  PVVEVYVAG   G P++ T+ +Q   RR+
Sbjct: 128  GGGGWVMKCQVAAQRGSGLVRRGS--KEAKPPVVEVYVAGLARGAPVVFTRAMQLRFRRR 185

Query: 863  SQMKLKLDSIPEN-EATELHTEN-SHGDSLKVSEFQDPKLETDMD--DYNSLYSRQDFLE 1030
              +K  ++ IPE+ E  E   E        +VSE++  K E D    DY+  Y +    E
Sbjct: 186  RHVKAFMEPIPEHGEPAEDSKETLPPKHETEVSEYRCYKPEQDAGDADYDGFYVKPAGEE 245

Query: 1031 GEDGELSWFNA 1063
             +DG+ SWF A
Sbjct: 246  DDDGDFSWFTA 256



to top

>AK062415:Os08g0151600 |
          Length = 248

 Score = 55.5 bits (132), Expect = 1e-07
 Identities = 58/190 (30%), Positives = 77/190 (40%), Gaps = 2/190 (1%)
 Frame = +2

Query: 500  VSSSLRRDRIDKKTEEATYVSTDSIRM-TGSVRFQVFD-KNDLLLTGDLELCNANGLVGE 673
            +S  LR DR D  + EATYVST S R+   S  F+V D +   LL G L  C        
Sbjct: 57   LSLPLRLDRRDPASGEATYVSTASARLPPPSAAFEVADHRGAALLRGSLRRC-----PDA 111

Query: 674  PKSSSKKWNIKCHSSASSSGFLKGKMSTGPDSAHPVVEVYVAGTFSGTPIILTKTVQFIS 853
               SS  W I C  +A            G ++     EVYVAG  +G P +LT  ++  +
Sbjct: 112  KPDSSPAWAIDCIPAA------------GAEAETSAFEVYVAGCCAGEPAVLTCALRLAT 159

Query: 854  RRKSQMKLKLDSIPENEATELHTENSHGDSLKVSEFQDPKLETDMDDYNSLYSRQDFLEG 1033
              + +    L            T N+ GD       Q P+           YS  D    
Sbjct: 160  PEEQKAAGGL------VRRRSPTSNAAGDEDVNGSIQHPE---------GWYSDDD---- 200

Query: 1034 EDGELSWFNA 1063
             DG+L+WFNA
Sbjct: 201  -DGQLTWFNA 209



to top

>AK066413:Os03g0333800 |
          Length = 421

 Score = 30.8 bits (68), Expect = 2.8
 Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
 Frame = -2

Query: 670 PDQSVGIAQLQVPGQQEVVLIKHLKPHA--PRHPYAVRADISGLLGLLVDPVPS 515
           P   + +A+ +VP    + + +H+   A    +PY V AD SGLL L   PV S
Sbjct: 30  PGTDISVARKEVPRASVLTVPRHISLPACLGLYPYVVAADRSGLLLLGTHPVTS 83



to top

>Os12g0511100:Os12g0511100 |
          Length = 314

 Score = 30.4 bits (67), Expect = 3.6
 Identities = 27/77 (35%), Positives = 31/77 (40%), Gaps = 10/77 (12%)
 Frame = +1

Query: 400 RVRAGPSHAQPHPAVPRHGHRGQRPAQQHAHRVRLVVT-QKGQDRQEDRGGHLCQH---- 564
           R R G   A+      R G RG R     A R R V   Q+ QDRQ+   G + QH    
Sbjct: 199 RPRRGQPEAESERERERRGRRGSRQPPARARRRRRVRRRQQRQDRQQRVLGKVLQHRPRH 258

Query: 565 -----GQHKDDGEREVS 600
                G H    ERE S
Sbjct: 259 RHRRQGLHHPATEREGS 275



to top

>AK070507:Os06g0252800 |
          Length = 333

 Score = 30.4 bits (67), Expect = 3.6
 Identities = 21/46 (45%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
 Frame = +1

Query: 364 GILCEGQQLYGGRVRAGPSHAQPHPAVPRHGHRGQRPAQQH--AHR 495
           G+L  G    GGR   GP+ A   P  PR  HRGQ P  +H  AHR
Sbjct: 30  GLLAGGDPRPGGR---GPAAALRSP--PRRRHRGQPPQVRHHVAHR 70



to top

>AK066809:Os09g0246200 |
          Length = 951

 Score = 30.4 bits (67), Expect = 3.6
 Identities = 18/55 (32%), Positives = 25/55 (45%), Gaps = 2/55 (3%)
 Frame = +1

