ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | FLbaf137g14 |
|---|---|
| Clone Library Name | barley_pub |
>Q689G6:PRR95_ORYSJ Two-component response regulator-like PRR95 - Oryza sativa subsp.| japonica (Rice) Length = 623 Score = 728 bits (1880), Expect = 0.0 Identities = 395/598 (66%), Positives = 439/598 (73%), Gaps = 25/598 (4%) Frame = +1 Query: 274 LPMMPVRVLLAEGDDSTRHVISALLRKCGYHVSAASDGVKAWELLKEKSFKIDLVLTEVE 453 LP MPVRVLLAEGDDSTRH+I ALLRKCGY V+AASDGVKAW++LKEKSF IDLVLTEVE Sbjct: 38 LPRMPVRVLLAEGDDSTRHIICALLRKCGYRVAAASDGVKAWDILKEKSFNIDLVLTEVE 97 Query: 454 LPSMSGFLLLSTIMEHDACKNIPVIMMSSNDAVSMVFKCMLKGAADFLVKPIRKNELRNL 633 LP MSGFLLLSTIMEHDACKNIPVIMMSSND+VSMVFKCMLKGAADFLVKPIRKNELRNL Sbjct: 98 LPLMSGFLLLSTIMEHDACKNIPVIMMSSNDSVSMVFKCMLKGAADFLVKPIRKNELRNL 157 Query: 634 WQHVWRKQLANGEIDVQQIQQEENVAEQHGRKTEATKAEHSTQNVVRKNRECSEQESDAQ 813 WQHVWRKQL++G +DVQ QQE+N+ E+H +KT TKAEH T+NVV KN ECSEQESDAQ Sbjct: 158 WQHVWRKQLSSGVLDVQHTQQEDNLTERHEQKTGVTKAEHVTENVVHKNMECSEQESDAQ 217 Query: 814 SSCTRSEPEAESKHTNSFLEFKQITERQ-SSTDPKNTVEN---------------RDPEN 945 SSCTRSE EA+S+ TN+ LE+KQ R S D KNT +N R E+ Sbjct: 218 SSCTRSELEADSRQTNNLLEYKQPMGRHFSKPDHKNTEKNGGTKIHASNDGNLIPRREED 277 Query: 946 PSENKR--------KKASTDIEVVHIIDDAPKPST-MEVDIVRTNSKGNGDKWFSIPAHQ 1098 S + +KAS D+E+VHIID+ K +T ME+D+ R NS+GN DK FSIPAHQ Sbjct: 278 ASLRRMTCSNDINCEKASRDMELVHIIDNQQKNNTHMEMDVARANSRGNDDKCFSIPAHQ 337 Query: 1099 LELSLRRSDYGRSEDQEKNDTRTLNHSTASAFSLYNCRPVSSFGNAGDAQPCSTSATHVD 1278 LELSLRRSDY R E QEKN+ RTLNHST+S FSLYNCR SS NAGDAQ CSTSATH+D Sbjct: 338 LELSLRRSDYSRLESQEKNERRTLNHSTSSPFSLYNCRTASSTINAGDAQACSTSATHID 397 Query: 1279 PANKNGNWAAPSQDKTHTTCHPIRVVPLPAPVGGLTFDGQPFWSGAPVAPLLYPQSGPPI 1458 NKNG+ PSQDK T PIRVVP P PVGGLTFDGQPFW+GAPVA L YPQS PPI Sbjct: 398 LENKNGDSKTPSQDKRETNQPPIRVVPFPVPVGGLTFDGQPFWNGAPVASLFYPQSAPPI 457 Query: 1459 WNSRTPVSQKADTQATSSQQKCQQNDPTEMDCQQTESTQLQEVLPPPIANEKHLHVEIPS 1638 WNS+T Q A TQA S QQN P + D +Q E+ + Q AN KHL +EIP+ Sbjct: 458 WNSKTSTWQDATTQAIS----LQQNGPKDTDTKQVENVEEQTARSHLSANRKHLRIEIPT 513 Query: 1639 DSNTQQVSPMTGESGSSTVXXXXXXXXXXXXXXXXXXXXRITTPTEQCNASDGATENPSM 1818 D + VSP TGESGSSTV + PTE N ENP Sbjct: 514 D-EPRHVSPTTGESGSSTV--LDSARKTLSGSVCDSSSNHMIAPTESSNV---VPENP-- 565 Query: 1819 EGLHHLSQREIALNKFRLKRKERCFEKKVRYQSRKLLAEQRPRVKGQFVRQDQSVQGS 1992 +GL HLSQRE ALNKFRLKRK+RCFEKKVRYQSRKLLAEQRPRVKGQFVRQD VQGS Sbjct: 566 DGLRHLSQREAALNKFRLKRKDRCFEKKVRYQSRKLLAEQRPRVKGQFVRQDHGVQGS 623
>Q6LA42:APRR5_ARATH Two-component response regulator-like APRR5 - Arabidopsis thaliana| (Mouse-ear cress) Length = 558 Score = 283 bits (725), Expect = 2e-75 Identities = 217/588 (36%), Positives = 292/588 (49%), Gaps = 17/588 (2%) Frame = +1 Query: 274 LPMMPVRVLLAEGDDSTRHVISALLRKCGYHVSAASDGVKAWELLKEKSFKIDLVLTEVE 453 LP + +RVLL E DDSTR +I+ALLRKC Y V+A DG+KAWE+LK K +DL+LTEV+ Sbjct: 45 LPKIALRVLLVEADDSTRQIIAALLRKCSYRVAAVPDGLKAWEMLKGKPESVDLILTEVD 104 Query: 454 LPSMSGFLLLSTIMEHDACKNIPVIMMSSNDAVSMVFKCMLKGAADFLVKPIRKNELRNL 633 LPS+SG+ LL+ IMEHD CKNIPVIMMS+ D+V+ V+KCMLKGAAD+LVKP+R+NELRNL Sbjct: 105 LPSISGYALLTLIMEHDICKNIPVIMMSTQDSVNTVYKCMLKGAADYLVKPLRRNELRNL 164 Query: 634 WQHVWRKQLANGEIDVQQIQQEENVAEQHGRKTEATKAEHSTQNVVRKNRECSEQESDAQ 813 WQHVWR+Q + + E+V +Q K E A +S N R + S DAQ Sbjct: 165 WQHVWRRQTS---LAPDSFPWNESVGQQ---KAEGASANNS--NGKRDDHVVSGNGGDAQ 216 Query: 814 SSCTRSEPEAESKHTNSFLEFKQITERQSSTDPKNTVENRDPENPSENKRKKASTDIEVV 993 SSCTR E E ES + + + + + N E R N ++K+ +A Sbjct: 217 SSCTRPEMEGESADVE--VSARDAVQMECAKSQFN--ETRLLANELQSKQAEA------- 265 Query: 994 HIIDDAPKPSTMEVDIVRTNSKGNGDKWFSIPAH-QLELSLRRSDYGRSEDQEKNDTRTL 1170 ID M RT + + + +L+LSLRR + SE+Q D +L Sbjct: 266 --ID------FMGASFRRTGRRNREESVAQYESRIELDLSLRRPN--ASENQSSGDRPSL 315 Query: 1171 NHSTASAFSLYNCRPVSSFGNAGDAQPCSTSATHVDPANKNGNWAAPSQD------KTHT 1332 + S+ASAF+ Y RP+ + CS S D KN A SQD + Sbjct: 316 HPSSASAFTRYVHRPLQT--------QCSASPVVTD-QRKN---VAASQDDNIVLMNQYN 363 Query: 1333 TCHPIRVVPLPAPVGGLTFDGQPFWSGAPVAPLLYPQSGPPIWNSRTPVSQKADTQATSS 1512 T P P AP T F++GA GPP N ++ + Sbjct: 364 TSEP----PPNAPRRNDT----SFYTGA-------DSPGPPFSNQLNSWPGQSSYPTPTP 408 Query: 1513 QQKCQQNDPTEMDCQQTESTQLQEVLPPPIANEKHLHVEIPSDSNTQQVSPMTGESGSST 1692 Q DP + T + + P P + H + + N++ + Sbjct: 409 INNIQFRDP---NTAYTSAMAPASLSPSPSSVSPHEYSSMFHPFNSKPEGLQDRDCSMDV 465 Query: 1693 VXXXXXXXXXXXXXXXXXXXXRITTPTEQC---NASDGATENPSMEG-------LHHLSQ 1842 +++ TE N D E + +G + Q Sbjct: 466 -----------------DERRYVSSATEHSAIGNHIDQLIEKKNEDGYSLSVGKIQQSLQ 508 Query: 1843 REIALNKFRLKRKERCFEKKVRYQSRKLLAEQRPRVKGQFVRQDQSVQ 1986 RE AL KFR+KRK+RC+EKKVRY+SRK LAEQRPR+KGQFVRQ QS Q Sbjct: 509 REAALTKFRMKRKDRCYEKKVRYESRKKLAEQRPRIKGQFVRQVQSTQ 556
>Q689G8:PRR37_ORYSA Two-component response regulator-like PRR37 - Oryza sativa (Rice)| Length = 742 Score = 212 bits (539), Expect = 7e-54 Identities = 211/687 (30%), Positives = 291/687 (42%), Gaps = 120/687 (17%) Frame = +1 Query: 289 VRVLLAEGDDSTRHVISALLRKCGYHVSAASDGVKAWELLKEKSFKIDLVLTEVELPSMS 468 ++VLL + DDSTR V+SALLR C Y V A +G +AW L++ IDLVLTEV +P +S Sbjct: 62 IKVLLVDSDDSTRQVVSALLRHCMYEVIPAENGQQAWTYLEDMQNSIDLVLTEVVMPGVS 121 Query: 469 GFLLLSTIMEHDACKNIPVIMMSSNDAVSMVFKCMLKGAADFLVKPIRKNELRNLWQHVW 648 G LLS IM H+ CKNIPVIMMSSNDA+ VFKC+ KGA DFLVKPIRKNEL+NLWQHVW Sbjct: 122 GISLLSRIMNHNICKNIPVIMMSSNDAMGTVFKCLSKGAVDFLVKPIRKNELKNLWQHVW 181 Query: 649 RK-QLANGEIDVQQIQQEENVAEQHGRKTEATKAEHSTQN----VVRKN-RECSEQES-- 804 R+ ++G IQ ++ + G ++ + + ++ N R+ S+ S Sbjct: 182 RRCHSSSGSGSESGIQTQKCAKSKSGDESNNNNGSNDDDDDDGVIMGLNARDGSDNGSGT 241 Query: 805 DAQSSCTRSEPEAESK--------------------HTNSFL---EFKQITERQSSTDPK 915 AQSS T+ E +S H S + + T ++S K Sbjct: 242 QAQSSWTKRAVEIDSPQAMSPDQLADPPDSTCAQVIHLKSDICSNRWLPCTSNKNSKKQK 301 Query: 916 NT--------VENRDPEN------PSENKRKKASTDIEVVHIIDDAPKPSTME------- 1032 T +E P N S N+R TD + + + K + ME Sbjct: 302 ETNDDFKGKDLEIGSPRNLNTAYQSSPNERSIKPTDRRNEYPLQNNSKEAAMENLEESSV 361 Query: 1033 --VDIVRTNSKGNGDKWFSIPAH---------------------QLELSLRRS---DYGR 1134 D++ + +K + + A+ LELSL+RS G Sbjct: 362 RAADLIGSMAKNMDAQQAARAANAPNCSSKVPEGKDKNRDNIMPSLELSLKRSRSTGDGA 421 Query: 1135 SEDQEKNDTRTLNHSTASAFSLYNCRPVSSFGNAGDAQPCS-----------------TS 1263 + QE+ L S SAF+ Y+ S+ G G CS S Sbjct: 422 NAIQEE-QRNVLRRSDLSAFTRYHTPVASNQGGTGFMGSCSLHDNSSEAMKTDSAYNMKS 480 Query: 1264 ATHVDPANKNGNWAAPSQDKTHTTCHPI--------RVV-PLPAPVGGLTFDGQPFWSGA 1416 + P + N ++ + D TT + + RV+ P G T P Sbjct: 481 NSDAAPIKQGSNGSSNNNDMGSTTKNVVTKPSTNKERVMSPSAVKANGHTSAFHPAQHWT 540 Query: 1417 PVAPLLYPQSGPPIWNSRTPVSQKADTQATSSQQKCQQNDPTEMDCQQTESTQ------L 1578 A + + N+ +Q + Q+ Q D + Sbjct: 541 SPANTTGKEKTDEVANNAAKRAQPGEVQSNLVQHPRPILHYVHFDVSRENGGSGAPQCGS 600 Query: 1579 QEVLPPPIANEKHLHVEIPSDSNTQQVSPMTGESGSSTVXXXXXXXXXXXXXXXXXXXXR 1758 V PP+ E H + SN+ + G++GS+T Sbjct: 601 SNVFDPPV--EGHAANYGVNGSNSGSNNGSNGQNGSTTA------------VNAERPNME 646 Query: 1759 ITTPTEQCNASDGATENPSMEG----LHHLSQRE---IALNKFRLKRKERCFEKKVRYQS 1917 I T + G + S G L +QRE A+ KFR KRKER F KKVRYQS Sbjct: 647 IANGTINKSGPGGGNGSGSGSGNDMYLKRFTQREHRVAAVIKFRQKRKERNFGKKVRYQS 706 Query: 1918 RKLLAEQRPRVKGQFVR---QDQSVQG 1989 RK LAEQRPRV+GQFVR QDQ QG Sbjct: 707 RKRLAEQRPRVRGQFVRQAVQDQQQQG 733
>Q8L500:APRR9_ARATH Two-component response regulator-like APRR9 - Arabidopsis thaliana| (Mouse-ear cress) Length = 468 Score = 193 bits (491), Expect = 2e-48 Identities = 125/310 (40%), Positives = 169/310 (54%) Frame = +1 Query: 274 LPMMPVRVLLAEGDDSTRHVISALLRKCGYHVSAASDGVKAWELLKEKSFKIDLVLTEVE 453 LP +RVLL E D STR +I+ALLRKC Y V A SDG+ AWE+LKEKS IDL+LTE++ Sbjct: 32 LPKTVLRVLLVESDYSTRQIITALLRKCCYKVVAVSDGLAAWEVLKEKSHNIDLILTELD 91 Query: 454 LPSMSGFLLLSTIMEHDACKNIPVIMMSSNDAVSMVFKCMLKGAADFLVKPIRKNELRNL 633 LPS+SGF LL+ +MEH+ACKNIPVIMMSS D++ MV KCML+GAAD+L+KP+RKNEL+NL Sbjct: 92 LPSISGFALLALVMEHEACKNIPVIMMSSQDSIKMVLKCMLRGAADYLIKPMRKNELKNL 151 Query: 634 WQHVWRKQLANGEIDVQQIQQEENVAEQHGRKTEATKAEHSTQNVVRKNRECSEQESDAQ 813 WQHVWR+ D + A QH + T +R S+Q S AQ Sbjct: 152 WQHVWRRLTLR---DDPTAHAQSLPASQHNLE--------DTDETCEDSRYHSDQGSGAQ 200 Query: 814 SSCTRSEPEAESKHTNSFLEFKQITERQSSTDPKNTVENRDPENPSENKRKKASTDIEVV 993 + ++ ++ E S D E K + D+ + Sbjct: 201 AI--------------NYNGHNKLMENGKSVD--------------ERDEFKETFDVTMD 232 Query: 994 HIIDDAPKPSTMEVDIVRTNSKGNGDKWFSIPAHQLELSLRRSDYGRSEDQEKNDTRTLN 1173 I +P ++ D R G +L LSL+RS E+Q+++ + L+ Sbjct: 233 LIGGIDKRPDSIYKDKSRDECVG----------PELGLSLKRSCSVSFENQDESKHQKLS 282 Query: 1174 HSTASAFSLY 1203 S ASAFS + Sbjct: 283 LSDASAFSRF 292 Score = 86.3 bits (212), Expect = 6e-16 Identities = 60/175 (34%), Positives = 83/175 (47%) Frame = +1 Query: 1444 SGPPIWNSRTPVSQKADTQATSSQQKCQQNDPTEMDCQQTESTQLQEVLPPPIANEKHLH 1623 SG P +TP + +S Q + + + + +VL + N+K Sbjct: 310 SGEP----KTPTESHEKLRKVTSDQGSATTSSNQENIGSSSVSFRNQVLQSTVTNQKQ-D 364 Query: 1624 VEIPSDSNTQQVSPMTGESGSSTVXXXXXXXXXXXXXXXXXXXXRITTPTEQCNASDGAT 1803 IP +SN ++ + E+GS + Q ++++ Sbjct: 365 SPIPVESNREKAASKEVEAGSQSTNEGIAG---------------------QSSSTEKPK 403 Query: 1804 ENPSMEGLHHLSQREIALNKFRLKRKERCFEKKVRYQSRKLLAEQRPRVKGQFVR 1968 E S + SQRE AL KFRLKRK+RCF+KKVRYQSRK LAEQRPRVKGQFVR Sbjct: 404 EEESAKQRWSRSQREAALMKFRLKRKDRCFDKKVRYQSRKKLAEQRPRVKGQFVR 458
>Q9LVG4:APRR3_ARATH Two-component response regulator-like APRR3 - Arabidopsis thaliana| (Mouse-ear cress) Length = 495 Score = 179 bits (453), Expect = 6e-44 Identities = 120/339 (35%), Positives = 183/339 (53%), Gaps = 28/339 (8%) Frame = +1 Query: 274 LPMMPVRVLLAEGDDSTRHVISALLRKCGYHVSAASDGVKAWELLKEKSFKIDLVLTEVE 453 LP+ ++VLL E DDSTRH+++ALL+ C Y V+A D ++AW +L+++ IDLVLTEV+ Sbjct: 59 LPVRSLKVLLVENDDSTRHIVTALLKNCSYEVTAVPDVLEAWRILEDEKSCIDLVLTEVD 118 Query: 454 LPSMSGFLLLSTIMEHDACKNIPVIMMSSNDAVSMVFKCMLKGAADFLVKPIRKNELRNL 633 +P SG LLS IM H KNIPVIMMSS+D++ +VFKC+ GA DFLVKPIRKNEL+NL Sbjct: 119 MPVHSGTGLLSKIMSHKTLKNIPVIMMSSHDSMVLVFKCLSNGAVDFLVKPIRKNELKNL 178 Query: 634 WQHVWRK-QLANGEIDVQQIQQEENVAEQ--HGRKTEAT-----KAEHSTQNVVRKNREC 789 WQHVWR+ ++G I +++V + G + +A+ + E + + Sbjct: 179 WQHVWRRCHSSSGSGSESGIHDKKSVKPESTQGSENDASISDEHRNESGSSGGLSNQDGG 238 Query: 790 SEQESDAQSSCTRSEPEAESKHTNSFLEFKQITERQSSTDPKNTVENRDPENPSENKRKK 969 S+ S QSS T+ +++K T+ +F ++ + + NR E +E+++++ Sbjct: 239 SDNGSGTQSSWTKR--ASDTKSTSPSNQFPDAPNKKGTYENGCAHVNRLKE--AEDQKEQ 294 Query: 970 ASTDIEV-VHIIDDAPKPSTMEV-------------DIVRTNSKGNGDKWFSIPA----- 1092 T + + + A +P +E D S GN P+ Sbjct: 295 IGTGSQTGMSMSKKAEEPGDLEKNAKYSVQALERNNDDTLNRSSGNSQVESKAPSSNRED 354 Query: 1093 -HQLELSLRRSDYGRSEDQEKNDTRTLNHSTASAFSLYN 1206 LE +L+++ R D + D L HS SAFS YN Sbjct: 355 LQSLEQTLKKTREDR--DYKVGDRSVLRHSNLSAFSKYN 391 Score = 81.6 bits (200), Expect = 1e-14 Identities = 45/80 (56%), Positives = 54/80 (67%), Gaps = 4/80 (5%) Frame = +1 Query: 1765 TPTEQCNASDGATENPSME---GLHHLSQREIALNKFRLKRKERCFEKKVRYQSRKLLAE 1935 +P + S +++NP + G +QRE AL KFRLKRKERCFEKKVRY SRK LAE Sbjct: 413 SPIAKLLGSSSSSDNPLKQQSSGSDRWAQREAALMKFRLKRKERCFEKKVRYHSRKKLAE 472 Query: 1936 QRPRVKGQFVR-QDQSVQGS 1992 QRP VKGQF+R +D GS Sbjct: 473 QRPHVKGQFIRKRDDHKSGS 492
>Q689G4:PRR73_ORYSA Two-component response regulator-like PRR73 - Oryza sativa (Rice)| Length = 767 Score = 171 bits (432), Expect = 2e-41 Identities = 114/281 (40%), Positives = 151/281 (53%), Gaps = 28/281 (9%) Frame = +1 Query: 274 LPMMPVRVLLAEGDDSTRHVISALLRKCGYHVSAASDGVKAWELLKEKSFKIDLVLTEVE 453 LP+ +RVLL E DDSTR V+SALLRKC Y V A +G+ AW+ L++ IDLVLTEV Sbjct: 76 LPVKTLRVLLVENDDSTRQVVSALLRKCCYEVIPAENGLHAWQCLEDLQNHIDLVLTEVV 135 Query: 454 LPSMSGFLLLSTIMEHDACKNIPVIMMSSNDAVSMVFKCMLKGAADFLVKPIRKNELRNL 633 +P +SG LLS I H CK+IPVIMMSSND++ VFKC+ KGA DFLVKPIRKNEL+NL Sbjct: 136 MPRLSGIGLLSKITSHKICKDIPVIMMSSNDSMGTVFKCLSKGAVDFLVKPIRKNELKNL 195 Query: 634 WQHVWRK-QLANGEIDVQQI------------QQEENVAEQHGRKTEATKAEHSTQNVVR 774 WQHVWR+ ++G I + E N + + + E V Sbjct: 196 WQHVWRRCHSSSGSGSESGIRTQKCTKPKVDDEYENNSGSNNDNEDDDDNDEDDDDLSVG 255 Query: 775 KN-RECSEQESDAQSSCTRSEPEAESKHTNSFLEFKQITERQSSTDPKNT---------- 921 N R+ S+ S QSS T+ E +S +Q++ Q S P +T Sbjct: 256 HNARDGSDNGSGTQSSWTKRAVEIDSP--------QQMSPDQPSDLPDSTCAQVIHPTSE 307 Query: 922 -VENR--DPENPSENKRKKASTDIEVVHIID-DAPKPSTME 1032 NR N K+ K + D + ++ AP+ S+ME Sbjct: 308 ICSNRWLPTANKRSGKKHKENNDDSMGKYLEIGAPRNSSME 348 Score = 72.8 bits (177), Expect = 6e-12 Identities = 110/448 (24%), Positives = 156/448 (34%), Gaps = 49/448 (10%) Frame = +1 Query: 775 KNRECSEQESDAQSSCTRSEPEAESKHTNSFLEFKQITERQSSTDPKNTVENRDPENPSE 954 +N Q S + S +E + E+ S + TD +NT + Sbjct: 343 RNSSMEYQSSPREMSVNPTEKQHETLMPQS--------KTTRETDSRNTQNEPTTQTVDL 394 Query: 955 NKRKKASTDIEVVHIIDDAPKPSTMEVDIVRTNSKGNGDKWFSIPAHQLELSLRRSDYGR 1134 STD + V I++AP S+ D + N D + + EL L+R Sbjct: 395 ISSIARSTDDKQVVRINNAPDCSSKVPD----GNDKNRDSLIDMTSE--ELGLKRLKTTG 448 Query: 1135 SEDQEKNDTRTLNHSTASAFSLYNCRPVSSFGNAGDAQPC-------------------- 1254 S + ++ L S SAF+ Y+ S+ G AG C Sbjct: 449 SATEIHDERNILKRSDLSAFTRYHTTVASNQGGAGFGGSCSPQDNSSEALKTDSNCKVKS 508 Query: 1255 ----------------------STSATHVDPANKNGNWAAPSQDKT--HTTC-HPIRVVP 1359 ST P++ G +PS K HT+ HP++ Sbjct: 509 NSDAAEIKQGSNGSSNNNDMGSSTKNAITKPSSNRGKVISPSAVKATQHTSAFHPVQRQT 568 Query: 1360 LPAPVGGLTFDGQPFWSGAPVAPLLYPQSGPPIWNSRTPVSQKADTQATSSQQKCQQNDP 1539 PA V G + +G V + Q+ V QQ + Sbjct: 569 SPANVVGKDKVDEGIANGVNVGHPVDVQNS--FMQHHHHVHYYVHVMTQQQQQPSIERGS 626 Query: 1540 TEMDCQQTESTQLQEVLPPPIANEKHLHVEIPSDSNTQQVSPMTGESGSSTVXXXXXXXX 1719 ++ C + V PPI E H + S + + G+ G ST Sbjct: 627 SDAQCGSSN------VFDPPI--EGHAANYSVNGSFSGGHNGNNGQRGPSTAPNVGRPNM 678 Query: 1720 XXXXXXXXXXXXRITTPTEQCNASDGATENPSMEG----LHHLSQREIALNKFRLKRKER 1887 N + G + S G + + RE ALNKFR KRK R Sbjct: 679 ETVNGIVDE------------NGAGGGNGSGSGSGNDLYQNGVCYREAALNKFRQKRKVR 726 Query: 1888 CFEKKVRYQSRKLLAEQRPRVKGQFVRQ 1971 F KKVRYQSRK LAEQRPR++GQFVRQ Sbjct: 727 NFGKKVRYQSRKRLAEQRPRIRGQFVRQ 754
>Q93WK5:APRR7_ARATH Two-component response regulator-like APRR7 - Arabidopsis thaliana| (Mouse-ear cress) Length = 727 Score = 160 bits (404), Expect = 3e-38 Identities = 86/196 (43%), Positives = 131/196 (66%), Gaps = 5/196 (2%) Frame = +1 Query: 274 LPMMPVRVLLAEGDDSTRHVISALLRKCGYHVSAASDGVKAWELLKEKSFKIDLVLTEVE 453 L + +RVLL E DD TR++++ALLR C Y V AS+G++AW++L++ + ID+VLTEV Sbjct: 73 LHVRTIRVLLVENDDCTRYIVTALLRNCSYEVVEASNGIQAWKVLEDLNNHIDIVLTEVI 132 Query: 454 LPSMSGFLLLSTIMEHDACKNIPVIMMSSNDAVSMVFKCMLKGAADFLVKPIRKNELRNL 633 +P +SG LL I+ H + +NIPVIMMSS+D++ +VFKC+ KGA DFLVKPIRKNEL+ L Sbjct: 133 MPYLSGIGLLCKILNHKSRRNIPVIMMSSHDSMGLVFKCLSKGAVDFLVKPIRKNELKIL 192 Query: 634 WQHVWRK-QLANGE-IDVQQIQQEENVAEQHGRKTE---ATKAEHSTQNVVRKNRECSEQ 798 WQHVWR+ Q ++G + Q +++V + +K++ + E+ ++ + S Sbjct: 193 WQHVWRRCQSSSGSGSESGTHQTQKSVKSKSIKKSDQDSGSSDENENGSIGLNASDGSSD 252 Query: 799 ESDAQSSCTRSEPEAE 846 S AQSS T+ + + Sbjct: 253 GSGAQSSWTKKAVDVD 268 Score = 79.0 bits (193), Expect = 9e-14 Identities = 38/46 (82%), Positives = 41/46 (89%) Frame = +1 Query: 1834 LSQREIALNKFRLKRKERCFEKKVRYQSRKLLAEQRPRVKGQFVRQ 1971 +SQRE AL KFR KRKERCF KKVRYQSRK LAEQRPRV+GQFVR+ Sbjct: 666 ISQREAALTKFRQKRKERCFRKKVRYQSRKKLAEQRPRVRGQFVRK 711
>Q689G9:PRR1_ORYSJ Two-component response regulator-like PRR1 - Oryza sativa subsp.| japonica (Rice) Length = 518 Score = 113 bits (283), Expect = 3e-24 Identities = 93/351 (26%), Positives = 168/351 (47%), Gaps = 4/351 (1%) Frame = +1 Query: 289 VRVLLAEGDDSTRHVISALLRKCGYHVSAASDGVKAWELLKEKSFKIDLVLTEVELPSMS 468 VR+LL + D S+ + LL C Y V+ A + +L ++ +ID++L EV+LP Sbjct: 28 VRILLCDSDPSSSREVLRLLCNCSYQVTCAKSPRQVINVLNCEAGEIDIILAEVDLPVSK 87 Query: 469 GFLLLSTIMEHDACKNIPVIMMSSNDAVSMVFKCMLKGAADFLVKPIRKNELRNLWQHVW 648 F +L I + ++IP+IMMS+ D VS+V KC+ GAA++LVKP+R NEL NLW HVW Sbjct: 88 CFKMLKYIARNKELRHIPIIMMSNRDEVSVVVKCLRLGAAEYLVKPLRMNELLNLWTHVW 147 Query: 649 RKQLANGEIDVQQIQQEENVAEQHGRKTEATKAEHSTQNVVRKNRECSEQESDAQSSCTR 828 R++ G + +A +E + A ++ ++ + + +E+ Q + T Sbjct: 148 RRRRMLGLSEKNFFNDNFELA-----LSEPSDANTNSTTLLSDDTDDKPKENINQETSTS 202 Query: 829 SEPEAESKHTNSFLEFKQITE-RQSSTDPKNTVENRDP--ENPSENKRKKASTDIEVVHI 999 ++ E ES +++ + K E ST+ + + P + + A + + ++ Sbjct: 203 NQHEYESNPSDAEPKQKGTPEGLLVSTEGGDQASSPGVMFSRPIKTNLRVAESSAFLAYV 262 Query: 1000 IDDAPKPSTMEVDIVRTNSKGNGDKWFSIPAHQLELSLRRSDYGRSEDQEKNDTRT-LNH 1176 P S+ + ++ KG ++L+ S R ++ + D ++DT T +N Sbjct: 263 KSSTPTTSSFDSEL----QKG---------GNRLDSSDHRGNFSSTTD--RSDTGTDVNI 307 Query: 1177 STASAFSLYNCRPVSSFGNAGDAQPCSTSATHVDPANKNGNWAAPSQDKTH 1329 AF + PV F S+S H++ +N+ N A+ + H Sbjct: 308 RDKEAFEMPVQYPVVCF---------SSSNLHLERSNEGQNDASGTPPVYH 349 Score = 71.6 bits (174), Expect = 1e-11 Identities = 39/68 (57%), Positives = 45/68 (66%) Frame = +1 Query: 1768 PTEQCNASDGATENPSMEGLHHLSQREIALNKFRLKRKERCFEKKVRYQSRKLLAEQRPR 1947 PT+ +T P E +R AL KFRLKRKERCF+KKVRY +RK LAE RPR Sbjct: 419 PTQNMWPQASSTPMPE-ETCSRSERRAAALAKFRLKRKERCFDKKVRYVNRKKLAETRPR 477 Query: 1948 VKGQFVRQ 1971 V+GQFVRQ Sbjct: 478 VRGQFVRQ 485
>P62598:ARR12_ARATH Two-component response regulator ARR12 - Arabidopsis thaliana| (Mouse-ear cress) Length = 596 Score = 106 bits (265), Expect = 4e-22 Identities = 61/191 (31%), Positives = 99/191 (51%), Gaps = 3/191 (1%) Frame = +1 Query: 271 ALPMMPV--RVLLAEGDDSTRHVISALLRKCGYHVSAASDGVKAWELLKEKSFKIDLVLT 444 AL PV RVL + D + ++ +LLR C YHV+ + KA ELL+E K DLV++ Sbjct: 9 ALDQFPVGMRVLAVDDDQTCLKILESLLRHCQYHVTTTNQAQKALELLRENKNKFDLVIS 68 Query: 445 EVELPSMSGFLLLSTI-MEHDACKNIPVIMMSSNDAVSMVFKCMLKGAADFLVKPIRKNE 621 +V++P M GF LL + +E D +PVIM+S++ V K + GA D+L+KP+R E Sbjct: 69 DVDMPDMDGFKLLELVGLEMD----LPVIMLSAHSDPKYVMKGVTHGACDYLLKPVRIEE 124 Query: 622 LRNLWQHVWRKQLANGEIDVQQIQQEENVAEQHGRKTEATKAEHSTQNVVRKNRECSEQE 801 L+N+WQHV R + + + + ++ + + + + N + E Sbjct: 125 LKNIWQHVVRSRFDKNRGSNNNGDKRDGSGNEGVGNSDPNNGKGNRKRKDQYNEDEDEDR 184 Query: 802 SDAQSSCTRSE 834 D SC + + Sbjct: 185 DDNDDSCAQKK 195
>O49397:ARR10_ARATH Two-component response regulator ARR10 - Arabidopsis thaliana| (Mouse-ear cress) Length = 552 Score = 106 bits (265), Expect = 4e-22 Identities = 63/189 (33%), Positives = 100/189 (52%), Gaps = 1/189 (0%) Frame = +1 Query: 289 VRVLLAEGDDSTRHVISALLRKCGYHVSAASDGVKAWELLKEKSFKIDLVLTEVELPSMS 468 +RVL + D + ++ LL++C YHV+ + A ELL+E K DLV+++V++P M Sbjct: 17 MRVLAVDDDQTCLRILQTLLQRCQYHVTTTNQAQTALELLRENKNKFDLVISDVDMPDMD 76 Query: 469 GFLLLSTI-MEHDACKNIPVIMMSSNDAVSMVFKCMLKGAADFLVKPIRKNELRNLWQHV 645 GF LL + +E D +PVIM+S++ V K + GA D+L+KP+R EL+N+WQHV Sbjct: 77 GFKLLELVGLEMD----LPVIMLSAHSDPKYVMKGVKHGACDYLLKPVRIEELKNIWQHV 132 Query: 646 WRKQLANGEIDVQQIQQEENVAEQHGRKTEATKAEHSTQNVVRKNRECSEQESDAQSSCT 825 RK + + NV+ G +A RK +E E+E + + Sbjct: 133 VRKSKLK--------KNKSNVSNGSGNCDKAN----------RKRKEQYEEEEEEERGND 174 Query: 826 RSEPEAESK 852 +P A+ K Sbjct: 175 NDDPTAQKK 183
>Q9LKL2:APRR1_ARATH Two-component response regulator-like APRR1 - Arabidopsis thaliana| (Mouse-ear cress) Length = 618 Score = 106 bits (264), Expect = 5e-22 Identities = 51/123 (41%), Positives = 74/123 (60%) Frame = +1 Query: 289 VRVLLAEGDDSTRHVISALLRKCGYHVSAASDGVKAWELLKEKSFKIDLVLTEVELPSMS 468 VR+LL + D ++ + LL +C Y V+A + + L + ID++L E++LP Sbjct: 19 VRILLCDNDSTSLGEVFTLLSECSYQVTAVKSARQVIDALNAEGPDIDIILAEIDLPMAK 78 Query: 469 GFLLLSTIMEHDACKNIPVIMMSSNDAVSMVFKCMLKGAADFLVKPIRKNELRNLWQHVW 648 G +L I + IPVIMMS D V +V KC+ GAAD+LVKP+R NEL NLW H+W Sbjct: 79 GMKMLRYITRDKDLRRIPVIMMSRQDEVPVVVKCLKLGAADYLVKPLRTNELLNLWTHMW 138 Query: 649 RKQ 657 R++ Sbjct: 139 RRR 141 Score = 68.6 bits (166), Expect = 1e-10 Identities = 33/53 (62%), Positives = 42/53 (79%) Frame = +1 Query: 1825 LHHLSQREIALNKFRLKRKERCFEKKVRYQSRKLLAEQRPRVKGQFVRQDQSV 1983 ++ L +RE AL KFR KR +RCF+KK+RY +RK LAE+RPRVKGQFVR+ V Sbjct: 527 VNKLDRREEALLKFRRKRNQRCFDKKIRYVNRKRLAERRPRVKGQFVRKMNGV 579
>Q9ZWJ9:ARR2_ARATH Two-component response regulator ARR2 - Arabidopsis thaliana| (Mouse-ear cress) Length = 664 Score = 103 bits (257), Expect = 3e-21 Identities = 64/192 (33%), Positives = 102/192 (53%), Gaps = 4/192 (2%) Frame = +1 Query: 289 VRVLLAEGDDSTRHVISALLRKCGYHVSAASDGVKAWELLKEKSFKIDLVLTEVELPSMS 468 +RVL+ + D + ++ +L C Y V+ + A LL++ D+V+++V +P M Sbjct: 28 LRVLVVDDDPTCLMILERMLMTCLYRVTKCNRAESALSLLRKNKNGFDIVISDVHMPDMD 87 Query: 469 GFLLLSTI-MEHDACKNIPVIMMSSNDAVSMVFKCMLKGAADFLVKPIRKNELRNLWQHV 645 GF LL + +E D +PVIMMS++D+ S+V K + GA D+L+KP+R L+N+WQHV Sbjct: 88 GFKLLEHVGLEMD----LPVIMMSADDSKSVVLKGVTHGAVDYLIKPVRIEALKNIWQHV 143 Query: 646 WRKQLANGEIDVQQIQQEENVAEQHGRKTEATKAEHSTQNVVRK---NRECSEQESDAQS 816 RK+ + E NV+E G E T + Q R+ N S E + +S Sbjct: 144 VRKK-----------RNEWNVSEHSGGSIEDTGGDRDRQQQHREDADNNSSSVNEGNGRS 192 Query: 817 SCTRSEPEAESK 852 S R E E + + Sbjct: 193 SRKRKEEEVDDQ 204
>Q9FGT7:ARR18_ARATH Two-component response regulator ARR18 - Arabidopsis thaliana| (Mouse-ear cress) Length = 635 Score = 97.4 bits (241), Expect = 2e-19 Identities = 56/183 (30%), Positives = 94/183 (51%) Frame = +1 Query: 289 VRVLLAEGDDSTRHVISALLRKCGYHVSAASDGVKAWELLKEKSFKIDLVLTEVELPSMS 468 +RVL + + + + LL +C YHV+ + KA E+L+E S DLV+++VE+P Sbjct: 18 MRVLAVDDNPTCLRKLEELLLRCKYHVTKTMESRKALEMLRENSNMFDLVISDVEMPDTD 77 Query: 469 GFLLLSTIMEHDACKNIPVIMMSSNDAVSMVFKCMLKGAADFLVKPIRKNELRNLWQHVW 648 GF LL +E D +PVIM+S++ V K ++ GA D+LVKP+ EL+N+W HV Sbjct: 78 GFKLLEIGLEMD----LPVIMLSAHSDYDSVMKGIIHGACDYLVKPVGLKELQNIWHHVV 133 Query: 649 RKQLANGEIDVQQIQQEENVAEQHGRKTEATKAEHSTQNVVRKNRECSEQESDAQSSCTR 828 +K + + + ++V ++ + + R+ + E D S TR Sbjct: 134 KKNI-KSYAKLLPPSESDSVPSASRKRKDKVNDSGDEDDSDREEDDGEGSEQDGDGSGTR 192 Query: 829 SEP 837 +P Sbjct: 193 KKP 195
>Q940D0:ARR1_ARATH Two-component response regulator ARR1 - Arabidopsis thaliana| (Mouse-ear cress) Length = 690 Score = 95.5 bits (236), Expect = 9e-19 Identities = 57/187 (30%), Positives = 100/187 (53%), Gaps = 3/187 (1%) Frame = +1 Query: 289 VRVLLAEGDDSTRHVISALLRKCGYHVSAASDGVKAWELLKEKSFKIDLVLTEVELPSMS 468 +RVL+ + D + ++ +LR C Y V+ + A LL++ D+V+++V +P M Sbjct: 37 LRVLVVDDDPTCLMILERMLRTCLYEVTKCNRAEMALSLLRKNKHGFDIVISDVHMPDMD 96 Query: 469 GFLLLSTI-MEHDACKNIPVIMMSSNDAVSMVFKCMLKGAADFLVKPIRKNELRNLWQHV 645 GF LL + +E D +PVIMMS++D+ S+V K + GA D+L+KP+R L+N+WQHV Sbjct: 97 GFKLLEHVGLEMD----LPVIMMSADDSKSVVLKGVTHGAVDYLIKPVRMEALKNIWQHV 152 Query: 646 WRKQLANGEIDVQ--QIQQEENVAEQHGRKTEATKAEHSTQNVVRKNRECSEQESDAQSS 819 RK+ + + I++ +Q R A ++ V N + ++ +SS Sbjct: 153 VRKRRSEWSVPEHSGSIEETGERQQQQHRGGGGGAAVSGGEDAVDDNSSSVNEGNNWRSS 212 Query: 820 CTRSEPE 840 + + E Sbjct: 213 SRKRKDE 219
