ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf134j05 |
|---|---|
| Clone Library Name | barley_pub |
>LOC_Os11g41870:12011.t03720:unspliced-genomic galactose-proton symporter, putative, expressed| Length = 5168 Score = 123 bits (263), Expect(3) = 4e-34 Identities = 51/54 (94%), Positives = 53/54 (98%) Frame = +1 / +1 Query: 94 TTSRRLADRKTAKFQKNITKRGSVPETTVKKGNDYPVGPIVLGFFIFVVIGSSL 255 TTSRRLADRKTAKFQKNITKRGSVPETTVKKGNDYPVGP+VLGFFIFVVIGS + Sbjct: 1408 TTSRRLADRKTAKFQKNITKRGSVPETTVKKGNDYPVGPLVLGFFIFVVIGSCM 1569 Score = 35.4 bits (71), Expect(3) = 4e-34 Identities = 16/32 (50%), Positives = 21/32 (65%) Frame = +1 / +1 Query: 247 SSLFQIIRTASSGGMA*TPSYINTVAAKFVRC 342 ++LFQIIRTA+SGGMA* S ++C Sbjct: 2122 AALFQIIRTATSGGMA*KQS*FKRFVIHCIQC 2217 Score = 30.4 bits (60), Expect(3) = 4e-34 Identities = 11/17 (64%), Positives = 14/17 (82%) Frame = +3 / +1 Query: 369 LSLN*CCKNCKQSYQSY 419 L+ +*C KNCKQ+Y SY Sbjct: 2863 LNFS*CLKNCKQNY*SY 2913 Score = 116 bits (247), Expect(2) = 7e-28 Identities = 48/52 (92%), Positives = 49/52 (94%) Frame = -3 / -1 Query: 248 DPMTTKMKNPRTIGPTG*SFPFFTVVSGTEPLLVMFFWNFAVFLSARRLEVV 93 DPMTT MKNP T GPTG*SFPFFTVVSGTEPLLV+FFWNFAVFLSARRLEVV Sbjct: 1562 DPMTTNMKNPSTRGPTG*SFPFFTVVSGTEPLLVIFFWNFAVFLSARRLEVV 1407 Score = 31.3 bits (62), Expect(2) = 7e-28 Identities = 10/14 (71%), Positives = 11/14 (78%) Frame = -2 / -3 Query: 294 GHPTTARCPDYLKQ 253 GHP + CPDYLKQ Sbjct: 2169 GHPAASCCPDYLKQ 2128 Score = 106 bits (226), Expect(2) = 3e-26 Identities = 40/56 (71%), Positives = 49/56 (87%) Frame = +3 / +3 Query: 84 SQDDHFQAPC*QEDGKVPEEHHQEGFSA*NHCEEGE*LSCWTYSSWILHLCGHRII 251 ++ D+F+APC*QED KVPEE+HQEGFSA*N+CEEGE LS WT +WILH+CGH I+ Sbjct: 1398 ARPDYFKAPC*QEDCKVPEEYHQEGFSA*NYCEEGERLSSWTSCAWILHICGHWIM 1565 Score = 35.4 bits (71), Expect(2) = 3e-26 Identities = 12/18 (66%), Positives = 15/18 (83%) Frame = +2 / +2 Query: 251 LCFR*SGQRAVVGWPEHR 304 LCFR*SGQ+ GWP++R Sbjct: 2126 LCFR*SGQQLAAGWPKNR 2179 Score = 95.5 bits (202), Expect(2) = 6e-21 Identities = 40/52 (76%), Positives = 45/52 (86%) Frame = -2 / -3 Query: 258 KQR*SDDHKDEESKNYRSNRIVIPLLHSGFRH*TPLGDVLLELCRLPVSKAP 103 + *S+DHK EESK+ RSN IV+PLLHS FRH*TPLGD+LLELC LPVSKAP Sbjct: 1572 RHT*SNDHKYEESKHKRSNWIVVPLLHSSFRH*TPLGDILLELCSLPVSKAP 1417 Score = 28.6 bits (56), Expect(2) = 6e-21 Identities = 12/14 (85%), Positives = 14/14 (100%) Frame = -3 / -1 Query: 293 AIPPLLAVLII*NR 252 AIPPL+AVLII*N+ Sbjct: 2168 AIPPLVAVLII*NK 2127 Score = 82.2 bits (173), Expect(2) = 7e-17 Identities = 40/51 (78%), Positives = 41/51 (80%) Frame = -1 / -2 Query: 250 