Query: 394 GGRVRAGPSHAQPHPAVPRHGHRGQRPAQQHAHRVRLV--VTQKGQDRQEDRGGH 552
           G   R  PS + P PA  + GHR +    +H+     V    Q+G  R+  RG H
Sbjct: 108 GEIARGDPSVSAPAPAAGQEGHRRRSGRGKHSAEAMAVPAAGQEGHRRRSGRGKH 162



to top

>AB120431:Os09g0246200 |
          Length = 1017

 Score = 30.4 bits (67), Expect = 3.6
 Identities = 18/55 (32%), Positives = 25/55 (45%), Gaps = 2/55 (3%)
 Frame = +1

Query: 394 GGRVRAGPSHAQPHPAVPRHGHRGQRPAQQHAHRVRLV--VTQKGQDRQEDRGGH 552
           G   R  PS + P PA  + GHR +    +H+     V    Q+G  R+  RG H
Sbjct: 108 GEIARGDPSVSAPAPAAGQEGHRRRSGRGKHSAEAMAVPAAGQEGHRRRSGRGKH 162



to top

>AB096014:Os09g0246200 |
          Length = 1017

 Score = 30.4 bits (67), Expect = 3.6
 Identities = 18/55 (32%), Positives = 25/55 (45%), Gaps = 2/55 (3%)
 Frame = +1

Query: 394 GGRVRAGPSHAQPHPAVPRHGHRGQRPAQQHAHRVRLV--VTQKGQDRQEDRGGH 552
           G   R  PS + P PA  + GHR +    +H+     V    Q+G  R+  RG H
Sbjct: 108 GEIARGDPSVSAPAPAAGQEGHRRRSGRGKHSAEAMAVPAAGQEGHRRRSGRGKH 162



to top

>AK099755:Os02g0110600 |
          Length = 269

 Score = 30.0 bits (66), Expect = 4.7
 Identities = 21/59 (35%), Positives = 22/59 (37%)
 Frame = -2

Query: 292 GHPVAHLDLIISAPPLPRGSAAGVVIPLPAKGIDPWAAGSGRIATAHQPGGAEEVGADG 116
           GHP AH       PP P G   G   P+         AG G  A    PG A  V A G
Sbjct: 152 GHPGAHHGAAADPPPPPAGGGGGEPGPVGGAAAARQPAGGGGAA---GPGAAGAVPAGG 207



to top

>AK069727:Os02g0110600 |
          Length = 269

 Score = 30.0 bits (66), Expect = 4.7
 Identities = 21/59 (35%), Positives = 22/59 (37%)
 Frame = -2

Query: 292 GHPVAHLDLIISAPPLPRGSAAGVVIPLPAKGIDPWAAGSGRIATAHQPGGAEEVGADG 116
           GHP AH       PP P G   G   P+         AG G  A    PG A  V A G
Sbjct: 152 GHPGAHHGAAADPPPPPAGGGGGEPGPVGGAAAARQPAGGGGAA---GPGAAGAVPAGG 207



to top

>Os07g0567500:Os07g0567500 |
          Length = 478

 Score = 29.6 bits (65), Expect = 6.2
 Identities = 24/66 (36%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
 Frame = -3

Query: 1368 LRGTKMVGSAHKEASNTRAVAGGKNRRPHSSI-TSTGRKMGSQFPRRTR*IHAYICGMGS 1192
            LR  + + +  +  S    +AGG+NRR  S + T+TGR     FP   R       G GS
Sbjct: 329  LRRVEEIWNEWRGESREYEIAGGRNRRADSPVPTATGR-----FPMSRR------GGGGS 377

Query: 1191 VGHQGS 1174
             G QGS
Sbjct: 378  GGRQGS 383



to top

>Os04g0519100:Os04g0519100 |
          Length = 1382

 Score = 29.6 bits (65), Expect = 6.2
 Identities = 30/114 (26%), Positives = 46/114 (40%), Gaps = 14/114 (12%)
 Frame = +2

Query: 695 WNIKCHSSASSSGFLKGK-------MSTGPDSAHPVVEVYVAGTFSGTPIILTKTVQFIS 853
           W      + +  GF  GK        + GP++  PV     AG F+G P+  +     ++
Sbjct: 331 WQTGEERAVTEGGFFAGKPLPPSGGAARGPNAKKPVG----AGYFAGGPLPPSGRAAGLA 386

