ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf139l20
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1Q85FL7:NDHJ_ADICA NAD(P)H-quinone oxidoreductase chain J, chloro... 30 5.4
2Q9MUR1:NDHJ_MESVI NAD(P)H-quinone oxidoreductase chain J, chloro... 30 7.1
3P32895:KPR1_YEAST Ribose-phosphate pyrophosphokinase 1 - Sacchar... 30 7.1

>Q85FL7:NDHJ_ADICA NAD(P)H-quinone oxidoreductase chain J, chloroplast - Adiantum|
           capillus-veneris (Maidenhair fern)
          Length = 170
 Score = 30.4 bits (67), Expect = 5.4
 Identities = 17/69 (24%), Positives = 29/69 (42%)
 Frame = +3

Query: 96  FGYLSTMALGNDSPASYIRMVHHLIEKCMTFGMSMEECMEALSKRADVQPVVTSTVWKEL 275
           F YL +    + +P   +  V+HL +         E C++    R + Q      VWK  
Sbjct: 60  FNYLRSQCAYDATPGGSLVSVYHLTQMQDQSDQPEEICVKVFVSRTNPQIPSVYWVWKSA 119

Query: 276 EKENKEFFD 302
           E + +E +D
Sbjct: 120 EFQERESYD 128



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>Q9MUR1:NDHJ_MESVI NAD(P)H-quinone oxidoreductase chain J, chloroplast - Mesostigma|
           viride
          Length = 174

 Score = 30.0 bits (66), Expect = 7.1
 Identities = 17/73 (23%), Positives = 33/73 (45%), Gaps = 2/73 (2%)
 Frame = +3

Query: 96  FGYLSTMALGNDSPASYIRMVHHLIEKCMTFGMSMEECMEALSKRADVQPVVTST--VWK 269
           F YL +    + SP   +  V+HL +         E C++    R   +P++ S   +WK
Sbjct: 64  FNYLRSQCAYDVSPGGDLASVYHLTKVDDNADQPQEVCIKVFVPR--TKPIIPSVFWIWK 121

Query: 270 ELEKENKEFFDRY 308
             + + +E +D +
Sbjct: 122 TADFQERESYDMF 134



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>P32895:KPR1_YEAST Ribose-phosphate pyrophosphokinase 1 - Saccharomyces cerevisiae|
           (Baker's yeast)
          Length = 427

 Score = 30.0 bits (66), Expect = 7.1
 Identities = 14/54 (25%), Positives = 24/54 (44%), Gaps = 8/54 (14%)
 Frame = +3

Query: 129 DSPASYIRMVHHLIEKC--------MTFGMSMEECMEALSKRADVQPVVTSTVW 266
           D P S+I    HL++ C         T G+   +C+E L K   +  +V +  +
Sbjct: 329 DRPGSFISAAEHLVQNCGAKKVYVVATHGIFTGDCLEELEKSDAIDTIVVTNTY 382


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 99,513,307
Number of extensions: 2011981
Number of successful extensions: 5632
Number of sequences better than 10.0: 3
Number of HSP's gapped: 5632
Number of HSP's successfully gapped: 3
Length of query: 206
Length of database: 100,686,439
Length adjustment: 108
Effective length of query: 98
Effective length of database: 71,062,579
Effective search space: 6964132742
Effective search space used: 6964132742
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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