MIR*PQR*RIQEL*VQQDSHSPSSQWFQALNPSW*CSSGTLPSSCQQGAWK 98 MI+*PQ *RIQ VQ DS SPSSQ FQALNPSW* SSGTL SSCQQGA K Sbjct: 1564 MIQ*PQI*RIQAQEVQLDSRSPSSQ*FQALNPSW*YSSGTLQSSCQQGALK 1412 Score = 28.1 bits (55), Expect(2) = 7e-17 Identities = 14/25 (56%), Positives = 18/25 (72%) Frame = -1 / -2 Query: 322 QLY*CMTVFRPSHHCSLS*LSETEM 248 Q+ * +VFRPS LS*LSET++ Sbjct: 2197 QIS*ISSVFRPSRR*LLS*LSETKL 2123 Score = 63.4 bits (132), Expect(2) = 4e-10 Identities = 29/34 (85%), Positives = 29/34 (85%) Frame = +2 / +2 Query: 98 LPGALLTGRRQSSRRTSPRGVQCLKPL*RRGMTI 199 L GALLTGR QSSRR SPRGVQCLK L*RRG TI Sbjct: 1412 LQGALLTGRLQSSRRISPRGVQCLKLL*RRGTTI 1513 Score = 24.0 bits (46), Expect(2) = 4e-10 Identities = 11/16 (68%), Positives = 11/16 (68%) Frame = +3 / +3 Query: 255 VSDNQDSEQWWDGLNT 302 VSDNQDS DGL T Sbjct: 2130 VSDNQDSN*RRDGLKT 2177
>LOC_Os12g32950:12012.t02988:unspliced-genomic membrane protein, putative, expressed| Length = 3164 Score = 120 bits (257), Expect(2) = 5e-30 Identities = 50/52 (96%), Positives = 52/52 (100%) Frame = +1 / +1 Query: 94 TTSRRLADRKTAKFQKNITKRGSVPETTVKKGNDYPVGPIVLGFFIFVVIGS 249 TTSRRLADRK+AKFQKNITKRGSVPETTVKKGNDYPVGP+VLGFFIFVVIGS Sbjct: 1639 TTSRRLADRKSAKFQKNITKRGSVPETTVKKGNDYPVGPMVLGFFIFVVIGS 1794 Score = 33.1 bits (66), Expect(2) = 5e-30 Identities = 14/17 (82%), Positives = 17/17 (100%) Frame = +1 / +2 Query: 247 SSLFQIIRTASSGGMA* 297 ++LFQIIRTA+SGGMA* Sbjct: 2885 AALFQIIRTATSGGMA* 2935 Score = 116 bits (249), Expect(2) = 7e-27 Identities = 47/52 (90%), Positives = 50/52 (96%) Frame = -3 / -1 Query: 248 DPMTTKMKNPRTIGPTG*SFPFFTVVSGTEPLLVMFFWNFAVFLSARRLEVV 93 DPMTTKMKNP T+GPTG*SFPFFTVVSGTEPL V+FFWNFA+FLSARRLEVV Sbjct: 1793 DPMTTKMKNPSTMGPTG*SFPFFTVVSGTEPLFVIFFWNFALFLSARRLEVV 1638 Score = 26.3 bits (51), Expect(2) = 7e-27 Identities = 11/14 (78%), Positives = 13/14 (92%) Frame = -3 / -3 Query: 293 AIPPLLAVLII*NR 252 AIPPL+AVLII N+ Sbjct: 2931 AIPPLVAVLIIWNK 2890 Score = 97.3 bits (206), Expect(2) = 4e-21 Identities = 35/59 (59%), Positives = 46/59 (77%) Frame = +3 / +3 Query: 75 TAQSQDDHFQAPC*QEDGKVPEEHHQEGFSA*NHCEEGE*LSCWTYSSWILHLCGHRII 251 T D+ +A C*QE+ KVPEE+H+EGFSA*++CEEGE*L CWT+ +W+LH C H I+ Sbjct: 1620 TISLHSDYLKASC*QEERKVPEEYHEEGFSA*DYCEEGE*LPCWTHGAWVLHFCRHWIM 1796 Score = 26.7 bits (52), Expect(2) = 4e-21 Identities = 10/15 (66%), Positives = 10/15 (66%) Frame = +3 / +1 Query: 255 VSDNQDSEQWWDGLN 299 V DNQD W DGLN Sbjct: 2893 VPDNQDGN*WRDGLN 2937 Score = 85.4 bits (180), Expect(2) = 1e-16 Identities = 36/52 (69%), Positives = 42/52 (80%) Frame = -2 / -3 Query: 258 KQR*SDDHKDEESKNYRSNRIVIPLLHSGFRH*TPLGDVLLELCRLPVSKAP 103 K *S+D K+EE