Query: 854 RRKSQMK-----LKLDSIPENEATELHTENSHGDSLKV--SEFQDPKLETDMDD 994
             K         + L SIP  +  E   E   G S      +FQDP ++ +MDD
Sbjct: 387 AYKRPAAQPPALILLSSIPVKKKEERGGEEKKGRSPAGFRRQFQDPGVQMNMDD 440



to top

>Os04g0688400:Os04g0688400 |
          Length = 318

 Score = 29.3 bits (64), Expect = 8.1
 Identities = 18/37 (48%), Positives = 18/37 (48%), Gaps = 4/37 (10%)
 Frame = +1

Query: 1261 ARASDRRVRPSVLPSRNRP----GIRCFLVCTANHFC 1359
            AR S RR RP V PSR  P      RC L   A H C
Sbjct: 106  ARPSHRRARPIVAPSRAPPLPSRSHRCPLASAAPHQC 142



to top

>AY224503:Os07g0673400 |
          Length = 173

 Score = 29.3 bits (64), Expect = 8.1
 Identities = 33/103 (32%), Positives = 46/103 (44%), Gaps = 5/103 (4%)
 Frame = +1

Query: 394 GGRVRAGPSHAQPHPAVPRHGHRGQRPAQ-QHAHRVRLVVTQKGQDRQEDRGGHLCQHGQ 570
           GGR RA    A    A P   H GQR  + +H  R  L V ++ + R+  RGG + + G+
Sbjct: 16  GGRQRAQQLRAGVDDAAPGERHGGQRRRRARHRPRQALAVLRR-RLRRRPRGGEI-RGGR 73

Query: 571 HKDDG---EREVSGV**ERPLADRGP-GAVQCQRTGRGAEEQQ 687
              DG    RE +     +   DRG     Q +   RG E Q+
Sbjct: 74  PAQDGGGCRREGAPPLHRQRGVDRGDRRGAQVRAVQRGGEAQR 116



to top

>AK111154: |
          Length = 961

 Score = 29.3 bits (64), Expect = 8.1
 Identities = 15/46 (32%), Positives = 19/46 (41%), Gaps = 3/46 (6%)
 Frame = +1

Query: 451 HGHRGQR---PAQQHAHRVRLVVTQKGQDRQEDRGGHLCQHGQHKD 579
           HGH  Q    PA  H     + V + G D Q      + QH  H+D
Sbjct: 765 HGHAHQMGGPPAGGHGEHAAIAVHESGLDAQASYAAPIAQHMYHED 810



to top

>AK107647: |
          Length = 318

 Score = 29.3 bits (64), Expect = 8.1
 Identities = 21/66 (31%), Positives = 26/66 (39%), Gaps = 13/66 (19%)
 Frame = +1

Query: 394 GGRVRAGPSHAQPHPAVPRHGHRGQRPAQQHAHRVRLVVTQK-------------GQDRQ 534
           G  V A P    P P  PR GH   +PAQ  A   RL + ++             G DR 
Sbjct: 206 GCAVGARPGRVLPRPQGPRLGHARAQPAQGLAKIARLGLARRVAQTPRGAAGARGGADRS 265

Query: 535 EDRGGH 552
           + R  H
Sbjct: 266 QPRLAH 271



to top

>AK105297:Os03g0859300 |
          Length = 383

 Score = 29.3 bits (64), Expect = 8.1
 Identities = 18/58 (31%), Positives = 26/58 (44%)
 Frame = -2

Query: 292 GHPVAHLDLIISAPPLPRGSAAGVVIPLPAKGIDPWAAGSGRIATAHQPGGAEEVGAD 119
           G+P  + D +I     P  S A    P P   ID  + G G+ ++ H+P      GAD
Sbjct: 24  GNPNPNGDAVIDTTSWPALSEAARNPPKPPPCIDSPSEGQGKQSSRHKPARRGGAGAD 81


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 45,432,814
Number of extensions: 1129850
Number of successful extensions: 4423
Number of sequences better than 10.0: 19
Number of HSP's gapped: 4412
Number of HSP's successfully gapped: 19
Length of query: 523
Length of database: 15,399,855
Length adjustment: 105
Effective length of query: 418
Effective length of database: 11,195,550
Effective search space: 4679739900
Effective search space used: 4679739900
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
to top