>Q9FXD6:ARR11_ARATH Two-component response regulator ARR11 - Arabidopsis thaliana| (Mouse-ear cress) Length = 521 Score = 92.8 bits (229), Expect = 6e-18 Identities = 50/125 (40%), Positives = 77/125 (61%), Gaps = 1/125 (0%) Frame = +1 Query: 289 VRVLLAEGDDSTRHVISALLRKCGYHVSAASDGVKAWELLKEKSFKIDLVLTEVELPSMS 468 +RVL+ + D + ++ +L+KC Y V+ +A LL+E+ D+V+++V +P M Sbjct: 11 LRVLVVDDDPTWLKILEKMLKKCSYEVTTCGLAREALRLLRERKDGYDIVISDVNMPDMD 70 Query: 469 GFLLLSTI-MEHDACKNIPVIMMSSNDAVSMVFKCMLKGAADFLVKPIRKNELRNLWQHV 645 GF LL + +E D +PVIMMS + S V K + GA D+L+KPIR EL+ +WQHV Sbjct: 71 GFKLLEHVGLELD----LPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELKIIWQHV 126 Query: 646 WRKQL 660 RK+L Sbjct: 127 LRKKL 131
>Q8L9Y3:ARR14_ARATH Two-component response regulator ARR14 - Arabidopsis thaliana| (Mouse-ear cress) Length = 382 Score = 89.0 bits (219), Expect = 9e-17 Identities = 57/172 (33%), Positives = 92/172 (53%), Gaps = 2/172 (1%) Frame = +1 Query: 289 VRVLLAEGDDSTRHVISALLRKCGYHVSAASDGVKAWELLKEKSFKIDLVLTEVELPSMS 468 +R+L+ + D S ++ +L + Y V+ S A +L+E+ DLVL++V +P M+ Sbjct: 11 LRILVVDDDTSCLFILEKMLLRLMYQVTICSQADVALTILRERKDSFDLVLSDVHMPGMN 70 Query: 469 GFLLLSTI--MEHDACKNIPVIMMSSNDAVSMVFKCMLKGAADFLVKPIRKNELRNLWQH 642 G+ LL + +E D +PVIMMS + + V + GA D+L+KPIR EL+N+WQH Sbjct: 71 GYNLLQQVGLLEMD----LPVIMMSVDGRTTTVMTGINHGACDYLIKPIRPEELKNIWQH 126 Query: 643 VWRKQLANGEIDVQQIQQEENVAEQHGRKTEATKAEHSTQNVVRKNRECSEQ 798 V R++ + ++E + Q E K S + VV ECSE+ Sbjct: 127 VVRRKC---------VMKKELRSSQ---ALEDNKNSGSLETVVVSVSECSEE 166
>Q23917:REGA_DICDI 3',5'-cyclic-nucleotide phosphodiesterase regA - Dictyostelium| discoideum (Slime mold) Length = 793 Score = 88.2 bits (217), Expect = 1e-16 Identities = 68/221 (30%), Positives = 111/221 (50%), Gaps = 16/221 (7%) Frame = +1 Query: 289 VRVLLAEGDDSTRHVISALLRKCGYHVSAASDGVKAWELLKEKSFKIDLVLTEVELPSMS 468 VR+L+A+ DD R +++ LL+K Y+V+ +G AWE + + K DLVLT+V +P ++ Sbjct: 160 VRILVADDDDVQRKILNNLLKKFHYNVTLVPNGEIAWEYINKGQQKYDLVLTDVMMPHIT 219 Query: 469 GFLLLSTIMEHDACKNIPVIMMS--------SNDAVSMVFKCMLKGAADFLVKPIRKNEL 624 GF LL I +H ++IPVI+MS +ND + + G DFL KPI K L Sbjct: 220 GFDLLQRINDHPVHRHIPVILMSGTAVDYKYANDTIKI-------GGQDFLTKPIAKELL 272 Query: 625 R----NLWQHVWRKQLANGEIDVQQIQQEENVAEQHGRKTEATKAEHSTQNVVRKNRECS 792 + + Q +W+++ E + QE + ++ E EH + + +K + S Sbjct: 273 KKKIDTVLQSIWQRR--KEEEYKATLAQEREKGNKLAKEMEL--KEHEIEELTKKVSKMS 328 Query: 793 EQESDAQS----SCTRSEPEAESKHTNSFLEFKQITERQSS 903 +A S TR+ E + + S E +I E+ SS Sbjct: 329 SISKEAMESPLVSVTRNIEELLKQSSWSHYE-SEIKEKLSS 368
>O82798:ARR4_ARATH Two-component response regulator ARR4 - Arabidopsis thaliana| (Mouse-ear cress) Length = 259 Score = 76.6 bits (187), Expect = 4e-13 Identities = 47/142 (33%), Positives = 80/142 (56%), Gaps = 10/142 (7%) Frame = +1 Query: 274 LPMMPVRVLLAEGDDSTRHVISALLRKCGYHVSAASDGVKAWELL---KEKS------FK 426 L + V VL + R VI LLR V+A G +A E L EK+ K Sbjct: 29 LDLDEVHVLAVDDSLVDRIVIERLLRITSCKVTAVDSGWRALEFLGLDNEKASAEFDRLK 88 Query: 427 IDLVLTEVELPSMSGFLLLSTIMEHDACKNIPVIMMSSNDAVSMVFKCMLKGAADFLVKP 606 +DL++T+ +P M+G+ LL I E + +PV++MSS + ++ + +C+ +GA DFL+KP Sbjct: 89 VDLIITDYCMPGMTGYELLKKIKESSNFREVPVVIMSSENVLTRIDRCLEEGAQDFLLKP 148 Query: 607 IRKNELRNLWQHVWRK-QLANG 669 ++ +++ L H+ + +L+NG Sbjct: 149 VKLADVKRLRSHLTKDVKLSNG 170
>Q9ZWS6:ARR6_ARATH Two-component response regulator ARR6 - Arabidopsis thaliana| (Mouse-ear cress) Length = 186 Score = 75.5 bits (184), Expect = 1e-12 Identities = 46/161 (28%), Positives = 85/161 (52%), Gaps = 10/161 (6%) Frame = +1 Query: 286 PVRVLLAEGDDSTRHVISALLRKCGYHVSAASDGVKAWELL----KEKS-----FKIDLV 438 P+ VL + R I LLR V+ +A + L +EKS K++L+ Sbjct: 24 PLHVLAVDDSHVDRKFIERLLRVSSCKVTVVDSATRALQYLGLDVEEKSVGFEDLKVNLI 83 Query: 439 LTEVELPSMSGFLLLSTIMEHDACKNIPVIMMSSNDAVSMVFKCMLKGAADFLVKPIRKN 618 +T+ +P M+G+ LL I E A + +PV++MSS + + + +C+ +GA DFL+KP++ + Sbjct: 84 MTDYSMPGMTGYELLKKIKESSAFREVPVVIMSSENILPRIDRCLEEGAEDFLLKPVKLS 143 Query: 619 ELRNLWQHVWRKQLANGEIDVQQIQQE-ENVAEQHGRKTEA 738 +++ L + + + + +Q+ + E ENV H + A Sbjct: 144 DVKRLRDSLMKVEDLSFTKSIQKRELETENVYPVHSQLKRA 184
>Q9ZWS9:ARR3_ARATH Two-component response regulator ARR3 - Arabidopsis thaliana| (Mouse-ear cress) Length = 231 Score = 73.6 bits (179), Expect = 4e-12 Identities = 42/130 (32%), Positives = 72/130 (55%), Gaps = 9/130 (6%) Frame = +1 Query: 289 VRVLLAEGDDSTRHVISALLRKCGYHVSAASDGVKAWELL---------KEKSFKIDLVL 441 V VL + R VI LLR V+A G +A E L + K+DL++ Sbjct: 33 VHVLAVDDSLVDRIVIERLLRITSCKVTAVDSGWRALEFLGLDDDKAAVEFDRLKVDLII 92 Query: 442 TEVELPSMSGFLLLSTIMEHDACKNIPVIMMSSNDAVSMVFKCMLKGAADFLVKPIRKNE 621 T+ +P M+G+ LL I E + K +PV++MSS + ++ + +C+ +GA DFL+KP++ + Sbjct: 93 TDYCMPGMTGYELLKKIKESTSFKEVPVVIMSSENVMTRIDRCLEEGAEDFLLKPVKLAD 152 Query: 622 LRNLWQHVWR 651 ++ L ++ R Sbjct: 153 VKRLRSYLTR 162
>Q9FJ16:APRR4_ARATH Putative two-component response regulator-like APRR4 - Arabidopsis| thaliana (Mouse-ear cress) Length = 292 Score = 73.2 bits (178), Expect = 5e-12 Identities = 50/192 (26%), Positives = 92/192 (47%) Frame = +1 Query: 289 VRVLLAEGDDSTRHVISALLRKCGYHVSAASDGVKAWELLKEKSFKIDLVLTEVELPSMS 468 +RVL+ + D S ++ L+K Y V+ ++ KA L+ + DL + +V Sbjct: 42 LRVLVFDEDPSYLLILERHLQKFQYQVTICNEVNKAMHTLRNHRNRFDLAMIQVNNAEGD 101 Query: 469 GFLLLSTIMEHDACKNIPVIMMSSNDAVSMVFKCMLKGAADFLVKPIRKNELRNLWQHVW 648 F LS I ++P+I++S +D+V V K M+ GAAD+L+KPIR +LR +++H+ Sbjct: 102 IFRFLSEIGSE---MDLPIIIISEDDSVKSVKKWMINGAADYLIKPIRPEDLRIVFKHL- 157 Query: 649 RKQLANGEIDVQQIQQEENVAEQHGRKTEATKAEHSTQNVVRKNRECSEQESDAQSSCTR 828 V+++++ +V K K+ + +R +SSC Sbjct: 158 ----------VKKMRERRSVVTGEAEKAAGEKSSSVGDSTIR------NPNKSKRSSCLE 201 Query: 829 SEPEAESKHTNS 864 +E E +H ++ Sbjct: 202 AEVNEEDRHDHN 213
>O80366:ARR9_ARATH Two-component response regulator ARR9 - Arabidopsis thaliana| (Mouse-ear cress) Length = 234 Score = 71.6 bits (174), Expect = 1e-11 Identities = 43/153 (28%), Positives = 80/153 (52%), Gaps = 22/153 (14%) Frame = +1 Query: 313 DDST--RHVISALLRKCGYHVSAASDGVKAWELL-------------------KEKSFKI 429 DDS R +I LL+K V+ G KA E L + ++ Sbjct: 15 DDSLFDRKLIERLLQKSSCQVTTVDSGSKALEFLGLRQSTDSNDPNAFSKAPVNHQVVEV 74 Query: 430 DLVLTEVELPSMSGFLLLSTIMEHDACKNIPVIMMSSNDAVSMVFKCMLKGAADFLVKPI 609 +L++T+ +P M+G+ LL + E A ++IPV++MSS + + + +C+ +GA +F +KP+ Sbjct: 75 NLIITDYCMPGMTGYDLLKKVKESSAFRDIPVVIMSSENVPARISRCLEEGAEEFFLKPV 134 Query: 610 RKNELRNLWQHVWRKQLANGEI-DVQQIQQEEN 705 R +L L H+ + +L N ++ +++ + EN Sbjct: 135 RLADLNKLKPHMMKTKLKNQKLEEIETTSKVEN 167
>Q9ZWS7:ARR7_ARATH Two-component response regulator ARR7 - Arabidopsis thaliana| (Mouse-ear cress) Length = 206 Score = 71.6 bits (174), Expect = 1e-11 Identities = 38/132 (28%), Positives = 71/132 (53%), Gaps = 9/132 (6%) Frame = +1 Query: 289 VRVLLAEGDDSTRHVISALLRKCGYHVSAASDGVKAWELL---------KEKSFKIDLVL 441 + VL + R VI LLR V+ G +A + L K K++L++ Sbjct: 24 LHVLAVDDSIVDRKVIERLLRISSCKVTTVESGTRALQYLGLDGGKGASNLKDLKVNLIV 83 Query: 442 TEVELPSMSGFLLLSTIMEHDACKNIPVIMMSSNDAVSMVFKCMLKGAADFLVKPIRKNE 621 T+ +P +SG+ LL I E A + +PV++MSS + + + +C+ +GA +FL+KP++ + Sbjct: 84 TDYSMPGLSGYDLLKKIKESSAFREVPVVIMSSENILPRIQECLKEGAEEFLLKPVKLAD 143 Query: 622 LRNLWQHVWRKQ 657 ++ + Q + R + Sbjct: 144 VKRIKQLIMRNE 155
>O23100:APRR8_ARATH Putative two-component response regulator-like APRR8 - Arabidopsis| thaliana (Mouse-ear cress) Length = 367 Score = 71.6 bits (174), Expect = 1e-11 Identities = 62/236 (26%), Positives = 109/236 (46%), Gaps = 5/236 (2%) Frame = +1 Query: 295 VLLAEGDDSTRHVISALLRKCGYHVSAASDGVKAWELLKEKSFKIDLVLTEVELPSMSGF 474 VLL + D + +S ++RKCGY V A + ++ K KIDLVL E L M+ + Sbjct: 16 VLLLDSDATCLANLSEMIRKCGYKVVATTRADDLPLIINNKDKKIDLVLAEFRLIEMNKY 75 Query: 475 LLLSTIMEHDACKNIPVIMMSSNDAVSMVFKCMLKGAADFLVKPIRKNELRNLWQH-VWR 651 LL I C+ IPV+ +S + +C+ +GA L KP+ +N+ + LWQ V R Sbjct: 76 ELLEKI--RSICE-IPVV-VSGAHVKDAIVECLCRGAKLCLEKPLMENDFKILWQFTVSR 131 Query: 652 KQLANGEIDVQQIQQEENVAEQHGRKTEATK----AEHSTQNVVRKNRECSEQESDAQSS 819 ++ +ID+ ++ ++ E K +E T+++ + E + + + Sbjct: 132 QRNFRSQIDINPPEKNHSITHTQSLGAELKKNNNNSEVETEDLDKYKDELGQGNKRKERA 191 Query: 820 CTRSEPEAESKHTNSFLEFKQITERQSSTDPKNTVENRDPENPSENKRKKASTDIE 987 T + E K+ S L ++ + + D +N P N +KA T+I+ Sbjct: 192 DTDTGEHTE-KNNGSDLGDQKKPKLLFADDLQNETLEAVPNIEEANNERKAPTEIK 246
>Q7G8V2:ARR15_ARATH Two-component response regulator ARR15 - Arabidopsis thaliana| (Mouse-ear cress) Length = 206 Score = 71.2 bits (173), Expect = 2e-11 Identities = 42/173 (24%), Positives = 87/173 (50%), Gaps = 13/173 (7%) Frame = +1 Query: 289 VRVLLAEGDDSTRHVISALLRKCGYHVSAASDGVKAWELLKE---------KSFKIDLVL 441 + VL + R VI LL+ V+ G +A + L K K++L++ Sbjct: 18 LHVLAVDDSFVDRKVIERLLKISACKVTTVESGTRALQYLGLDGDNGSSGLKDLKVNLIV 77 Query: 442 TEVELPSMSGFLLLSTIMEHDACKNIPVIMMSSNDAVSMVFKCMLKGAADFLVKPIRKNE 621 T+ +P ++G+ LL I E A + IPV++MSS + + +CM++GA +FL+KP++ + Sbjct: 78 TDYSMPGLTGYELLKKIKESSALREIPVVIMSSENIQPRIEQCMIEGAEEFLLKPVKLAD 137 Query: 622 LRNLWQHVWR----KQLANGEIDVQQIQQEENVAEQHGRKTEATKAEHSTQNV 768 ++ L + + R ++ ++ ++I Q + + T ++ + H ++ Sbjct: 138 VKRLKELIMRGGEAEEGKTKKLSPKRILQNDIDSSPSSSSTSSSSSSHDVSSL 190
>Q9M9B9:ARR19_ARATH Putative two-component response regulator ARR19 - Arabidopsis| thaliana (Mouse-ear cress) Length = 407 Score = 70.5 bits (171), Expect = 3e-11 Identities = 35/122 (28%), Positives = 68/122 (55%) Frame = +1 Query: 295 VLLAEGDDSTRHVISALLRKCGYHVSAASDGVKAWELLKEKSFKIDLVLTEVELPSMSGF 474 VL+ + + +T + ++++ Y VS +D KA L +I++V+ + +P + G Sbjct: 36 VLVVDTNFTTLLNMKQIMKQYAYQVSIETDAEKALAFLTSCKHEINIVIWDFHMPGIDGL 95 Query: 475 LLLSTIMEHDACKNIPVIMMSSNDAVSMVFKCMLKGAADFLVKPIRKNELRNLWQHVWRK 654 L +I ++PV++MS ++ V K GA D++VKP+++ + N+WQH+ RK Sbjct: 96 QALKSITSK---LDLPVVIMSDDNQTESVMKATFYGACDYVVKPVKEEVMANIWQHIVRK 152 Query: 655 QL 660 +L Sbjct: 153 RL 154
>Q9LZJ8:ARR20_ARATH Putative two-component response regulator ARR20 - Arabidopsis| thaliana (Mouse-ear cress) Length = 426 Score = 70.1 bits (170), Expect = 4e-11 Identities = 40/129 (31%), Positives = 70/129 (54%) Frame = +1 Query: 292 RVLLAEGDDSTRHVISALLRKCGYHVSAASDGVKAWELLKEKSFKIDLVLTEVELPSMSG 471 RVLL D ++ + L+ + Y V+ G +A L + +IDLV+ + +P ++G Sbjct: 42 RVLLVGADSNSS--LKNLMTQYSYQVTKYESGEEAMAFLMKNKHEIDLVIWDFHMPDING 99 Query: 472 FLLLSTIMEHDACKNIPVIMMSSNDAVSMVFKCMLKGAADFLVKPIRKNELRNLWQHVWR 651 L+ I + ++PV++MS V + + GA DFLVKP+ K + LW+HV+R Sbjct: 100 LDALNIIGKQ---MDLPVVIMSHEYKKETVMESIKYGACDFLVKPVSKEVIAVLWRHVYR 156 Query: 652 KQLANGEID 678 K+++ +D Sbjct: 157 KRMSKSGLD 165
>O80365:ARR8_ARATH Two-component response regulator ARR8 - Arabidopsis thaliana| (Mouse-ear cress) Length = 225 Score = 67.4 bits (163), Expect = 3e-10 Identities = 57/212 (26%), Positives = 100/212 (47%), Gaps = 20/212 (9%) Frame = +1 Query: 313 DDST--RHVISALLRKCGYHVSAASDGVKAWELLK-----------------EKSFKIDL 435 DDS R +I LL+K V+ G KA E L + +I+L Sbjct: 15 DDSLFDRKMIERLLQKSSCQVTTVDSGSKALEFLGLRVDDNDPNALSTSPQIHQEVEINL 74 Query: 436 VLTEVELPSMSGFLLLSTIMEHDACKNIPVIMMSSNDAVSMVFKCMLKGAADFLVKPIRK 615 ++T+ +P M+G+ LL + E A ++IPV++MSS + + + +C+ +GA +F +KP++ Sbjct: 75 IITDYCMPGMTGYDLLKKVKESAAFRSIPVVIMSSENVPARISRCLEEGAEEFFLKPVKL 134 Query: 616 NELRNLWQHVWRKQLANGEIDVQQIQQEENVAEQHGRKTEATKAEHSTQNVVRKNREC-S 792 +L L H+ + +L + + + EE V + + E + E S ++ ++E S Sbjct: 135 ADLTKLKPHMMKTKLK--KESEKPVAIEEIVVSK--PEIEEEEEESSVIEILPLHQEIES 190 Query: 793 EQESDAQSSCTRSEPEAESKHTNSFLEFKQIT 888 EQ SS R E S ++ IT Sbjct: 191 EQLEPMLSSNKRKAMEEVVSTDRSRPKYNDIT 222
>Q9APD9:ZRAR_KLEOX Transcriptional regulatory protein zraR - Klebsiella oxytoca| Length = 443 Score = 65.9 bits (159), Expect = 8e-10 Identities = 38/113 (33%), Positives = 68/113 (60%) Frame = +1 Query: 289 VRVLLAEGDDSTRHVISALLRKCGYHVSAASDGVKAWELLKEKSFKIDLVLTEVELPSMS 468 V +L+ + D S ++ ALLR GY V+ A++G++A E ++EK F DLVL ++ + M Sbjct: 6 VDILVVDDDISHCTILQALLRGWGYRVALANNGLQALEKVREKVF--DLVLCDIRMAEMD 63 Query: 469 GFLLLSTIMEHDACKNIPVIMMSSNDAVSMVFKCMLKGAADFLVKPIRKNELR 627 G L I + +IPV++M++ +V + + GA D+L+KP+ ++L+ Sbjct: 64 GIETLKEIKTFN--PSIPVLIMTAYSSVDTAVEALKSGALDYLIKPLDFDKLQ 114
>Q9SB04:ARR5_ARATH Two-component response regulator ARR5 - Arabidopsis thaliana| (Mouse-ear cress) Length = 184 Score = 65.9 bits (159), Expect = 8e-10 Identities = 37/125 (29%), Positives = 65/125 (52%), Gaps = 10/125 (8%) Frame = +1 Query: 289 VRVLLAEGDDSTRHVISALLRKCGYHVSAASDGVKAWELLKE----------KSFKIDLV 438 + VL + R I LLR V+ +A + L + KI+L+ Sbjct: 25 LHVLAVDDSMVDRKFIERLLRVSSCKVTVVDSATRALQYLGLDGENNSSVGFEDLKINLI 84 Query: 439 LTEVELPSMSGFLLLSTIMEHDACKNIPVIMMSSNDAVSMVFKCMLKGAADFLVKPIRKN 618 +T+ +P M+G+ LL I E A + IPV++MSS + + + +C+ +GA DFL+KP++ Sbjct: 85 MTDYSMPGMTGYELLKKIKESSAFREIPVVIMSSENILPRIDRCLEEGAEDFLLKPVKLA 144 Query: 619 ELRNL 633 +++ L Sbjct: 145 DVKRL 149
>Q6LA43:APRR2_ARATH Two-component response regulator-like APRR2 - Arabidopsis thaliana| (Mouse-ear cress) Length = 535 Score = 63.9 bits (154), Expect = 3e-09 Identities = 60/257 (23%), Positives = 107/257 (41%), Gaps = 18/257 (7%) Frame = +1 Query: 304 AEGDDSTRHVISALLRKCGYHVSAASDGVKAWELLKEKSFKIDLVLTEVELPSMS-GFLL 480 ++GD S+ + L Y V+ +D +A + + + + EV + + S F Sbjct: 29 SDGDGSSAAETRSELESMDYIVTTFTDETEALSAVVKNPESFHIAIVEVNMSAESESFKF 88 Query: 481 LSTIMEHDACKNI-PVIMMSSNDAVSMVFKCMLKGAADFLVKPIRKNELRNLWQHVWRKQ 657 L +A K++ P IM+S++ ++ KC+ GA +FL KP+ +L+N+WQHV K Sbjct: 89 L------EAAKDVLPTIMISTDHCITTTMKCIALGAVEFLQKPLSPEKLKNIWQHVVHKA 142 Query: 658 LANG--EIDVQQIQQEENVAEQHGRKTEATKAEH----STQNVVRKNR----ECSEQESD 807 +G + + +E+V +T+ T E ST + + +R +C E + Sbjct: 143 FNDGGSNVSISLKPVKESVVSMLHLETDMTIEEKDPAPSTPQLKQDSRLLDGDCQENINF 202 Query: 808 AQSSCTRSEPEAESKHTNSFLEFKQITERQSSTDPKNTV---ENRDPENPSENKRK---K 969 + + S + + E K + D V E D E E + Sbjct: 203 SMENVNSSTEKDNMEDHQDIGESKSVDTTNRKLDDDKVVVKEERGDSEKEEEGETGDLIS 262 Query: 970 ASTDIEVVHIIDDAPKP 1020 TD +H +D KP Sbjct: 263 EKTDSVDIHKKEDETKP 279
>Q9C9F6:APRR6_ARATH Putative two-component response regulator-like APRR6 - Arabidopsis| thaliana (Mouse-ear cress) Length = 663 Score = 63.5 bits (153), Expect = 4e-09 Identities = 50/228 (21%), Positives = 107/228 (46%), Gaps = 1/228 (0%) Frame = +1 Query: 289 VRVLLAEGDDSTRHVISALLRKCGYHVSAASDGVKAWELLKEKSFKIDLVLTEVELPSMS 468 + +LL + D ++ ++++L++ V + KA +++++ +I L++ +E+P + Sbjct: 13 ISILLIDHDTASIASLTSMLQQFSKRVMSVDVASKALSMIEKQKKEIGLIIANIEMPHID 72 Query: 469 GFLLLSTIMEHDACKNIPVIMMSSNDAVSMVFKCMLKGAADFLVKPIRKNELRNLWQHVW 648 L+ ++ K+IP+I+++ + K A L KPI ++++N+WQHV+ Sbjct: 73 SHSFLNALL----LKDIPLILINPEIKTKEPSDLLTKRACFSLDKPISNDDIKNMWQHVF 128 Query: 649 RKQLANGEIDVQQIQQEENVAEQHGRKTEATKAEHSTQNVVRKNRECSEQESDAQSSCTR 828 K+ + + + +ENV ++ + EA +A Q + +Q+S Sbjct: 129 SKKSQELK-KINITEDQENVMDKDTYQIEAFRANLKRQRI-------------SQASLLG 174 Query: 829 SEPEAESKHT-NSFLEFKQITERQSSTDPKNTVENRDPENPSENKRKK 969 P ++ T +F + K I + T P +E ENKRK+ Sbjct: 175 RRPFIDTFSTYETFQKRKSIANVEWKTTPSYAIE-------IENKRKE 215
>Q9FPR6:ARR17_ARATH Two-component response regulator ARR17 - Arabidopsis thaliana| (Mouse-ear cress) Length = 153 Score = 62.8 bits (151), Expect = 7e-09 Identities = 34/129 (26%), Positives = 68/129 (52%), Gaps = 10/129 (7%) Frame = +1 Query: 289 VRVLLAEGDDSTRHVISALLRKCGYHVSAASDGVKAWELLK----------EKSFKIDLV 438 + VL + + R ++ +L+ V+ A +G++A E L K++L+ Sbjct: 20 LHVLAVDDNLIDRKLVERILKISSCKVTTAENGLRALEYLGLGDPQQTDSLTNVMKVNLI 79 Query: 439 LTEVELPSMSGFLLLSTIMEHDACKNIPVIMMSSNDAVSMVFKCMLKGAADFLVKPIRKN 618 +T+ +P M+GF LL + E K +PV+++SS + + + KC+ GA F+ KP++ + Sbjct: 80 ITDYCMPGMTGFELLKKVKESSNLKEVPVVILSSENIPTRINKCLASGAQMFMQKPLKLS 139 Query: 619 ELRNLWQHV 645 ++ L H+ Sbjct: 140 DVEKLKCHL 148
>Q8X613:ZRAR_ECO57 Transcriptional regulatory protein zraR - Escherichia coli O157:H7| Length = 441 Score = 62.0 bits (149), Expect = 1e-08 Identities = 37/113 (32%), Positives = 65/113 (57%) Frame = +1 Query: 289 VRVLLAEGDDSTRHVISALLRKCGYHVSAASDGVKAWELLKEKSFKIDLVLTEVELPSMS 468 + +L+ + D S ++ ALLR GY+V+ A+ G +A E ++E+ F DLVL +V + M Sbjct: 6 IDILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVRERVF--DLVLCDVRMAEMD 63 Query: 469 GFLLLSTIMEHDACKNIPVIMMSSNDAVSMVFKCMLKGAADFLVKPIRKNELR 627 G L I + IPV++M++ +V + + GA D+L+KP+ + L+ Sbjct: 64 GIATLKEIKALNPA--IPVLIMTAYSSVETAVEALKTGALDYLIKPLDFDNLQ 114
>P14375:ZRAR_ECOLI Transcriptional regulatory protein zraR - Escherichia coli| Length = 441 Score = 61.6 bits (148), Expect = 1e-08 Identities = 37/113 (32%), Positives = 65/113 (57%) Frame = +1 Query: 289 VRVLLAEGDDSTRHVISALLRKCGYHVSAASDGVKAWELLKEKSFKIDLVLTEVELPSMS 468 + +L+ + D S ++ ALLR GY+V+ A+ G +A E ++E+ F DLVL +V + M Sbjct: 6 IDILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVREQVF--DLVLCDVRMAEMD 63 Query: 469 GFLLLSTIMEHDACKNIPVIMMSSNDAVSMVFKCMLKGAADFLVKPIRKNELR 627 G L I + IPV++M++ +V + + GA D+L+KP+ + L+ Sbjct: 64 GIATLKEIKALNPA--IPVLIMTAYSSVETAVEALKTGALDYLIKPLDFDNLQ 114
>Q45994:CTRA_CAUCR Cell cycle transcriptional regulator ctrA - Caulobacter crescentus| (Caulobacter vibrioides) Length = 231 Score = 61.2 bits (147), Expect = 2e-08 Identities = 42/159 (26%), Positives = 76/159 (47%), Gaps = 4/159 (2%) Frame = +1 Query: 289 VRVLLAEGDDSTRHVISALLRKCGYHVSAASDGVKAWELLKEKSFKIDLVLTEVELPSMS 468 +RVLL E D +T I +L+ G++V G + +L K + DL+L ++ LP MS Sbjct: 1 MRVLLIEDDSATAQTIELMLKSEGFNVYTTDLGEEGVDL--GKIYDYDLILLDLNLPDMS 58 Query: 469 GFLLLSTIMEHDACKNIPVIMMSSNDAVSMVFKCMLKGAADFLVKPIRKNELRNLWQHVW 648 G +L T+ A N P++++S + + K GA D++ KP K+E+ V Sbjct: 59 GIDVLRTLRV--AKINTPIMILSGSSEIDTKVKTFAGGADDYMTKPFHKDEMIARIHAVV 116 Query: 649 RKQLANGEIDVQQ----IQQEENVAEQHGRKTEATKAEH 753 R+ + + ++ + + E +G + T E+ Sbjct: 117 RRSKGHAQSVIKTGDIVVNLDAKTVEVNGNRVHLTGKEY 155
>P96126:CHEY_TREPA Chemotaxis protein cheY - Treponema pallidum| Length = 144 Score = 60.5 bits (145), Expect = 3e-08 Identities = 38/114 (33%), Positives = 60/114 (52%), Gaps = 1/114 (0%) Frame = +1 Query: 286 PVRVLLAEGDDSTRHVISALLRKCGYHVS-AASDGVKAWELLKEKSFKIDLVLTEVELPS 462 P RVL+ + I +L GY V+ A DGV E K S +DLV ++ +P Sbjct: 24 PYRVLVVDDSMFVSKQIGQILTSEGYEVADTAVDGVDGVEKYKAMSPGVDLVTMDITMPK 83 Query: 463 MSGFLLLSTIMEHDACKNIPVIMMSSNDAVSMVFKCMLKGAADFLVKPIRKNEL 624 M G L I+E D KN V+++S+ +V K +L GA +++VKP+ + ++ Sbjct: 84 MDGITALEKILEFD--KNAKVVIISALGKEELVKKALLLGAKNYIVKPLDRKKV 135
>Q9M9B3:COL8_ARATH Putative zinc finger protein CONSTANS-LIKE 8 - Arabidopsis thaliana| (Mouse-ear cress) Length = 313 Score = 58.5 bits (140), Expect = 1e-07 Identities = 29/67 (43%), Positives = 44/67 (65%) Frame = +1 Query: 1783 NASDGATENPSMEGLHHLSQREIALNKFRLKRKERCFEKKVRYQSRKLLAEQRPRVKGQF 1962 N S P +E S+RE + ++R KRK R FEKK+RY+ RK+ A++RPR+KG+F Sbjct: 245 NTSSFQLVPPGIEEKRVRSEREARVWRYRDKRKNRLFEKKIRYEVRKVNADKRPRMKGRF 304 Query: 1963 VRQDQSV 1983 VR+ ++ Sbjct: 305 VRRSLAI 311
>P25852:ZRAR_SALTY Transcriptional regulatory protein zraR - Salmonella typhimurium| Length = 441 Score = 58.2 bits (139), Expect = 2e-07 Identities = 36/113 (31%), Positives = 62/113 (54%) Frame = +1 Query: 289 VRVLLAEGDDSTRHVISALLRKCGYHVSAASDGVKAWELLKEKSFKIDLVLTEVELPSMS 468 + +L+ + D S ++ ALLR GY+V+ A G A ++EK F DLVL +V + M Sbjct: 6 IDILVVDDDVSHCTILQALLRGWGYNVALAYSGHDALAQVREKVF--DLVLCDVRMAEMD 63 Query: 469 GFLLLSTIMEHDACKNIPVIMMSSNDAVSMVFKCMLKGAADFLVKPIRKNELR 627 G L I + IP+++M++ +V + + GA D+L+KP+ + L+ Sbjct: 64 GIATLKEIKALNPA--IPILIMTAFSSVETAVEALKAGALDYLIKPLDFDRLQ 114
>Q8Z333:ZRAR_SALTI Transcriptional regulatory protein zraR - Salmonella typhi| Length = 441 Score = 58.2 bits (139), Expect = 2e-07 Identities = 36/113 (31%), Positives = 62/113 (54%) Frame = +1 Query: 289 VRVLLAEGDDSTRHVISALLRKCGYHVSAASDGVKAWELLKEKSFKIDLVLTEVELPSMS 468 + +L+ + D S ++ ALLR GY+V+ A G A ++EK F DLVL +V + M Sbjct: 6 IDILVVDDDVSHCTILQALLRGWGYNVALAYSGHDALAQVREKVF--DLVLCDVRMAEMD 63 Query: 469 GFLLLSTIMEHDACKNIPVIMMSSNDAVSMVFKCMLKGAADFLVKPIRKNELR 627 G L I + IP+++M++ +V + + GA D+L+KP+ + L+ Sbjct: 64 GIATLKEIKALNPA--IPILIMTAFSSVETAVEALKAGALDYLIKPLDFDRLQ 114
>Q8D0P1:CHEY_YERPE Chemotaxis protein cheY - Yersinia pestis| Length = 129 Score = 58.2 bits (139), Expect = 2e-07 Identities = 35/123 (28%), Positives = 61/123 (49%), Gaps = 1/123 (0%) Frame = +1 Query: 289 VRVLLAEGDDSTRHVISALLRKCGYH-VSAASDGVKAWELLKEKSFKIDLVLTEVELPSM 465 +R L+ + + R ++ LL++ G+H V A DGV A L+ F D V+++ +P+M Sbjct: 6 LRFLVVDDFSTMRRIVRNLLKELGFHNVEEAEDGVDALNKLRAGGF--DFVVSDWNMPNM 63 Query: 466 SGFLLLSTIMEHDACKNIPVIMMSSNDAVSMVFKCMLKGAADFLVKPIRKNELRNLWQHV 645 G LL TI A +PV+M+++ + GA+ ++VKP L + Sbjct: 64 DGLDLLKTIRTDGALATLPVLMVTAEAKKENIIAAAQAGASGYVVKPFTAATLEEKLNKI 123 Query: 646 WRK 654 + K Sbjct: 124 FEK 126
>Q9LYP5:ARR21_ARATH Putative two-component response regulator ARR21 - Arabidopsis| thaliana (Mouse-ear cress) Length = 592 Score = 57.8 bits (138), Expect = 2e-07 Identities = 56/217 (25%), Positives = 94/217 (43%), Gaps = 26/217 (11%) Frame = +1 Query: 280 MMPVRVLLAEGDDSTRHVISALLRKCGYHVSAASDGVKAWELLKEKSFKIDLVLTEVELP 459 ++ + V++ + D ++S +L+ Y V A D KA LK + IDL++T+ +P Sbjct: 13 VLKINVMVVDDDHVFLDIMSRMLQHSKYRVIAVDDPKKALSTLKIQRDNIDLIITDYYMP 72 Query: 460 SMSGFLLLSTIMEHDACKNIPVIMMSSNDAVSMVFKCMLKGAADFLVKPIRKNELRNLWQ 639 M+G L I + N+PV++MSS+ + + + GA F+ KPI +L ++Q Sbjct: 73 GMNGLQLKKQITQEFG--NLPVLVMSSD--TNKEEESLSCGAMGFIPKPIHPTDLTKIYQ 128 Query: 640 HVWRKQLANG-----------EIDVQQIQQEENVAEQHG-----RKTEATKAEHSTQNVV 771 + NG + DV QQ V EQ RK + K++ T N Sbjct: 129 FALSNK-RNGKSTLSTEQNHKDADVSVPQQITLVPEQADVLKTKRKNCSFKSDSRTVNST 187 Query: 772 ----------RKNRECSEQESDAQSSCTRSEPEAESK 852 RKNR+ + + S+P + K Sbjct: 188 NGSCVSTDGSRKNRKRKPNGGPSDDGESMSQPAKKKK 224
>P54443:YRKP_BACSU Uncharacterized sensory transduction protein yrkP - Bacillus| subtilis Length = 231 Score = 57.4 bits (137), Expect = 3e-07 Identities = 30/114 (26%), Positives = 59/114 (51%) Frame = +1 Query: 283 MPVRVLLAEGDDSTRHVISALLRKCGYHVSAASDGVKAWELLKEKSFKIDLVLTEVELPS 462 M R+L+ E D+ ++ L + GY V A DG +A +L+ + +DLV+ ++ +P Sbjct: 1 MAYRILVVEDDEDIGDLLEESLTRAGYEVLRAKDGKRALQLVND---SLDLVILDIMMPG 57 Query: 463 MSGFLLLSTIMEHDACKNIPVIMMSSNDAVSMVFKCMLKGAADFLVKPIRKNEL 624 +SG + T N+P++ +++ + + +L G D++ KP + EL Sbjct: 58 ISG---IETCQHIRKSSNVPILFLTARSSTLDKTEGLLAGGDDYMTKPFSEEEL 108
>P10577:NTRC_RHIME Nitrogen assimilation regulatory protein - Rhizobium meliloti| (Sinorhizobium meliloti) Length = 484 Score = 57.4 bits (137), Expect = 3e-07 Identities = 37/115 (32%), Positives = 58/115 (50%) Frame = +1 Query: 280 MMPVRVLLAEGDDSTRHVISALLRKCGYHVSAASDGVKAWELLKEKSFKIDLVLTEVELP 459 M +L+A+ D + R V++ L + GY V S+ W + DLV+T+V +P Sbjct: 1 MTGATILVADDDAAIRTVLNQALSRAGYDVRITSNAATLWRWIAAGDG--DLVVTDVVMP 58 Query: 460 SMSGFLLLSTIMEHDACKNIPVIMMSSNDAVSMVFKCMLKGAADFLVKPIRKNEL 624 + F LL I + A ++PV++MS+ + K KGA D+L KP EL Sbjct: 59 DENAFDLLPRIKK--ARPDLPVLVMSAQNTFMTAIKASEKGAYDYLPKPFDLTEL 111
