ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf132i05
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1Os01g0886500:Os01g0886500 114 9e-26
2AK064219:Os11g0242700 55 4e-08
3AK069256:Os09g0134400 30 1.4
4AK100936:Os01g0775500 29 3.1
5AK121990:Os02g0598200 28 5.2
6AK064548:Os02g0598200 28 5.2
7AK064402:Os02g0598200 28 5.2
8Os05g0157600:Os05g0157600 28 8.9
9AK110058:Os06g0275700 28 8.9

>Os01g0886500:Os01g0886500 |
          Length = 135
 Score =  114 bits (284), Expect = 9e-26
 Identities = 62/122 (50%), Positives = 70/122 (57%)
 Frame = +2

Query: 80  LPMVRSDALGKLGPSFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 259
           LP+VRS+ALGKLGPSF                                            
Sbjct: 14  LPVVRSEALGKLGPSFGIGAGCGVGVCFGLIGGAGIGAGFPGLQLGLGAGAGCGIGIGFG 73

Query: 260 XXXXXXXXYDENGKYSNIRRSFQNSRSLPYDQEFDILFDEVMESTRKLIKATTKEIDKWR 439
                   YDENG+YSNIRRSFQNSR+LPYD++FDILFDE+MESTRKLIKAT+KEIDKWR
Sbjct: 74  YGFGKGIAYDENGRYSNIRRSFQNSRNLPYDEQFDILFDEMMESTRKLIKATSKEIDKWR 133

Query: 440 RM 445
           RM
Sbjct: 134 RM 135



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>AK064219:Os11g0242700 |
          Length = 140

 Score = 55.5 bits (132), Expect = 4e-08
 Identities = 25/52 (48%), Positives = 39/52 (75%)
 Frame = +2

Query: 284 YDENGKYSNIRRSFQNSRSLPYDQEFDILFDEVMESTRKLIKATTKEIDKWR 439
           YD+N +YSN+   FQ + SLP D    ++ DE++ +T+KL++AT+KEI+KWR
Sbjct: 90  YDQNKRYSNVGTMFQEAPSLPMDTVAGLV-DELVVNTKKLVRATSKEIEKWR 140



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>AK069256:Os09g0134400 |
          Length = 260

 Score = 30.4 bits (67), Expect = 1.4
 Identities = 17/44 (38%), Positives = 23/44 (52%)
 Frame = -3

Query: 492 YLAESLFVHVVCCSLYMRLHLSISFVVALISFLVLSITSSKRIS 361
           Y A S+ V   CC  +M  HL  S +VALI+F+       + IS
Sbjct: 144 YAALSILVFA-CCLYHMHCHLPSSLIVALIAFICSQSLRLRNIS 186



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>AK100936:Os01g0775500 |
          Length = 349

 Score = 29.3 bits (64), Expect = 3.1
 Identities = 15/41 (36%), Positives = 21/41 (51%)
 Frame = -2

Query: 694 WRKV*FEAILPAFQCETGVLQMNNVLPTATPRRIFPWGGNG 572
           W K+     LP+F  + G + ++      TP R  PWGGNG
Sbjct: 221 WNKM---VSLPSFYSDNGTMTIS------TPVRFGPWGGNG 252



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>AK121990:Os02g0598200 |
          Length = 1048

 Score = 28.5 bits (62), Expect = 5.2
 Identities = 17/63 (26%), Positives = 26/63 (41%), Gaps = 3/63 (4%)
 Frame = +1

Query: 376 RGDGEHQEADQSDDKGDRQVEAHVERTAHHMNKQG---FSEIRRQYSTLVKDQFRQGTCK 546
           R D + ++   SDD  D   E   +R+ H M K       E +R+      D  ++    
Sbjct: 120 RNDADEEKRKSSDDMRDGDDEEKKKRSRHDMKKNSRNDADEEKRKRKRKCSDDLKKSVVN 179

Query: 547 DAS 555
           DAS
Sbjct: 180 DAS 182



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>AK064548:Os02g0598200 |
          Length = 485

 Score = 28.5 bits (62), Expect = 5.2
 Identities = 17/63 (26%), Positives = 26/63 (41%), Gaps = 3/63 (4%)
 Frame = +1

Query: 376 RGDGEHQEADQSDDKGDRQVEAHVERTAHHMNKQG---FSEIRRQYSTLVKDQFRQGTCK 546
           R D + ++   SDD  D   E   +R+ H M K       E +R+      D  ++    
Sbjct: 120 RNDADEEKRKSSDDMRDGDDEEKKKRSRHDMKKNSRNDADEEKRKRKRKCSDDLKKSVVN 179

Query: 547 DAS 555
           DAS
Sbjct: 180 DAS 182



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>AK064402:Os02g0598200 |
          Length = 980

 Score = 28.5 bits (62), Expect = 5.2
 Identities = 17/63 (26%), Positives = 26/63 (41%), Gaps = 3/63 (4%)
 Frame = +1

Query: 376 RGDGEHQEADQSDDKGDRQVEAHVERTAHHMNKQG---FSEIRRQYSTLVKDQFRQGTCK 546
           R D + ++   SDD  D   E   +R+ H M K       E +R+      D  ++    
Sbjct: 52  RNDADEEKRKSSDDMRDGDDEEKKKRSRHDMKKNSRNDADEEKRKRKRKCSDDLKKSVVN 111

Query: 547 DAS 555
           DAS
Sbjct: 112 DAS 114



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>Os05g0157600:Os05g0157600 |
          Length = 521

 Score = 27.7 bits (60), Expect = 8.9
 Identities = 16/43 (37%), Positives = 21/43 (48%)
 Frame = -1

Query: 662 SISMRNRRFTDEQCAADSDAAQDIPVGREWRRGHMTLASLHVP 534
           S S + RR  +E  AA +  +     G   R GH TLAS  +P
Sbjct: 64  SSSKKKRRIEEESPAATTTTSTTATTGVMHREGHGTLASRPLP 106



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>AK110058:Os06g0275700 |
          Length = 973

 Score = 27.7 bits (60), Expect = 8.9
 Identities = 19/68 (27%), Positives = 37/68 (54%), Gaps = 7/68 (10%)
 Frame = -3

Query: 576 MASRSHDASILACAL-------TKLILHEGRILTAYLAESLFVHVVCCSLYMRLHLSISF 418
           M S++  A++LA  +       T ++  EG ++T+  +   F H++ CS+   L+LSI  
Sbjct: 510 MGSKTEAAAVLANIVESGLDPDTIVVNKEGHVITSKYSVYNFTHMLKCSMPDDLNLSIIR 569

Query: 417 VVALISFL 394
           V+  ++ L
Sbjct: 570 VLLALTAL 577


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 17,466,182
Number of extensions: 375731
Number of successful extensions: 1051
Number of sequences better than 10.0: 9
Number of HSP's gapped: 1048
Number of HSP's successfully gapped: 10
Length of query: 253
Length of database: 15,399,855
Length adjustment: 98
Effective length of query: 155
Effective length of database: 11,475,837
Effective search space: 1778754735
Effective search space used: 1778754735
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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