| Clone Name | FLbaf137d19 |
|---|---|
| Clone Library Name | barley_pub |
>O46503:ST1C1_RABIT Sulfotransferase 1C1 - Oryctolagus cuniculus (Rabbit)| Length = 296 Score = 32.3 bits (72), Expect = 1.1 Identities = 10/29 (34%), Positives = 23/29 (79%) Frame = +3 Query: 432 SKCKFVYVWRLL*DCVLCHFYYEKSNEVI 518 + CKF+YV R + DC++ ++++++ N+V+ Sbjct: 122 NNCKFLYVARNVKDCMVSYYHFQRMNQVL 150
>O69407:GRDH_EUBAC Betaine reductase complex component B subunit beta - Eubacterium| acidaminophilum Length = 437 Score = 32.3 bits (72), Expect = 1.1 Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 3/50 (6%) Frame = +2 Query: 2 GGQPGVRLRRDG---VEICRRPLAGDPARPAPPRCFLPRGPLHEELQDDG 142 GG R+R+D ++ + +AG+ PA F PRG H+ ++DG Sbjct: 134 GGNNAGRMRQDMSAMAKVANKIIAGEKIGPADEEGFFPRGKRHQHWREDG 183
>O00338:ST1C1_HUMAN Sulfotransferase 1C1 - Homo sapiens (Human)| Length = 296 Score = 29.6 bits (65), Expect(2) = 2.2 Identities = 9/29 (31%), Positives = 21/29 (72%) Frame = +3 Query: 432 SKCKFVYVWRLL*DCVLCHFYYEKSNEVI 518 + CKF+YV R DC++ ++++++ N ++ Sbjct: 122 NNCKFLYVARNAKDCMVSYYHFQRMNHML 150 Score = 20.4 bits (41), Expect(2) = 2.2 Identities = 8/21 (38%), Positives = 12/21 (57%) Frame = +2 Query: 257 LPWFRPKRPSHSQGARDMIMP 319 + W RP +PS + A+ M P Sbjct: 83 IEWARPPQPSGVEKAKAMPSP 103
>Q9P1Y6:K1542_HUMAN RING and PHD-finger domain-containing protein KIAA1542 - Homo| sapiens (Human) Length = 1649 Score = 31.2 bits (69), Expect = 2.3 Identities = 15/41 (36%), Positives = 21/41 (51%) Frame = +2 Query: 29 RDGVEICRRPLAGDPARPAPPRCFLPRGPLHEELQDDGGGG 151 RD CR + G P +PAP R + P +++ D GGG Sbjct: 652 RDSKPPCRSVVPGPPLKPAPRRTDISELPRIPKIRRDDGGG 692
>Q9D939:ST1C2_MOUSE Sulfotransferase 1C2 - Mus musculus (Mouse)| Length = 296 Score = 29.3 bits (64), Expect(2) = 2.8 Identities = 10/31 (32%), Positives = 22/31 (70%) Frame = +3 Query: 432 SKCKFVYVWRLL*DCVLCHFYYEKSNEVIRE 524 + CKF+YV R DC++ ++++ + ++V+ E Sbjct: 122 NNCKFLYVARNAKDCMVSYYHFYRMSQVLPE 152 Score = 20.4 bits (41), Expect(2) = 2.8 Identities = 8/21 (38%), Positives = 11/21 (52%) Frame = +2 Query: 257 LPWFRPKRPSHSQGARDMIMP 319 + W RP +PS A +M P Sbjct: 83 IEWARPPQPSGVDKANEMPAP 103
>P18834:COL14_CAEEL Cuticle collagen 14 - Caenorhabditis elegans| Length = 345 Score = 30.8 bits (68), Expect = 3.1 Identities = 16/34 (47%), Positives = 18/34 (52%) Frame = +2 Query: 62 AGDPARPAPPRCFLPRGPLHEELQDDGGGGSGVP 163 AG P RP PP P GP E + G G SG+P Sbjct: 273 AGAPGRPGPPGQPGPAGPPGENGKGGGQGPSGLP 306
>P98157:LRP1_CHICK Low-density lipoprotein receptor-related protein 1 precursor - Gallus| gallus (Chicken) Length = 4543 Score = 30.8 bits (68), Expect = 3.1 Identities = 15/43 (34%), Positives = 23/43 (53%) Frame = -1 Query: 321 HGMIMSRAPWECDGRLGLNQGSRLSAEPSFRTSPPQSRCCPSY 193 +G +S + WECDG + S A + R S P+S+C S+ Sbjct: 2865 NGRCLSNSQWECDGEFDCHDHSD-EAPKNPRCSSPESKCNDSF 2906
>O12972:RFNG_CHICK Beta-1,3-N-acetylglucosaminyltransferase radical fringe - Gallus| gallus (Chicken) Length = 372 Score = 30.4 bits (67), Expect = 4.0 Identities = 16/36 (44%), Positives = 20/36 (55%) Frame = +2 Query: 50 RRPLAGDPARPAPPRCFLPRGPLHEELQDDGGGGSG 157 RRP P+RP+P R P G ++ D GGGSG Sbjct: 38 RRPPPAGPSRPSPKREARPAG---SDVPGDRGGGSG 70
>Q60875:ARHG2_MOUSE Rho/Rac guanine nucleotide exchange factor 2 - Mus musculus (Mouse)| Length = 985 Score = 30.0 bits (66), Expect = 5.2 Identities = 18/50 (36%), Positives = 24/50 (48%), Gaps = 5/50 (10%) Frame = -2 Query: 155 RSLHRHHPVAPREAGRVGESNEEVQDEQD-----RQQAAGGRSPPHHDVD 21 RSLHR P REA +G + +QD D ++ + SPPH D Sbjct: 915 RSLHR--PFDDREAQELGSPEDRLQDSSDPDTGSEEEVSSRLSPPHSPRD 962