>Q9C9A9:COL7_ARATH Zinc finger protein CONSTANS-LIKE 7 - Arabidopsis thaliana (Mouse-ear| cress) Length = 392 Score = 57.4 bits (137), Expect = 3e-07 Identities = 29/67 (43%), Positives = 45/67 (67%), Gaps = 1/67 (1%) Frame = +1 Query: 1774 EQCNASDGA-TENPSMEGLHHLSQREIALNKFRLKRKERCFEKKVRYQSRKLLAEQRPRV 1950 E+ +SDG+ T +G +RE + +++ KR+ R F KK+RY+ RKL AEQRPR+ Sbjct: 321 EKLMSSDGSVTRQQGRDGGGSDGEREARVLRYKEKRRTRLFSKKIRYEVRKLNAEQRPRI 380 Query: 1951 KGQFVRQ 1971 KG+FV++ Sbjct: 381 KGRFVKR 387
>Q9SHC2:ARR16_ARATH Two-component response regulator ARR16 - Arabidopsis thaliana| (Mouse-ear cress) Length = 164 Score = 57.0 bits (136), Expect = 4e-07 Identities = 34/131 (25%), Positives = 65/131 (49%), Gaps = 12/131 (9%) Frame = +1 Query: 289 VRVLLAEGDDSTRHVISALLRKCGYHVSAASDGVKAWELLKEKS------------FKID 432 + VL + + R ++ LL+ V+ A + ++A E L K+ Sbjct: 29 LHVLAVDDNLIDRKLVERLLKISCCKVTTAENALRALEYLGLGDQNQHIDALTCNVMKVS 88 Query: 433 LVLTEVELPSMSGFLLLSTIMEHDACKNIPVIMMSSNDAVSMVFKCMLKGAADFLVKPIR 612 L++T+ +P M+GF LL + E + +PV++MSS + + + KC+ GA F+ KP++ Sbjct: 89 LIITDYCMPGMTGFELLKKVKESSNLREVPVVIMSSENIPTRINKCLASGAQMFMQKPLK 148 Query: 613 KNELRNLWQHV 645 ++ L H+ Sbjct: 149 LADVEKLKCHL 159
>Q1XDE4:YCF29_PORYE Probable transcriptional regulator ycf29 - Porphyra yezoensis| Length = 222 Score = 56.6 bits (135), Expect = 5e-07 Identities = 40/163 (24%), Positives = 78/163 (47%) Frame = +1 Query: 283 MPVRVLLAEGDDSTRHVISALLRKCGYHVSAASDGVKAWELLKEKSFKIDLVLTEVELPS 462 M +++L E D I L G++V A++G++A L + +F DL+++++ +P Sbjct: 1 MSYKLMLVENDIVLSKAIQEYLIDQGFNVYIANNGLEALNLAYQYNF--DLIISDIMMPL 58 Query: 463 MSGFLLLSTIMEHDACKNIPVIMMSSNDAVSMVFKCMLKGAADFLVKPIRKNELRNLWQH 642 ++G+ LL+ + ++ A IPVI +++ K G +L KP NEL ++ + Sbjct: 59 VNGYELLAKLKKNKALSKIPVIFLTAKGMTKDRIKGYDMGCYGYLSKPFDPNELLSIINN 118 Query: 643 VWRKQLANGEIDVQQIQQEENVAEQHGRKTEATKAEHSTQNVV 771 + +A + +Q +Q K T E S ++V Sbjct: 119 L----IARDVLKEASLQNSATSNQQLNHKIRLTPREKSILDLV 157
>Q06065:ATOC_ECOLI Acetoacetate metabolism regulatory protein atoC - Escherichia coli| Length = 461 Score = 56.6 bits (135), Expect = 5e-07 Identities = 34/128 (26%), Positives = 62/128 (48%) Frame = +1 Query: 292 RVLLAEGDDSTRHVISALLRKCGYHVSAASDGVKAWELLKEKSFKIDLVLTEVELPSMSG 471 R+L+ + +D+ R ++S G+ A++G A L + D+VL ++ +P M G Sbjct: 6 RILIVDDEDNVRRMLSTAFALQGFETHCANNGRTALHLFAD--IHPDVVLMDIRMPEMDG 63 Query: 472 FLLLSTIMEHDACKNIPVIMMSSNDAVSMVFKCMLKGAADFLVKPIRKNELRNLWQHVWR 651 L + H+ PVI+M++ V + + GA D+++KP +EL + Q + Sbjct: 64 IKALKEMRSHET--RTPVILMTAYAEVETAVEALRCGAFDYVIKPFDLDELNLIVQRALQ 121 Query: 652 KQLANGEI 675 Q EI Sbjct: 122 LQSMKKEI 129
>P76340:YEDW_ECOLI Probable transcriptional regulatory protein yedW - Escherichia coli| Length = 223 Score = 56.2 bits (134), Expect = 6e-07 Identities = 34/112 (30%), Positives = 60/112 (53%) Frame = +1 Query: 289 VRVLLAEGDDSTRHVISALLRKCGYHVSAASDGVKAWELLKEKSFKIDLVLTEVELPSMS 468 +++LL E + T+ ++ L + GY + A SDG L + + L++ ++ LP M Sbjct: 1 MKILLIEDNQRTQEWVTQGLSEAGYVIDAVSDGRDGLYLALKDDYA--LIILDIMLPGMD 58 Query: 469 GFLLLSTIMEHDACKNIPVIMMSSNDAVSMVFKCMLKGAADFLVKPIRKNEL 624 G+ +L T+ K PVI +++ D+V + + GA D+LVKP +EL Sbjct: 59 GWQILQTLR---TAKQTPVICLTARDSVDDRVRGLDSGANDYLVKPFSFSEL 107
>P46384:PILG_PSEAE Protein pilG - Pseudomonas aeruginosa| Length = 135 Score = 56.2 bits (134), Expect = 6e-07 Identities = 33/112 (29%), Positives = 56/112 (50%) Frame = +1 Query: 289 VRVLLAEGDDSTRHVISALLRKCGYHVSAASDGVKAWELLKEKSFKIDLVLTEVELPSMS 468 ++V++ + + R LL+K G V A DG A L K +++ ++ +P + Sbjct: 8 LKVMVIDDSKTIRRTAETLLKKVGCDVITAIDGFDA--LAKIADTHPNIIFVDIMMPRLD 65 Query: 469 GFLLLSTIMEHDACKNIPVIMMSSNDAVSMVFKCMLKGAADFLVKPIRKNEL 624 G+ + I + A K+ PVIM+SS D + K + G+ +L KP K EL Sbjct: 66 GYQTCALIKNNSAFKSTPVIMLSSKDGLFDKAKGRIVGSDQYLTKPFSKEEL 117
>P45189:PHOB_HAEIN Phosphate regulon transcriptional regulatory protein phoB -| Haemophilus influenzae Length = 231 Score = 55.8 bits (133), Expect = 8e-07 Identities = 38/143 (26%), Positives = 68/143 (47%), Gaps = 2/143 (1%) Frame = +1 Query: 283 MPVRVLLAEGDDSTRHVISALLRKCGYHVSAASDGVKAWELLKEKSFKIDLVLTEVELPS 462 M ++L+ E + + R +I+ L + Y V ASD A +KE L+L + LP Sbjct: 1 MTRKILIVEDECAIREMIALFLSQKYYDVIEASDFKTAINKIKENP---KLILLDWMLPG 57 Query: 463 MSGFLLLSTIMEHDACKNIPVIMMSSNDAVSMVFKCMLKGAADFLVKPIRKNELRNLWQH 642 SG + I + ++ IP+IM+++ C+ GA D++ KP L + Sbjct: 58 RSGIQFIQYIKKQESYAAIPIIMLTAKSTEEDCIACLNAGADDYITKPFSPQILLARIEA 117 Query: 643 VWRK--QLANGEIDVQQIQQEEN 705 VWR+ + + I + ++ +EN Sbjct: 118 VWRRIYEQQSQFIQIDELSIDEN 140
>Q04803:PFER_PSEAE Transcriptional activator protein pfeR - Pseudomonas aeruginosa| Length = 305 Score = 55.8 bits (133), Expect = 8e-07 Identities = 37/111 (33%), Positives = 54/111 (48%) Frame = +1 Query: 292 RVLLAEGDDSTRHVISALLRKCGYHVSAASDGVKAWELLKEKSFKIDLVLTEVELPSMSG 471 R+LL E D R + A R+ G+ V+ DG E ++F DLVL ++ LP + G Sbjct: 79 RLLLVEDDPRLREDLDAHFRRRGFRVTVCGDGSHGLEAAGREAF--DLVLLDIMLPGLDG 136 Query: 472 FLLLSTIMEHDACKNIPVIMMSSNDAVSMVFKCMLKGAADFLVKPIRKNEL 624 LL ++ A PV++MS+ A +GA D+L KP EL Sbjct: 137 LALLESLRREQAT---PVMLMSALGAEQDRISGFTRGADDYLPKPFSLAEL 184
>Q39T95:CHEB2_GEOMG Chemotaxis response regulator protein-glutamate methylesterase 2 -| Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) Length = 360 Score = 55.8 bits (133), Expect = 8e-07 Identities = 50/168 (29%), Positives = 78/168 (46%), Gaps = 4/168 (2%) Frame = +1 Query: 280 MMPVRVLLAEGDDSTRHVISALLRKCGYHVSA--ASDGVKAWELLKEKSFKIDLVLTEVE 453 M +RV++ + R I +L V A A+DG + + K K DLV ++E Sbjct: 1 MRKIRVVVIDDSAFNRRAIIKMLESMPEVVVAGYANDGEEG--IRKVIDLKPDLVTLDLE 58 Query: 454 LPSMSGFLLLSTIMEHDACKNIPVIMMSSNDAVSMVFKCMLKGAADFLVKPIR--KNELR 627 +P M GF LL IM + C PVI++S+ VFK + GA DF+ KP + EL Sbjct: 59 MPKMDGFTLLRIIMGY--CPT-PVIVISAKSDDEKVFKALELGAVDFVAKPSQGISEELL 115 Query: 628 NLWQHVWRKQLANGEIDVQQIQQEENVAEQHGRKTEATKAEHSTQNVV 771 + + +K +++++I + E V KAE + VV Sbjct: 116 TITDDIQQKVRGVFSLNMKEIIRREKVEVLAPPPVAPKKAEAEPRRVV 163
>P18769:FRZE_MYXXA Gliding motility regulatory protein - Myxococcus xanthus| Length = 777 Score = 55.1 bits (131), Expect = 1e-06 Identities = 34/105 (32%), Positives = 57/105 (54%) Frame = +1 Query: 289 VRVLLAEGDDSTRHVISALLRKCGYHVSAASDGVKAWELLKEKSFKIDLVLTEVELPSMS 468 +RVLL + R AL++ G+ V A DG +A+ ++ ++ DL+LT+V++P + Sbjct: 659 LRVLLVDDSPIARATEGALVKALGHSVEEAQDGEEAYVKVQNNTY--DLILTDVQMPKLD 716 Query: 469 GFLLLSTIMEHDACKNIPVIMMSSNDAVSMVFKCMLKGAADFLVK 603 GF L + A IPVI++SS + + + GA +LVK Sbjct: 717 GFSLARRLKSTPAVARIPVIILSSLASPEDKRRGLDAGADAYLVK 761
>Q93P00:CHEY_YEREN Chemotaxis protein cheY - Yersinia enterocolitica| Length = 129 Score = 55.1 bits (131), Expect = 1e-06 Identities = 34/123 (27%), Positives = 61/123 (49%), Gaps = 1/123 (0%) Frame = +1 Query: 289 VRVLLAEGDDSTRHVISALLRKCGYH-VSAASDGVKAWELLKEKSFKIDLVLTEVELPSM 465 +R L+ + + R ++ LL++ G++ V A DGV A L+ F D V+++ +P+M Sbjct: 6 LRFLVVDDFSTMRRIVRNLLKELGFNNVEEAEDGVDALNKLRTGGF--DFVVSDWNMPNM 63 Query: 466 SGFLLLSTIMEHDACKNIPVIMMSSNDAVSMVFKCMLKGAADFLVKPIRKNELRNLWQHV 645 G LL TI A +PV+M+++ + GA+ ++VKP L + Sbjct: 64 DGLDLLKTIRADGALGTLPVLMVTAEAKKENIIAAAQAGASGYVVKPFTAATLEEKLNKI 123 Query: 646 WRK 654 + K Sbjct: 124 FEK 126
>Q56312:CHEY_THEMA Chemotaxis protein cheY - Thermotoga maritima| Length = 120 Score = 55.1 bits (131), Expect = 1e-06 Identities = 36/115 (31%), Positives = 63/115 (54%), Gaps = 1/115 (0%) Frame = +1 Query: 283 MPVRVLLAEGDDSTRHVISALLRKCGYHVSA-ASDGVKAWELLKEKSFKIDLVLTEVELP 459 M RVL+ + R ++ ++ K GY V+ A++G +A E K K K D+V ++ +P Sbjct: 1 MGKRVLIVDDAAFMRMMLKDIITKAGYEVAGEATNGREAVE--KYKELKPDIVTMDITMP 58 Query: 460 SMSGFLLLSTIMEHDACKNIPVIMMSSNDAVSMVFKCMLKGAADFLVKPIRKNEL 624 M+G + IM+ D N +I+ S+ +MV + + GA DF+VKP + + + Sbjct: 59 EMNGIDAIKEIMKIDP--NAKIIVCSAMGQQAMVIEAIKAGAKDFIVKPFQPSRV 111
>P38889:SKN7_YEAST Transcription factor SKN7 - Saccharomyces cerevisiae (Baker's| yeast) Length = 622 Score = 54.7 bits (130), Expect = 2e-06 Identities = 42/170 (24%), Positives = 72/170 (42%) Frame = +1 Query: 295 VLLAEGDDSTRHVISALLRKCGYHVSAASDGVKAWELLKEKSFKIDLVLTEVELPSMSGF 474 VLL E D + + S LRK G V SDG+ A L++ ++ DLVL ++ +P++ G Sbjct: 379 VLLVEDDAVSIQLCSKFLRKYGCTVQVVSDGLSAISTLEK--YRYDLVLMDIVMPNLDGA 436 Query: 475 LLLSTIMEHDACKNIPVIMMSSNDAVSMVFKCMLKGAADFLVKPIRKNELRNLWQHVWRK 654 S + D P+I M+ N + + G D L KP +++L + Sbjct: 437 TATSIVRSFD--NETPIIAMTGNIMNQDLITYLQHGMNDILAKPFTRDDLHS-------- 486 Query: 655 QLANGEIDVQQIQQEENVAEQHGRKTEATKAEHSTQNVVRKNRECSEQES 804 I ++ ++ + EQ ++ HS N N ++S Sbjct: 487 ------ILIRYLKDRIPLCEQQLPPRNSSPQTHSNTNTANSNPNTINEQS 530
>P71403:CHEY_HELPY Chemotaxis protein cheY homolog - Helicobacter pylori| (Campylobacter pylori) Length = 124 Score = 54.7 bits (130), Expect = 2e-06 Identities = 30/114 (26%), Positives = 59/114 (51%), Gaps = 1/114 (0%) Frame = +1 Query: 289 VRVLLAEGDDSTRHVISALLRKCGYH-VSAASDGVKAWELLKEKSFKIDLVLTEVELPSM 465 +++L+ + + R +I L + GY V A GV+AWE L + + +++T+ +P M Sbjct: 1 MKLLVVDDSSTMRRIIKNTLSRLGYEDVLEAEHGVEAWEKL-DANADTKVLITDWNMPEM 59 Query: 466 SGFLLLSTIMEHDACKNIPVIMMSSNDAVSMVFKCMLKGAADFLVKPIRKNELR 627 +G L+ + K IP+IM+++ + V + G +++VKP L+ Sbjct: 60 NGLDLVKKVRSDSRFKEIPIIMITTEGGKAEVITALKAGVNNYIVKPFTPQVLK 113
>Q9ZM64:CHEY_HELPJ Chemotaxis protein cheY homolog - Helicobacter pylori J99| (Campylobacter pylori J99) Length = 124 Score = 54.7 bits (130), Expect = 2e-06 Identities = 30/114 (26%), Positives = 60/114 (52%), Gaps = 1/114 (0%) Frame = +1 Query: 289 VRVLLAEGDDSTRHVISALLRKCGYH-VSAASDGVKAWELLKEKSFKIDLVLTEVELPSM 465 +++L+ + + R +I L + GY V A GV+AWE L + + +++T+ +P M Sbjct: 1 MKLLVVDDSSTMRRIIKNTLSRLGYEDVLEAEHGVEAWEKL-DANADTKVLITDWNMPEM 59 Query: 466 SGFLLLSTIMEHDACKNIPVIMMSSNDAVSMVFKCMLKGAADFLVKPIRKNELR 627 +G L+ + + K IP+IM+++ + V + G +++VKP L+ Sbjct: 60 NGLDLVKKVRADNRFKEIPIIMITTEGGKAEVITALKAGVNNYIVKPFTPQVLK 113
>Q7A0U4:SRRA_STAAW Transcriptional regulatory protein srrA - Staphylococcus aureus| (strain MW2) Length = 241 Score = 54.3 bits (129), Expect = 2e-06 Identities = 30/114 (26%), Positives = 59/114 (51%) Frame = +1 Query: 283 MPVRVLLAEGDDSTRHVISALLRKCGYHVSAASDGVKAWELLKEKSFKIDLVLTEVELPS 462 M +L+ + +D R ++ L + + + AS+G +A+EL E ++ +L ++ LP Sbjct: 1 MSNEILIVDDEDRIRRLLKMYLERESFEIHEASNGQEAYELAMENNYAC--ILLDLMLPE 58 Query: 463 MSGFLLLSTIMEHDACKNIPVIMMSSNDAVSMVFKCMLKGAADFLVKPIRKNEL 624 M G + + + EH K P+IM+++ + + GA D++VKP E+ Sbjct: 59 MDGIQVATKLREH---KQTPIIMLTAKGEETNRVEGFESGADDYIVKPFSPREV 109
>Q9L524:SRRA_STAAU Transcriptional regulatory protein srrA - Staphylococcus aureus| Length = 241 Score = 54.3 bits (129), Expect = 2e-06 Identities = 30/114 (26%), Positives = 59/114 (51%) Frame = +1 Query: 283 MPVRVLLAEGDDSTRHVISALLRKCGYHVSAASDGVKAWELLKEKSFKIDLVLTEVELPS 462 M +L+ + +D R ++ L + + + AS+G +A+EL E ++ +L ++ LP Sbjct: 1 MSNEILIVDDEDRIRRLLKMYLERESFEIHEASNGQEAYELAMENNYAC--ILLDLMLPE 58 Query: 463 MSGFLLLSTIMEHDACKNIPVIMMSSNDAVSMVFKCMLKGAADFLVKPIRKNEL 624 M G + + + EH K P+IM+++ + + GA D++VKP E+ Sbjct: 59 MDGIQVATKLREH---KQTPIIMLTAKGEETNRVEGFESGADDYIVKPFSPREV 109
>Q6G972:SRRA_STAAS Transcriptional regulatory protein srrA - Staphylococcus aureus| (strain MSSA476) Length = 241 Score = 54.3 bits (129), Expect = 2e-06 Identities = 30/114 (26%), Positives = 59/114 (51%) Frame = +1 Query: 283 MPVRVLLAEGDDSTRHVISALLRKCGYHVSAASDGVKAWELLKEKSFKIDLVLTEVELPS 462 M +L+ + +D R ++ L + + + AS+G +A+EL E ++ +L ++ LP Sbjct: 1 MSNEILIVDDEDRIRRLLKMYLERESFEIHEASNGQEAYELAMENNYAC--ILLDLMLPE 58 Query: 463 MSGFLLLSTIMEHDACKNIPVIMMSSNDAVSMVFKCMLKGAADFLVKPIRKNEL 624 M G + + + EH K P+IM+++ + + GA D++VKP E+ Sbjct: 59 MDGIQVATKLREH---KQTPIIMLTAKGEETNRVEGFESGADDYIVKPFSPREV 109
>Q6GGK6:SRRA_STAAR Transcriptional regulatory protein srrA - Staphylococcus aureus| (strain MRSA252) Length = 241 Score = 54.3 bits (129), Expect = 2e-06 Identities = 30/114 (26%), Positives = 59/114 (51%) Frame = +1 Query: 283 MPVRVLLAEGDDSTRHVISALLRKCGYHVSAASDGVKAWELLKEKSFKIDLVLTEVELPS 462 M +L+ + +D R ++ L + + + AS+G +A+EL E ++ +L ++ LP Sbjct: 1 MSNEILIVDDEDRIRRLLKMYLERESFEIHEASNGQEAYELAMENNYAC--ILLDLMLPE 58 Query: 463 MSGFLLLSTIMEHDACKNIPVIMMSSNDAVSMVFKCMLKGAADFLVKPIRKNEL 624 M G + + + EH K P+IM+++ + + GA D++VKP E+ Sbjct: 59 MDGIQVATKLREH---KQTPIIMLTAKGEETNRVEGFESGADDYIVKPFSPREV 109
>Q7A5H6:SRRA_STAAN Transcriptional regulatory protein srrA - Staphylococcus aureus| (strain N315) Length = 241 Score = 54.3 bits (129), Expect = 2e-06 Identities = 30/114 (26%), Positives = 59/114 (51%) Frame = +1 Query: 283 MPVRVLLAEGDDSTRHVISALLRKCGYHVSAASDGVKAWELLKEKSFKIDLVLTEVELPS 462 M +L+ + +D R ++ L + + + AS+G +A+EL E ++ +L ++ LP Sbjct: 1 MSNEILIVDDEDRIRRLLKMYLERESFEIHEASNGQEAYELAMENNYAC--ILLDLMLPE 58 Query: 463 MSGFLLLSTIMEHDACKNIPVIMMSSNDAVSMVFKCMLKGAADFLVKPIRKNEL 624 M G + + + EH K P+IM+++ + + GA D++VKP E+ Sbjct: 59 MDGIQVATKLREH---KQTPIIMLTAKGEETNRVEGFESGADDYIVKPFSPREV 109
>Q7A2R6:SRRA_STAAM Transcriptional regulatory protein srrA - Staphylococcus aureus| (strain Mu50 / ATCC 700699) Length = 241 Score = 54.3 bits (129), Expect = 2e-06 Identities = 30/114 (26%), Positives = 59/114 (51%) Frame = +1 Query: 283 MPVRVLLAEGDDSTRHVISALLRKCGYHVSAASDGVKAWELLKEKSFKIDLVLTEVELPS 462 M +L+ + +D R ++ L + + + AS+G +A+EL E ++ +L ++ LP Sbjct: 1 MSNEILIVDDEDRIRRLLKMYLERESFEIHEASNGQEAYELAMENNYAC--ILLDLMLPE 58 Query: 463 MSGFLLLSTIMEHDACKNIPVIMMSSNDAVSMVFKCMLKGAADFLVKPIRKNEL 624 M G + + + EH K P+IM+++ + + GA D++VKP E+ Sbjct: 59 MDGIQVATKLREH---KQTPIIMLTAKGEETNRVEGFESGADDYIVKPFSPREV 109
>Q5HFT0:SRRA_STAAC Transcriptional regulatory protein srrA - Staphylococcus aureus| (strain COL) Length = 241 Score = 54.3 bits (129), Expect = 2e-06 Identities = 30/114 (26%), Positives = 59/114 (51%) Frame = +1 Query: 283 MPVRVLLAEGDDSTRHVISALLRKCGYHVSAASDGVKAWELLKEKSFKIDLVLTEVELPS 462 M +L+ + +D R ++ L + + + AS+G +A+EL E ++ +L ++ LP Sbjct: 1 MSNEILIVDDEDRIRRLLKMYLERESFEIHEASNGQEAYELAMENNYAC--ILLDLMLPE 58 Query: 463 MSGFLLLSTIMEHDACKNIPVIMMSSNDAVSMVFKCMLKGAADFLVKPIRKNEL 624 M G + + + EH K P+IM+++ + + GA D++VKP E+ Sbjct: 59 MDGIQVATKLREH---KQTPIIMLTAKGEETNRVEGFESGADDYIVKPFSPREV 109
>Q2FY79:SRRA_STAA8 Transcriptional regulatory protein srrA - Staphylococcus aureus| (strain NCTC 8325) Length = 241 Score = 54.3 bits (129), Expect = 2e-06 Identities = 30/114 (26%), Positives = 59/114 (51%) Frame = +1 Query: 283 MPVRVLLAEGDDSTRHVISALLRKCGYHVSAASDGVKAWELLKEKSFKIDLVLTEVELPS 462 M +L+ + +D R ++ L + + + AS+G +A+EL E ++ +L ++ LP Sbjct: 1 MSNEILIVDDEDRIRRLLKMYLERESFEIHEASNGQEAYELAMENNYAC--ILLDLMLPE 58 Query: 463 MSGFLLLSTIMEHDACKNIPVIMMSSNDAVSMVFKCMLKGAADFLVKPIRKNEL 624 M G + + + EH K P+IM+++ + + GA D++VKP E+ Sbjct: 59 MDGIQVATKLREH---KQTPIIMLTAKGEETNRVEGFESGADDYIVKPFSPREV 109
>O86488:SDRD_STAAU Serine-aspartate repeat-containing protein D precursor -| Staphylococcus aureus Length = 1315 Score = 54.3 bits (129), Expect = 2e-06 Identities = 37/144 (25%), Positives = 69/144 (47%), Gaps = 7/144 (4%) Frame = +1 Query: 661 ANGEIDVQQIQQEENVAEQHGRKTEATKAEHSTQN---VVRKNRECSEQESDAQSSCTRS 831 ++ ++D+QQ+ QE+N + ++ +++ +T N ++ K S + + S +S Sbjct: 72 SSDKVDMQQLNQEDNTKNDNQKEMVSSQGNETTSNGNKLIEKESVQSTTGNKVEVSTAKS 131 Query: 832 EPEAESKHTNSFLEFKQITERQSSTDP----KNTVENRDPENPSENKRKKASTDIEVVHI 999 + +A K TN L KQ Q + P +V N P N ENK+ A T+ +++ Sbjct: 132 DEQASPKSTNEDLNTKQTISNQEALQPDLQENKSVVNVQPTN-EENKKVDAKTESTTLNV 190 Query: 1000 IDDAPKPSTMEVDIVRTNSKGNGD 1071 DA K + + +V NS N + Sbjct: 191 KSDAIKSN--DETLVDNNSNSNNE 212
>Q5HIB3:SDRD_STAAC Serine-aspartate repeat-containing protein D precursor -| Staphylococcus aureus (strain COL) Length = 1381 Score = 54.3 bits (129), Expect = 2e-06 Identities = 37/144 (25%), Positives = 69/144 (47%), Gaps = 7/144 (4%) Frame = +1 Query: 661 ANGEIDVQQIQQEENVAEQHGRKTEATKAEHSTQN---VVRKNRECSEQESDAQSSCTRS 831 ++ ++D+QQ+ QE+N + ++ +++ +T N ++ K S + + S +S Sbjct: 72 SSDKVDMQQLNQEDNTKNDNQKEMVSSQGNETTSNGNKLIEKESVQSTTGNKVEVSTAKS 131 Query: 832 EPEAESKHTNSFLEFKQITERQSSTDP----KNTVENRDPENPSENKRKKASTDIEVVHI 999 + +A K TN L KQ Q + P +V N P N ENK+ A T+ +++ Sbjct: 132 DEQASPKSTNEDLNTKQTISNQEALQPDLQENKSVVNVQPTN-EENKKVDAKTESTTLNV 190 Query: 1000 IDDAPKPSTMEVDIVRTNSKGNGD 1071 DA K + + +V NS N + Sbjct: 191 KSDAIKSN--DETLVDNNSNSNNE 212
>Q2G0L4:SDRD_STAA8 Serine-aspartate repeat-containing protein D precursor -| Staphylococcus aureus (strain NCTC 8325) Length = 1349 Score = 54.3 bits (129), Expect = 2e-06 Identities = 37/144 (25%), Positives = 69/144 (47%), Gaps = 7/144 (4%) Frame = +1 Query: 661 ANGEIDVQQIQQEENVAEQHGRKTEATKAEHSTQN---VVRKNRECSEQESDAQSSCTRS 831 ++ ++D+QQ+ QE+N + ++ +++ +T N ++ K S + + S +S Sbjct: 72 SSDKVDMQQLNQEDNTKNDNQKEMVSSQGNETTSNGNKLIEKESVQSTTGNKVEVSTAKS 131 Query: 832 EPEAESKHTNSFLEFKQITERQSSTDP----KNTVENRDPENPSENKRKKASTDIEVVHI 999 + +A K TN L KQ Q + P +V N P N ENK+ A T+ +++ Sbjct: 132 DEQASPKSTNEDLNTKQTISNQEALQPDLQENKSVVNVQPTN-EENKKVDAKTESTTLNV 190 Query: 1000 IDDAPKPSTMEVDIVRTNSKGNGD 1071 DA K + + +V NS N + Sbjct: 191 KSDAIKSN--DETLVDNNSNSNNE 212
>Q2FJ78:SDRD_STAA3 Serine-aspartate repeat-containing protein D precursor -| Staphylococcus aureus (strain USA300) Length = 1381 Score = 54.3 bits (129), Expect = 2e-06 Identities = 37/144 (25%), Positives = 69/144 (47%), Gaps = 7/144 (4%) Frame = +1 Query: 661 ANGEIDVQQIQQEENVAEQHGRKTEATKAEHSTQN---VVRKNRECSEQESDAQSSCTRS 831 ++ ++D+QQ+ QE+N + ++ +++ +T N ++ K S + + S +S Sbjct: 72 SSDKVDMQQLNQEDNTKNDNQKEMVSSQGNETTSNGNKLIEKESVQSTTGNKVEVSTAKS 131 Query: 832 EPEAESKHTNSFLEFKQITERQSSTDP----KNTVENRDPENPSENKRKKASTDIEVVHI 999 + +A K TN L KQ Q + P +V N P N ENK+ A T+ +++ Sbjct: 132 DEQASPKSTNEDLNTKQTISNQEALQPDLQENKSVVNVQPTN-EENKKVDAKTESTTLNV 190 Query: 1000 IDDAPKPSTMEVDIVRTNSKGNGD 1071 DA K + + +V NS N + Sbjct: 191 KSDAIKSN--DETLVDNNSNSNNE 212
>P0AEV3:HNR_SHIFL Protein hnr - Shigella flexneri| Length = 337 Score = 54.3 bits (129), Expect = 2e-06 Identities = 34/120 (28%), Positives = 63/120 (52%), Gaps = 1/120 (0%) Frame = +1 Query: 277 PMMPVRVLLAEGDDSTRHVISALLRKCGYHVSAASDGVKAWELLKEKSFKIDLVLTEVEL 456 P++ ++L+ E + R ++ + G A+DGV A ELL F DL++ ++ + Sbjct: 4 PLVGKQILIVEDEQVFRSLLDSWFSSLGATTVLAADGVDALELL--GGFTPDLMICDIAM 61 Query: 457 PSMSGFLLLSTIMEHDACKNIPVIMMSSNDAVSMVFKCMLKGAADFLVKPIRK-NELRNL 633 P M+G LL I PV+++S+ + ++ + K + G D L+KP++ N LR + Sbjct: 62 PRMNGLKLLEHIRNRG--DQTPVLVISATENMADIAKALRLGVEDVLLKPVKDLNRLREM 119
>P0AEV1:HNR_ECOLI Protein hnr - Escherichia coli| Length = 337 Score = 54.3 bits (129), Expect = 2e-06 Identities = 34/120 (28%), Positives = 63/120 (52%), Gaps = 1/120 (0%) Frame = +1 Query: 277 PMMPVRVLLAEGDDSTRHVISALLRKCGYHVSAASDGVKAWELLKEKSFKIDLVLTEVEL 456 P++ ++L+ E + R ++ + G A+DGV A ELL F DL++ ++ + Sbjct: 4 PLVGKQILIVEDEQVFRSLLDSWFSSLGATTVLAADGVDALELL--GGFTPDLMICDIAM 61 Query: 457 PSMSGFLLLSTIMEHDACKNIPVIMMSSNDAVSMVFKCMLKGAADFLVKPIRK-NELRNL 633 P M+G LL I PV+++S+ + ++ + K + G D L+KP++ N LR + Sbjct: 62 PRMNGLKLLEHIRNRG--DQTPVLVISATENMADIAKALRLGVEDVLLKPVKDLNRLREM 119
>P0AEV2:HNR_ECO57 Protein hnr - Escherichia coli O157:H7| Length = 337 Score = 54.3 bits (129), Expect = 2e-06 Identities = 34/120 (28%), Positives = 63/120 (52%), Gaps = 1/120 (0%) Frame = +1 Query: 277 PMMPVRVLLAEGDDSTRHVISALLRKCGYHVSAASDGVKAWELLKEKSFKIDLVLTEVEL 456 P++ ++L+ E + R ++ + G A+DGV A ELL F DL++ ++ + Sbjct: 4 PLVGKQILIVEDEQVFRSLLDSWFSSLGATTVLAADGVDALELL--GGFTPDLMICDIAM 61 Query: 457 PSMSGFLLLSTIMEHDACKNIPVIMMSSNDAVSMVFKCMLKGAADFLVKPIRK-NELRNL 633 P M+G LL I PV+++S+ + ++ + K + G D L+KP++ N LR + Sbjct: 62 PRMNGLKLLEHIRNRG--DQTPVLVISATENMADIAKALRLGVEDVLLKPVKDLNRLREM 119
>P24072:CHEY_BACSU Chemotaxis protein cheY homolog - Bacillus subtilis| Length = 120 Score = 54.3 bits (129), Expect = 2e-06 Identities = 41/115 (35%), Positives = 59/115 (51%), Gaps = 1/115 (0%) Frame = +1 Query: 283 MPVRVLLAEGDDSTRHVISALLRKCGYHVSA-ASDGVKAWELLKEKSFKIDLVLTEVELP 459 M R+L+ + R +I +L K G+ V A A +G +A E KE S DLV ++ +P Sbjct: 1 MAHRILIVDDAAFMRMMIKDILVKNGFEVVAEAENGAQAVEKYKEHS--PDLVTMDITMP 58 Query: 460 SMSGFLLLSTIMEHDACKNIPVIMMSSNDAVSMVFKCMLKGAADFLVKPIRKNEL 624 M G L I + DA I IM S+ SMV + GA DF+VKP + + + Sbjct: 59 EMDGITALKEIKQIDAQARI--IMCSAMGQQSMVIDAIQAGAKDFIVKPFQADRV 111
>Q04942:AFSQ1_STRCO Transcriptional regulatory protein afsQ1 - Streptomyces coelicolor| Length = 225 Score = 54.3 bits (129), Expect = 2e-06 Identities = 34/107 (31%), Positives = 63/107 (58%), Gaps = 1/107 (0%) Frame = +1 Query: 295 VLLAEGDDSTRHVISALLRKCGYHVSAASDGVKAWELLKEKSFKIDLVLTEVELPSMSGF 474 +LL E DD+ R + L + G+ V+ A+ G +LL+E+ + DL++ +V LP + GF Sbjct: 4 LLLIEDDDAIRTALELSLTRQGHRVATAASGEDGLKLLREQ--RPDLIVLDVMLPGIDGF 61 Query: 475 LLLSTIMEHDACKNIPVIMMSS-NDAVSMVFKCMLKGAADFLVKPIR 612 + I D +P+I++++ ND + +V + GA D++VKP++ Sbjct: 62 EVCRRIRRTD---QLPIILLTARNDDIDVVVG-LESGADDYVVKPVQ 104
>P0C0F7:RPFC_XANC8 Sensory/regulatory protein rpfC - Xanthomonas campestris pv.| campestris (strain 8004) Length = 677 Score = 53.9 bits (128), Expect = 3e-06 Identities = 37/146 (25%), Positives = 71/146 (48%), Gaps = 4/146 (2%) Frame = +1 Query: 289 VRVLLAEGDDSTRHVISALLRKCGYHVSAASDGVKAWELLKEKSFKIDLVLTEVELPSMS 468 +R+L+A+ ++ R V+ LL K G+ V + + + + E+ + D V+ ++ +P M+ Sbjct: 413 MRMLVADDHEANRMVLQRLLEKAGHKVLCVNGAEQVLDAMAEEDY--DAVIVDLHMPGMN 470 Query: 469 GFLLLST--IMEHDACKNIPVIMMSSNDAVSMVFKCMLKGAADFLVKPIRKNELRNLWQH 642 G +L +M+ + PV+++S++ + C GA FL KP+ +L + Sbjct: 471 GLDMLKQLRVMQASGMRYTPVVVLSADVTPEAIRACEQAGARAFLAKPVLAAKLLDTLAD 530 Query: 643 --VWRKQLANGEIDVQQIQQEENVAE 714 V +QLA VQ E V + Sbjct: 531 LAVSTRQLATPATTVQVATSFEGVLD 556
>Q9SK53:COL3_ARATH Zinc finger protein CONSTANS-LIKE 3 - Arabidopsis thaliana (Mouse-ear| cress) Length = 294 Score = 53.9 bits (128), Expect = 3e-06 Identities = 27/60 (45%), Positives = 40/60 (66%) Frame = +1 Query: 1801 TENPSMEGLHHLSQREIALNKFRLKRKERCFEKKVRYQSRKLLAEQRPRVKGQFVRQDQS 1980 TE P+++ ++RE + ++R KRK R FEK +RY SRK AE RPR+KG+F ++ S Sbjct: 217 TETPAVQ--LSPAEREARVLRYREKRKNRKFEKTIRYASRKAYAEMRPRIKGRFAKRTDS 274
>Q8RWD0:COL16_ARATH Zinc finger protein CONSTANS-LIKE 16 - Arabidopsis thaliana| (Mouse-ear cress) Length = 417 Score = 53.9 bits (128), Expect = 3e-06 Identities = 27/59 (45%), Positives = 40/59 (67%) Frame = +1 Query: 1843 REIALNKFRLKRKERCFEKKVRYQSRKLLAEQRPRVKGQFVRQDQSVQGSS*MSPAGNN 2019 RE ++++R KR+ R F KK+RY+ RKL AE+RPR+KG+FV++ + SP G N Sbjct: 361 REARVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFVKRASLAAAA---SPLGVN 416
>Q51455:CHEY_PSEAE Chemotaxis protein cheY - Pseudomonas aeruginosa| Length = 124 Score = 53.9 bits (128), Expect = 3e-06 Identities = 29/123 (23%), Positives = 63/123 (51%), Gaps = 1/123 (0%) Frame = +1 Query: 289 VRVLLAEGDDSTRHVISALLRKCGY-HVSAASDGVKAWELLKEKSFKIDLVLTEVELPSM 465 +++L+ + + R +I LLR G+ + + A DG A +L +F D ++T+ +P M Sbjct: 1 MKILIVDDFSTMRRIIKNLLRDLGFTNTAEADDGTTALPMLHSGNF--DFLVTDWNMPGM 58 Query: 466 SGFLLLSTIMEHDACKNIPVIMMSSNDAVSMVFKCMLKGAADFLVKPIRKNELRNLWQHV 645 +G LL + + K++PV+M+++ + + G ++VKP L+ + + Sbjct: 59 TGIDLLRAVRADERLKHLPVLMVTAEAKRDQIIEAAQAGVNGYVVKPFTAQVLKEKIEKI 118 Query: 646 WRK 654 + + Sbjct: 119 FER 121
>A1W0A5:CHEY_CAMJJ Chemotaxis protein cheY homolog - Campylobacter jejuni subsp.| jejuni serotype O:23/36 (strain 81-176) Length = 130 Score = 53.9 bits (128), Expect = 3e-06 Identities = 29/120 (24%), Positives = 64/120 (53%), Gaps = 1/120 (0%) Frame = +1 Query: 289 VRVLLAEGDDSTRHVISALLRKCGYH-VSAASDGVKAWELLKEKSFKIDLVLTEVELPSM 465 +++L+ + + R +I L + G+ V A GV+AW+LL K+ + +++T+ +P M Sbjct: 1 MKLLVVDDSSTMRRIIKNTLTRLGHDDVLEAEHGVEAWDLLT-KNEDVKVLITDWNMPEM 59 Query: 466 SGFLLLSTIMEHDACKNIPVIMMSSNDAVSMVFKCMLKGAADFLVKPIRKNELRNLWQHV 645 +G L+ + +++P+IM+++ + V + G +++VKP L+ + V Sbjct: 60 NGLELVKKVRAEKKYEDMPIIMVTTEGGKAEVITALKAGVNNYIVKPFTPQVLKEKLEDV 119
>Q0P9D6:CHEY_CAMJE Chemotaxis protein cheY homolog - Campylobacter jejuni| Length = 130 Score = 53.9 bits (128), Expect = 3e-06 Identities = 29/120 (24%), Positives = 64/120 (53%), Gaps = 1/120 (0%) Frame = +1 Query: 289 VRVLLAEGDDSTRHVISALLRKCGYH-VSAASDGVKAWELLKEKSFKIDLVLTEVELPSM 465 +++L+ + + R +I L + G+ V A GV+AW+LL K+ + +++T+ +P M Sbjct: 1 MKLLVVDDSSTMRRIIKNTLTRLGHDDVLEAEHGVEAWDLLT-KNEDVKVLITDWNMPEM 59 Query: 466 SGFLLLSTIMEHDACKNIPVIMMSSNDAVSMVFKCMLKGAADFLVKPIRKNELRNLWQHV 645 +G L+ + +++P+IM+++ + V + G +++VKP L+ + V Sbjct: 60 NGLELVKKVRAEKKYEDMPIIMVTTEGGKAEVITALKAGVNNYIVKPFTPQVLKEKLEDV 119
>P51343:YCF29_PORPU Probable transcriptional regulator ycf29 - Porphyra purpurea| Length = 209 Score = 53.5 bits (127), Expect = 4e-06 Identities = 33/130 (25%), Positives = 64/130 (49%) Frame = +1 Query: 283 MPVRVLLAEGDDSTRHVISALLRKCGYHVSAASDGVKAWELLKEKSFKIDLVLTEVELPS 462 M ++L E D I L G++V A +G++A++L + +K DL+++++ +P Sbjct: 1 MSYNLMLVENDTVLSKAIQEYLIDQGFNVDIALNGLEAFQLANK--YKFDLIISDIIMPI 58 Query: 463 MSGFLLLSTIMEHDACKNIPVIMMSSNDAVSMVFKCMLKGAADFLVKPIRKNELRNLWQH 642 + G+ LL + + D IPVI +++ K G +L KP EL +L ++ Sbjct: 59 IDGYELLEKLRKIDKLAKIPVIFLTAKGMTKDRIKGYNMGCYGYLSKPFDPEELVSLIKN 118 Query: 643 VWRKQLANGE 672 + + N + Sbjct: 119 LIYRDSLNSQ 128
>P22104:TCTD_SALTY Transcriptional regulatory protein tctD - Salmonella typhimurium| Length = 224 Score = 53.5 bits (127), Expect = 4e-06 Identities = 49/193 (25%), Positives = 88/193 (45%), Gaps = 6/193 (3%) Frame = +1 Query: 289 VRVLLAEGDDSTRHVISALLRKCGYHVSAASDGVKAWELLKEKSFKIDLVLTEVELPSMS 468 +R+LLAE + H + L + G+ V DG+ A LL + + L + ++ +P M Sbjct: 1 MRLLLAEDNRELAHWLEKALVQNGFAVDCVFDGLAADHLLHSEMYA--LAVLDINMPGMD 58 Query: 469 GFLLLSTIMEHDACKNIPVIMMSSNDAVSMVFKCMLKGAADFLVKPIRKNELRNLWQHVW 648 G ++ + + + +PV+++++ AV+ K + GA D+L KP EL + + Sbjct: 59 GLEVVQRLRKRG--QTLPVLLLTARSAVADRVKGLNVGADDYLPKPFELEELDARLRALL 116 Query: 649 RKQLANGEIDVQQIQQ----EENVAEQHGRKTEATKAEHSTQNVV--RKNRECSEQESDA 810 R+ A +VQQ+ + +E G+ T E + V+ R+ R S Q+ Sbjct: 117 RRS-AGQVHEVQQLGELIFHDEGYFLLQGQPLALTPREQALLTVLMYRRTRPVSRQQLFE 175 Query: 811 QSSCTRSEPEAES 849 Q E ES Sbjct: 176 QVFSLNDEVSPES 188
>P0C0F6:RPFC_XANCP Sensory/regulatory protein rpfC - Xanthomonas campestris pv.| campestris Length = 677 Score = 53.5 bits (127), Expect = 4e-06 Identities = 37/146 (25%), Positives = 71/146 (48%), Gaps = 4/146 (2%) Frame = +1 Query: 289 VRVLLAEGDDSTRHVISALLRKCGYHVSAASDGVKAWELLKEKSFKIDLVLTEVELPSMS 468 +R+L+A+ ++ R V+ LL K G+ V + + + + E+ + D V+ ++ +P M+ Sbjct: 413 MRMLVADDHEANRMVLQRLLEKAGHKVLCVNGAEQVLDAMAEEDY--DAVIVDLHMPGMN 470 Query: 469 GFLLLST--IMEHDACKNIPVIMMSSNDAVSMVFKCMLKGAADFLVKPIRKNELRNLWQH 642 G +L +M+ + PV+++S++ + C GA FL KP+ +L + Sbjct: 471 GLDMLKQLRVMQASGMRYTPVVVLSADVTPEAIRACEQAGARAFLAKPVVAAKLLDTLAD 530 Query: 643 --VWRKQLANGEIDVQQIQQEENVAE 714 V +QLA VQ E V + Sbjct: 531 LAVSTRQLATPATTVQVATSFEGVLD 556
>P10576:NTRC_BRASR Nitrogen assimilation regulatory protein - Bradyrhizobium sp.| (strain RP501 Parasponia) Length = 480 Score = 53.5 bits (127), Expect = 4e-06 Identities = 33/110 (30%), Positives = 56/110 (50%) Frame = +1 Query: 295 VLLAEGDDSTRHVISALLRKCGYHVSAASDGVKAWELLKEKSFKIDLVLTEVELPSMSGF 474 +L+A+ D + R V++ L + GY V + W + + DLV+T+V +P + F Sbjct: 6 ILVADDDTAIRTVLNQALSRAGYEVRLTGNAATLWRWVSQGEG--DLVITDVVMPDENAF 63 Query: 475 LLLSTIMEHDACKNIPVIMMSSNDAVSMVFKCMLKGAADFLVKPIRKNEL 624 LL I + N+PVI+MS+ + + +GA ++L KP EL Sbjct: 64 DLLPRIKKMRP--NLPVIVMSAQNTFMTAIRPSERGAYEYLPKPFDLKEL 111
>Q8LG76:COL6_ARATH Zinc finger protein CONSTANS-LIKE 6 - Arabidopsis thaliana (Mouse-ear| cress) Length = 406 Score = 53.5 bits (127), Expect = 4e-06 Identities = 23/43 (53%), Positives = 35/43 (81%) Frame = +1 Query: 1843 REIALNKFRLKRKERCFEKKVRYQSRKLLAEQRPRVKGQFVRQ 1971 RE ++++R KR+ R F KK+RY+ RKL AE+RPR+KG+FV++ Sbjct: 357 REARVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFVKR 399
>Q9RC52:CITT_BACHD Transcriptional regulatory protein citT - Bacillus halodurans| Length = 230 Score = 53.5 bits (127), Expect = 4e-06 Identities = 38/140 (27%), Positives = 74/140 (52%), Gaps = 3/140 (2%) Frame = +1 Query: 292 RVLLAEGDDSTRHVISALLRKCGYH--VSAASDGVKAWELLKEKSFKIDLVLTEVELPSM 465 +VL+ E D + ++ Y +S G +A + L EK+ +DL+L +V +P + Sbjct: 6 KVLIIEDDFRVAQIQEQMVNDHPYFHVISTCRTGGEALDYLSEKAAALDLILLDVYIPDV 65 Query: 466 SGFLLLSTIMEHDACKNIPVIMMSSNDAVSMVFKCMLKGAADFLVKPIRKNEL-RNLWQH 642 G LL I E +++ ++M+++ V V + + G D+L+KP++K L + L + Sbjct: 66 KGLELLWAIREK--FRDVDIMMVTAAKEVDTVQEALRGGIIDYLLKPVQKEVLHQRLDAY 123 Query: 643 VWRKQLANGEIDVQQIQQEE 702 V +++L + +Q+ QEE Sbjct: 124 VQKRELFG---ERRQVSQEE 140
>P59342:BARA_SHIFL Signal transduction histidine-protein kinase barA - Shigella flexneri| Length = 918 Score = 53.5 bits (127), Expect = 4e-06 Identities = 32/117 (27%), Positives = 56/117 (47%) Frame = +1 Query: 283 MPVRVLLAEGDDSTRHVISALLRKCGYHVSAASDGVKAWELLKEKSFKIDLVLTEVELPS 462 + + V+ + + + +I ALL HV G +A E K+ F DL+L ++++P Sbjct: 666 LAMTVMAVDDNPANLKLIGALLEDMVQHVELCDSGHQAVERAKQMPF--DLILMDIQMPD 723 Query: 463 MSGFLLLSTIMEHDACKNIPVIMMSSNDAVSMVFKCMLKGAADFLVKPIRKNELRNL 633 M G I + + PVI ++++ K + G +D+L KPI + L NL Sbjct: 724 MDGIRACELIHQLPHQRQTPVIAVTAHAMAGQKEKLLGAGMSDYLAKPIEEERLHNL 780
>Q9TLQ4:YCF27_CYACA Probable transcriptional regulator ycf27 - Cyanidium caldarium| Length = 249 Score = 53.1 bits (126), Expect = 5e-06 Identities = 32/120 (26%), Positives = 64/120 (53%) Frame = +1 Query: 295 VLLAEGDDSTRHVISALLRKCGYHVSAASDGVKAWELLKEKSFKIDLVLTEVELPSMSGF 474 +L+ + +++ R ++ L GY VS A +G +A ++ S IDL++ +V +P + G+ Sbjct: 14 LLIVDDENNIRKILQTRLTLLGYSVSTACNGEEALKIFTTHS--IDLIILDVMMPKLDGY 71 Query: 475 LLLSTIMEHDACKNIPVIMMSSNDAVSMVFKCMLKGAADFLVKPIRKNELRNLWQHVWRK 654 + I + +IP+IM+++ + V + GA D+++KP EL Q + R+ Sbjct: 72 GVCQEIRKES---DIPIIMLTALEDVLDKVTGLELGADDYVIKPFSPRELEARIQSILRR 128
>Q8NXX6:SDRD_STAAW Serine-aspartate repeat-containing protein D precursor -| Staphylococcus aureus (strain MW2) Length = 1347 Score = 53.1 bits (126), Expect = 5e-06 Identities = 37/144 (25%), Positives = 67/144 (46%), Gaps = 7/144 (4%) Frame = +1 Query: 661 ANGEIDVQQIQQEENVAEQHGRKTEATKAEHSTQN---VVRKNRECSEQESDAQSSCTRS 831 ++ ++D+QQ+ QE+N + ++ +++ +T N + K S + + S +S Sbjct: 72 SSDKVDMQQLNQEDNTKNDNQKEMVSSQGNETTSNGNKSIEKESVQSTTGNKVEVSTAKS 131 Query: 832 EPEAESKHTNSFLEFKQITERQSSTDP----KNTVENRDPENPSENKRKKASTDIEVVHI 999 + +A K TN L KQ Q + P +V N P N ENK+ A T+ +++ Sbjct: 132 DEQASPKSTNEDLNTKQTISNQEALQPDLQENKSVVNAQPTN-EENKKVDAKTESTTLNV 190 Query: 1000 IDDAPKPSTMEVDIVRTNSKGNGD 1071 DA K + +V NS N + Sbjct: 191 KSDAIKSNA--ETLVDNNSNSNNE 212
>Q6GBS5:SDRD_STAAS Serine-aspartate repeat-containing protein D precursor -| Staphylococcus aureus (strain MSSA476) Length = 1365 Score = 53.1 bits (126), Expect = 5e-06 Identities = 37/144 (25%), Positives = 67/144 (46%), Gaps = 7/144 (4%) Frame = +1 Query: 661 ANGEIDVQQIQQEENVAEQHGRKTEATKAEHSTQN---VVRKNRECSEQESDAQSSCTRS 831 ++ ++D+QQ+ QE+N + ++ +++ +T N + K S + + S +S Sbjct: 72 SSDKVDMQQLNQEDNTKNDNQKEMVSSQGNETTSNGNKSIEKESVQSTTGNKVEVSTAKS 131 Query: 832 EPEAESKHTNSFLEFKQITERQSSTDP----KNTVENRDPENPSENKRKKASTDIEVVHI 999 + +A K TN L KQ Q + P +V N P N ENK+ A T+ +++ Sbjct: 132 DEQASPKSTNEDLNTKQTISNQEALQPDLQENKSVVNAQPTN-EENKKVDAKTESTTLNV 190 Query: 1000 IDDAPKPSTMEVDIVRTNSKGNGD 1071 DA K + +V NS N + Sbjct: 191 KSDAIKSNA--ETLVDNNSNSNNE 212
>Q940T9:COL4_ARATH Zinc finger protein CONSTANS-LIKE 4 - Arabidopsis thaliana (Mouse-ear| cress) Length = 362 Score = 53.1 bits (126), Expect = 5e-06 Identities = 24/59 (40%), Positives = 38/59 (64%) Frame = +1 Query: 1837 SQREIALNKFRLKRKERCFEKKVRYQSRKLLAEQRPRVKGQFVRQDQSVQGSS*MSPAG 2013 ++RE + ++R KRK R FEK +RY SRK AE RPR+KG+F ++ + + + + G Sbjct: 293 AEREARVMRYREKRKNRKFEKTIRYASRKAYAEMRPRIKGRFAKRTDTNESNDVVGHGG 351
>P0AEC5:BARA_ECOLI Signal transduction histidine-protein kinase barA - Escherichia coli| Length = 918 Score = 53.1 bits (126), Expect = 5e-06 Identities = 32/117 (27%), Positives = 56/117 (47%) Frame = +1 Query: 283 MPVRVLLAEGDDSTRHVISALLRKCGYHVSAASDGVKAWELLKEKSFKIDLVLTEVELPS 462 + + V+ + + + +I ALL HV G +A E K+ F DL+L ++++P Sbjct: 666 LAMTVMAVDDNPANLKLIGALLEDMVQHVELCDSGHQAVERAKQMPF--DLILMDIQMPD 723 Query: 463 MSGFLLLSTIMEHDACKNIPVIMMSSNDAVSMVFKCMLKGAADFLVKPIRKNELRNL 633 M G I + + PVI ++++ K + G +D+L KPI + L NL Sbjct: 724 MDGIRACELIHQLPHQQQTPVIAVTAHAMAGQKEKLLGAGMSDYLAKPIEEERLHNL 780
>P0AEC6:BARA_ECOL6 Signal transduction histidine-protein kinase barA - Escherichia coli| O6 Length = 918 Score = 53.1 bits (126), Expect = 5e-06 Identities = 32/117 (27%), Positives = 56/117 (47%) Frame = +1 Query: 283 MPVRVLLAEGDDSTRHVISALLRKCGYHVSAASDGVKAWELLKEKSFKIDLVLTEVELPS 462 + + V+ + + + +I ALL HV G +A E K+ F DL+L ++++P Sbjct: 666 LAMTVMAVDDNPANLKLIGALLEDMVQHVELCDSGHQAVERAKQMPF--DLILMDIQMPD 723 Query: 463 MSGFLLLSTIMEHDACKNIPVIMMSSNDAVSMVFKCMLKGAADFLVKPIRKNELRNL 633 M G I + + PVI ++++ K + G +D+L KPI + L NL Sbjct: 724 MDGIRACELIHQLPHQQQTPVIAVTAHAMAGQKEKLLGAGMSDYLAKPIEEERLHNL 780
>P0AEC7:BARA_ECO57 Signal transduction histidine-protein kinase barA - Escherichia coli| O157:H7 Length = 918 Score = 53.1 bits (126), Expect = 5e-06 Identities = 32/117 (27%), Positives = 56/117 (47%) Frame = +1 Query: 283 MPVRVLLAEGDDSTRHVISALLRKCGYHVSAASDGVKAWELLKEKSFKIDLVLTEVELPS 462 + + V+ + + + +I ALL HV G +A E K+ F DL+L ++++P Sbjct: 666 LAMTVMAVDDNPANLKLIGALLEDMVQHVELCDSGHQAVERAKQMPF--DLILMDIQMPD 723 Query: 463 MSGFLLLSTIMEHDACKNIPVIMMSSNDAVSMVFKCMLKGAADFLVKPIRKNELRNL 633 M G I + + PVI ++++ K + G +D+L KPI + L NL Sbjct: 724 MDGIRACELIHQLPHQQQTPVIAVTAHAMAGQKEKLLGAGMSDYLAKPIEEERLHNL 780
>P48359:YCF29_CYAPA Probable transcriptional regulator ycf29 - Cyanophora paradoxa| Length = 210 Score = 52.8 bits (125), Expect = 7e-06 Identities = 29/112 (25%), Positives = 56/112 (50%) Frame = +1 Query: 289 VRVLLAEGDDSTRHVISALLRKCGYHVSAASDGVKAWELLKEKSFKIDLVLTEVELPSMS 468 + +L+ + D R+ + L + G+HV ++ +AW++LK K KIDL++ ++ +P M Sbjct: 2 INILILDTDIGIRNSLKLYLTEIGFHVEESTCVDQAWDILKRK--KIDLIICDIIMPGMG 59 Query: 469 GFLLLSTIMEHDACKNIPVIMMSSNDAVSMVFKCMLKGAADFLVKPIRKNEL 624 GF L + + +PVI++++ G ++ KP EL Sbjct: 60 GFNFLHQLRLNTDYCTLPVILLTTRGLTQDRIIGYKTGCDSYISKPFNIEEL 111
>Q9A5I5:PLED_CAUCR Response regulator pleD - Caulobacter crescentus (Caulobacter| vibrioides) Length = 454 Score = 52.8 bits (125), Expect = 7e-06 Identities = 31/109 (28%), Positives = 56/109 (51%) Frame = +1 Query: 283 MPVRVLLAEGDDSTRHVISALLRKCGYHVSAASDGVKAWELLKEKSFKIDLVLTEVELPS 462 M R+L+ + ++ ++ A L Y VS A DG A + D++L +V +P Sbjct: 1 MSARILVVDDIEANVRLLEAKLTAEYYEVSTAMDGPTALAMAARDL--PDIILLDVMMPG 58 Query: 463 MSGFLLLSTIMEHDACKNIPVIMMSSNDAVSMVFKCMLKGAADFLVKPI 609 M GF + + + ++IPV+++++ D + + GA+DFL KPI Sbjct: 59 MDGFTVCRKLKDDPTTRHIPVVLITALDGRGDRIQGLESGASDFLTKPI 107
>Q9FHH8:COL5_ARATH Zinc finger protein CONSTANS-LIKE 5 - Arabidopsis thaliana (Mouse-ear| cress) Length = 355 Score = 52.8 bits (125), Expect = 7e-06 Identities = 28/69 (40%), Positives = 42/69 (60%), Gaps = 3/69 (4%) Frame = +1 Query: 1783 NASDGATENPSMEGLHHLSQ---REIALNKFRLKRKERCFEKKVRYQSRKLLAEQRPRVK 1953 N+ + +T S G H + RE + ++R KRK R FEK +RY SRK AE RPR+K Sbjct: 262 NSVNRSTITSSTTGGDHQASSMDREARVLRYREKRKNRKFEKTIRYASRKAYAESRPRIK 321 Query: 1954 GQFVRQDQS 1980 G+F ++ ++ Sbjct: 322 GRFAKRTET 330
>P62640:CHEB3_GEOSL Chemotaxis response regulator protein-glutamate methylesterase of| group 3 operon - Geobacter sulfurreducens Length = 371 Score = 52.8 bits (125), Expect = 7e-06 Identities = 45/164 (27%), Positives = 79/164 (48%), Gaps = 10/164 (6%) Frame = +1 Query: 280 MMPVRVLLAEGDDSTRHVISALLRKCGYH--VSAASDGVKAWELLKEKSFKIDLVLTEVE 453 M +RV++ + +R I+ +L + A+DG + + K K DLV ++E Sbjct: 1 MRKIRVVVIDDSAYSRRAITKMLESMPEVEVIGYATDGEEG--IRKIIDLKPDLVTLDLE 58 Query: 454 LPSMSGFLLLSTIMEHDACKNIPVIMMSSNDAVSMVFKCMLKGAADFLVKPIR--KNELR 627 +P M GF LL +ME+ VI++SS VF+ + GA DF+ KP + E+ Sbjct: 59 MPRMDGFTLLRIVMEYSP---TAVIVISSRSEDEKVFRALELGAVDFVAKPTKGVSEEIL 115 Query: 628 NLWQHVWRKQLANGEID------VQQIQQEENVAEQHGRKTEAT 741 + + + RK G I V++ +++E + GR+T + Sbjct: 116 TIREDLHRK--VRGVIHLNLAGIVRREREQERASVAAGRRTSGS 157
>Q7A780:SDRD_STAAN Serine-aspartate repeat-containing protein D precursor -| Staphylococcus aureus (strain N315) Length = 1385 Score = 52.4 bits (124), Expect = 9e-06 Identities = 42/187 (22%), Positives = 78/187 (41%), Gaps = 7/187 (3%) Frame = +1 Query: 661 ANGEIDVQQIQQEENVAEQHGRKTEATKAEHSTQN---VVRKNRECSEQESDAQSSCTRS 831 ++ ++D+QQ+ QE+N + ++ +++ +T N + K S + + S +S Sbjct: 72 SSDKVDMQQLNQEDNTKNDNQKEMVSSQGNETTSNGNKSIEKESVQSTTGNKVEVSTAKS 131 Query: 832 EPEAESKHTNSFLEFKQITERQSSTDP----KNTVENRDPENPSENKRKKASTDIEVVHI 999 + +A K TN L KQ Q P +V N P N ENK+ A T+ +++ Sbjct: 132 DEQASPKSTNEDLNTKQTISNQEGLQPDLLENKSVVNVQPTN-EENKKVDAKTESTTLNV 190 Query: 1000 IDDAPKPSTMEVDIVRTNSKGNGDKWFSIPAHQLELSLRRSDYGRSEDQEKNDTRTLNHS 1179 DA K + + +NS + +P SL + D++ +N Sbjct: 191 KSDAIKSNAETLVDNNSNSNNENNADIILPKSTAPKSLNTRMRMAAIQPNSTDSKNVNDL 250 Query: 1180 TASAFSL 1200 S +L Sbjct: 251 ITSNTTL 257
>Q99W47:SDRD_STAAM Serine-aspartate repeat-containing protein D precursor -| Staphylococcus aureus (strain Mu50 / ATCC 700699) Length = 1385 Score = 52.4 bits (124), Expect = 9e-06 Identities = 42/187 (22%), Positives = 78/187 (41%), Gaps = 7/187 (3%) Frame = +1 Query: 661 ANGEIDVQQIQQEENVAEQHGRKTEATKAEHSTQN---VVRKNRECSEQESDAQSSCTRS 831 ++ ++D+QQ+ QE+N + ++ +++ +T N + K S + + S +S Sbjct: 72 SSDKVDMQQLNQEDNTKNDNQKEMVSSQGNETTSNGNKSIEKESVQSTTGNKVEVSTAKS 131 Query: 832 EPEAESKHTNSFLEFKQITERQSSTDP----KNTVENRDPENPSENKRKKASTDIEVVHI 999 + +A K TN L KQ Q P +V N P N ENK+ A T+ +++ Sbjct: 132 DEQASPKSTNEDLNTKQTISNQEGLQPDLLENKSVVNVQPTN-EENKKVDAKTESTTLNV 190 Query: 1000 IDDAPKPSTMEVDIVRTNSKGNGDKWFSIPAHQLELSLRRSDYGRSEDQEKNDTRTLNHS 1179 DA K + + +NS + +P SL + D++ +N Sbjct: 191 KSDAIKSNAETLVDNNSNSNNENNADIILPKSTAPKSLNTRMRMAAIQPNSTDSKNVNDL 250 Query: 1180 TASAFSL 1200 S +L Sbjct: 251 ITSNTTL 257
>Q47744:VANR_ENTFA Regulatory protein vanRB - Enterococcus faecalis (Streptococcus| faecalis) Length = 220 Score = 52.0 bits (123), Expect = 1e-05 Identities = 33/110 (30%), Positives = 56/110 (50%) Frame = +1 Query: 283 MPVRVLLAEGDDSTRHVISALLRKCGYHVSAASDGVKAWELLKEKSFKIDLVLTEVELPS 462 M +R+LL E DD + + A L + Y V A +DG +A E +++ LV+ ++ LP Sbjct: 1 MSIRILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENTYQ--LVILDIMLPG 58 Query: 463 MSGFLLLSTIMEHDACKNIPVIMMSSNDAVSMVFKCMLKGAADFLVKPIR 612 M+G LL E A + P++MM++ + A D++ KP + Sbjct: 59 MNGHELL---REFRAQNDTPILMMTALSDDENQIRAFDAEADDYVTKPFK 105
>O14283:PRR1_SCHPO Transcription factor prr1 - Schizosaccharomyces pombe (Fission| yeast) Length = 539 Score = 52.0 bits (123), Expect = 1e-05 Identities = 38/125 (30%), Positives = 60/125 (48%) Frame = +1 Query: 292 RVLLAEGDDSTRHVISALLRKCGYHVSAASDGVKAWELLKEKSFKIDLVLTEVELPSMSG 471 R+LL E D+ +R + L V A DG+ A + K + DL+L + LP++ G Sbjct: 369 RILLVEDDELSRRMTIKFLTSFDCQVDVAVDGIGA--VNKANAGGFDLILMDFILPNLDG 426 Query: 472 FLLLSTIMEHDACKNIPVIMMSSNDAVSMVFKCMLKGAADFLVKPIRKNELRNLWQHVWR 651 + I ++D N P++ ++SN +++ G D LVKP K L L + Sbjct: 427 LSVTCLIRQYD--HNTPILAITSNISMNDAVTYFNHGVTDLLVKPFTKLTLLQL----LK 480 Query: 652 KQLAN 666 KQL N Sbjct: 481 KQLLN 485
>P0A5Z4:MTRA_MYCTU DNA-binding response regulator mtrA - Mycobacterium tuberculosis| Length = 225 Score = 52.0 bits (123), Expect = 1e-05 Identities = 31/114 (27%), Positives = 60/114 (52%) Frame = +1 Query: 283 MPVRVLLAEGDDSTRHVISALLRKCGYHVSAASDGVKAWELLKEKSFKIDLVLTEVELPS 462 M R+L+ + D S +++ +LR G+ + DG +A ++E + DLVL ++ LP Sbjct: 1 MRQRILVVDDDASLAEMLTIVLRGEGFDTAVIGDGTQALTAVRE--LRPDLVLLDLMLPG 58 Query: 463 MSGFLLLSTIMEHDACKNIPVIMMSSNDAVSMVFKCMLKGAADFLVKPIRKNEL 624 M+G + + A +P++M+++ V + GA D+++KP + EL Sbjct: 59 MNGIDVCRVLR---ADSGVPIVMLTAKTDTVDVVLGLESGADDYIMKPFKPKEL 109
>Q93CB8:MTRA_MYCPA DNA-binding response regulator mtrA - Mycobacterium| paratuberculosis Length = 225 Score = 52.0 bits (123), Expect = 1e-05 Identities = 31/114 (27%), Positives = 60/114 (52%) Frame = +1 Query: 283 MPVRVLLAEGDDSTRHVISALLRKCGYHVSAASDGVKAWELLKEKSFKIDLVLTEVELPS 462 M R+L+ + D S +++ +LR G+ + DG +A ++E + DLVL ++ LP Sbjct: 1 MRQRILVVDDDASLAEMLTIVLRGEGFDTAVIGDGTQALTAVRE--LRPDLVLLDLMLPG 58 Query: 463 MSGFLLLSTIMEHDACKNIPVIMMSSNDAVSMVFKCMLKGAADFLVKPIRKNEL 624 M+G + + A +P++M+++ V + GA D+++KP + EL Sbjct: 59 MNGIDVCRVLR---ADSGVPIVMLTAKTDTVDVVLGLESGADDYIMKPFKPKEL 109
>Q9CCJ2:MTRA_MYCLE DNA-binding response regulator mtrA - Mycobacterium leprae| Length = 225 Score = 52.0 bits (123), Expect = 1e-05 Identities = 31/114 (27%), Positives = 60/114 (52%) Frame = +1 Query: 283 MPVRVLLAEGDDSTRHVISALLRKCGYHVSAASDGVKAWELLKEKSFKIDLVLTEVELPS 462 M R+L+ + D S +++ +LR G+ + DG +A ++E + DLVL ++ LP Sbjct: 1 MRQRILVVDDDASLAEMLTIVLRGEGFDTAVIGDGTQALTAVRE--LRPDLVLLDLMLPG 58 Query: 463 MSGFLLLSTIMEHDACKNIPVIMMSSNDAVSMVFKCMLKGAADFLVKPIRKNEL 624 M+G + + A +P++M+++ V + GA D+++KP + EL Sbjct: 59 MNGIDVCRVLR---ADSGVPIVMLTAKTDTVDVVLGLESGADDYIMKPFKPKEL 109
>P0A5Z5:MTRA_MYCBO DNA-binding response regulator mtrA - Mycobacterium bovis| Length = 225 Score = 52.0 bits (123), Expect = 1e-05 Identities = 31/114 (27%), Positives = 60/114 (52%) Frame = +1 Query: 283 MPVRVLLAEGDDSTRHVISALLRKCGYHVSAASDGVKAWELLKEKSFKIDLVLTEVELPS 462 M R+L+ + D S +++ +LR G+ + DG +A ++E + DLVL ++ LP Sbjct: 1 MRQRILVVDDDASLAEMLTIVLRGEGFDTAVIGDGTQALTAVRE--LRPDLVLLDLMLPG 58 Query: 463 MSGFLLLSTIMEHDACKNIPVIMMSSNDAVSMVFKCMLKGAADFLVKPIRKNEL 624 M+G + + A +P++M+++ V + GA D+++KP + EL Sbjct: 59 MNGIDVCRVLR---ADSGVPIVMLTAKTDTVDVVLGLESGADDYIMKPFKPKEL 109
>Q9K621:BCER_BACHD Sensory transduction protein bceR - Bacillus halodurans| Length = 231 Score = 52.0 bits (123), Expect = 1e-05 Identities = 45/160 (28%), Positives = 67/160 (41%), Gaps = 7/160 (4%) Frame = +1 Query: 292 RVLLAEGDDSTRHVISALLRKCGYHVSAASDGVKAWELLKEKSFKIDLVLTEVELPSMSG 471 +++L E D + I L + Y V S+ K E + S K DLV+ +++LP G Sbjct: 3 KIMLIEDDHTLFSEIKERLSQWSYDVFGVSNFEKVIE--EFTSLKPDLVIIDIQLPKFDG 60 Query: 472 FLLLSTIMEHDACKNIPVIMMSSNDAVSMVFKCMLKGAADFLVKPIRKNELRNLWQHVWR 651 F I +H N+P+I +SS D + + M GA DF+ KP + L Q + R Sbjct: 61 FHWCRMIRQHS---NVPIIFLSSRDHPTDMVMSMQLGADDFIQKPFHFDVLVAKIQAILR 117 Query: 652 KQLANGEIDVQ-------QIQQEENVAEQHGRKTEATKAE 750 + Q I E N H E +K E Sbjct: 118 RVHNYTSEQTQLKTWCGATIDYESNTVSNHVGSIELSKNE 157
>O78428:YCF27_GUITH Probable transcriptional regulator ycf27 - Guillardia theta| (Cryptomonas phi) Length = 254 Score = 51.6 bits (122), Expect = 2e-05 Identities = 33/121 (27%), Positives = 63/121 (52%) Frame = +1 Query: 292 RVLLAEGDDSTRHVISALLRKCGYHVSAASDGVKAWELLKEKSFKIDLVLTEVELPSMSG 471 +VL+ + + S R ++ L GY V ASDG +A L ++ D+V+ ++ +P + G Sbjct: 16 KVLIVDDEASIRKILETRLSMIGYFVVTASDGEEALNLFHQE--MPDVVILDIMMPKLDG 73 Query: 472 FLLLSTIMEHDACKNIPVIMMSSNDAVSMVFKCMLKGAADFLVKPIRKNELRNLWQHVWR 651 + + I + ++P+IM+++ V+ + GA D++VKP EL + V R Sbjct: 74 YGVCQEIRKD---SDVPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRAVLR 130 Query: 652 K 654 + Sbjct: 131 R 131
>P0A2D5:CHEY_SALTY Chemotaxis protein cheY - Salmonella typhimurium| Length = 129 Score = 51.6 bits (122), Expect = 2e-05 Identities = 31/123 (25%), Positives = 60/123 (48%), Gaps = 1/123 (0%) Frame = +1 Query: 289 VRVLLAEGDDSTRHVISALLRKCGYH-VSAASDGVKAWELLKEKSFKIDLVLTEVELPSM 465 ++ L+ + + R ++ LL++ G++ V A DGV A L+ F ++++ +P+M Sbjct: 6 LKFLVVDDFSTMRRIVRNLLKELGFNNVEEAEDGVDALNKLQAGGF--GFIISDWNMPNM 63 Query: 466 SGFLLLSTIMEHDACKNIPVIMMSSNDAVSMVFKCMLKGAADFLVKPIRKNELRNLWQHV 645 G LL TI A +PV+M+++ + GA+ ++VKP L + Sbjct: 64 DGLELLKTIRADSAMSALPVLMVTAEAKKENIIAAAQAGASGYVVKPFTAATLEEKLNKI 123 Query: 646 WRK 654 + K Sbjct: 124 FEK 126
>P0A2D6:CHEY_SALTI Chemotaxis protein cheY - Salmonella typhi| Length = 129 Score = 51.6 bits (122), Expect = 2e-05 Identities = 31/123 (25%), Positives = 60/123 (48%), Gaps = 1/123 (0%) Frame = +1 Query: 289 VRVLLAEGDDSTRHVISALLRKCGYH-VSAASDGVKAWELLKEKSFKIDLVLTEVELPSM 465 ++ L+ + + R ++ LL++ G++ V A DGV A L+ F ++++ +P+M Sbjct: 6 LKFLVVDDFSTMRRIVRNLLKELGFNNVEEAEDGVDALNKLQAGGF--GFIISDWNMPNM 63 Query: 466 SGFLLLSTIMEHDACKNIPVIMMSSNDAVSMVFKCMLKGAADFLVKPIRKNELRNLWQHV 645 G LL TI A +PV+M+++ + GA+ ++VKP L + Sbjct: 64 DGLELLKTIRADSAMSALPVLMVTAEAKKENIIAAAQAGASGYVVKPFTAATLEEKLNKI 123 Query: 646 WRK 654 + K Sbjct: 124 FEK 126
>P0A9Q4:ARCA_SHIFL Aerobic respiration control protein arcA - Shigella flexneri| Length = 238 Score = 51.6 bits (122), Expect = 2e-05 Identities = 31/115 (26%), Positives = 57/115 (49%) Frame = +1 Query: 280 MMPVRVLLAEGDDSTRHVISALLRKCGYHVSAASDGVKAWELLKEKSFKIDLVLTEVELP 459 M +L+ E + TR+ + ++ GY V A+DG + ++L E + I+LV+ ++ LP Sbjct: 1 MQTPHILIVEDELVTRNTLKSIFEAEGYDVFEATDGAEMHQILSE--YDINLVIMDINLP 58 Query: 460 SMSGFLLLSTIMEHDACKNIPVIMMSSNDAVSMVFKCMLKGAADFLVKPIRKNEL 624 +G LL + E N+ ++ ++ D + GA D++ KP EL Sbjct: 59 GKNGLLLARELREQ---ANVALMFLTGRDNEVDKILGLEIGADDYITKPFNPREL 110