>Q5DRD6:PCDBD_PANTR Protocadherin beta 13 precursor - Pan troglodytes (Chimpanzee)| Length = 798 Score = 29.6 bits (65), Expect = 6.8 Identities = 16/39 (41%), Positives = 19/39 (48%) Frame = +2 Query: 38 VEICRRPLAGDPARPAPPRCFLPRGPLHEELQDDGGGGS 154 V +CRR A R C +P GPL L D GG G+ Sbjct: 711 VRLCRRSRAASVGR-----CLVPEGPLPGHLVDMGGTGT 744
>Q9WTL4:INSRR_MOUSE Insulin receptor-related protein precursor - Mus musculus (Mouse)| Length = 1300 Score = 29.6 bits (65), Expect = 6.8 Identities = 16/57 (28%), Positives = 30/57 (52%), Gaps = 2/57 (3%) Frame = -2 Query: 230 EHLLHNRVAVPPIALS*ITSNATERRSLHRHHPVAPREAG--RVGESNEEVQDEQDR 66 E+ LH+ + +P + N +R RH REAG R+G++N + + ++D+ Sbjct: 714 ENFLHHAITIPKAPWKVTSINKNPQRDSERHR----REAGLLRLGKNNSDFEIQEDK 766
>Q3J8R1:EFG_NITOC Elongation factor G - Nitrosococcus oceani (strain ATCC 19707 /| NCIMB 11848) Length = 697 Score = 29.6 bits (65), Expect = 6.8 Identities = 18/49 (36%), Positives = 23/49 (46%) Frame = +3 Query: 126 SYRMMAVEAPAFRGVRGDSGEGNRRDSNAIVEEMFGRMALQTTDYPGSG 272 SY VE P +GV+ D EG R S+ EE F +A + P G Sbjct: 284 SYMPSPVEVPPIKGVQKDETEGERHASD---EEPFAALAFKIASDPYVG 329
>P98163:YL_DROME Putative vitellogenin receptor precursor - Drosophila melanogaster| (Fruit fly) Length = 1984 Score = 29.6 bits (65), Expect = 6.9 Identities = 12/31 (38%), Positives = 17/31 (54%) Frame = -1 Query: 294 WECDGRLGLNQGSRLSAEPSFRTSPPQSRCC 202 WECDGR+ + GS + R+ PP + C Sbjct: 1175 WECDGRIDCSDGSDEHDKCVHRSCPPDMQRC 1205
>P25567:SRO9_YEAST RNA-binding protein SRO9 - Saccharomyces cerevisiae (Baker's yeast)| Length = 434 Score = 29.3 bits (64), Expect = 8.9 Identities = 14/55 (25%), Positives = 27/55 (49%), Gaps = 6/55 (10%) Frame = -2 Query: 176 TSNATERRSLHRHHPVAPREAGR------VGESNEEVQDEQDRQQAAGGRSPPHH 30 +SNA ++ H+H+ ++ + VGE + + Q+ Q+ + PPHH Sbjct: 121 SSNANRKKKHHQHNAKKQQQMKKDGFESAVGEEDSKDATSQENGQSTQQQQPPHH 175
>P41229:JAD1C_HUMAN Histone demethylase JARID1C - Homo sapiens (Human)| Length = 1560 Score = 29.3 bits (64), Expect = 8.9 Identities = 11/30 (36%), Positives = 17/30 (56%) Frame = -2 Query: 125 PREAGRVGESNEEVQDEQDRQQAAGGRSPP 36 P+ G EEVQ+E++ ++ GG PP Sbjct: 1479 PKRVRSSGPEAEEVQEEEELEEETGGEGPP 1508
>O44502:COG8_CAEEL Putative conserved oligomeric Golgi complex component 8 -| Caenorhabditis elegans Length = 743 Score = 29.3 bits (64), Expect = 8.9 Identities = 13/51 (25%), Positives = 26/51 (50%) Frame = -2 Query: 170 NATERRSLHRHHPVAPREAGRVGESNEEVQDEQDRQQAAGGRSPPHHDVDV 18 N E + H+P A E G E N+E+++++ ++ P H++D+ Sbjct: 629 NFGESEAKAAHNPEAHLELGETSE-NQEIREQEHKEVVITSTEPEFHEIDL 678
>P41698:BUD8_YEAST Bud site selection protein 8 - Saccharomyces cerevisiae (Baker's| yeast) Length = 603 Score = 29.3 bits (64), Expect = 8.9 Identities = 29/100 (29%), Positives = 42/100 (42%), Gaps = 9/100 (9%) Frame = +3 Query: 174 GDSGEGNRRDS-----NAIVEEMFGRMALQTTDYPGS----GPNDRHTPKAPGT*SCHVK 326 G GEG D + E F L+ + GS +D H+P APGT + +K Sbjct: 252 GSKGEGETEDEVIDQYEPVNESKFIPHKLKIPEKAGSIKSSTSDDSHSPGAPGTSARKIK 311 Query: 327 VQMLSSLTRNIQYMYRRFISSSSN*NLEPIKMGDYSKCKF 446 + SL NI + S SSN + +G ++ KF Sbjct: 312 IPQSPSLIGNI--LIPSHNSDSSNESSPKDHIGHNNEEKF 349 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 93,545,212 Number of extensions: 2036648 Number of successful extensions: 5138 Number of sequences better than 10.0: 17 Number of HSP's gapped: 5130 Number of HSP's successfully gapped: 19 Length of query: 179 Length of database: 100,686,439 Length adjustment: 106 Effective length of query: 73 Effective length of database: 71,611,169 Effective search space: 5227615337 Effective search space used: 5227615337 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)