>P0A9Q1:ARCA_ECOLI Aerobic respiration control protein arcA - Escherichia coli| Length = 238 Score = 51.6 bits (122), Expect = 2e-05 Identities = 31/115 (26%), Positives = 57/115 (49%) Frame = +1 Query: 280 MMPVRVLLAEGDDSTRHVISALLRKCGYHVSAASDGVKAWELLKEKSFKIDLVLTEVELP 459 M +L+ E + TR+ + ++ GY V A+DG + ++L E + I+LV+ ++ LP Sbjct: 1 MQTPHILIVEDELVTRNTLKSIFEAEGYDVFEATDGAEMHQILSE--YDINLVIMDINLP 58 Query: 460 SMSGFLLLSTIMEHDACKNIPVIMMSSNDAVSMVFKCMLKGAADFLVKPIRKNEL 624 +G LL + E N+ ++ ++ D + GA D++ KP EL Sbjct: 59 GKNGLLLARELREQ---ANVALMFLTGRDNEVDKILGLEIGADDYITKPFNPREL 110
>P0A9Q2:ARCA_ECOL6 Aerobic respiration control protein arcA - Escherichia coli O6| Length = 238 Score = 51.6 bits (122), Expect = 2e-05 Identities = 31/115 (26%), Positives = 57/115 (49%) Frame = +1 Query: 280 MMPVRVLLAEGDDSTRHVISALLRKCGYHVSAASDGVKAWELLKEKSFKIDLVLTEVELP 459 M +L+ E + TR+ + ++ GY V A+DG + ++L E + I+LV+ ++ LP Sbjct: 1 MQTPHILIVEDELVTRNTLKSIFEAEGYDVFEATDGAEMHQILSE--YDINLVIMDINLP 58 Query: 460 SMSGFLLLSTIMEHDACKNIPVIMMSSNDAVSMVFKCMLKGAADFLVKPIRKNEL 624 +G LL + E N+ ++ ++ D + GA D++ KP EL Sbjct: 59 GKNGLLLARELREQ---ANVALMFLTGRDNEVDKILGLEIGADDYITKPFNPREL 110
>P0A9Q3:ARCA_ECO57 Aerobic respiration control protein arcA - Escherichia coli O157:H7| Length = 238 Score = 51.6 bits (122), Expect = 2e-05 Identities = 31/115 (26%), Positives = 57/115 (49%) Frame = +1 Query: 280 MMPVRVLLAEGDDSTRHVISALLRKCGYHVSAASDGVKAWELLKEKSFKIDLVLTEVELP 459 M +L+ E + TR+ + ++ GY V A+DG + ++L E + I+LV+ ++ LP Sbjct: 1 MQTPHILIVEDELVTRNTLKSIFEAEGYDVFEATDGAEMHQILSE--YDINLVIMDINLP 58 Query: 460 SMSGFLLLSTIMEHDACKNIPVIMMSSNDAVSMVFKCMLKGAADFLVKPIRKNEL 624 +G LL + E N+ ++ ++ D + GA D++ KP EL Sbjct: 59 GKNGLLLARELREQ---ANVALMFLTGRDNEVDKILGLEIGADDYITKPFNPREL 110
>P45365:YPH5_THIVI Uncharacterized 76.5 kDa protein in phbC 3'region - Thiocystis| violacea Length = 692 Score = 51.2 bits (121), Expect = 2e-05 Identities = 31/111 (27%), Positives = 54/111 (48%) Frame = +1 Query: 292 RVLLAEGDDSTRHVISALLRKCGYHVSAASDGVKAWELLKEKSFKIDLVLTEVELPSMSG 471 R+L+ E D S I++LL G D +K L + ++F+ +LVL ++ LP +G Sbjct: 139 RILILEQDASHAKKIASLLATIGMETLVVDDPMKI--LARMQAFRPNLVLMDLYLPGATG 196 Query: 472 FLLLSTIMEHDACKNIPVIMMSSNDAVSMVFKCMLKGAADFLVKPIRKNEL 624 L + I +HD IP++ +S + + G F+ KP+ + L Sbjct: 197 SELTTIIRDHDDFYGIPILFLSQEADLDKQLAALKAGGDGFIKKPVSREAL 247
>Q9ZHD3:SILR_SALTY Probable transcriptional regulatory protein silR - Salmonella| typhimurium Length = 228 Score = 51.2 bits (121), Expect = 2e-05 Identities = 32/112 (28%), Positives = 60/112 (53%) Frame = +1 Query: 289 VRVLLAEGDDSTRHVISALLRKCGYHVSAASDGVKAWELLKEKSFKIDLVLTEVELPSMS 468 +++L+ E D T +S L + G+ V A +G+ + L + DLV+ ++ LP ++ Sbjct: 1 MKILIVEDDIKTGEYLSKGLTEAGFVVDHADNGLTGYHLAMTAEY--DLVILDIMLPDVN 58 Query: 469 GFLLLSTIMEHDACKNIPVIMMSSNDAVSMVFKCMLKGAADFLVKPIRKNEL 624 G+ ++ M A K +PV+++++ + K + GA D+LVKP EL Sbjct: 59 GWDIIR--MLRSAGKGMPVLLLTALGTIEHRVKGLELGADDYLVKPFAFAEL 108
>P28835:YCF27_PORAE Probable transcriptional regulator ycf27 - Porphyridium aerugineum| Length = 240 Score = 50.8 bits (120), Expect = 3e-05 Identities = 32/125 (25%), Positives = 65/125 (52%) Frame = +1 Query: 280 MMPVRVLLAEGDDSTRHVISALLRKCGYHVSAASDGVKAWELLKEKSFKIDLVLTEVELP 459 M ++L+ + + S R ++ L GY V +A+DG +A + K + +LV+ ++ +P Sbjct: 1 MQKEKILVIDDEASIRRILETRLSIIGYDVISAADGEEALSIFKRE--HPNLVVLDLMMP 58 Query: 460 SMSGFLLLSTIMEHDACKNIPVIMMSSNDAVSMVFKCMLKGAADFLVKPIRKNELRNLWQ 639 + G+ + + + ++P+IM+++ VS + GA D++VKP EL + Sbjct: 59 KLDGYGVCQELRKE---SDVPIIMLTALSDVSDRITGLELGADDYIVKPFSPKELEARIR 115 Query: 640 HVWRK 654 V R+ Sbjct: 116 SVLRR 120
>Q56128:RCSC_SALTI Sensor protein rcsC - Salmonella typhi| Length = 948 Score = 50.8 bits (120), Expect = 3e-05 Identities = 30/111 (27%), Positives = 57/111 (51%) Frame = +1 Query: 295 VLLAEGDDSTRHVISALLRKCGYHVSAASDGVKAWELLKEKSFKIDLVLTEVELPSMSGF 474 +L+ + R +++ L GY A+DGV A +L + + ID+VL++V +P+M G+ Sbjct: 827 ILVVDDHPINRRLLADQLGSLGYQCKTANDGVDALNVLSKNA--IDIVLSDVNMPNMDGY 884 Query: 475 LLLSTIMEHDACKNIPVIMMSSNDAVSMVFKCMLKGAADFLVKPIRKNELR 627 L I + +PV+ +++N +C+ G L KP+ + L+ Sbjct: 885 RLTQRIRQLGL--TLPVVGVTANALAEEKQRCLESGMDSCLSKPVTLDALK 933
>P06628:SP0F_BACSU Sporulation initiation phosphotransferase F - Bacillus subtilis| Length = 124 Score = 50.4 bits (119), Expect = 3e-05 Identities = 31/117 (26%), Positives = 65/117 (55%) Frame = +1 Query: 280 MMPVRVLLAEGDDSTRHVISALLRKCGYHVSAASDGVKAWELLKEKSFKIDLVLTEVELP 459 MM ++L+ + R +++ + K GY A++G++A +++ ++ + DLVL ++++P Sbjct: 1 MMNEKILIVDDQYGIRILLNEVFNKEGYQTFQAANGLQALDIVTKE--RPDLVLLDMKIP 58 Query: 460 SMSGFLLLSTIMEHDACKNIPVIMMSSNDAVSMVFKCMLKGAADFLVKPIRKNELRN 630 M G +L + D +NI VI+M++ + M+ + GA KP +E+R+ Sbjct: 59 GMDGIEILKRMKVID--ENIRVIIMTAYGELDMIQESKELGALTHFAKPFDIDEIRD 113
>P58662:RCSC_SALTY Sensor protein rcsC - Salmonella typhimurium| Length = 948 Score = 50.4 bits (119), Expect = 3e-05 Identities = 30/111 (27%), Positives = 57/111 (51%) Frame = +1 Query: 295 VLLAEGDDSTRHVISALLRKCGYHVSAASDGVKAWELLKEKSFKIDLVLTEVELPSMSGF 474 +L+ + R +++ L GY A+DGV A +L + + ID+VL++V +P+M G+ Sbjct: 827 ILVVDDHPINRRLLADQLGSLGYQCKTANDGVDALNVLSKNA--IDIVLSDVNMPNMDGY 884 Query: 475 LLLSTIMEHDACKNIPVIMMSSNDAVSMVFKCMLKGAADFLVKPIRKNELR 627 L I + +PV+ +++N +C+ G L KP+ + L+ Sbjct: 885 RLTQRIRQLGL--TLPVVGVTANALAEEKQRCLESGMDSCLSKPVTLDVLK 933
>Q01473:RCAC_FREDI Protein rcaC - Fremyella diplosiphon (Calothrix PCC 7601)| Length = 651 Score = 50.4 bits (119), Expect = 3e-05 Identities = 28/118 (23%), Positives = 58/118 (49%) Frame = +1 Query: 277 PMMPVRVLLAEGDDSTRHVISALLRKCGYHVSAASDGVKAWELLKEKSFKIDLVLTEVEL 456 P +P +V++ + D + LL+ G+ V+ +D + W +L+ + D ++ +V + Sbjct: 522 PEIPNKVMILDDDQDWLRTLPTLLKPWGFKVTTLADPQQFWTVLQ--AVTPDALVLDVNM 579 Query: 457 PSMSGFLLLSTIMEHDACKNIPVIMMSSNDAVSMVFKCMLKGAADFLVKPIRKNELRN 630 P ++GF L + + +PV+ +S + + G D+L KP++ EL N Sbjct: 580 PQINGFELCQLLRSDPHWQRLPVLFLSVLTDPTTQNQAFAVGGDDYLCKPVKGVELAN 637 Score = 49.7 bits (117), Expect = 6e-05 Identities = 29/112 (25%), Positives = 55/112 (49%) Frame = +1 Query: 289 VRVLLAEGDDSTRHVISALLRKCGYHVSAASDGVKAWELLKEKSFKIDLVLTEVELPSMS 468 +++LL E DD V++ L Y V DG W +F+ DL++ ++ LP++ Sbjct: 1 MKILLVEDDDVLIKVLTKNLTTHHYIVDVVKDGEMGWTY--GSTFEYDLIILDIMLPNLD 58 Query: 469 GFLLLSTIMEHDACKNIPVIMMSSNDAVSMVFKCMLKGAADFLVKPIRKNEL 624 G L +P++++++ D ++ + + GA D++VKP EL Sbjct: 59 GISLCKRFRAQGY--TVPILLLTAQDNITAKVQGLDAGADDYVVKPFDPIEL 108
>P43501:PILH_PSEAE Protein pilH - Pseudomonas aeruginosa| Length = 121 Score = 50.4 bits (119), Expect = 3e-05 Identities = 29/111 (26%), Positives = 59/111 (53%) Frame = +1 Query: 292 RVLLAEGDDSTRHVISALLRKCGYHVSAASDGVKAWELLKEKSFKIDLVLTEVELPSMSG 471 R+L+ + + + ++A+L K G+ V A +G L +++ K D+VL ++ +P ++G Sbjct: 3 RILIVDDSPTEMYKLTAMLEKHGHQVLKAENGGDGVALARQE--KPDVVLMDIVMPGLNG 60 Query: 472 FLLLSTIMEHDACKNIPVIMMSSNDAVSMVFKCMLKGAADFLVKPIRKNEL 624 F + + IPVI++++ D + +GA D+L KP+ + L Sbjct: 61 FQATRQLTKDAETSAIPVIIVTTKDQETDKVWGKRQGARDYLTKPVDEETL 111
>P0AE69:CHEY_SHIFL Chemotaxis protein cheY - Shigella flexneri| Length = 129 Score = 50.4 bits (119), Expect = 3e-05 Identities = 31/123 (25%), Positives = 60/123 (48%), Gaps = 1/123 (0%) Frame = +1 Query: 289 VRVLLAEGDDSTRHVISALLRKCGYH-VSAASDGVKAWELLKEKSFKIDLVLTEVELPSM 465 ++ L+ + + R ++ LL++ G++ V A DGV A L+ + V+++ +P+M Sbjct: 6 LKFLVVDDFSTMRRIVRNLLKELGFNNVEEAEDGVDALNKLQAGGY--GFVISDWNMPNM 63 Query: 466 SGFLLLSTIMEHDACKNIPVIMMSSNDAVSMVFKCMLKGAADFLVKPIRKNELRNLWQHV 645 G LL TI A +PV+M+++ + GA+ ++VKP L + Sbjct: 64 DGLELLKTIRADGAMSALPVLMVTAEAKKENIIAAAQAGASGYVVKPFTAATLEEKLNKI 123 Query: 646 WRK 654 + K Sbjct: 124 FEK 126
>P0AE67:CHEY_ECOLI Chemotaxis protein cheY - Escherichia coli| Length = 129 Score = 50.4 bits (119), Expect = 3e-05 Identities = 31/123 (25%), Positives = 60/123 (48%), Gaps = 1/123 (0%) Frame = +1 Query: 289 VRVLLAEGDDSTRHVISALLRKCGYH-VSAASDGVKAWELLKEKSFKIDLVLTEVELPSM 465 ++ L+ + + R ++ LL++ G++ V A DGV A L+ + V+++ +P+M Sbjct: 6 LKFLVVDDFSTMRRIVRNLLKELGFNNVEEAEDGVDALNKLQAGGY--GFVISDWNMPNM 63 Query: 466 SGFLLLSTIMEHDACKNIPVIMMSSNDAVSMVFKCMLKGAADFLVKPIRKNELRNLWQHV 645 G LL TI A +PV+M+++ + GA+ ++VKP L + Sbjct: 64 DGLELLKTIRADGAMSALPVLMVTAEAKKENIIAAAQAGASGYVVKPFTAATLEEKLNKI 123 Query: 646 WRK 654 + K Sbjct: 124 FEK 126
>P0AE68:CHEY_ECO57 Chemotaxis protein cheY - Escherichia coli O157:H7| Length = 129 Score = 50.4 bits (119), Expect = 3e-05 Identities = 31/123 (25%), Positives = 60/123 (48%), Gaps = 1/123 (0%) Frame = +1 Query: 289 VRVLLAEGDDSTRHVISALLRKCGYH-VSAASDGVKAWELLKEKSFKIDLVLTEVELPSM 465 ++ L+ + + R ++ LL++ G++ V A DGV A L+ + V+++ +P+M Sbjct: 6 LKFLVVDDFSTMRRIVRNLLKELGFNNVEEAEDGVDALNKLQAGGY--GFVISDWNMPNM 63 Query: 466 SGFLLLSTIMEHDACKNIPVIMMSSNDAVSMVFKCMLKGAADFLVKPIRKNELRNLWQHV 645 G LL TI A +PV+M+++ + GA+ ++VKP L + Sbjct: 64 DGLELLKTIRADGAMSALPVLMVTAEAKKENIIAAAQAGASGYVVKPFTAATLEEKLNKI 123 Query: 646 WRK 654 + K Sbjct: 124 FEK 126
>P37478:YYCF_BACSU Transcriptional regulatory protein yycF - Bacillus subtilis| Length = 235 Score = 50.1 bits (118), Expect = 4e-05 Identities = 35/142 (24%), Positives = 70/142 (49%) Frame = +1 Query: 283 MPVRVLLAEGDDSTRHVISALLRKCGYHVSAASDGVKAWELLKEKSFKIDLVLTEVELPS 462 M ++L+ + + ++ LRK GY V A DG +A E+++E + DL+L ++ LP+ Sbjct: 1 MDKKILVVDDEKPIADILEFNLRKEGYEVHCAHDGNEAVEMVEE--LQPDLILLDIMLPN 58 Query: 463 MSGFLLLSTIMEHDACKNIPVIMMSSNDAVSMVFKCMLKGAADFLVKPIRKNELRNLWQH 642 G + + + ++P+IM+++ D+ + GA D++ KP EL + Sbjct: 59 KDGVEVCREVRKK---YDMPIIMLTAKDSEIDKVIGLEIGADDYVTKPFSTRELLARVKA 115 Query: 643 VWRKQLANGEIDVQQIQQEENV 708 R+QL + + E ++ Sbjct: 116 NLRRQLTTAPAEEEPSSNEIHI 137
>P0A4I0:DLTR_STRA5 Transcriptional regulatory protein dltR - Streptococcus agalactiae| serotype V Length = 224 Score = 50.1 bits (118), Expect = 4e-05 Identities = 35/112 (31%), Positives = 53/112 (47%) Frame = +1 Query: 289 VRVLLAEGDDSTRHVISALLRKCGYHVSAASDGVKAWELLKEKSFKIDLVLTEVELPSMS 468 +R+L+ E + S I ALL GY V A DG E + + DLVL ++ LP S Sbjct: 1 MRLLVVEDEKSIAEAIQALLADKGYSVDLAFDGDDGLEYILTGLY--DLVLLDIMLPKRS 58 Query: 469 GFLLLSTIMEHDACKNIPVIMMSSNDAVSMVFKCMLKGAADFLVKPIRKNEL 624 G +L + E A P+I +++ + GA D++ KP +EL Sbjct: 59 GLSVLKRVRE--AGLETPIIFLTAKSQTYDKVNGLDLGADDYITKPFEADEL 108
>P0A4H9:DLTR_STRA3 Transcriptional regulatory protein dltR - Streptococcus agalactiae| serotype III Length = 224 Score = 50.1 bits (118), Expect = 4e-05 Identities = 35/112 (31%), Positives = 53/112 (47%) Frame = +1 Query: 289 VRVLLAEGDDSTRHVISALLRKCGYHVSAASDGVKAWELLKEKSFKIDLVLTEVELPSMS 468 +R+L+ E + S I ALL GY V A DG E + + DLVL ++ LP S Sbjct: 1 MRLLVVEDEKSIAEAIQALLADKGYSVDLAFDGDDGLEYILTGLY--DLVLLDIMLPKRS 58 Query: 469 GFLLLSTIMEHDACKNIPVIMMSSNDAVSMVFKCMLKGAADFLVKPIRKNEL 624 G +L + E A P+I +++ + GA D++ KP +EL Sbjct: 59 GLSVLKRVRE--AGLETPIIFLTAKSQTYDKVNGLDLGADDYITKPFEADEL 108
>Q02540:COPR_PSESM Transcriptional activator protein copR - Pseudomonas syringae pv.| tomato Length = 227 Score = 50.1 bits (118), Expect = 4e-05 Identities = 39/173 (22%), Positives = 86/173 (49%), Gaps = 8/173 (4%) Frame = +1 Query: 289 VRVLLAEGDDSTRHVISALLRKCGYHVSAASDGVKAWELLKEKSFKIDLVLTEVELPSMS 468 +++L+AE + T + LR+ G++V G A + +++ DL++ +V +P + Sbjct: 1 MKLLVAEDEPKTGIYLQQGLREAGFNVDRVVTGTDAVDQALNEAY--DLLILDVMMPGLD 58 Query: 469 GFLLLSTIMEHDACKNIPVIMMSSNDAVSMVFKCMLKGAADFLVKPIRKNELRNLWQHVW 648 G+ ++ + A + +PV+ +++ D V K + GA D+LVKP +EL + + Sbjct: 59 GWEVIRRL--RTAGQPVPVLFLTARDGVDDRVKGLELGADDYLVKPFALSELLARVRTLL 116 Query: 649 RK--------QLANGEIDVQQIQQEENVAEQHGRKTEATKAEHSTQNVVRKNR 783 R+ L G++ V +++ A + G++ E T E + ++ + + Sbjct: 117 RRGSSLQVQTSLQIGDLQVDLLKRR---ATRGGKRIELTAKEFALLELLMRRQ 166
>O50055:COL1_ARATH Zinc finger protein CONSTANS-LIKE 1 - Arabidopsis thaliana (Mouse-ear| cress) Length = 355 Score = 50.1 bits (118), Expect = 4e-05 Identities = 26/59 (44%), Positives = 37/59 (62%), Gaps = 2/59 (3%) Frame = +1 Query: 1801 TENPSMEGLHHLS--QREIALNKFRLKRKERCFEKKVRYQSRKLLAEQRPRVKGQFVRQ 1971 T+ P LS RE + ++R K+K R FEK +RY SRK AE+RPR+KG+F ++ Sbjct: 270 TDQPPYPPAQMLSPRDREARVLRYREKKKMRKFEKTIRYASRKAYAEKRPRIKGRFAKK 328
>Q9ZVD3:ARR13_ARATH Putative two-component response regulator ARR13 - Arabidopsis| thaliana (Mouse-ear cress) Length = 572 Score = 50.1 bits (118), Expect = 4e-05 Identities = 49/219 (22%), Positives = 92/219 (42%), Gaps = 28/219 (12%) Frame = +1 Query: 280 MMPVRVLLAEGDDSTRHVISALLRKCGYH---VSAASDGVKAWELLKEKSFKIDLVLTEV 450 ++ + V++ + + + S +L K Y V A KA LK + IDL++T+ Sbjct: 13 VLKINVMVVDDNRVFLDIWSRMLEKSKYREITVIAVDYPKKALSTLKNQRDNIDLIITDY 72 Query: 451 ELPSMSGFLLLSTIMEHDACKNIPVIMMSSNDAVSMVFKCMLKGAADFLVKPIRKNELRN 630 +P M+G L I + N+ V++MSS+ + + + GA F+ KPI +L Sbjct: 73 YMPGMNGLQLKKQITQEFG--NLSVLVMSSDP--NKEEESLSCGAMGFIPKPIAPTDLPK 128 Query: 631 LWQH-VWRKQLANGEIDVQQIQQEENV------------------------AEQHGRKTE 735 ++Q + K+ + +Q Q++ NV ++ R Sbjct: 129 IYQFALTYKRNGKSTLSTEQNQKDANVSVPQQIMLVPEQAYVLKTKKKNCSSKSDTRTVN 188 Query: 736 ATKAEHSTQNVVRKNRECSEQESDAQSSCTRSEPEAESK 852 +T H + N RKNR+ + + + S+P + K Sbjct: 189 STNVSHVSTNGSRKNRKRKPKGGPSDDGESLSQPPKKKK 227
>P0AFU4:YFHA_ECOLI Uncharacterized protein yfhA - Escherichia coli| Length = 444 Score = 49.3 bits (116), Expect = 8e-05 Identities = 29/113 (25%), Positives = 55/113 (48%) Frame = +1 Query: 286 PVRVLLAEGDDSTRHVISALLRKCGYHVSAASDGVKAWELLKEKSFKIDLVLTEVELPSM 465 P +LL + D ++ L GY V A G + +L + K+DLV++++ + M Sbjct: 5 PAHLLLVDDDPGLLKLLGLRLTSEGYSVVTAESGAEGLRVLNRE--KVDLVISDLRMDEM 62 Query: 466 SGFLLLSTIMEHDACKNIPVIMMSSNDAVSMVFKCMLKGAADFLVKPIRKNEL 624 G L + I + +PVI+++++ ++ +G FL KP+ K+ L Sbjct: 63 DGMQLFAEIQKVQP--GMPVIILTAHGSIPDAVAATQQGVFSFLTKPVDKDAL 113
>P0AFU5:YFHA_ECO57 Uncharacterized protein yfhA - Escherichia coli O157:H7| Length = 444 Score = 49.3 bits (116), Expect = 8e-05 Identities = 29/113 (25%), Positives = 55/113 (48%) Frame = +1 Query: 286 PVRVLLAEGDDSTRHVISALLRKCGYHVSAASDGVKAWELLKEKSFKIDLVLTEVELPSM 465 P +LL + D ++ L GY V A G + +L + K+DLV++++ + M Sbjct: 5 PAHLLLVDDDPGLLKLLGLRLTSEGYSVVTAESGAEGLRVLNRE--KVDLVISDLRMDEM 62 Query: 466 SGFLLLSTIMEHDACKNIPVIMMSSNDAVSMVFKCMLKGAADFLVKPIRKNEL 624 G L + I + +PVI+++++ ++ +G FL KP+ K+ L Sbjct: 63 DGMQLFAEIQKVQP--GMPVIILTAHGSIPDAVAATQQGVFSFLTKPVDKDAL 113
>P14376:RCSC_ECOLI Sensor kinase protein rcsC - Escherichia coli| Length = 949 Score = 49.3 bits (116), Expect = 8e-05 Identities = 30/105 (28%), Positives = 53/105 (50%) Frame = +1 Query: 295 VLLAEGDDSTRHVISALLRKCGYHVSAASDGVKAWELLKEKSFKIDLVLTEVELPSMSGF 474 +L+ + R +++ L GY A+DGV A +L + ID+VL++V +P+M G+ Sbjct: 827 ILVVDDHPINRRLLADQLGSLGYQCKTANDGVDALNVLSKNH--IDIVLSDVNMPNMDGY 884 Query: 475 LLLSTIMEHDACKNIPVIMMSSNDAVSMVFKCMLKGAADFLVKPI 609 L I + +PVI +++N +C+ G L KP+ Sbjct: 885 RLTQRIRQLGL--TLPVIGVTANALAEEKQRCLESGMDSCLSKPV 927
>Q9FAD7:CHEY_ENTCL Chemotaxis protein cheY - Enterobacter cloacae| Length = 129 Score = 49.3 bits (116), Expect = 8e-05 Identities = 31/123 (25%), Positives = 60/123 (48%), Gaps = 1/123 (0%) Frame = +1 Query: 289 VRVLLAEGDDSTRHVISALLRKCGYH-VSAASDGVKAWELLKEKSFKIDLVLTEVELPSM 465 ++ L+ + + R ++ LL++ G++ V A DGV A L+ F V+++ +P+M Sbjct: 6 LKFLVVDDFSTMRRIVRNLLKELGFNNVEEAEDGVDALNKLQAGGF--GFVISDWNMPNM 63 Query: 466 SGFLLLSTIMEHDACKNIPVIMMSSNDAVSMVFKCMLKGAADFLVKPIRKNELRNLWQHV 645 G LL TI ++PV+M+++ + GA+ ++VKP L + Sbjct: 64 DGLELLKTIRADAGMASMPVLMVTAEAKKENIIAAAQAGASGYVVKPFTAATLEEKLGKI 123 Query: 646 WRK 654 + K Sbjct: 124 FEK 126
>Q8FGP6:CHEY_ECOL6 Chemotaxis protein cheY - Escherichia coli O6| Length = 129 Score = 49.3 bits (116), Expect = 8e-05 Identities = 30/123 (24%), Positives = 60/123 (48%), Gaps = 1/123 (0%) Frame = +1 Query: 289 VRVLLAEGDDSTRHVISALLRKCGYH-VSAASDGVKAWELLKEKSFKIDLVLTEVELPSM 465 ++ L+ + + R ++ LL++ G++ V A DG+ A L+ + V+++ +P+M Sbjct: 6 LKFLVVDDFSTMRRIVRNLLKELGFNNVEEAEDGLDALNKLQAGGY--GFVISDWNMPNM 63 Query: 466 SGFLLLSTIMEHDACKNIPVIMMSSNDAVSMVFKCMLKGAADFLVKPIRKNELRNLWQHV 645 G LL TI A +PV+M+++ + GA+ ++VKP L + Sbjct: 64 DGLELLKTIRADGAMSALPVLMVTAEAKKENIIAAAQAGASGYVVKPFTAATLEEKLNKI 123 Query: 646 WRK 654 + K Sbjct: 124 FEK 126
>P0C001:ARLR_STAAW Response regulator arlR - Staphylococcus aureus (strain MW2)| Length = 219 Score = 49.3 bits (116), Expect = 8e-05 Identities = 42/197 (21%), Positives = 86/197 (43%), Gaps = 2/197 (1%) Frame = +1 Query: 292 RVLLAEGDDSTRHVISALLRKCGYHVSAASDGVKAWELLKEKSFKIDLVLTEVELPSMSG 471 ++L+ E + + + L Y+V DG + K S DL++ ++ LPS++G Sbjct: 3 QILIVEDEQNLARFLELELTHENYNVDTEYDGQDGLD--KALSHYYDLIILDLMLPSING 60 Query: 472 FLLLSTIMEHDACKNIPVIMMSSNDAVSMVFKCMLKGAADFLVKPIRKNELRNLWQHVWR 651 + I + ++ P+I++++ + GA D++VKP EL + + R Sbjct: 61 LEICRKIRQQ---QSTPIIIITAKSDTYDKVAGLDYGADDYIVKPFDIEELLARIRAILR 117 Query: 652 KQLANGEIDVQQIQQEENV--AEQHGRKTEATKAEHSTQNVVRKNRECSEQESDAQSSCT 825 +Q IDV I ++N +G + E TK E+ ++ +N+ Q + Sbjct: 118 RQPQKDIIDVNGITIDKNAFKVTVNGAEIELTKTEYDLLYLLAENKNHVMQREQILNHVW 177 Query: 826 RSEPEAESKHTNSFLEF 876 E E+ + ++ + Sbjct: 178 GYNSEVETNVVDVYIRY 194
>Q6G9E6:ARLR_STAAS Response regulator arlR - Staphylococcus aureus (strain MSSA476)| Length = 219 Score = 49.3 bits (116), Expect = 8e-05 Identities = 42/197 (21%), Positives = 86/197 (43%), Gaps = 2/197 (1%) Frame = +1 Query: 292 RVLLAEGDDSTRHVISALLRKCGYHVSAASDGVKAWELLKEKSFKIDLVLTEVELPSMSG 471 ++L+ E + + + L Y+V DG + K S DL++ ++ LPS++G Sbjct: 3 QILIVEDEQNLARFLELELTHENYNVDTEYDGQDGLD--KALSHYYDLIILDLMLPSING 60 Query: 472 FLLLSTIMEHDACKNIPVIMMSSNDAVSMVFKCMLKGAADFLVKPIRKNELRNLWQHVWR 651 + I + ++ P+I++++ + GA D++VKP EL + + R Sbjct: 61 LEICRKIRQQ---QSTPIIIITAKSDTYDKVAGLDYGADDYIVKPFDIEELLARIRAILR 117 Query: 652 KQLANGEIDVQQIQQEENV--AEQHGRKTEATKAEHSTQNVVRKNRECSEQESDAQSSCT 825 +Q IDV I ++N +G + E TK E+ ++ +N+ Q + Sbjct: 118 RQPQKDIIDVNGITIDKNAFKVTVNGAEIELTKTEYDLLYLLAENKNHVMQREQILNHVW 177 Query: 826 RSEPEAESKHTNSFLEF 876 E E+ + ++ + Sbjct: 178 GYNSEVETNVVDVYIRY 194
>Q6GGZ3:ARLR_STAAR Response regulator arlR - Staphylococcus aureus (strain MRSA252)| Length = 219 Score = 49.3 bits (116), Expect = 8e-05 Identities = 42/197 (21%), Positives = 86/197 (43%), Gaps = 2/197 (1%) Frame = +1 Query: 292 RVLLAEGDDSTRHVISALLRKCGYHVSAASDGVKAWELLKEKSFKIDLVLTEVELPSMSG 471 ++L+ E + + + L Y+V DG + K S DL++ ++ LPS++G Sbjct: 3 QILIVEDEQNLARFLELELTHENYNVDTEYDGQDGLD--KALSHYYDLIILDLMLPSING 60 Query: 472 FLLLSTIMEHDACKNIPVIMMSSNDAVSMVFKCMLKGAADFLVKPIRKNELRNLWQHVWR 651 + I + ++ P+I++++ + GA D++VKP EL + + R Sbjct: 61 LEICRKIRQQ---QSTPIIIITAKSDTYDKVAGLDYGADDYIVKPFDIEELLARIRAILR 117 Query: 652 KQLANGEIDVQQIQQEENV--AEQHGRKTEATKAEHSTQNVVRKNRECSEQESDAQSSCT 825 +Q IDV I ++N +G + E TK E+ ++ +N+ Q + Sbjct: 118 RQPQKDIIDVNGITIDKNAFKVTVNGAEIELTKTEYDLLYLLAENKNHVMQREQILNHVW 177 Query: 826 RSEPEAESKHTNSFLEF 876 E E+ + ++ + Sbjct: 178 GYNSEVETNVVDVYIRY 194
>P0C000:ARLR_STAAM Response regulator arlR - Staphylococcus aureus (strain Mu50 / ATCC| 700699) Length = 219 Score = 49.3 bits (116), Expect = 8e-05 Identities = 42/197 (21%), Positives = 86/197 (43%), Gaps = 2/197 (1%) Frame = +1 Query: 292 RVLLAEGDDSTRHVISALLRKCGYHVSAASDGVKAWELLKEKSFKIDLVLTEVELPSMSG 471 ++L+ E + + + L Y+V DG + K S DL++ ++ LPS++G Sbjct: 3 QILIVEDEQNLARFLELELTHENYNVDTEYDGQDGLD--KALSHYYDLIILDLMLPSING 60 Query: 472 FLLLSTIMEHDACKNIPVIMMSSNDAVSMVFKCMLKGAADFLVKPIRKNELRNLWQHVWR 651 + I + ++ P+I++++ + GA D++VKP EL + + R Sbjct: 61 LEICRKIRQQ---QSTPIIIITAKSDTYDKVAGLDYGADDYIVKPFDIEELLARIRAILR 117 Query: 652 KQLANGEIDVQQIQQEENV--AEQHGRKTEATKAEHSTQNVVRKNRECSEQESDAQSSCT 825 +Q IDV I ++N +G + E TK E+ ++ +N+ Q + Sbjct: 118 RQPQKDIIDVNGITIDKNAFKVTVNGAEIELTKTEYDLLYLLAENKNHVMQREQILNHVW 177 Query: 826 RSEPEAESKHTNSFLEF 876 E E+ + ++ + Sbjct: 178 GYNSEVETNVVDVYIRY 194
>Q5HG04:ARLR_STAAC Response regulator arlR - Staphylococcus aureus (strain COL)| Length = 219 Score = 49.3 bits (116), Expect = 8e-05 Identities = 42/197 (21%), Positives = 86/197 (43%), Gaps = 2/197 (1%) Frame = +1 Query: 292 RVLLAEGDDSTRHVISALLRKCGYHVSAASDGVKAWELLKEKSFKIDLVLTEVELPSMSG 471 ++L+ E + + + L Y+V DG + K S DL++ ++ LPS++G Sbjct: 3 QILIVEDEQNLARFLELELTHENYNVDTEYDGQDGLD--KALSHYYDLIILDLMLPSING 60 Query: 472 FLLLSTIMEHDACKNIPVIMMSSNDAVSMVFKCMLKGAADFLVKPIRKNELRNLWQHVWR 651 + I + ++ P+I++++ + GA D++VKP EL + + R Sbjct: 61 LEICRKIRQQ---QSTPIIIITAKSDTYDKVAGLDYGADDYIVKPFDIEELLARIRAILR 117 Query: 652 KQLANGEIDVQQIQQEENV--AEQHGRKTEATKAEHSTQNVVRKNRECSEQESDAQSSCT 825 +Q IDV I ++N +G + E TK E+ ++ +N+ Q + Sbjct: 118 RQPQKDIIDVNGITIDKNAFKVTVNGAEIELTKTEYDLLYLLAENKNHVMQREQILNHVW 177 Query: 826 RSEPEAESKHTNSFLEF 876 E E+ + ++ + Sbjct: 178 GYNSEVETNVVDVYIRY 194
>Q2YY03:ARLR_STAAB Response regulator arlR - Staphylococcus aureus (strain bovine| RF122) Length = 219 Score = 49.3 bits (116), Expect = 8e-05 Identities = 42/197 (21%), Positives = 86/197 (43%), Gaps = 2/197 (1%) Frame = +1 Query: 292 RVLLAEGDDSTRHVISALLRKCGYHVSAASDGVKAWELLKEKSFKIDLVLTEVELPSMSG 471 ++L+ E + + + L Y+V DG + K S DL++ ++ LPS++G Sbjct: 3 QILIVEDEQNLARFLELELTHENYNVDTEYDGQDGLD--KALSHYYDLIILDLMLPSING 60 Query: 472 FLLLSTIMEHDACKNIPVIMMSSNDAVSMVFKCMLKGAADFLVKPIRKNELRNLWQHVWR 651 + I + ++ P+I++++ + GA D++VKP EL + + R Sbjct: 61 LEICRKIRQQ---QSTPIIIITAKSDTYDKVAGLDYGADDYIVKPFDIEELLARIRAILR 117 Query: 652 KQLANGEIDVQQIQQEENV--AEQHGRKTEATKAEHSTQNVVRKNRECSEQESDAQSSCT 825 +Q IDV I ++N +G + E TK E+ ++ +N+ Q + Sbjct: 118 RQPQKDIIDVNGITIDKNAFKVTVNGAEIELTKTEYDLLYLLAENKNHVMQREQILNHVW 177 Query: 826 RSEPEAESKHTNSFLEF 876 E E+ + ++ + Sbjct: 178 GYNSEVETNVVDVYIRY 194
>Q9KJN4:ARLR_STAA8 Response regulator arlR - Staphylococcus aureus (strain NCTC 8325)| Length = 219 Score = 49.3 bits (116), Expect = 8e-05 Identities = 42/197 (21%), Positives = 86/197 (43%), Gaps = 2/197 (1%) Frame = +1 Query: 292 RVLLAEGDDSTRHVISALLRKCGYHVSAASDGVKAWELLKEKSFKIDLVLTEVELPSMSG 471 ++L+ E + + + L Y+V DG + K S DL++ ++ LPS++G Sbjct: 3 QILIVEDEQNLARFLELELTHENYNVDTEYDGQDGLD--KALSHYYDLIILDLMLPSING 60 Query: 472 FLLLSTIMEHDACKNIPVIMMSSNDAVSMVFKCMLKGAADFLVKPIRKNELRNLWQHVWR 651 + I + ++ P+I++++ + GA D++VKP EL + + R Sbjct: 61 LEICRKIRQQ---QSTPIIIITAKSDTYDKVAGLDYGADDYIVKPFDIEELLARIRAILR 117 Query: 652 KQLANGEIDVQQIQQEENV--AEQHGRKTEATKAEHSTQNVVRKNRECSEQESDAQSSCT 825 +Q IDV I ++N +G + E TK E+ ++ +N+ Q + Sbjct: 118 RQPQKDIIDVNGITIDKNAFKVTVNGAEIELTKTEYDLLYLLAENKNHVMQREQILNHVW 177 Query: 826 RSEPEAESKHTNSFLEF 876 E E+ + ++ + Sbjct: 178 GYNSEVETNVVDVYIRY 194
>Q2FH23:ARLR_STAA3 Response regulator arlR - Staphylococcus aureus (strain USA300)| Length = 219 Score = 49.3 bits (116), Expect = 8e-05 Identities = 42/197 (21%), Positives = 86/197 (43%), Gaps = 2/197 (1%) Frame = +1 Query: 292 RVLLAEGDDSTRHVISALLRKCGYHVSAASDGVKAWELLKEKSFKIDLVLTEVELPSMSG 471 ++L+ E + + + L Y+V DG + K S DL++ ++ LPS++G Sbjct: 3 QILIVEDEQNLARFLELELTHENYNVDTEYDGQDGLD--KALSHYYDLIILDLMLPSING 60 Query: 472 FLLLSTIMEHDACKNIPVIMMSSNDAVSMVFKCMLKGAADFLVKPIRKNELRNLWQHVWR 651 + I + ++ P+I++++ + GA D++VKP EL + + R Sbjct: 61 LEICRKIRQQ---QSTPIIIITAKSDTYDKVAGLDYGADDYIVKPFDIEELLARIRAILR 117 Query: 652 KQLANGEIDVQQIQQEENV--AEQHGRKTEATKAEHSTQNVVRKNRECSEQESDAQSSCT 825 +Q IDV I ++N +G + E TK E+ ++ +N+ Q + Sbjct: 118 RQPQKDIIDVNGITIDKNAFKVTVNGAEIELTKTEYDLLYLLAENKNHVMQREQILNHVW 177 Query: 826 RSEPEAESKHTNSFLEF 876 E E+ + ++ + Sbjct: 178 GYNSEVETNVVDVYIRY 194
>P0AFB8:NTRC_ECOLI Nitrogen regulation protein NR(I) - Escherichia coli| Length = 469 Score = 48.9 bits (115), Expect = 1e-04 Identities = 40/160 (25%), Positives = 69/160 (43%) Frame = +1 Query: 295 VLLAEGDDSTRHVISALLRKCGYHVSAASDGVKAWELLKEKSFKIDLVLTEVELPSMSGF 474 V + + D S R V+ L G + +G + E L K+ D++L+++ +P M G Sbjct: 6 VWVVDDDSSIRWVLERALAGAGLTCTTFENGAEVLEALASKT--PDVLLSDIRMPGMDGL 63 Query: 475 LLLSTIMEHDACKNIPVIMMSSNDAVSMVFKCMLKGAADFLVKPIRKNELRNLWQHVWRK 654 LL I + +PVI+M+++ + +GA D+L KP +E Sbjct: 64 ALLKQIKQRHPM--LPVIIMTAHSDLDAAVSAYQQGAFDYLPKPFDIDE---------AV 112 Query: 655 QLANGEIDVQQIQQEENVAEQHGRKTEATKAEHSTQNVVR 774 L I Q QQ+ + +G T+ + Q+V R Sbjct: 113 ALVERAISHYQEQQQPRNVQLNGPTTDIIGEAPAMQDVFR 152
>P0AFB9:NTRC_ECO57 Nitrogen regulation protein NR(I) - Escherichia coli O157:H7| Length = 469 Score = 48.9 bits (115), Expect = 1e-04 Identities = 40/160 (25%), Positives = 69/160 (43%) Frame = +1 Query: 295 VLLAEGDDSTRHVISALLRKCGYHVSAASDGVKAWELLKEKSFKIDLVLTEVELPSMSGF 474 V + + D S R V+ L G + +G + E L K+ D++L+++ +P M G Sbjct: 6 VWVVDDDSSIRWVLERALAGAGLTCTTFENGAEVLEALASKT--PDVLLSDIRMPGMDGL 63 Query: 475 LLLSTIMEHDACKNIPVIMMSSNDAVSMVFKCMLKGAADFLVKPIRKNELRNLWQHVWRK 654 LL I + +PVI+M+++ + +GA D+L KP +E Sbjct: 64 ALLKQIKQRHPM--LPVIIMTAHSDLDAAVSAYQQGAFDYLPKPFDIDE---------AV 112 Query: 655 QLANGEIDVQQIQQEENVAEQHGRKTEATKAEHSTQNVVR 774 L I Q QQ+ + +G T+ + Q+V R Sbjct: 113 ALVERAISHYQEQQQPRNVQLNGPTTDIIGEAPAMQDVFR 152
>Q9P7Q7:MAK1_SCHPO Peroxide stress-activated histidine kinase mak1 - Schizosaccharomyces| pombe (Fission yeast) Length = 1639 Score = 48.9 bits (115), Expect = 1e-04 Identities = 36/115 (31%), Positives = 56/115 (48%), Gaps = 5/115 (4%) Frame = +1 Query: 295 VLLAEGDDSTRHVISALLRKCGYHVSAASDGVKAWELLK-EKSFKIDLVLTEVELPSMSG 471 VLLAE + VIS L + G DG++ E K EK L+L ++++P M G Sbjct: 1508 VLLAEDNIINIKVISRYLERIGVKFKVTMDGLQCVEEWKREKPNFYSLILMDLQMPVMDG 1567 Query: 472 FLLLSTI----MEHDACKNIPVIMMSSNDAVSMVFKCMLKGAADFLVKPIRKNEL 624 + + I +E+D K +P++ +S+N +V C G +L KPI L Sbjct: 1568 YQACNEIRKYELENDYPK-VPIVALSANALPHVVLSCKDSGFDSYLAKPITLQHL 1621
>Q9KLK7:LUXQ_VIBCH Autoinducer 2 sensor kinase/phosphatase luxQ - Vibrio cholerae| Length = 857 Score = 48.9 bits (115), Expect = 1e-04 Identities = 36/120 (30%), Positives = 62/120 (51%), Gaps = 2/120 (1%) Frame = +1 Query: 289 VRVLLAEGDDSTRHVISALLRKCGYHVSAASDGVKAWELLKEKSFKIDLVLTEVELPSMS 468 +RVLL E + + + A RK G VS +DG++A E LK + DLVL + +LP + Sbjct: 730 LRVLLVEDNHTNAFIAQAFCRKYGLDVSWVTDGLQAIEELKIHDY--DLVLMDNQLPYLD 787 Query: 469 GFLLLSTIMEHDACKNIPVIMMS-SNDAVSMVFKCMLKGAADF-LVKPIRKNELRNLWQH 642 G TI + ++PV++ + + D + + A++ LVKP+++ L +H Sbjct: 788 GVETTRTIKK---VLHLPVVVYACTADGLEETRQAFFHAGAEYVLVKPLKEQTLHKALEH 844
>Q44929:GTCR_ANEMI Response regulator gtcR - Aneurinibacillus migulanus| Length = 242 Score = 48.9 bits (115), Expect = 1e-04 Identities = 28/113 (24%), Positives = 56/113 (49%) Frame = +1 Query: 283 MPVRVLLAEGDDSTRHVISALLRKCGYHVSAASDGVKAWELLKEKSFKIDLVLTEVELPS 462 M +L+A+ + ++ L + Y + A DG +AW +++ +DL + ++ +P+ Sbjct: 1 MSKTILIADDEPEIIELLKLFLERESYRIIEAYDGEQAWNYIRQHP--VDLAIIDIMMPA 58 Query: 463 MSGFLLLSTIMEHDACKNIPVIMMSSNDAVSMVFKCMLKGAADFLVKPIRKNE 621 + GF L+ + +PVI++S+ + S + GA DF+ KP E Sbjct: 59 LDGFQLIKRLTNE---YKLPVIILSAKNRDSDKILGLGLGADDFISKPFNPLE 108
>P10046:DCTD_RHILE C4-dicarboxylate transport transcriptional regulatory protein dctD| - Rhizobium leguminosarum Length = 448 Score = 48.9 bits (115), Expect = 1e-04 Identities = 34/115 (29%), Positives = 58/115 (50%) Frame = +1 Query: 280 MMPVRVLLAEGDDSTRHVISALLRKCGYHVSAASDGVKAWELLKEKSFKIDLVLTEVELP 459 +MPV ++ + D R + L G+ VSA DG KA L + V+T++ +P Sbjct: 4 LMPVALI--DDDKDLRRATAQTLELAGFSVSAY-DGAKA-ALADLPADFAGPVVTDIRMP 59 Query: 460 SMSGFLLLSTIMEHDACKNIPVIMMSSNDAVSMVFKCMLKGAADFLVKPIRKNEL 624 + G L +T+ D ++PVI+M+ + + M + + GA DF+ KP + L Sbjct: 60 EIDGLQLFATLQGMDV--DLPVILMTGHGDIPMAVQAIQDGAYDFIAKPFAADRL 112
>Q39057:CONS_ARATH Zinc finger protein CONSTANS - Arabidopsis thaliana (Mouse-ear cress)| Length = 373 Score = 48.9 bits (115), Expect = 1e-04 Identities = 23/44 (52%), Positives = 31/44 (70%) Frame = +1 Query: 1843 REIALNKFRLKRKERCFEKKVRYQSRKLLAEQRPRVKGQFVRQD 1974 RE + ++R KRK R FEK +RY SRK AE RPRV G+F +++ Sbjct: 306 REARVLRYREKRKTRKFEKTIRYASRKAYAEIRPRVNGRFAKRE 349
>P44918:ARCA_HAEIN Aerobic respiration control protein arcA homolog - Haemophilus| influenzae Length = 236 Score = 48.9 bits (115), Expect = 1e-04 Identities = 32/115 (27%), Positives = 56/115 (48%) Frame = +1 Query: 280 MMPVRVLLAEGDDSTRHVISALLRKCGYHVSAASDGVKAWELLKEKSFKIDLVLTEVELP 459 M ++L+ E + TR+ + + GY V A +GV+ +L + I+LV+ ++ LP Sbjct: 1 MTTPKILVVEDEIVTRNTLKGIFEAEGYDVFEAENGVEMHHILANHN--INLVVMDINLP 58 Query: 460 SMSGFLLLSTIMEHDACKNIPVIMMSSNDAVSMVFKCMLKGAADFLVKPIRKNEL 624 +G LL + E ++P+I ++ D + GA D+L KP EL Sbjct: 59 GKNGLLLARELREE---LSLPLIFLTGRDNEVDKILGLEIGADDYLTKPFNPREL 110
>P94413:YCLJ_BACSU Uncharacterized sensory transduction protein yclJ - Bacillus| subtilis Length = 227 Score = 48.5 bits (114), Expect = 1e-04 Identities = 36/139 (25%), Positives = 66/139 (47%), Gaps = 2/139 (1%) Frame = +1 Query: 289 VRVLLAEGDDSTRHVISALLRKCGYHVSAASDGVKAWELLKEKSFKIDLVLTEVELPSMS 468 +++L+ E + S + K G+ DG++ ++ E+++ DL++ ++ LPSM Sbjct: 1 MKILMIEDNVSVCTMTEMFFFKEGFEAEFVHDGLEGYQRFTEENW--DLIILDIMLPSMD 58 Query: 469 GFLLLSTIMEHDACKNIPVIMMSSNDAVSMVFKCMLKGAADFLVKPIRKNELRNLWQHVW 648 G + I E +P+IM+++ D S GA D++ KP L + V Sbjct: 59 GVTICRKIRE---TSTVPIIMLTAKDTESDQVIGFEMGADDYVTKPFSPLTLVARIKAVI 115 Query: 649 RKQLANGE--IDVQQIQQE 699 R+ A G+ ID I+ E Sbjct: 116 RRYKATGKAVIDEDMIETE 134
>P28257:YCF27_GALSU Probable transcriptional regulator ycf27 - Galdieria sulphuraria| (Red alga) Length = 255 Score = 48.5 bits (114), Expect = 1e-04 Identities = 32/111 (28%), Positives = 58/111 (52%) Frame = +1 Query: 292 RVLLAEGDDSTRHVISALLRKCGYHVSAASDGVKAWELLKEKSFKIDLVLTEVELPSMSG 471 ++L+A+ + S R ++ L GY V A DG A L ++ +LV+ +V +P + G Sbjct: 9 KILIADDESSIRRILETRLSIIGYEVLTAPDGRSALFLFHKEH--PNLVVLDVMMPKIDG 66 Query: 472 FLLLSTIMEHDACKNIPVIMMSSNDAVSMVFKCMLKGAADFLVKPIRKNEL 624 + + I + +IP+IM+++ V+ + GA D++VKP EL Sbjct: 67 YGVCQEIRKES---DIPIIMLTALGDVTDRITGLELGADDYVVKPFSPKEL 114
>P39928:SLN1_YEAST Osmosensing histidine protein kinase SLN1 - Saccharomyces cerevisiae| (Baker's yeast) Length = 1220 Score = 48.5 bits (114), Expect = 1e-04 Identities = 30/119 (25%), Positives = 66/119 (55%), Gaps = 4/119 (3%) Frame = +1 Query: 289 VRVLLAEGDDSTRHVISALLRKCGY-HVSAASDGVKAWELLKEKSFK---IDLVLTEVEL 456 V++L+ E + + VI +L G ++ A DG +A++ +KE + K +++ +V++ Sbjct: 1088 VKILVVEDNHVNQEVIKRMLNLEGIENIELACDGQEAFDKVKELTSKGENYNMIFMDVQM 1147 Query: 457 PSMSGFLLLSTIMEHDACKNIPVIMMSSNDAVSMVFKCMLKGAADFLVKPIRKNELRNL 633 P + G LL + ++ D P++ +++ S + +C+ G FL KPI++ +L+ + Sbjct: 1148 PKVDG-LLSTKMIRRDLGYTSPIVALTAFADDSNIKECLESGMNGFLSKPIKRPKLKTI 1205
>Q9F868:REGX3_MYCS2 Sensory transduction protein regX3 - Mycobacterium smegmatis| (strain ATCC 700084 / mc(2)155) Length = 228 Score = 48.5 bits (114), Expect = 1e-04 Identities = 34/110 (30%), Positives = 56/110 (50%) Frame = +1 Query: 295 VLLAEGDDSTRHVISALLRKCGYHVSAASDGVKAWELLKEKSFKIDLVLTEVELPSMSGF 474 VL+ E ++S ++ LLRK G+ + DG A L + + D+VL ++ LP MSG Sbjct: 4 VLIVEDEESLADPLAFLLRKEGFEATVVGDGPSA--LAEFERSGADIVLLDLMLPGMSG- 60 Query: 475 LLLSTIMEHDACKNIPVIMMSSNDAVSMVFKCMLKGAADFLVKPIRKNEL 624 + A ++PVIM+++ D+ + GA D++ KP EL Sbjct: 61 --TDVCKQLRARSSVPVIMVTARDSEIDKVVGLELGADDYVTKPYSAREL 108
>Q1RJS1:NTRXL_RICBR Putative response regulator ntrX-like - Rickettsia bellii (strain| RML369-C) Length = 478 Score = 48.5 bits (114), Expect = 1e-04 Identities = 41/184 (22%), Positives = 87/184 (47%), Gaps = 6/184 (3%) Frame = +1 Query: 280 MMPVRVLLAEGDDSTRHVISALLRKCGYHVSAASDGVKAWELLKEKSFKIDLVLTEVELP 459 M + VL+ + ++ R++I+A+L+ G++ A++ +A ++L EK ++ ++ Sbjct: 1 MSLIDVLIVDDEEDIRNIIAAILKDEGFNPKVAANSTQALKILAEKPVSAVILDIWLQGS 60 Query: 460 SMSGFLLLSTIMEHDACKNIPVIMMSSNDAVSMVFKCMLKGAADFLVKPIRKNELRNLWQ 639 M G +L I + +PVI++S + + + GA D++ KP ++L L + Sbjct: 61 EMDGLGILEVIKKRYPL--MPVIIISGHGTIETAVNAIKMGAYDYIEKPFNNDKLVILLK 118 Query: 640 ---HVWRKQLANGEIDVQQIQQEENVAEQH---GRKTEATKAEHSTQNVVRKNRECSEQE 801 V + + N ++ + I + E V K E KA S+ ++ + S +E Sbjct: 119 RACEVTKLKRENIDLKSKVIDKTELVGNSTITLKYKAEIDKAASSSSRIMIHGKVGSGKE 178 Query: 802 SDAQ 813 A+ Sbjct: 179 LTAR 182
>Q7MD16:LUXQ_VIBVY Autoinducer 2 sensor kinase/phosphatase luxQ - Vibrio vulnificus| (strain YJ016) Length = 857 Score = 48.5 bits (114), Expect = 1e-04 Identities = 35/118 (29%), Positives = 57/118 (48%) Frame = +1 Query: 289 VRVLLAEGDDSTRHVISALLRKCGYHVSAASDGVKAWELLKEKSFKIDLVLTEVELPSMS 468 ++VLL E + + ++ A +K V DG +A E LKE +F DL+L + +LP M Sbjct: 734 LKVLLVEDNHTNAFILKAFCQKYQMSVEWVQDGTQALEKLKEHAF--DLILMDNQLPKMG 791 Query: 469 GFLLLSTIMEHDACKNIPVIMMSSNDAVSMVFKCMLKGAADFLVKPIRKNELRNLWQH 642 G I E P+ +++ S + + GA +VKPI++ EL + H Sbjct: 792 GIEATREIRE-TLKLGTPIYACTADAQESTKQEFLSAGANRVIVKPIKEQELHDELLH 848
>Q8D5Z6:LUXQ_VIBVU Autoinducer 2 sensor kinase/phosphatase luxQ - Vibrio vulnificus| Length = 857 Score = 48.5 bits (114), Expect = 1e-04 Identities = 35/118 (29%), Positives = 57/118 (48%) Frame = +1 Query: 289 VRVLLAEGDDSTRHVISALLRKCGYHVSAASDGVKAWELLKEKSFKIDLVLTEVELPSMS 468 ++VLL E + + ++ A +K V DG +A E LKE +F DL+L + +LP M Sbjct: 734 LKVLLVEDNHTNAFILKAFCQKYQMSVEWVQDGTQALEKLKEHAF--DLILMDNQLPKMG 791 Query: 469 GFLLLSTIMEHDACKNIPVIMMSSNDAVSMVFKCMLKGAADFLVKPIRKNELRNLWQH 642 G I E P+ +++ S + + GA +VKPI++ EL + H Sbjct: 792 GIEATREIRE-TLKLGTPIYACTADAQESTKQEFLSAGANRVIVKPIKEQELHDELLH 848
>Q96502:COL2_ARATH Zinc finger protein CONSTANS-LIKE 2 - Arabidopsis thaliana (Mouse-ear| cress) Length = 347 Score = 48.1 bits (113), Expect = 2e-04 Identities = 21/44 (47%), Positives = 32/44 (72%) Frame = +1 Query: 1840 QREIALNKFRLKRKERCFEKKVRYQSRKLLAEQRPRVKGQFVRQ 1971 +RE + ++R K+K R F+K +RY SRK AE RPR+KG+F ++ Sbjct: 277 EREARVLRYREKKKTRKFDKTIRYASRKAYAEIRPRIKGRFAKR 320
>Q11156:REGX3_MYCTU Sensory transduction protein regX3 - Mycobacterium tuberculosis| Length = 227 Score = 47.8 bits (112), Expect = 2e-04 Identities = 34/110 (30%), Positives = 56/110 (50%) Frame = +1 Query: 295 VLLAEGDDSTRHVISALLRKCGYHVSAASDGVKAWELLKEKSFKIDLVLTEVELPSMSGF 474 VL+ E ++S ++ LLRK G+ + +DG A L + D+VL ++ LP MSG Sbjct: 4 VLIVEDEESLADPLAFLLRKEGFEATVVTDGPAA--LAEFDRAGADIVLLDLMLPGMSG- 60 Query: 475 LLLSTIMEHDACKNIPVIMMSSNDAVSMVFKCMLKGAADFLVKPIRKNEL 624 + A ++PVIM+++ D+ + GA D++ KP EL Sbjct: 61 --TDVCKQLRARSSVPVIMVTARDSEIDKVVGLELGADDYVTKPYSAREL 108
>O07130:REGX3_MYCBO Sensory transduction protein regX3 - Mycobacterium bovis| Length = 227 Score = 47.8 bits (112), Expect = 2e-04 Identities = 34/110 (30%), Positives = 56/110 (50%) Frame = +1 Query: 295 VLLAEGDDSTRHVISALLRKCGYHVSAASDGVKAWELLKEKSFKIDLVLTEVELPSMSGF 474 VL+ E ++S ++ LLRK G+ + +DG A L + D+VL ++ LP MSG Sbjct: 4 VLIVEDEESLADPLAFLLRKEGFEATVVTDGPAA--LAEFDRAGADIVLLDLMLPGMSG- 60 Query: 475 LLLSTIMEHDACKNIPVIMMSSNDAVSMVFKCMLKGAADFLVKPIRKNEL 624 + A ++PVIM+++ D+ + GA D++ KP EL Sbjct: 61 --TDVCKQLRARSSVPVIMVTARDSEIDKVVGLELGADDYVTKPYSAREL 108
>Q00934:PILR_PSEAE Type 4 fimbriae expression regulatory protein pilR - Pseudomonas| aeruginosa Length = 445 Score = 47.8 bits (112), Expect = 2e-04 Identities = 32/114 (28%), Positives = 55/114 (48%) Frame = +1 Query: 292 RVLLAEGDDSTRHVISALLRKCGYHVSAASDGVKAWELLKEKSFKIDLVLTEVELPSMSG 471 + L+ + + R ++ L + +A + +A ELL + F DL LT++ LP SG Sbjct: 5 KALIVDDEPDIRELLEITLGRMKLDTRSARNVKEARELLAREPF--DLCLTDMRLPDGSG 62 Query: 472 FLLLSTIMEHDACKNIPVIMMSSNDAVSMVFKCMLKGAADFLVKPIRKNELRNL 633 L+ I + PV M+++ ++ + + GA DFL KP+ LR L Sbjct: 63 LDLVQYIQQRHP--QTPVAMITAYGSLDTAIQALKAGAFDFLTKPVDLGRLREL 114
>P13792:PHOP_BACSU Alkaline phosphatase synthesis transcriptional regulatory protein| phoP - Bacillus subtilis Length = 240 Score = 47.8 bits (112), Expect = 2e-04 Identities = 35/154 (22%), Positives = 73/154 (47%), Gaps = 8/154 (5%) Frame = +1 Query: 283 MPVRVLLAEGDDSTRHVISALLRKCGYHVSAASDGVKAWELLKEKSFKIDLVLTEVELPS 462 M ++L+ + ++S ++ L + GY V ASDG +A L K ++ K DL++ +V LP Sbjct: 1 MNKKILVVDDEESIVTLLQYNLERSGYDVITASDGEEA--LKKAETEKPDLIVLDVMLPK 58 Query: 463 MSGFLLLSTIMEHDACKNIPVIMMSSNDAVSMVFKCMLKGAADFLVKPIRKNELRNLWQH 642 + G + + + P++M+++ D + GA D++ KP E+ + Sbjct: 59 LDGIEVCKQLRQQKLM--FPILMLTAKDEEFDKVLGLELGADDYMTKPFSPREVNARVKA 116 Query: 643 VWRK--------QLANGEIDVQQIQQEENVAEQH 720 + R+ ++ N E++ Q + + + H Sbjct: 117 ILRRSEIRAPSSEMKNDEMEGQIVIGDLKILPDH 150
>Q87GU5:LUXQ_VIBPA Autoinducer 2 sensor kinase/phosphatase luxQ - Vibrio| parahaemolyticus Length = 858 Score = 47.8 bits (112), Expect = 2e-04 Identities = 33/112 (29%), Positives = 56/112 (50%) Frame = +1 Query: 289 VRVLLAEGDDSTRHVISALLRKCGYHVSAASDGVKAWELLKEKSFKIDLVLTEVELPSMS 468 ++VLL E + + ++ A K V A DG++A E LK+ S+ DL+L + +LP + Sbjct: 734 LKVLLVEDNHTNAFILKAFCTKYKMQVDWAKDGLEAMEFLKDHSY--DLILMDNQLPHLG 791 Query: 469 GFLLLSTIMEHDACKNIPVIMMSSNDAVSMVFKCMLKGAADFLVKPIRKNEL 624 G I + + P+ +++ A M GA L+KPI++N L Sbjct: 792 GIETTKEIRQ-NLKLGTPIYACTADTAQETSDAFMEAGANYVLLKPIKENAL 842
>P48027:GACS_PSESY Sensor protein gacS - Pseudomonas syringae pv. syringae| Length = 907 Score = 47.8 bits (112), Expect = 2e-04 Identities = 30/114 (26%), Positives = 57/114 (50%), Gaps = 3/114 (2%) Frame = +1 Query: 292 RVLLAEGDDSTRHVISALLRKCGYHVSAASDGVKAWELLKEKSFKIDLVLTEVELPSMSG 471 RVL + + + ++ LL G V A G A +++++F DLVL +V++P M G Sbjct: 658 RVLCVDDNPANLLLVQTLLEDMGAEVVAVEGGYAAVNAVQQEAF--DLVLMDVQMPGMDG 715 Query: 472 FLLLSTIMEHDACKN---IPVIMMSSNDAVSMVFKCMLKGAADFLVKPIRKNEL 624 I +A +N +P++ ++++ + + G D+L KPI + +L Sbjct: 716 RQATEAIRAWEAERNQSSLPIVALTAHAMANEKRSLLQSGMDDYLTKPISERQL 769
>P30855:EVGS_ECOLI Sensor protein evgS precursor - Escherichia coli| Length = 1197 Score = 47.8 bits (112), Expect = 2e-04 Identities = 40/155 (25%), Positives = 74/155 (47%), Gaps = 13/155 (8%) Frame = +1 Query: 295 VLLAEGDDSTRHVISALLRKCGYHVSAASDGVKAWELLKEKSFKIDLVLTEVELPSMSGF 474 +L+A+ + R ++ L GY V A+DGV+A L K DL++T+V +P+M GF Sbjct: 961 ILIADDHPTNRLLLKRQLNLLGYDVDEATDGVQA--LHKVSMQHYDLLITDVNMPNMDGF 1018 Query: 475 LLLSTIMEHDACKNIPVIMMSSNDAVSMVFKCMLKGAADFLVKPIRKNELRN-------- 630 L + E ++ ++P+ +++N + K + G L KP+ + L+ Sbjct: 1019 ELTRKLREQNS--SLPIWGLTANAQANEREKGLSCGMNLCLFKPLTLDVLKTHLSQLHQV 1076 Query: 631 -----LWQHVWRKQLANGEIDVQQIQQEENVAEQH 720 ++H+ + L N + Q+ QE + QH Sbjct: 1077 AHIAPQYRHLDIEALKNNTANDLQLMQEILMTFQH 1111
>P58402:EVGS_ECO57 Sensor protein evgS precursor - Escherichia coli O157:H7| Length = 1197 Score = 47.8 bits (112), Expect = 2e-04 Identities = 41/169 (24%), Positives = 79/169 (46%), Gaps = 13/169 (7%) Frame = +1 Query: 295 VLLAEGDDSTRHVISALLRKCGYHVSAASDGVKAWELLKEKSFKIDLVLTEVELPSMSGF 474 +L+A+ + R ++ L GY V A+DGV+A L K DL++T+V +P++ GF Sbjct: 961 ILIADDHPTNRLLLKRQLNLLGYDVDEATDGVQA--LHKVSMQHYDLLITDVNMPNVDGF 1018 Query: 475 LLLSTIMEHDACKNIPVIMMSSNDAVSMVFKCMLKGAADFLVKPIRKNELRN-------- 630 L + E ++ ++P+ +++N + K + G L KP+ + L+ Sbjct: 1019 ELTRKLREQNS--SLPIWGLTANAQANEREKGLNCGMNLCLFKPLTLDVLKTHLSQLHQV 1076 Query: 631 -----LWQHVWRKQLANGEIDVQQIQQEENVAEQHGRKTEATKAEHSTQ 762 ++H+ + L N + Q+ QE + QH + A H+ + Sbjct: 1077 AHIVPQYRHLDIEALKNNTANDLQLMQEILMTFQHETHKDLPAAFHALE 1125
>P0ACZ8:CUSR_ECOLI Transcriptional regulatory protein cusR - Escherichia coli| Length = 227 Score = 47.8 bits (112), Expect = 2e-04 Identities = 28/112 (25%), Positives = 60/112 (53%) Frame = +1 Query: 289 VRVLLAEGDDSTRHVISALLRKCGYHVSAASDGVKAWELLKEKSFKIDLVLTEVELPSMS 468 +++L+ E + T ++ L + G+ V A +G+ + L + DL++ ++ LP ++ Sbjct: 1 MKLLIVEDEKKTGEYLTKGLTEAGFVVDLADNGLNGYHLAMTGDY--DLIILDIMLPDVN 58 Query: 469 GFLLLSTIMEHDACKNIPVIMMSSNDAVSMVFKCMLKGAADFLVKPIRKNEL 624 G+ ++ M A K +P++++++ + K + GA D+LVKP EL Sbjct: 59 GWDIVR--MLRSANKGMPILLLTALGTIEHRVKGLELGADDYLVKPFAFAEL 108
>P0ACZ9:CUSR_ECOL6 Transcriptional regulatory protein cusR - Escherichia coli O6| Length = 227 Score = 47.8 bits (112), Expect = 2e-04 Identities = 28/112 (25%), Positives = 60/112 (53%) Frame = +1 Query: 289 VRVLLAEGDDSTRHVISALLRKCGYHVSAASDGVKAWELLKEKSFKIDLVLTEVELPSMS 468 +++L+ E + T ++ L + G+ V A +G+ + L + DL++ ++ LP ++ Sbjct: 1 MKLLIVEDEKKTGEYLTKGLTEAGFVVDLADNGLNGYHLAMTGDY--DLIILDIMLPDVN 58 Query: 469 GFLLLSTIMEHDACKNIPVIMMSSNDAVSMVFKCMLKGAADFLVKPIRKNEL 624 G+ ++ M A K +P++++++ + K + GA D+LVKP EL Sbjct: 59 GWDIVR--MLRSANKGMPILLLTALGTIEHRVKGLELGADDYLVKPFAFAEL 108
>P0AD00:CUSR_ECO57 Transcriptional regulatory protein cusR - Escherichia coli O157:H7| Length = 227 Score = 47.8 bits (112), Expect = 2e-04 Identities = 28/112 (25%), Positives = 60/112 (53%) Frame = +1 Query: 289 VRVLLAEGDDSTRHVISALLRKCGYHVSAASDGVKAWELLKEKSFKIDLVLTEVELPSMS 468 +++L+ E + T ++ L + G+ V A +G+ + L + DL++ ++ LP ++ Sbjct: 1 MKLLIVEDEKKTGEYLTKGLTEAGFVVDLADNGLNGYHLAMTGDY--DLIILDIMLPDVN 58 Query: 469 GFLLLSTIMEHDACKNIPVIMMSSNDAVSMVFKCMLKGAADFLVKPIRKNEL 624 G+ ++ M A K +P++++++ + K + GA D+LVKP EL Sbjct: 59 GWDIVR--MLRSANKGMPILLLTALGTIEHRVKGLELGADDYLVKPFAFAEL 108
>O82256:COL13_ARATH Zinc finger protein CONSTANS-LIKE 13 - Arabidopsis thaliana| (Mouse-ear cress) Length = 332 Score = 47.8 bits (112), Expect = 2e-04 Identities = 19/43 (44%), Positives = 33/43 (76%) Frame = +1 Query: 1840 QREIALNKFRLKRKERCFEKKVRYQSRKLLAEQRPRVKGQFVR 1968 +R AL++++ K+K R +EK +RY+SRK+ AE R R++G+F + Sbjct: 286 ERNSALSRYKEKKKSRRYEKHIRYESRKVRAESRTRIRGRFAK 328
>P33394:RRF1_DESVH Protein rrf1 - Desulfovibrio vulgaris (strain Hildenborough / ATCC| 29579 / NCIMB 8303) Length = 138 Score = 47.4 bits (111), Expect = 3e-04 Identities = 24/85 (28%), Positives = 47/85 (55%) Frame = +1 Query: 283 MPVRVLLAEGDDSTRHVISALLRKCGYHVSAASDGVKAWELLKEKSFKIDLVLTEVELPS 462 MP R+L+ + D + +L R+ GY AA++G A E++ ++ + D+V ++ LP Sbjct: 1 MPARILVVQEDPDIAAYLVSLFRQAGYKADAATEGPDAVEMV--QASRPDVVFLDLALPQ 58 Query: 463 MSGFLLLSTIMEHDACKNIPVIMMS 537 G S ++ C N+PV++++ Sbjct: 59 RWGPRFYSWMVTQPGCGNVPVVLVT 83
>Q9KT84:LUXO1_VIBCH Regulatory protein luxO - Vibrio cholerae| Length = 455 Score = 47.4 bits (111), Expect = 3e-04 Identities = 23/75 (30%), Positives = 42/75 (56%) Frame = +1 Query: 430 DLVLTEVELPSMSGFLLLSTIMEHDACKNIPVIMMSSNDAVSMVFKCMLKGAADFLVKPI 609 DL+L ++ LP M+G +L + E ++P++ M+++ ++ + M GA DFL+KP Sbjct: 42 DLILLDLRLPDMTGMDVLYAVKEKSP--DVPIVFMTAHGSIDTAVEAMRHGAQDFLIKPC 99 Query: 610 RKNELRNLWQHVWRK 654 + LR + RK Sbjct: 100 EADRLRVTVNNAIRK 114
>Q44006:CZCR_RALME Transcriptional activator protein czcR - Ralstonia metallidurans| (strain CH34 / ATCC 43123 / DSM 2839) Length = 225 Score = 47.4 bits (111), Expect = 3e-04 Identities = 31/112 (27%), Positives = 57/112 (50%) Frame = +1 Query: 289 VRVLLAEGDDSTRHVISALLRKCGYHVSAASDGVKAWELLKEKSFKIDLVLTEVELPSMS 468 +RVL+ E + T + L + G+ V A++G + +E + D+++ +V LP M Sbjct: 1 MRVLVVEDEPRTAEYLQKGLSESGFVVDIANNGGDGLHMAEETDY--DVIILDVMLPGMD 58 Query: 469 GFLLLSTIMEHDACKNIPVIMMSSNDAVSMVFKCMLKGAADFLVKPIRKNEL 624 G+ ++ +I PV+ +++ D V+ + GA D+LVKP EL Sbjct: 59 GWTVIKSIRSKS---ETPVLFLTALDDVADRVRGFELGADDYLVKPFAFAEL 107
>Q9P4U6:TCSB_EMENI Two-component system protein B precursor - Emericella nidulans| (Aspergillus nidulans) Length = 1070 Score = 47.0 bits (110), Expect = 4e-04 Identities = 31/119 (26%), Positives = 63/119 (52%), Gaps = 4/119 (3%) Frame = +1 Query: 289 VRVLLAEGDDSTRHVISALLR-KCGYHVSAASDGVKAWELLK---EKSFKIDLVLTEVEL 456 +R L+AE + + V+ +L + Y V+ DG +A++ +K E+ DL+ ++++ Sbjct: 933 IRALVAEDNVVNQEVVLRMLALEDVYDVTVVKDGQEAYDTVKANMEEGKVFDLIFMDIQM 992 Query: 457 PSMSGFLLLSTIMEHDACKNIPVIMMSSNDAVSMVFKCMLKGAADFLVKPIRKNELRNL 633 P++ G + ST + + P++ +S+ S + CM G F+ KPIR+ L+ + Sbjct: 993 PNLDG--IESTRLIRQMGCSAPIVALSAFSEDSNIKDCMNSGMDMFISKPIRRPALKQV 1049
>P52942:SP0F_BACTK Sporulation initiation phosphotransferase F - Bacillus| thuringiensis subsp. kurstaki Length = 122 Score = 47.0 bits (110), Expect = 4e-04 Identities = 30/115 (26%), Positives = 61/115 (53%) Frame = +1 Query: 283 MPVRVLLAEGDDSTRHVISALLRKCGYHVSAASDGVKAWELLKEKSFKIDLVLTEVELPS 462 M ++L+ + R ++ + +K GY A++G +A +++K+ + DLV+ ++++P Sbjct: 1 MEGKILIVDDQYGIRVLLHEVFQKEGYQTFQAANGFQALDIVKKDN--PDLVVLDMKIPG 58 Query: 463 MSGFLLLSTIMEHDACKNIPVIMMSSNDAVSMVFKCMLKGAADFLVKPIRKNELR 627 M G + E D ++I VI+MS+ + M+ + GA KP +E+R Sbjct: 59 MDGIEIFKACKEID--ESIKVILMSAYGELDMIQEAKDLGALMHFAKPFDIDEIR 111
>Q50136:PRRA_MYCLE Transcriptional regulatory protein prrA - Mycobacterium leprae| Length = 233 Score = 47.0 bits (110), Expect = 4e-04 Identities = 31/111 (27%), Positives = 55/111 (49%) Frame = +1 Query: 292 RVLLAEGDDSTRHVISALLRKCGYHVSAASDGVKAWELLKEKSFKIDLVLTEVELPSMSG 471 RVL+ + D + LR G+ VS A DG +A L + D ++ ++ +P + G Sbjct: 9 RVLVVDDDSDVLASLERGLRLSGFEVSTAIDGAEA--LRNATETRPDAIVLDINMPVLDG 66 Query: 472 FLLLSTIMEHDACKNIPVIMMSSNDAVSMVFKCMLKGAADFLVKPIRKNEL 624 +++ + D ++PV ++S+ +V + GA D+LVKP EL Sbjct: 67 VSVVTALRAMD--NDVPVCVLSARSSVDDRVAGLEAGADDYLVKPFVLAEL 115
>Q8Z7H2:PHOP_SALTI Virulence transcriptional regulatory protein phoP - Salmonella| typhi Length = 224 Score = 47.0 bits (110), Expect = 4e-04 Identities = 35/137 (25%), Positives = 65/137 (47%), Gaps = 2/137 (1%) Frame = +1 Query: 289 VRVLLAEGDDSTRHVISALLRKCGYHVSAASDGVKAWELLKEKSFKIDLVLTEVELPSMS 468 +RVL+ E + RH + L+ G+ V AA D +A L E D+ + ++ LP Sbjct: 2 MRVLVVEDNALLRHHLKVQLQDSGHQVDAAEDAREADYYLNE--HLPDIAIVDLGLPDED 59 Query: 469 GFLLLSTIMEHDACKNIPVIMMSSNDAVSMVFKCMLKGAADFLVKPIRKNELRNLWQHVW 648 G L+ D ++PV+++++ + + + GA D++ KP E+ Q + Sbjct: 60 GLSLIRRWRSSDV--SLPVLVLTAREGWQDKVEVLSSGADDYVTKPFHIEEVMARMQALM 117 Query: 649 RKQ--LANGEIDVQQIQ 693 R+ LA+ I++ Q Sbjct: 118 RRNSGLASQVINISPFQ 134
>P23620:PHOB_PSEAE Phosphate regulon transcriptional regulatory protein phoB -| Pseudomonas aeruginosa Length = 229 Score = 47.0 bits (110), Expect = 4e-04 Identities = 29/115 (25%), Positives = 55/115 (47%) Frame = +1 Query: 280 MMPVRVLLAEGDDSTRHVISALLRKCGYHVSAASDGVKAWELLKEKSFKIDLVLTEVELP 459 M+ +L+ + + R +I+ L GY A + +A ++ ++ K DL+L + LP Sbjct: 1 MVGKTILIVDDEAPIREMIAVALEMAGYECLEAENTQQAHAVIVDR--KPDLILLDWMLP 58 Query: 460 SMSGFLLLSTIMEHDACKNIPVIMMSSNDAVSMVFKCMLKGAADFLVKPIRKNEL 624 SG L + + +IP+IM+++ + + GA D++ KP EL Sbjct: 59 GTSGIELARRLKRDELTVDIPIIMLTAKGEEDNKIQGLEVGADDYITKPFSPREL 113
>Q9LRH6:GAT26_ARATH GATA transcription factor 26 - Arabidopsis thaliana (Mouse-ear cress)| Length = 309 Score = 47.0 bits (110), Expect = 4e-04 Identities = 24/43 (55%), Positives = 30/43 (69%) Frame = +1 Query: 1834 LSQREIALNKFRLKRKERCFEKKVRYQSRKLLAEQRPRVKGQF 1962 L QR +L++FR KR RCFEKKVRY R+ +A + R KGQF Sbjct: 143 LPQRAQSLDRFRKKRNARCFEKKVRYGVRQEVALRMARNKGQF 185
>Q31HL9:CHEB_THICR Chemotaxis response regulator protein-glutamate methylesterase -| Thiomicrospira crunogena (strain XCL-2) Length = 376 Score = 47.0 bits (110), Expect = 4e-04 Identities = 59/259 (22%), Positives = 108/259 (41%), Gaps = 14/259 (5%) Frame = +1 Query: 280 MMPVRVLLAEGDDSTRHVISALLRKCGYH--VSAASDGVKAWELLKEKSFKIDLVLTEVE 453 M ++VL+ + R ++ +L+ V ASD A E K K D++ +VE Sbjct: 1 MSKIKVLIVDDSALVRQMLQEMLKSDPEIEVVGTASDPYDARE--KVKQLHPDVLTLDVE 58 Query: 454 LPSMSGFLLLSTIMEHDACKNIPVIMMSS--NDAVSMVFKCMLKGAADFLVKPIRKNELR 627 +P M G L +M +PV+M+S+ + F+ + GA DF+ KP K +L+ Sbjct: 59 MPRMDGVTFLKNLMR---LHPLPVVMISTLTEKGADITFEALDLGAVDFVAKP--KIDLQ 113 Query: 628 NLWQ----HVWRKQLANGEIDVQQIQQE--ENVAEQHGRKTEATKAEHSTQNVVRKNREC 789 + ++ + RK ++ Q++++ VA + + +K VV K Sbjct: 114 HTFEDYTDEICRKVKTASKVSKWQLERQYARYVANKESKPKVLSKPGSLVSKVVEKFTTD 173 Query: 790 SEQESDAQSSCTRSEPE--AESKHTNSFLEFKQITERQSSTDPKNTVENRDPENPS--EN 957 + A S ++ + A T K++ R ST P + P + S Sbjct: 174 AIVPKKAPSDFSKPSHKVIALGASTGGTEAIKEVLMRLPSTTPAIVITQHIPASFSLPFA 233 Query: 958 KRKKASTDIEVVHIIDDAP 1014 +R + +++EV D P Sbjct: 234 QRMNSVSEMEVTQAEDRQP 252
>Q5V0B3:CHEB_HALMA Chemotaxis response regulator protein-glutamate methylesterase -| Haloarcula marismortui (Halobacterium marismortui) Length = 369 Score = 47.0 bits (110), Expect = 4e-04 Identities = 37/109 (33%), Positives = 56/109 (51%), Gaps = 3/109 (2%) Frame = +1 Query: 289 VRVLLAEGDDSTRHVISALLRKCGYHVSA-ASDGVKAWELLKEKSFKIDLVLTEVELPSM 465 VR ++A+ R VIS +L G V A A DG +A + E + D+V +VE+P M Sbjct: 5 VRAVVADDSHFMRSVISDILSDGGIDVVAQARDGEEAVSAVIEH--RPDVVTMDVEMPVM 62 Query: 466 SGFLLLSTIMEHDACKNIPVIMMSSN--DAVSMVFKCMLKGAADFLVKP 606 +G IM PV+M+S++ + + F+ + KGA DF KP Sbjct: 63 NGIEATERIMAESPT---PVLMLSAHTDENADVTFEALDKGAVDFFTKP 108
>Q65JK6:CHEB_BACLD Chemotaxis response regulator protein-glutamate methylesterase -| Bacillus licheniformis (strain DSM 13 / ATCC 14580) Length = 357 Score = 47.0 bits (110), Expect = 4e-04 Identities = 31/109 (28%), Positives = 56/109 (51%), Gaps = 3/109 (2%) Frame = +1 Query: 289 VRVLLAEGDDSTRHVISALLRKCGYHVSAASDGVKAWELLKE-KSFKIDLVLTEVELPSM 465 +RVL+ + R++I+ L + ++ A E L++ K + D++ ++E+P M Sbjct: 2 IRVLVVDDSAFMRNMITKFLTS-NHEIAVAGTARNGEEALQKIKELRPDVITLDIEMPVM 60 Query: 466 SGFLLLSTIMEHDACKNIPVIMMSS--NDAVSMVFKCMLKGAADFLVKP 606 +G L IM D +PV+M+SS + +C+ GA DF+ KP Sbjct: 61 NGKETLKRIMASDP---LPVVMVSSLTQQGADITIECLELGAIDFVAKP 106
>O34903:YKOG_BACSU Uncharacterized sensory transduction protein ykoG - Bacillus| subtilis Length = 228 Score = 46.6 bits (109), Expect = 5e-04 Identities = 30/110 (27%), Positives = 55/110 (50%) Frame = +1 Query: 295 VLLAEGDDSTRHVISALLRKCGYHVSAASDGVKAWELLKEKSFKIDLVLTEVELPSMSGF 474 +L+ E ++ V+ L GY V+ +G + + E + LVL +V LP +SG Sbjct: 6 ILIVEDEEKIARVLQLELEYEGYSVTIKHNGTEGLDAAAEGGYS--LVLLDVMLPGLSGL 63 Query: 475 LLLSTIMEHDACKNIPVIMMSSNDAVSMVFKCMLKGAADFLVKPIRKNEL 624 +L + + D+ PVI++++ D++ + GA D++ KP EL Sbjct: 64 EVLRRLRKTDS--QTPVILLTARDSIPDKVTGLDIGANDYVTKPFEIEEL 111
>P48259:YCF27_CYAPA Probable transcriptional regulator ycf27 - Cyanophora paradoxa| Length = 239 Score = 46.6 bits (109), Expect = 5e-04 Identities = 29/111 (26%), Positives = 59/111 (53%) Frame = +1 Query: 292 RVLLAEGDDSTRHVISALLRKCGYHVSAASDGVKAWELLKEKSFKIDLVLTEVELPSMSG 471 ++L+ + + S R ++ L GY V A+DG +A + + + +LV+ +V +P + G Sbjct: 7 KILVVDDEISIRRILETRLSMIGYEVVTAADGEEALTIFQLE--HPNLVVLDVMMPKLDG 64 Query: 472 FLLLSTIMEHDACKNIPVIMMSSNDAVSMVFKCMLKGAADFLVKPIRKNEL 624 + + + + +IP+IM+++ V+ + GA D++VKP EL Sbjct: 65 YGVCQELRKE---SDIPIIMLTALGDVADRITGLELGADDYVVKPFSPKEL 112
>P14146:PHOP_SALTY Virulence transcriptional regulatory protein phoP - Salmonella| typhimurium Length = 224 Score = 46.6 bits (109), Expect = 5e-04 Identities = 35/137 (25%), Positives = 65/137 (47%), Gaps = 2/137 (1%) Frame = +1 Query: 289 VRVLLAEGDDSTRHVISALLRKCGYHVSAASDGVKAWELLKEKSFKIDLVLTEVELPSMS 468 +RVL+ E + RH + L+ G+ V AA D +A L E D+ + ++ LP Sbjct: 2 MRVLVVEDNALLRHHLKVQLQDSGHQVDAAEDAREADYYLNE--HLPDIAIVDLGLPDED 59 Query: 469 GFLLLSTIMEHDACKNIPVIMMSSNDAVSMVFKCMLKGAADFLVKPIRKNELRNLWQHVW 648 G L+ D ++PV+++++ + + + GA D++ KP E+ Q + Sbjct: 60 GLSLIRRWRSSDV--SLPVLVLTAREGWQDKVEVLSSGADDYVTKPFHIEEVMARMQALM 117 Query: 649 RKQ--LANGEIDVQQIQ 693 R+ LA+ I++ Q Sbjct: 118 RRNSGLASQVINIPPFQ 134
>Q5PMJ1:PHOP_SALPA Virulence transcriptional regulatory protein phoP - Salmonella| paratyphi-a Length = 224 Score = 46.6 bits (109), Expect = 5e-04 Identities = 35/137 (25%), Positives = 65/137 (47%), Gaps = 2/137 (1%) Frame = +1 Query: 289 VRVLLAEGDDSTRHVISALLRKCGYHVSAASDGVKAWELLKEKSFKIDLVLTEVELPSMS 468 +RVL+ E + RH + L+ G+ V AA D +A L E D+ + ++ LP Sbjct: 2 MRVLVVEDNALLRHHLKVQLQDSGHQVDAAEDAREADYYLNE--HLPDIAIVDLGLPDED 59 Query: 469 GFLLLSTIMEHDACKNIPVIMMSSNDAVSMVFKCMLKGAADFLVKPIRKNELRNLWQHVW 648 G L+ D ++PV+++++ + + + GA D++ KP E+ Q + Sbjct: 60 GLSLIRRWRSSDV--SLPVLVLTAREGWQDKVEVLSSGADDYVTKPFHIEEVMARMQALM 117 Query: 649 RKQ--LANGEIDVQQIQ 693 R+ LA+ I++ Q Sbjct: 118 RRNSGLASQVINIPPFQ 134
>Q7MM78:LUXO_VIBVY Regulatory protein luxO - Vibrio vulnificus (strain YJ016)| Length = 453 Score = 46.6 bits (109), Expect = 5e-04 Identities = 30/118 (25%), Positives = 56/118 (47%) Frame = +1 Query: 301 LAEGDDSTRHVISALLRKCGYHVSAASDGVKAWELLKEKSFKIDLVLTEVELPSMSGFLL 480 + E S + + L G ++ G A + LK + DL+L ++ LP M+G + Sbjct: 1 MVEDTASVAALYRSYLMPLGIDINIVGTGRDAIDSLKHRI--PDLILLDLRLPDMTGMDV 58 Query: 481 LSTIMEHDACKNIPVIMMSSNDAVSMVFKCMLKGAADFLVKPIRKNELRNLWQHVWRK 654 L + ++P+I M+++ ++ + M G+ DFL+KP + LR + RK Sbjct: 59 LHAVKASHP--DVPIIFMTAHGSIDTAVEAMRHGSQDFLIKPCEADRLRVTVNNAIRK 114
>Q8CWJ5:LUXO_VIBVU Regulatory protein luxO - Vibrio vulnificus| Length = 453 Score = 46.6 bits (109), Expect = 5e-04 Identities = 30/118 (25%), Positives = 56/118 (47%) Frame = +1 Query: 301 LAEGDDSTRHVISALLRKCGYHVSAASDGVKAWELLKEKSFKIDLVLTEVELPSMSGFLL 480 + E S + + L G ++ G A + LK + DL+L ++ LP M+G + Sbjct: 1 MVEDTASVAALYRSYLMPLGIDINIVGTGRDAIDSLKHRI--PDLILLDLRLPDMTGMDV 58 Query: 481 LSTIMEHDACKNIPVIMMSSNDAVSMVFKCMLKGAADFLVKPIRKNELRNLWQHVWRK 654 L + ++P+I M+++ ++ + M G+ DFL+KP + LR + RK Sbjct: 59 LHAVKASHP--DVPIIFMTAHGSIDTAVEAMRHGSQDFLIKPCEADRLRVTVNNAIRK 114
>Q87MX7:LUXO_VIBPA Regulatory protein luxO - Vibrio parahaemolyticus| Length = 453 Score = 46.6 bits (109), Expect = 5e-04 Identities = 30/118 (25%), Positives = 56/118 (47%) Frame = +1 Query: 301 LAEGDDSTRHVISALLRKCGYHVSAASDGVKAWELLKEKSFKIDLVLTEVELPSMSGFLL 480 + E S + + L G ++ G A E L + DL+L ++ LP M+G + Sbjct: 1 MVEDTASVAALYRSYLTPLGIDINIVGTGRDAIESLNHRI--PDLILLDLRLPDMTGMDV 58 Query: 481 LSTIMEHDACKNIPVIMMSSNDAVSMVFKCMLKGAADFLVKPIRKNELRNLWQHVWRK 654 L + + ++P+I M+++ ++ + M G+ DFL+KP + LR + RK Sbjct: 59 LHAVKKSHP--DVPIIFMTAHGSIDTAVEAMRHGSQDFLIKPCEADRLRVTVNNAIRK 114
>P54299:LUXO_VIBHA Luminescence regulatory protein luxO - Vibrio harveyi| Length = 453 Score = 46.6 bits (109), Expect = 5e-04 Identities = 30/118 (25%), Positives = 56/118 (47%) Frame = +1 Query: 301 LAEGDDSTRHVISALLRKCGYHVSAASDGVKAWELLKEKSFKIDLVLTEVELPSMSGFLL 480 + E S + + L G ++ G A E L + DL+L ++ LP M+G + Sbjct: 1 MVEDTASVAALYRSYLTPLGIDINIVGTGRDAIESLNHRI--PDLILLDLRLPDMTGMDV 58 Query: 481 LSTIMEHDACKNIPVIMMSSNDAVSMVFKCMLKGAADFLVKPIRKNELRNLWQHVWRK 654 L + + ++P+I M+++ ++ + M G+ DFL+KP + LR + RK Sbjct: 59 LHAVKKSHP--DVPIIFMTAHGSIDTAVEAMRHGSQDFLIKPCEADRLRVTVNNAIRK 114
>Q9LUA9:COL10_ARATH Zinc finger protein CONSTANS-LIKE 10 - Arabidopsis thaliana| (Mouse-ear cress) Length = 373 Score = 46.6 bits (109), Expect = 5e-04 Identities = 22/50 (44%), Positives = 35/50 (70%) Frame = +1 Query: 1831 HLSQREIALNKFRLKRKERCFEKKVRYQSRKLLAEQRPRVKGQFVRQDQS 1980 H + R A+ +++ K+K R F+K+VRY SRK A+ R RVKG+FV+ ++ Sbjct: 312 HATTRNNAVMRYKEKKKARKFDKRVRYVSRKERADVRRRVKGRFVKSGEA 361
>P0A4H5:CHEY_LISMO Chemotaxis protein cheY - Listeria monocytogenes| Length = 119 Score = 46.6 bits (109), Expect = 5e-04 Identities = 33/113 (29%), Positives = 59/113 (52%), Gaps = 1/113 (0%) Frame = +1 Query: 289 VRVLLAEGDDSTRHVISALLRKCGYHVSA-ASDGVKAWELLKEKSFKIDLVLTEVELPSM 465 +++L+ + R +I +++ + V A A +G++A + K K D+V ++ +P M Sbjct: 2 LKLLIVDDAMFMRTMIKNIVKDSDFEVVAEAENGLEA--VKKYDEVKPDIVTLDITMPEM 59 Query: 466 SGFLLLSTIMEHDACKNIPVIMMSSNDAVSMVFKCMLKGAADFLVKPIRKNEL 624 G L+ IM D + VIM S+ MV + KGA DF+VKP + + + Sbjct: 60 DGLEALAQIMAKDP--SAKVIMCSAMGQQGMVVDAIKKGAKDFIVKPFQADRV 110
>P0A4H6:CHEY_LISIN Chemotaxis protein cheY - Listeria innocua| Length = 119 Score = 46.6 bits (109), Expect = 5e-04 Identities = 33/113 (29%), Positives = 59/113 (52%), Gaps = 1/113 (0%) Frame = +1 Query: 289 VRVLLAEGDDSTRHVISALLRKCGYHVSA-ASDGVKAWELLKEKSFKIDLVLTEVELPSM 465 +++L+ + R +I +++ + V A A +G++A + K K D+V ++ +P M Sbjct: 2 LKLLIVDDAMFMRTMIKNIVKDSDFEVVAEAENGLEA--VKKYDEVKPDIVTLDITMPEM 59 Query: 466 SGFLLLSTIMEHDACKNIPVIMMSSNDAVSMVFKCMLKGAADFLVKPIRKNEL 624 G L+ IM D + VIM S+ MV + KGA DF+VKP + + + Sbjct: 60 DGLEALAQIMAKDP--SAKVIMCSAMGQQGMVVDAIKKGAKDFIVKPFQADRV 110
>Q6AJV3:CHEB_DESPS Chemotaxis response regulator protein-glutamate methylesterase -| Desulfotalea psychrophila Length = 364 Score = 46.6 bits (109), Expect = 5e-04 Identities = 40/152 (26%), Positives = 67/152 (44%), Gaps = 1/152 (0%) Frame = +1 Query: 280 MMPVRVLLAEGDDSTRHVISALLRKC-GYHVSAASDGVKAWELLKEKSFKIDLVLTEVEL 456 M +RVL+ + R ++S LLR+ G V + K L K + K DL+ ++E+ Sbjct: 1 MKNLRVLVVDDTILYRKIVSDLLREIPGIEVIGVAHNGKI-ALDKIRLSKPDLITLDIEM 59 Query: 457 PSMSGFLLLSTIMEHDACKNIPVIMMSSNDAVSMVFKCMLKGAADFLVKPIRKNELRNLW 636 P M+G LL + + ++ ++D M K + GA DF++KP K N Sbjct: 60 PVMNGIELLEHLKDIPDAPGAVMLSTLTSDGSRMTMKALELGAFDFILKPQEKTPAAN-- 117 Query: 637 QHVWRKQLANGEIDVQQIQQEENVAEQHGRKT 732 + LAN + + + N+ R T Sbjct: 118 ----KAALANSLKQIVKTYRLRNIGFSRTRAT 145
>O29221:CHEB_ARCFU Chemotaxis response regulator protein-glutamate methylesterase -| Archaeoglobus fulgidus Length = 349 Score = 46.6 bits (109), Expect = 5e-04 Identities = 33/109 (30%), Positives = 53/109 (48%), Gaps = 3/109 (2%) Frame = +1 Query: 289 VRVLLAEGDDSTRHVISALLRKCGYHV-SAASDGVKAWELLKEKSFKIDLVLTEVELPSM 465 +RVL+ + R ++ +L K G V A +G +A E K K D++ ++ +P M Sbjct: 1 MRVLVVDDSALVRMAVTDILTKAGIEVVDTAKNGREAVE--KALKLKPDVITLDINMPEM 58 Query: 466 SGFLLLSTIMEHDACKNIPVIMMSS--NDAVSMVFKCMLKGAADFLVKP 606 G L IME + PV+M+SS + + + GA DF+ KP Sbjct: 59 DGLTALKLIMEK---QPTPVVMLSSLTKEGARETLEALKIGAVDFVTKP 104
>O34951:BCER_BACSU Sensory transduction protein bceR - Bacillus subtilis| Length = 231 Score = 46.6 bits (109), Expect = 5e-04 Identities = 48/179 (26%), Positives = 75/179 (41%), Gaps = 9/179 (5%) Frame = +1 Query: 292 RVLLAEGDDSTRHVISALLRKCGYHVSAASDGVKAWELLKEKSFKIDLVLTEVELPSMSG 471 ++LL E D+S H I L Y V D + L + + D V+ +V+LP G Sbjct: 3 KLLLIEDDESLFHEIKDRLTGWSYDVYGIQDFSQV--LQEFAAVNPDCVIIDVQLPKFDG 60 Query: 472 FLLLSTIMEHDACKNIPVIMMSSNDAVSMVFKCMLKGAADFLVKPIRKNELRNLWQHVWR 651 F I N+P++ +SS D + + M GA DF+ KP + L Q ++R Sbjct: 61 FHWCRLIRSRS---NVPILFLSSRDHPADMVMSMQLGADDFIQKPFHFDVLIAKIQAMFR 117 Query: 652 K-QLANGEIDV------QQIQQEENVAEQHGRKTEATKAEH--STQNVVRKNRECSEQE 801 + N E + E+N+ E TK E Q + +KN+ S +E Sbjct: 118 RVHHYNTEPSTIKTWCGAAVDAEQNLVSNDKGSVELTKNEMFILKQLIEQKNKIVSREE 176
>P0AEC4:ARCB_SHIFL Aerobic respiration control sensor protein arcB - Shigella flexneri| Length = 778 Score = 46.6 bits (109), Expect = 5e-04 Identities = 38/155 (24%), Positives = 69/155 (44%) Frame = +1 Query: 274 LPMMPVRVLLAEGDDSTRHVISALLRKCGYHVSAASDGVKAWELLKEKSFKIDLVLTEVE 453 +P+ + VLL E + V ++L K G V A G A E+ K + DLVL +++ Sbjct: 521 MPLPALNVLLVEDIELNVIVARSVLEKLGNSVDVAMTGKAALEMFKPGEY--DLVLLDIQ 578 Query: 454 LPSMSGFLLLSTIMEHDACKNIPVIMMSSNDAVSMVFKCMLKGAADFLVKPIRKNELRNL 633 LP M+G + + + +++P ++ + + + + + G D L KP+ L + Sbjct: 579 LPDMTGLDISRELTKRYPREDLPPLVALTANVLKDKQEYLNAGMDDVLSKPLSVPALTAM 638 Query: 634 WQHVWRKQLANGEIDVQQIQQEENVAEQHGRKTEA 738 + W D Q +E V + K+EA Sbjct: 639 IKKFW---------DTQD-DEESTVTTEENSKSEA 663
>P0AEC3:ARCB_ECOLI Aerobic respiration control sensor protein arcB - Escherichia coli| Length = 778 Score = 46.6 bits (109), Expect = 5e-04 Identities = 38/155 (24%), Positives = 69/155 (44%) Frame = +1 Query: 274 LPMMPVRVLLAEGDDSTRHVISALLRKCGYHVSAASDGVKAWELLKEKSFKIDLVLTEVE 453 +P+ + VLL E + V ++L K G V A G A E+ K + DLVL +++ Sbjct: 521 MPLPALNVLLVEDIELNVIVARSVLEKLGNSVDVAMTGKAALEMFKPGEY--DLVLLDIQ 578 Query: 454 LPSMSGFLLLSTIMEHDACKNIPVIMMSSNDAVSMVFKCMLKGAADFLVKPIRKNELRNL 633 LP M+G + + + +++P ++ + + + + + G D L KP+ L + Sbjct: 579 LPDMTGLDISRELTKRYPREDLPPLVALTANVLKDKQEYLNAGMDDVLSKPLSVPALTAM 638 Query: 634 WQHVWRKQLANGEIDVQQIQQEENVAEQHGRKTEA 738 + W D Q +E V + K+EA Sbjct: 639 IKKFW---------DTQD-DEESTVTTEENSKSEA 663
>P58363:ARCB_ECO57 Aerobic respiration control sensor protein arcB - Escherichia coli| O157:H7 Length = 778 Score = 46.6 bits (109), Expect = 5e-04 Identities = 38/155 (24%), Positives = 69/155 (44%) Frame = +1 Query: 274 LPMMPVRVLLAEGDDSTRHVISALLRKCGYHVSAASDGVKAWELLKEKSFKIDLVLTEVE 453 +P+ + VLL E + V ++L K G V A G A E+ K + DLVL +++ Sbjct: 521 MPLPALNVLLVEDIELNVIVARSVLEKLGNSVDVAMTGKAALEMFKPGEY--DLVLLDIQ 578 Query: 454 LPSMSGFLLLSTIMEHDACKNIPVIMMSSNDAVSMVFKCMLKGAADFLVKPIRKNELRNL 633 LP M+G + + + +++P ++ + + + + + G D L KP+ L + Sbjct: 579 LPDMTGLDISRELTKRYPREDLPPLVALTANVLKDKQEYLNAGMDDVLSKPLSVPALTAM 638 Query: 634 WQHVWRKQLANGEIDVQQIQQEENVAEQHGRKTEA 738 + W D Q +E V + K+EA Sbjct: 639 IKKFW---------DTQD-DEESTVTTEENSKSEA 663
>P24086:Y2151_LEPIN Uncharacterized protein LA_2151 - Leptospira interrogans| Length = 135 Score = 46.2 bits (108), Expect = 6e-04 Identities = 30/114 (26%), Positives = 58/114 (50%), Gaps = 1/114 (0%) Frame = +1 Query: 286 PVRVLLAEGDDSTRHVISALLRKCGYHVSAASDGVKAWELLKEKSFKIDLVLTEVELPSM 465 P +VL+AE ++ +L GY V ++ K L ++ +DL+ ++ LP M Sbjct: 11 PYQVLIAENSRFQAKQLAQILESEGYQVIGFAENGKELVKLYDEHRLVDLITLDLNLPVM 70 Query: 466 SGFLLLSTIMEHDACKNIPVIMMSSNDAVSMVFKCML-KGAADFLVKPIRKNEL 624 G+ +T E +P I++ S + V K ++ +GA D++ KPI++ ++ Sbjct: 71 DGY---ATFFEIKGKGVLPRIVIVSEENTPAVLKNLIDEGAMDYIPKPIKREKI 121
>Q72RH6:Y1769_LEPIC Uncharacterized protein LIC_11769 - Leptospira interrogans| serogroup Icterohaemorrhagiae serovar copenhageni Length = 135 Score = 46.2 bits (108), Expect = 6e-04 Identities = 30/114 (26%), Positives = 58/114 (50%), Gaps = 1/114 (0%) Frame = +1 Query: 286 PVRVLLAEGDDSTRHVISALLRKCGYHVSAASDGVKAWELLKEKSFKIDLVLTEVELPSM 465 P +VL+AE ++ +L GY V ++ K L ++ +DL+ ++ LP M Sbjct: 11 PYQVLIAENSRFQAKQLAQILESEGYQVIGFAENGKELVKLYDEHRLVDLITLDLNLPVM 70 Query: 466 SGFLLLSTIMEHDACKNIPVIMMSSNDAVSMVFKCML-KGAADFLVKPIRKNEL 624 G+ +T E +P I++ S + V K ++ +GA D++ KPI++ ++ Sbjct: 71 DGY---ATFFEIKGKGVLPRIVIVSEENTPAVLKNLIDEGAMDYIPKPIKREKI 121
>P0A5Z6:PRRA_MYCTU Transcriptional regulatory protein prrA - Mycobacterium| tuberculosis Length = 233 Score = 46.2 bits (108), Expect = 6e-04 Identities = 30/111 (27%), Positives = 55/111 (49%) Frame = +1 Query: 292 RVLLAEGDDSTRHVISALLRKCGYHVSAASDGVKAWELLKEKSFKIDLVLTEVELPSMSG 471 RVL+ + D + LR G+ V+ A DG +A E + D ++ ++ +P + G Sbjct: 9 RVLVVDDDSDVLASLERGLRLSGFEVATAVDGAEALRSATEN--RPDAIVLDINMPVLDG 66 Query: 472 FLLLSTIMEHDACKNIPVIMMSSNDAVSMVFKCMLKGAADFLVKPIRKNEL 624 +++ + D ++PV ++S+ +V + GA D+LVKP EL Sbjct: 67 VSVVTALRAMD--NDVPVCVLSARSSVDDRVAGLEAGADDYLVKPFVLAEL 115
>P0A5Z7:PRRA_MYCBO Transcriptional regulatory protein prrA - Mycobacterium bovis| Length = 233 Score = 46.2 bits (108), Expect = 6e-04 Identities = 30/111 (27%), Positives = 55/111 (49%) Frame = +1 Query: 292 RVLLAEGDDSTRHVISALLRKCGYHVSAASDGVKAWELLKEKSFKIDLVLTEVELPSMSG 471 RVL+ + D + LR G+ V+ A DG +A E + D ++ ++ +P + G Sbjct: 9 RVLVVDDDSDVLASLERGLRLSGFEVATAVDGAEALRSATEN--RPDAIVLDINMPVLDG 66 Query: 472 FLLLSTIMEHDACKNIPVIMMSSNDAVSMVFKCMLKGAADFLVKPIRKNEL 624 +++ + D ++PV ++S+ +V + GA D+LVKP EL Sbjct: 67 VSVVTALRAMD--NDVPVCVLSARSSVDDRVAGLEAGADDYLVKPFVLAEL 115
>P06184:PGTA_SALTY Phosphoglycerate transport system transcriptional regulatory| protein pgtA - Salmonella typhimurium Length = 415 Score = 46.2 bits (108), Expect = 6e-04 Identities = 33/121 (27%), Positives = 60/121 (49%) Frame = +1 Query: 295 VLLAEGDDSTRHVISALLRKCGYHVSAASDGVKAWELLKEKSFKIDLVLTEVELPSMSGF 474 +LL + D + +L + GY V + +A E +K I VL++V +P SG Sbjct: 8 ILLIDDDVDVLDAYTQMLEQAGYRVRGFTHPFEAKEWVKADWEGI--VLSDVCMPGCSGI 65 Query: 475 LLLSTIMEHDACKNIPVIMMSSNDAVSMVFKCMLKGAADFLVKPIRKNELRNLWQHVWRK 654 L++ + D +P+++++ + V M + KGA DFL KP+ +L L + R+ Sbjct: 66 DLMTLFHQDD--DQLPILLITGHGDVPMAVDAVKKGAWDFLQKPVDPGKLLILIEDALRQ 123 Query: 655 Q 657 + Sbjct: 124 R 124
>P41789:NTRC_SALTY Nitrogen regulation protein NR(I) - Salmonella typhimurium| Length = 469 Score = 46.2 bits (108), Expect = 6e-04 Identities = 40/160 (25%), Positives = 68/160 (42%) Frame = +1 Query: 295 VLLAEGDDSTRHVISALLRKCGYHVSAASDGVKAWELLKEKSFKIDLVLTEVELPSMSGF 474 V + + D S R V+ L G + +G + L K+ D++L+++ +P M G Sbjct: 6 VWVVDDDSSIRWVLERALAGAGLTCTTFENGNEVLAALASKT--PDVLLSDIRMPGMDGL 63 Query: 475 LLLSTIMEHDACKNIPVIMMSSNDAVSMVFKCMLKGAADFLVKPIRKNELRNLWQHVWRK 654 LL I + +PVI+M+++ + +GA D+L KP +E Sbjct: 64 ALLKQIKQRHPM--LPVIIMTAHSDLDAAVSAYQQGAFDYLPKPFDIDE---------AV 112 Query: 655 QLANGEIDVQQIQQEENVAEQHGRKTEATKAEHSTQNVVR 774 L I Q QQ+ E +G T+ + Q+V R Sbjct: 113 ALVERAISHYQEQQQPRNIEVNGPTTDMIGEAPAMQDVFR 152
>P45671:NTRC_AZOBR Nitrogen assimilation regulatory protein - Azospirillum brasilense| Length = 481 Score = 46.2 bits (108), Expect = 6e-04 Identities = 29/115 (25%), Positives = 57/115 (49%) Frame = +1 Query: 280 MMPVRVLLAEGDDSTRHVISALLRKCGYHVSAASDGVKAWELLKEKSFKIDLVLTEVELP 459 M +L+A+ D + R V++ L + G+ V + W + + DL++T+V +P Sbjct: 1 MSAATILVADDDRAIRTVLTQALARLGHEVRTTGNASTLWRWVADGQG--DLIITDVVMP 58 Query: 460 SMSGFLLLSTIMEHDACKNIPVIMMSSNDAVSMVFKCMLKGAADFLVKPIRKNEL 624 +G L+ I + ++ +I+MS+ + + K +GA ++L KP EL Sbjct: 59 DENGLDLIPRIKK--IRPDLRIIVMSAQNTLITAVKAAERGAFEYLPKPFDLKEL 111
>P54302:LUXQ_VIBHA Autoinducer 2 sensor kinase/phosphatase luxQ - Vibrio harveyi| Length = 859 Score = 46.2 bits (108), Expect = 6e-04 Identities = 31/112 (27%), Positives = 56/112 (50%) Frame = +1 Query: 289 VRVLLAEGDDSTRHVISALLRKCGYHVSAASDGVKAWELLKEKSFKIDLVLTEVELPSMS 468 ++VLL E + + ++ A +K V A DG+ A ELL + ++ DL+L + +LP + Sbjct: 735 LKVLLVEDNHTNAFILQAFCKKYKMQVDWAKDGLDAMELLSDTTY--DLILMDNQLPHLG 792 Query: 469 GFLLLSTIMEHDACKNIPVIMMSSNDAVSMVFKCMLKGAADFLVKPIRKNEL 624 G I + + P+ +++ A M GA ++KPI++N L Sbjct: 793 GIETTHEIRQ-NLRLGTPIYACTADTAKETSDAFMAAGANYVMLKPIKENAL 843
>Q9AE24:RPRY_BACFR Transcriptional regulatory protein rprY - Bacteroides fragilis| Length = 236 Score = 45.8 bits (107), Expect = 8e-04 Identities = 29/112 (25%), Positives = 52/112 (46%) Frame = +1 Query: 289 VRVLLAEGDDSTRHVISALLRKCGYHVSAASDGVKAWELLKEKSFKIDLVLTEVELPSMS 468 +R+LL E D++ ++ L+ GY DG ++ + K DL + +V +P Sbjct: 8 LRILLCEDDENLGMLLREYLQAKGYSAELYPDGEAGFKAFLKN--KYDLCVFDVMMPKKD 65 Query: 469 GFLLLSTIMEHDACKNIPVIMMSSNDAVSMVFKCMLKGAADFLVKPIRKNEL 624 GF L + +A IP+I +++ + + GA D++ KP EL Sbjct: 66 GFTLAQEVRAANA--EIPIIFLTAKTLKEDILEGFKIGADDYITKPFSMEEL 115
>Q9SSE5:COL9_ARATH Zinc finger protein CONSTANS-LIKE 9 - Arabidopsis thaliana (Mouse-ear| cress) Length = 372 Score = 45.8 bits (107), Expect = 8e-04 Identities = 22/50 (44%), Positives = 34/50 (68%) Frame = +1 Query: 1831 HLSQREIALNKFRLKRKERCFEKKVRYQSRKLLAEQRPRVKGQFVRQDQS 1980 H R A+ +++ K+K R F+K+VRY SRK A+ R RVKG+FV+ ++ Sbjct: 311 HSVTRNNAVMRYKEKKKARKFDKRVRYASRKARADVRRRVKGRFVKAGEA 360
>Q5QZQ3:CHEB_IDILO Chemotaxis response regulator protein-glutamate methylesterase -| Idiomarina loihiensis Length = 386 Score = 45.8 bits (107), Expect = 8e-04 Identities = 47/189 (24%), Positives = 86/189 (45%), Gaps = 10/189 (5%) Frame = +1 Query: 283 MPVRVLLAEGDDSTRHVISALLRKCGYH--VSAASDGVKAWELLKEKSFKIDLVLTEVEL 456 M V+VL+ + R ++ +L + +A++G +A E + ++ K D++ ++E+ Sbjct: 1 MTVKVLVVDDSAFFRRRVTEILEDNTNIKVIGSANNGEEAVE--QSRTLKPDVITMDIEM 58 Query: 457 PSMSGFLLLSTIMEHDACKNIPVIMMSS--NDAVSMVFKCMLKGAADFLVKPI------R 612 P M+G + IM + C P++M SS ++ + + GAADFL K R Sbjct: 59 PVMNGIDAVKAIMSSNPC---PILMFSSLTHEGATATLNALEAGAADFLPKKFEDIARNR 115 Query: 613 KNELRNLWQHVWRKQLANGEIDVQQIQQEENVAEQHGRKTEATKAEHSTQNVVRKNRECS 792 ++ L V + VA+Q R +E T A + R N S Sbjct: 116 DEAVKTLQDRVIAIARQPVSRTSARASTPPPVAKQPERSSEPTTALDRIRQ--RNNELQS 173 Query: 793 EQESDAQSS 819 ++ESDA+++ Sbjct: 174 QRESDARTA 182
>Q99U73:ARLR_STAAN Response regulator arlR - Staphylococcus aureus (strain N315)| Length = 214 Score = 45.8 bits (107), Expect = 8e-04 Identities = 41/195 (21%), Positives = 84/195 (43%) Frame = +1 Query: 292 RVLLAEGDDSTRHVISALLRKCGYHVSAASDGVKAWELLKEKSFKIDLVLTEVELPSMSG 471 ++L+ E + + + L Y+V DG + K S DL++ ++ LPS++G Sbjct: 3 QILIVEDEQNLARFLELELTHENYNVDTEYDGQDGLD--KALSHYYDLIILDLMLPSING 60 Query: 472 FLLLSTIMEHDACKNIPVIMMSSNDAVSMVFKCMLKGAADFLVKPIRKNELRNLWQHVWR 651 + I + ++ P+I++++ + GA D++VKP EL + + R Sbjct: 61 LEICRKIRQQ---QSTPIIIITAKSDTYDKVAGLDYGADDYIVKPFDIEELLARIRAILR 117 Query: 652 KQLANGEIDVQQIQQEENVAEQHGRKTEATKAEHSTQNVVRKNRECSEQESDAQSSCTRS 831 +Q IDV + V +G + E TK E+ ++ +N+ Q + Sbjct: 118 RQPQKDIIDVNGTLLKVTV---NGAEIELTKTEYDLLYLLAENKNHVMQREQILNHVWGY 174 Query: 832 EPEAESKHTNSFLEF 876 E E+ + ++ + Sbjct: 175 NSEVETNVVDVYIRY 189
>P51586:YSO1_PLEBO Uncharacterized 14.6 kDa protein in sodA1 3'region - Plectonema| boryanum Length = 131 Score = 45.4 bits (106), Expect = 0.001 Identities = 31/115 (26%), Positives = 57/115 (49%) Frame = +1 Query: 295 VLLAEGDDSTRHVISALLRKCGYHVSAASDGVKAWELLKEKSFKIDLVLTEVELPSMSGF 474 +L+ + D TR ++ +L G V+ A + +A LL+ + K L++++V +P M GF Sbjct: 9 ILVVDDDPDTRDLLRFMLEDEGAIVTVAPNAKEALSLLERELPK--LLVSDVAMPEMDGF 66 Query: 475 LLLSTIMEHDACKNIPVIMMSSNDAVSMVFKCMLKGAADFLVKPIRKNELRNLWQ 639 L+ + E + +P I +++ + G D+L KP+ EL L Q Sbjct: 67 ELIGRVRELPKGETLPAIALTAYAREEDRQAALRSGFNDYLTKPVDPLELIRLVQ 121
>P45337:QSEB_HAEIN Transcriptional regulatory protein qseB - Haemophilus influenzae| Length = 221 Score = 45.4 bits (106), Expect = 0.001 Identities = 39/191 (20%), Positives = 81/191 (42%), Gaps = 4/191 (2%) Frame = +1 Query: 289 VRVLLAEGDDSTRHVISALLRKCGYHVSAASDGVKAWELLKEKSFKIDLVLTEVELPSMS 468 +R+LL E D+ + + L K G+ V +DG L + D V+ ++ LP + Sbjct: 1 MRILLIEDDNLIGNGLQIGLTKLGFAVDWFTDGKTGMAALTSAPY--DAVVLDLTLPKLD 58 Query: 469 GFLLLSTIMEHDACKNIPVIMMSSNDAVSMVFKCMLKGAADFLVKPIRKNELRNLWQHVW 648 G +L + +++PV+++++ D + K + GA D+L KP E+ Q + Sbjct: 59 GLEVLQQWRSNH--QDVPVLILTARDTLDERVKGLQSGADDYLCKPFALAEVAARLQALI 116 Query: 649 RKQLANGEIDVQQ----IQQEENVAEQHGRKTEATKAEHSTQNVVRKNRECSEQESDAQS 816 R++ ++Q + Q + + + T E+ + N++ S + Sbjct: 117 RRRYGYHHSVIEQAGVKLDQNQRSVWLNNQPISLTSREYKLLELFMLNKDRVLSRSSIEE 176 Query: 817 SCTRSEPEAES 849 + + E S Sbjct: 177 KLSSWDEEISS 187
>Q2ILG8:CHEB6_ANADE Chemotaxis response regulator protein-glutamate methylesterase 6 -| Anaeromyxobacter dehalogenans (strain 2CP-C) Length = 350 Score = 45.4 bits (106), Expect = 0.001 Identities = 34/110 (30%), Positives = 59/110 (53%), Gaps = 2/110 (1%) Frame = +1 Query: 289 VRVLLAEGDDSTRHVISALLRKCGYHVSA--ASDGVKAWELLKEKSFKIDLVLTEVELPS 462 +RVL+ + ++R + LL V A A+DG + L + + D+V+ ++++P Sbjct: 10 LRVLVVDDSAASRDELVRLLHGGDGLVVAGTAADGEQG--LAEALRLEPDVVVLDLQMPR 67 Query: 463 MSGFLLLSTIMEHDACKNIPVIMMSSNDAVSMVFKCMLKGAADFLVKPIR 612 M GF L +M A + PV+++SS + VFK + GA DF+ +P R Sbjct: 68 MDGFTFLRLLM---ARRPTPVVVLSSRSRRADVFKALELGALDFVARPER 114
>Q1IQS9:CHEB2_ACIBL Chemotaxis response regulator protein-glutamate methylesterase 2 -| Acidobacteria bacterium (strain Ellin345) Length = 363 Score = 45.4 bits (106), Expect = 0.001 Identities = 34/111 (30%), Positives = 58/111 (52%), Gaps = 4/111 (3%) Frame = +1 Query: 286 PVRVLLAEGDDSTRHVISALLRK--CGYHVSAASDGVKAWELLKEKSFKIDLVLTEVELP 459 P+RVL+ + R +I+ +L+K + A DG A+ L K + + D+V ++E+P Sbjct: 5 PIRVLVVDDSALMRKMITQMLQKDPAIEVIGTAMDG--AFGLKKIEELRPDVVTLDLEMP 62 Query: 460 SMSGFLLLSTIMEHDACKNIPVIMMSSN--DAVSMVFKCMLKGAADFLVKP 606 +M G +L I + PVI++S++ FK + GA DF+ KP Sbjct: 63 NMDGMEMLRHITKRG---QTPVIVVSAHTTQGARETFKALQLGAFDFVAKP 110
>Q0AYL3:CHEB1_SYNWW Chemotaxis response regulator protein-glutamate methylesterase 1 -| Syntrophomonas wolfei subsp. wolfei (strain Goettingen) Length = 352 Score = 45.4 bits (106), Expect = 0.001 Identities = 29/82 (35%), Positives = 44/82 (53%), Gaps = 2/82 (2%) Frame = +1 Query: 367 VSAASDGVKAWELLKEKSFKIDLVLTEVELPSMSGFLLLSTIMEHDACKNIPVIMMS--S 540 V A +G +A E ++E + D+V+ ++E+P + G LS IME A +PVI+ S S Sbjct: 32 VGKAGNGQEALEKIRE--LQPDVVVMDIEMPVLDGLSTLSRIMESQA---LPVIIFSSLS 86 Query: 541 NDAVSMVFKCMLKGAADFLVKP 606 K + GA DF+ KP Sbjct: 87 QKGTEQTLKALQLGAVDFIAKP 108
>Q2FMT2:CHEB1_METHJ Chemotaxis response regulator protein-glutamate methylesterase 1 -| Methanospirillum hungatei (strain JF-1 / DSM 864) Length = 342 Score = 45.4 bits (106), Expect = 0.001 Identities = 25/89 (28%), Positives = 46/89 (51%) Frame = +1 Query: 367 VSAASDGVKAWELLKEKSFKIDLVLTEVELPSMSGFLLLSTIMEHDACKNIPVIMMSSND 546 V ASDG++A + ++E K DL+ ++E+P + G +L E D V+ +++ Sbjct: 30 VGVASDGLEALDKIRE--LKPDLITLDIEMPRLDGLSMLERKKEIDRFPKTLVLSSLTSE 87 Query: 547 AVSMVFKCMLKGAADFLVKPIRKNELRNL 633 M + + GA DF++KP +R + Sbjct: 88 GAEMTKRAIALGADDFMLKPRGIKNIREI 116
>Q49XM7:ARLR_STAS1 Response regulator arlR - Staphylococcus saprophyticus subsp.| saprophyticus (strain ATCC 15305 / DSM 20229) Length = 220 Score = 45.4 bits (106), Expect = 0.001 Identities = 42/197 (21%), Positives = 86/197 (43%), Gaps = 2/197 (1%) Frame = +1 Query: 292 RVLLAEGDDSTRHVISALLRKCGYHVSAASDGVKAWELLKEKSFKIDLVLTEVELPSMSG 471 ++L+ E + + I L Y V DG E K S DL+L ++ LP+++G Sbjct: 3 KILIVEDEQNLARFIELELEHENYDVDIEYDGKPGLE--KALSNTYDLILLDLMLPNING 60 Query: 472 FLLLSTIMEHDACKNIPVIMMSSNDAVSMVFKCMLKGAADFLVKPIRKNELRNLWQHVWR 651 + I ++ + P+I++++ + GA D++VKP EL + + R Sbjct: 61 LEICRQIRQN---QTTPIIIITAKSDTYDKVAGLDYGADDYIVKPFDIEELLARIRAMLR 117 Query: 652 KQLANGEIDVQQIQQEENV--AEQHGRKTEATKAEHSTQNVVRKNRECSEQESDAQSSCT 825 +Q ID++ I +++ G+ + TK E+ ++ +NR Q + Sbjct: 118 RQPQKNLIDIKGIIIDKDAFKVTVDGQPLDLTKTEYDLLFLLVENRNHVLQREQIITDVW 177 Query: 826 RSEPEAESKHTNSFLEF 876 + E E+ + ++ + Sbjct: 178 GYDTEVETNVVDVYIRY 194
>P39048:PATA_ANASP Protein patA - Anabaena sp. (strain PCC 7120)| Length = 379 Score = 45.1 bits (105), Expect = 0.001 Identities = 26/96 (27%), Positives = 52/96 (54%), Gaps = 1/96 (1%) Frame = +1 Query: 361 YHVSAASDGVKAWELLKEKSFKIDLVLTEVELPSMSGFLLLSTIMEHDACKNIPVIMMSS 540 + V +D +KA L++ K D++L V++P + G+ L S + +H KN PVIM++ Sbjct: 285 FAVIGVTDSLKA--LMEILCTKPDIILINVDMPDLDGYELCSLLRKHSYFKNTPVIMVTE 342 Query: 541 NDAVSMVFKCMLKGAADFLVKPIRKNE-LRNLWQHV 645 + + + A+ L KP + + L+ +++H+ Sbjct: 343 KAGLVDRARAKIVRASGHLTKPFNQGDLLKVIFKHI 378
>Q4UL27:NTRXL_RICFE Putative response regulator ntrX-like - Rickettsia felis| (Rickettsia azadi) Length = 475 Score = 45.1 bits (105), Expect = 0.001 Identities = 27/115 (23%), Positives = 60/115 (52%) Frame = +1 Query: 280 MMPVRVLLAEGDDSTRHVISALLRKCGYHVSAASDGVKAWELLKEKSFKIDLVLTEVELP 459 M + VL+ + ++S R++I+A L+ G++ A++ +A ++L EK ++ ++ Sbjct: 1 MSQLDVLIVDDEESIRNLIAANLKDEGFNPKVAANSTQALKILSEKPVSAVILDIWLQGS 60 Query: 460 SMSGFLLLSTIMEHDACKNIPVIMMSSNDAVSMVFKCMLKGAADFLVKPIRKNEL 624 + G +L I + +PVI++S + + + GA D++ KP ++L Sbjct: 61 EIDGLGILEIIKKRYPL--MPVIIISGHGTIETAVNAIKMGAYDYIEKPFNNDKL 113
>O22800:COL14_ARATH Zinc finger protein CONSTANS-LIKE 14 - Arabidopsis thaliana| (Mouse-ear cress) Length = 402 Score = 45.1 bits (105), Expect = 0.001 Identities = 22/57 (38%), Positives = 37/57 (64%) Frame = +1 Query: 1798 ATENPSMEGLHHLSQREIALNKFRLKRKERCFEKKVRYQSRKLLAEQRPRVKGQFVR 1968 A N +E + R+ A+ +++ K+K R ++K +RY++RK AE R RVKG+FV+ Sbjct: 344 AVTNADLEQM--AQNRDNAMQRYKEKKKTRRYDKTIRYETRKARAETRLRVKGRFVK 398
>Q57QC3:PHOP_SALCH Virulence transcriptional regulatory protein phoP - Salmonella| choleraesuis Length = 224 Score = 44.7 bits (104), Expect = 0.002 Identities = 34/137 (24%), Positives = 64/137 (46%), Gaps = 2/137 (1%) Frame = +1 Query: 289 VRVLLAEGDDSTRHVISALLRKCGYHVSAASDGVKAWELLKEKSFKIDLVLTEVELPSMS 468 +RVL+ E + RH + L+ G+ V A D +A L E D+ + ++ LP Sbjct: 2 MRVLVVEDNALLRHHLKVQLQDSGHQVDATEDAREADYYLNE--HLPDIAIVDLGLPDED 59 Query: 469 GFLLLSTIMEHDACKNIPVIMMSSNDAVSMVFKCMLKGAADFLVKPIRKNELRNLWQHVW 648 G L+ D ++PV+++++ + + + GA D++ KP E+ Q + Sbjct: 60 GLSLIRRWRSSDI--SLPVLVLTAREGWQDKVEVLSSGADDYVTKPFHIEEVMARMQALM 117 Query: 649 RKQ--LANGEIDVQQIQ 693 R+ LA+ I++ Q Sbjct: 118 RRNSGLASQVINIPPFQ 134
>Q68WH4:NTRXL_RICTY Putative response regulator ntrX-like - Rickettsia typhi| Length = 475 Score = 44.7 bits (104), Expect = 0.002 Identities = 27/115 (23%), Positives = 60/115 (52%) Frame = +1 Query: 280 MMPVRVLLAEGDDSTRHVISALLRKCGYHVSAASDGVKAWELLKEKSFKIDLVLTEVELP 459 M + VL+ + ++S R++I+A L+ G++ A++ +A +++ EK ++ ++ Sbjct: 1 MSQLDVLILDDEESIRNLIAANLKDEGFNPKVAANSTQALKIISEKPVSAVILDIWLQGS 60 Query: 460 SMSGFLLLSTIMEHDACKNIPVIMMSSNDAVSMVFKCMLKGAADFLVKPIRKNEL 624 + G +L I + IPVI++S + + + GA D++ KP ++L Sbjct: 61 EIDGLGVLEIIKKRYPL--IPVIIISGHGTIETAVNAIKMGAYDYIEKPFNNDKL 113
>Q92HC2:NTRXL_RICCN Putative response regulator ntrX-like - Rickettsia conorii| Length = 474 Score = 44.7 bits (104), Expect = 0.002 Identities = 27/115 (23%), Positives = 60/115 (52%) Frame = +1 Query: 280 MMPVRVLLAEGDDSTRHVISALLRKCGYHVSAASDGVKAWELLKEKSFKIDLVLTEVELP 459 M + VL+ + ++S R++I+A L+ G++ A++ +A ++L EK ++ ++ Sbjct: 1 MSQLDVLIVDDEESIRNLIAANLKDEGFNPKVAANSTQALKILSEKPVSAVVLDIWLQGS 60 Query: 460 SMSGFLLLSTIMEHDACKNIPVIMMSSNDAVSMVFKCMLKGAADFLVKPIRKNEL 624 + G +L I + +PVI++S + + + GA D++ KP ++L Sbjct: 61 EIDGLGILEIIKKRYPL--MPVIIISGHGTIETAVNAIKMGAYDYIEKPFNNDKL 113
>Q9C7E8:COL15_ARATH Zinc finger protein CONSTANS-LIKE 15 - Arabidopsis thaliana| (Mouse-ear cress) Length = 433 Score = 44.7 bits (104), Expect = 0.002 Identities = 22/53 (41%), Positives = 37/53 (69%), Gaps = 1/53 (1%) Frame = +1 Query: 1825 LHHLSQ-REIALNKFRLKRKERCFEKKVRYQSRKLLAEQRPRVKGQFVRQDQS 1980 L L+Q R A+ +++ KRK R ++K +RY+SRK A+ R RV+G+FV+ ++ Sbjct: 378 LERLAQNRGDAMQRYKEKRKTRRYDKTIRYESRKARADTRLRVRGRFVKASEA 430
>P39663:SPHR_SYNP7 Alkaline phosphatase synthesis transcriptional regulatory protein| sphR - Synechococcus sp. (strain PCC 7942) (Anacystis nidulans R2) Length = 257 Score = 44.3 bits (103), Expect = 0.002 Identities = 30/118 (25%), Positives = 58/118 (49%), Gaps = 7/118 (5%) Frame = +1 Query: 292 RVLLAEGDDSTRHVISALLRKCGYHVSAASDGVKAWELLKEKSFKI-------DLVLTEV 450 R+L+ E + R +++ +L++ G+ V A+DG A + S + DLV+ ++ Sbjct: 25 RILVVEDEAVIRDMVALVLQQEGFTVDVAADGRTALNYFRSDSPEAGSVTENPDLVVLDL 84 Query: 451 ELPSMSGFLLLSTIMEHDACKNIPVIMMSSNDAVSMVFKCMLKGAADFLVKPIRKNEL 624 LP+++G + +P++M+S+ D + + GA D+L KP EL Sbjct: 85 MLPAVNGLDFCRLLRRQGV--TVPILMLSAKDTETDRVVGLEIGADDYLTKPFGTREL 140
>P45607:PHOB_SHIFL Phosphate regulon transcriptional regulatory protein phoB -| Shigella flexneri Length = 229 Score = 44.3 bits (103), Expect = 0.002 Identities = 30/114 (26%), Positives = 52/114 (45%) Frame = +1 Query: 283 MPVRVLLAEGDDSTRHVISALLRKCGYHVSAASDGVKAWELLKEKSFKIDLVLTEVELPS 462 M R+L+ E + R ++ +L + G+ A D A L E DL+L + LP Sbjct: 1 MARRILVVEDEAPIREMVCFVLEQNGFQPVEAEDYDSAVNQLNEPW--PDLILLDWMLPG 58 Query: 463 MSGFLLLSTIMEHDACKNIPVIMMSSNDAVSMVFKCMLKGAADFLVKPIRKNEL 624 SG + + ++IPV+M+++ + + GA D++ KP EL Sbjct: 59 GSGIQFIKHLKRESMTRDIPVVMLTARGEEEDRVRGLETGADDYITKPFSPKEL 112
>P45606:PHOB_SHIDY Phosphate regulon transcriptional regulatory protein phoB -| Shigella dysenteriae Length = 229 Score = 44.3 bits (103), Expect = 0.002 Identities = 30/114 (26%), Positives = 52/114 (45%) Frame = +1 Query: 283 MPVRVLLAEGDDSTRHVISALLRKCGYHVSAASDGVKAWELLKEKSFKIDLVLTEVELPS 462 M R+L+ E + R ++ +L + G+ A D A L E DL+L + LP Sbjct: 1 MARRILVVEDEAPIREMVCFVLEQNGFQPVEAEDYDSAVNQLNEPW--PDLILLDWMLPG 58 Query: 463 MSGFLLLSTIMEHDACKNIPVIMMSSNDAVSMVFKCMLKGAADFLVKPIRKNEL 624 SG + + ++IPV+M+++ + + GA D++ KP EL Sbjct: 59 GSGIQFIKHLKRESMTRDIPVVMLTARGEEEDRVRGLETGADDYITKPFSPKEL 112
>P0AFJ5:PHOB_ECOLI Phosphate regulon transcriptional regulatory protein phoB -| Escherichia coli Length = 229 Score = 44.3 bits (103), Expect = 0.002 Identities = 30/114 (26%), Positives = 52/114 (45%) Frame = +1 Query: 283 MPVRVLLAEGDDSTRHVISALLRKCGYHVSAASDGVKAWELLKEKSFKIDLVLTEVELPS 462 M R+L+ E + R ++ +L + G+ A D A L E DL+L + LP Sbjct: 1 MARRILVVEDEAPIREMVCFVLEQNGFQPVEAEDYDSAVNQLNEPW--PDLILLDWMLPG 58 Query: 463 MSGFLLLSTIMEHDACKNIPVIMMSSNDAVSMVFKCMLKGAADFLVKPIRKNEL 624 SG + + ++IPV+M+++ + + GA D++ KP EL Sbjct: 59 GSGIQFIKHLKRESMTRDIPVVMLTARGEEEDRVRGLETGADDYITKPFSPKEL 112
>P0AFJ6:PHOB_ECO57 Phosphate regulon transcriptional regulatory protein phoB -| Escherichia coli O157:H7 Length = 229 Score = 44.3 bits (103), Expect = 0.002 Identities = 30/114 (26%), Positives = 52/114 (45%) Frame = +1 Query: 283 MPVRVLLAEGDDSTRHVISALLRKCGYHVSAASDGVKAWELLKEKSFKIDLVLTEVELPS 462 M R+L+ E + R ++ +L + G+ A D A L E DL+L + LP Sbjct: 1 MARRILVVEDEAPIREMVCFVLEQNGFQPVEAEDYDSAVNQLNEPW--PDLILLDWMLPG 58 Query: 463 MSGFLLLSTIMEHDACKNIPVIMMSSNDAVSMVFKCMLKGAADFLVKPIRKNEL 624 SG + + ++IPV+M+++ + + GA D++ KP EL Sbjct: 59 GSGIQFIKHLKRESMTRDIPVVMLTARGEEEDRVRGLETGADDYITKPFSPKEL 112
>P03029:NTRC_KLEPN Nitrogen assimilation regulatory protein - Klebsiella pneumoniae| Length = 469 Score = 44.3 bits (103), Expect = 0.002 Identities = 28/107 (26%), Positives = 51/107 (47%) Frame = +1 Query: 301 LAEGDDSTRHVISALLRKCGYHVSAASDGVKAWELLKEKSFKIDLVLTEVELPSMSGFLL 480 + + D S R V+ L G + G + + L K+ D++L+++ +P M G L Sbjct: 8 IVDDDSSIRWVLERALTGAGLSCTTFESGNEVLDALTTKT--PDVLLSDIRMPGMDGLAL 65 Query: 481 LSTIMEHDACKNIPVIMMSSNDAVSMVFKCMLKGAADFLVKPIRKNE 621 L I + +PVI+M+++ + +GA D+L KP +E Sbjct: 66 LKQIKQRHPM--LPVIIMTAHSDLDAAVSAYQQGAFDYLPKPFDIDE 110
>P15940:NODW_BRAJA Nodulation protein W - Bradyrhizobium japonicum| Length = 227 Score = 44.3 bits (103), Expect = 0.002 Identities = 34/111 (30%), Positives = 52/111 (46%), Gaps = 1/111 (0%) Frame = +1 Query: 295 VLLAEGDDSTRHVISALLRKCGYHVSAASDGVKAWELLKEKSFKIDLVLT-EVELPSMSG 471 V + E D S R ++ L R G V A A E+L+ + L +V LP +SG Sbjct: 22 VFVVEDDISMRRSLTNLFRSVGLEVVAFGS---AREMLQSTMPDVTSCLVLDVRLPGLSG 78 Query: 472 FLLLSTIMEHDACKNIPVIMMSSNDAVSMVFKCMLKGAADFLVKPIRKNEL 624 + + + +IP+I ++ + + M + M GA DFL KP R EL Sbjct: 79 LDYQTELARLNI--HIPIIFITGHGDIPMTVRAMKGGAVDFLSKPFRDQEL 127
>O23379:COL11_ARATH Putative zinc finger protein CONSTANS-LIKE 11 - Arabidopsis thaliana| (Mouse-ear cress) Length = 330 Score = 44.3 bits (103), Expect = 0.002 Identities = 19/48 (39%), Positives = 33/48 (68%) Frame = +1 Query: 1843 REIALNKFRLKRKERCFEKKVRYQSRKLLAEQRPRVKGQFVRQDQSVQ 1986 R+ A +++ K+ +R F K++RY SRK A+ R RVKG+FV+ ++ + Sbjct: 276 RDEAKKRYKQKKSKRMFGKQIRYASRKARADTRKRVKGRFVKSGETFE 323
>Q1D359:CHEB1_MYXXD Chemotaxis response regulator protein-glutamate methylesterase 1 -| Myxococcus xanthus (strain DK 1622) Length = 345 Score = 44.3 bits (103), Expect = 0.002 Identities = 34/108 (31%), Positives = 52/108 (48%), Gaps = 2/108 (1%) Frame = +1 Query: 289 VRVLLAEGDDSTRHVISALLRKCG--YHVSAASDGVKAWELLKEKSFKIDLVLTEVELPS 462 + VL+ + R +S +L V A+DG + L K K D+V ++E+P Sbjct: 7 ISVLVIDDSAHNRRTLSTMLESEPDVRVVDRAADGEEG--LKKVVDLKPDVVTLDLEMPK 64 Query: 463 MSGFLLLSTIMEHDACKNIPVIMMSSNDAVSMVFKCMLKGAADFLVKP 606 + G+ L +M PVI++SS S VFK + GA DF+ KP Sbjct: 65 LGGYTFLRLLMR---TAPTPVIVISSYSHRSDVFKALELGAFDFIAKP 109
>Q5HPC3:ARLR_STAEQ Response regulator arlR - Staphylococcus epidermidis (strain ATCC| 35984 / RP62A) Length = 219 Score = 44.3 bits (103), Expect = 0.002 Identities = 41/196 (20%), Positives = 81/196 (41%), Gaps = 2/196 (1%) Frame = +1 Query: 295 VLLAEGDDSTRHVISALLRKCGYHVSAASDGVKAWELLKEKSFKIDLVLTEVELPSMSGF 474 +L+ E + + I L Y V +DG + K + DL + ++ LP+++G Sbjct: 4 ILIVEDEQNLARFIELELTHENYTVDIENDGKAGLDKALSKPY--DLYILDLMLPNINGL 61 Query: 475 LLLSTIMEHDACKNIPVIMMSSNDAVSMVFKCMLKGAADFLVKPIRKNELRNLWQHVWRK 654 + I + P+I++++ + GA D++VKP EL + V R+ Sbjct: 62 EICRQIRQKTTT---PIIIITAKSETYDKVAGLDYGADDYIVKPFDIEELLARIRAVLRR 118 Query: 655 QLANGEIDVQQIQQEENV--AEQHGRKTEATKAEHSTQNVVRKNRECSEQESDAQSSCTR 828 Q +D+ I +++ +G + E TK E+ V+ +NR Q Sbjct: 119 QPDKDVLDINGIIIDKDAFKVTVNGHQLELTKTEYDLLYVLAENRNHVMQREQILDHVWG 178 Query: 829 SEPEAESKHTNSFLEF 876 E E+ + ++ + Sbjct: 179 YNSEVETNVVDVYIRY 194
>P66795:QSEB_SALTY Transcriptional regulatory protein qseB - Salmonella typhimurium| Length = 219 Score = 43.9 bits (102), Expect = 0.003 Identities = 33/106 (31%), Positives = 53/106 (50%) Frame = +1 Query: 289 VRVLLAEGDDSTRHVISALLRKCGYHVSAASDGVKAWELLKEKSFKIDLVLTEVELPSMS 468 +R+LL E D I A L K G+ V ++G E L + D V+ ++ LP M Sbjct: 1 MRILLVEDDTLIGDGIKAGLSKMGFSVDWFTEGRPGKEALYSAPY--DAVILDLTLPGMD 58 Query: 469 GFLLLSTIMEHDACKNIPVIMMSSNDAVSMVFKCMLKGAADFLVKP 606 G +L E K PV+++++ DA++ + + GA D+L KP Sbjct: 59 GRDILREWREKG--KQEPVLILTARDALAERVEGLRLGADDYLCKP 102
>P66796:QSEB_SALTI Transcriptional regulatory protein qseB - Salmonella typhi| Length = 219 Score = 43.9 bits (102), Expect = 0.003 Identities = 33/106 (31%), Positives = 53/106 (50%) Frame = +1 Query: 289 VRVLLAEGDDSTRHVISALLRKCGYHVSAASDGVKAWELLKEKSFKIDLVLTEVELPSMS 468 +R+LL E D I A L K G+ V ++G E L + D V+ ++ LP M Sbjct: 1 MRILLVEDDTLIGDGIKAGLSKMGFSVDWFTEGRPGKEALYSAPY--DAVILDLTLPGMD 58 Query: 469 GFLLLSTIMEHDACKNIPVIMMSSNDAVSMVFKCMLKGAADFLVKP 606 G +L E K PV+++++ DA++ + + GA D+L KP Sbjct: 59 GRDILREWREKG--KQEPVLILTARDALAERVEGLRLGADDYLCKP 102
>P45605:PHOB_KLEPN Phosphate regulon transcriptional regulatory protein phoB -| Klebsiella pneumoniae Length = 229 Score = 43.9 bits (102), Expect = 0.003 Identities = 30/114 (26%), Positives = 52/114 (45%) Frame = +1 Query: 283 MPVRVLLAEGDDSTRHVISALLRKCGYHVSAASDGVKAWELLKEKSFKIDLVLTEVELPS 462 M R+L+ E + R ++ +L + G+ A D A L E DL+L + LP Sbjct: 1 MARRILVVEDEAPIREMVCFVLEQNGFQPVEAEDYDSAVNQLNEPW--PDLILLDWMLPG 58 Query: 463 MSGFLLLSTIMEHDACKNIPVIMMSSNDAVSMVFKCMLKGAADFLVKPIRKNEL 624 SG + + ++IPV+M+++ + + GA D++ KP EL Sbjct: 59 GSGLQFIKLLKREAMTRDIPVVMLTARGEEEDRVRGLETGADDYITKPFSPKEL 112
>P26487:FIXJ_AZOCA Transcriptional regulatory protein fixJ - Azorhizobium caulinodans| Length = 211 Score = 43.9 bits (102), Expect = 0.003 Identities = 35/114 (30%), Positives = 57/114 (50%), Gaps = 6/114 (5%) Frame = +1 Query: 283 MPVRVLLAEGDDSTRHVISALLRKCGY----HVSAASDGVKAWELLKEKSFKID--LVLT 444 +PV V+ + DD+ R ++ LL G H SAA+ + +D ++T Sbjct: 5 LPVHVI--DDDDAVRESLAFLLESSGLAVTQHTSAAA--------FLDAGVPLDRGCIVT 54 Query: 445 EVELPSMSGFLLLSTIMEHDACKNIPVIMMSSNDAVSMVFKCMLKGAADFLVKP 606 +V +P +SG LL + A ++ VI+M+ + V + + M GAADFL KP Sbjct: 55 DVRMPGISGLELLKELNARGA--HMAVIVMTGHGDVPLAVEAMKLGAADFLEKP 106
>P13632:DCTD_RHIME C4-dicarboxylate transport transcriptional regulatory protein dctD| - Rhizobium meliloti (Sinorhizobium meliloti) Length = 460 Score = 43.9 bits (102), Expect = 0.003 Identities = 28/110 (25%), Positives = 52/110 (47%) Frame = +1 Query: 295 VLLAEGDDSTRHVISALLRKCGYHVSAASDGVKAWELLKEKSFKIDLVLTEVELPSMSGF 474 V L + D R + L G+ VS+ + +A L I V++++ +P M G Sbjct: 7 VFLIDDDRDLRKAMQQTLELAGFTVSSFASATEALAGLSADFAGI--VISDIRMPGMDGL 64 Query: 475 LLLSTIMEHDACKNIPVIMMSSNDAVSMVFKCMLKGAADFLVKPIRKNEL 624 L I+ D ++P+I+++ + + M + + GA DF+ KP + L Sbjct: 65 ALFRKILALDP--DLPMILVTGHGDIPMAVQAIQDGAYDFIAKPFAADRL 112
>O58192:CHEB_PYRHO Chemotaxis response regulator protein-glutamate methylesterase -| Pyrococcus horikoshii Length = 368 Score = 43.9 bits (102), Expect = 0.003 Identities = 36/121 (29%), Positives = 62/121 (51%), Gaps = 10/121 (8%) Frame = +1 Query: 274 LPMMPVRVLLAEGDDST--RHVISALLRK------CGYHVSAASDGVKAWELLKEKSFKI 429 +P+M ++ + DDS R V+ ++ CG A DG++A E++++ + Sbjct: 1 MPLMGRKIKVLVVDDSAFMRKVLKDIINSDPELEVCG----EARDGIEAIEMVQK--CRP 54 Query: 430 DLVLTEVELPSMSGFLLLSTIMEHDACKNIPVIMMS--SNDAVSMVFKCMLKGAADFLVK 603 D+V +VE+P M+G L IM+ +PVIM+S + + K + GA DF+ K Sbjct: 55 DVVTLDVEMPRMNGLDALRVIMKR---YPVPVIMISALTQEGADATIKALEYGAIDFIPK 111 Query: 604 P 606 P Sbjct: 112 P 112
>Q9UYF3:CHEB_PYRAB Chemotaxis response regulator protein-glutamate methylesterase -| Pyrococcus abyssi Length = 368 Score = 43.9 bits (102), Expect = 0.003 Identities = 34/114 (29%), Positives = 58/114 (50%), Gaps = 8/114 (7%) Frame = +1 Query: 289 VRVLLAEGDDSTRHVISALLRK------CGYHVSAASDGVKAWELLKEKSFKIDLVLTEV 450 +RVL+ + R V+ ++ CG A DG++A E++++ + D+V +V Sbjct: 8 IRVLVVDDSAFMRKVLKDIINSDPELEVCG----EARDGIEAIEMVQK--CRPDVVTLDV 61 Query: 451 ELPSMSGFLLLSTIMEHDACKNIPVIMMS--SNDAVSMVFKCMLKGAADFLVKP 606 E+P M+G L IM+ +PVIM+S + + K + GA DF+ KP Sbjct: 62 EMPRMNGLDALRVIMKK---YPVPVIMISALTQEGAEATIKALEYGAIDFIPKP 112
>Q8CP82:ARLR_STAES Response regulator arlR - Staphylococcus epidermidis (strain ATCC| 12228) Length = 219 Score = 43.9 bits (102), Expect = 0.003 Identities = 41/196 (20%), Positives = 81/196 (41%), Gaps = 2/196 (1%) Frame = +1 Query: 295 VLLAEGDDSTRHVISALLRKCGYHVSAASDGVKAWELLKEKSFKIDLVLTEVELPSMSGF 474 +L+ E + + I L Y V +DG + K + DL + ++ LP+++G Sbjct: 4 ILIVEDEQNLARFIELELTHENYTVDIENDGKVGLDKALSKPY--DLYILDLMLPNINGL 61 Query: 475 LLLSTIMEHDACKNIPVIMMSSNDAVSMVFKCMLKGAADFLVKPIRKNELRNLWQHVWRK 654 + I + P+I++++ + GA D++VKP EL + V R+ Sbjct: 62 EICRQIRQKTTT---PIIIITAKSETYDKVAGLDYGADDYIVKPFDIEELLARIRAVLRR 118 Query: 655 QLANGEIDVQQIQQEENV--AEQHGRKTEATKAEHSTQNVVRKNRECSEQESDAQSSCTR 828 Q +D+ I +++ +G + E TK E+ V+ +NR Q Sbjct: 119 QPDKDVLDINGIIIDKDAFKVTVNGHQLELTKTEYDLLYVLAENRNHVMQREQILDHVWG 178 Query: 829 SEPEAESKHTNSFLEF 876 E E+ + ++ + Sbjct: 179 YNSEVETNVVDVYIRY 194
>Q9P896:TCSA_EMENI Two-component system protein A - Emericella nidulans (Aspergillus| nidulans) Length = 719 Score = 43.5 bits (101), Expect = 0.004 Identities = 30/118 (25%), Positives = 60/118 (50%), Gaps = 3/118 (2%) Frame = +1 Query: 295 VLLAEGD--DSTRHVISALLRKCGYHVSAASDGVKAWELLKEKSFKIDLVLTEVELPSMS 468 VLL E + + TR+V + + + A +G +A ++++K D++L +V +P + Sbjct: 561 VLLVEDNIVNHTRYVEAPTYQFGFQRIDGAWNGAEAVRMVRQKPLSYDIILMDVSMPVLD 620 Query: 469 GFLLLSTIMEHDACKNIPVIMMSSNDAVSMVFKCMLKGAADFLVKPIRKNE-LRNLWQ 639 G L +T D +P+I ++ N + +G D + KP+ +++ LR LW+ Sbjct: 621 G--LAATEQIRDMGLTMPIIAITGNAMKGDAETYIAQGMDDCICKPVHRDQLLRVLWK 676
>Q4UU85:RPFG_XANC8 Response regulator rpfG - Xanthomonas campestris pv. campestris| (strain 8004) Length = 378 Score = 43.5 bits (101), Expect = 0.004 Identities = 38/150 (25%), Positives = 66/150 (44%) Frame = +1 Query: 424 KIDLVLTEVELPSMSGFLLLSTIMEHDACKNIPVIMMSSNDAVSMVFKCMLKGAADFLVK 603 ++DL+L + +P M G + + ++IP+I+++ + + G DFLVK Sbjct: 73 RVDLLLLDYRMPGMDGLEFARRLRRLPSHRDIPIILITIVGDEPIRQAALEAGVIDFLVK 132 Query: 604 PIRKNELRNLWQHVWRKQLANGEIDVQQIQQEENVAEQHGRKTEATKAEHSTQNVVRKNR 783 PIR ELR ++ +Q QQ E+V + +A Q ++ Sbjct: 133 PIRPRELRARCSNL-----------LQLRQQSESVKQ---------RALSLEQRLLASMN 172 Query: 784 ECSEQESDAQSSCTRSEPEAESKHTNSFLE 873 E E+E + S R+ E T++FLE Sbjct: 173 EVEERERETLSRLARA-IEYRDGGTSAFLE 201
>Q83RR0:PHOP_SHIFL Virulence transcriptional regulatory protein phoP - Shigella| flexneri Length = 223 Score = 43.5 bits (101), Expect = 0.004 Identities = 28/122 (22%), Positives = 59/122 (48%) Frame = +1 Query: 289 VRVLLAEGDDSTRHVISALLRKCGYHVSAASDGVKAWELLKEKSFKIDLVLTEVELPSMS 468 +RVL+ E + RH + ++ G+ V A D +A L E D+ + ++ LP Sbjct: 1 MRVLVVEDNALLRHHLKVQIQDAGHQVDDAEDAKEADYYLNE--HLPDIAIVDLGLPDED 58 Query: 469 GFLLLSTIMEHDACKNIPVIMMSSNDAVSMVFKCMLKGAADFLVKPIRKNELRNLWQHVW 648 G L+ +D ++P++++++ ++ + + GA D++ KP E+ Q + Sbjct: 59 GLSLIRRWRSNDV--SLPILVLTARESWQDKVEVLSAGADDYVTKPFHIEEVMARMQALM 116 Query: 649 RK 654 R+ Sbjct: 117 RR 118 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.131 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 434,349,038 Number of extensions: 9793340 Number of successful extensions: 30870 Number of sequences better than 10.0: 460 Number of HSP's gapped: 30563 Number of HSP's successfully gapped: 471 Length of query: 822 Length of database: 100,686,439 Length adjustment: 122 Effective length of query: 700 Effective length of database: 67,222,449 Effective search space: 47055714300 Effective search space used: 47055714300 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