K++ SNR+VIPLLHS RH*TPL D+LLELC LPVSK P Sbjct: 1803 KLT*SNDDKNEEPKHHGSNRVVIPLLHSSLRH*TPLRDILLELCALPVSKTP 1648 Score = 23.5 bits (45), Expect(2) = 1e-16 Identities = 8/13 (61%), Positives = 10/13 (76%) Frame = -2 / -2 Query: 291 HPTTARCPDYLKQ 253 HP T+ PDYL+Q Sbjct: 2929 HPATSCRPDYLEQ 2891 Score = 66.1 bits (138), Expect = 1e-10 Identities = 35/49 (71%), Positives = 37/49 (75%) Frame = -1 / -2 Query: 250 MIR*PQR*RIQEL*VQQDSHSPSSQWFQALNPSW*CSSGTLPSSCQQGA 104 MI+* Q+*R Q VQQ SHSPSSQ QALNPS * SSGTL SSCQQ A Sbjct: 1795 MIQ*RQK*RTQAPWVQQGSHSPSSQ*SQALNPSS*YSSGTLRSSCQQDA 1649 Score = 56.1 bits (116), Expect(2) = 4e-08 Identities = 25/31 (80%), Positives = 26/31 (83%) Frame = +2 / +2 Query: 104 GALLTGRRQSSRRTSPRGVQCLKPL*RRGMT 196 G LLTGR QSSRR S RGVQCL+ L*RRGMT Sbjct: 1649 GVLLTGRAQSSRRISRRGVQCLRLL*RRGMT 1741 Score = 23.5 bits (45), Expect(2) = 4e-08 Identities = 8/13 (61%), Positives = 10/13 (76%) Frame = +2 / +3 Query: 254 CFR*SGQRAVVGW 292 C R*SG++ V GW Sbjct: 2892 CSR*SGRQLVAGW 2930
>LOC_Os07g39400:12007.t03601:unspliced-genomic sorbitol transporter, putative, expressed| Length = 5974 Score = 61.6 bits (128), Expect(2) = 9e-22 Identities = 23/25 (92%), Positives = 25/25 (100%) Frame = +1 / +1 Query: 175 TVKKGNDYPVGPIVLGFFIFVVIGS 249 TVKKGNDYPVGPIVLGFF+FVV+GS Sbjct: 2020 TVKKGNDYPVGPIVLGFFVFVVVGS 2094 Score = 61.1 bits (127), Expect(2) = 9e-22 Identities = 24/32 (75%), Positives = 28/32 (87%) Frame = +1 / +1 Query: 88 KMTTSRRLADRKTAKFQKNITKRGSVPETTVK 183 K TTSRRL+DRK A+F+KN+TKRGSVPET K Sbjct: 1936 KQTTSRRLSDRKVARFEKNVTKRGSVPETVKK 2031 Score = 50.1 bits (103), Expect(2) = 7e-10 Identities = 23/30 (76%), Positives = 23/30 (76%) Frame = -3 / -3 Query: 182 FTVVSGTEPLLVMFFWNFAVFLSARRLEVV 93 F VSGTEPLLV FF N A FLS RRLEVV Sbjct: 2030 FLTVSGTEPLLVTFFSNRATFLSERRLEVV 1941 Score = 32.2 bits (64), Expect(2) = 7e-10 Identities = 13/23 (56%), Positives = 19/23 (82%) Frame = -2 / -2 Query: 249 *SDDHKDEESKNYRSNRIVIPLL 181 *+++HKDE+SK+ SNRI+I L Sbjct: 2094 *TNNHKDEKSKHNGSNRIIISFL 2026 Score = 51.9 bits (107), Expect = 3e-06 Identities = 22/39 (56%), Positives = 25/39 (64%) Frame = -3 / -3 Query: 257 NRDDPMTTKMKNPRTIGPTG*SFPFFTVVSGTEPLLVMF 141 N +P TTK KNP T+GPTG*SFPF TV L+ F Sbjct: 2102 NLHEPTTTKTKNPSTMGPTG*SFPFLTVSGTEPLLVTFF 1986 Score = 37.7 bits (76), Expect(3) = 7e-06 Identities = 12/20 (60%), Positives = 16/20 (80%) Frame = +3 / +3 Query: 180 EEGE*LSCWTYSSWILHLCG 239 +E +*LSCWT+ +WI LCG Sbjct: 2025 QERK*LSCWTHCAWIFRLCG 2084 Score = 30.9 bits (61), Expect(3) = 7e-06 Identities = 15/35 (42%), Positives = 20/35 (57%) Frame = +3 / +3 Query: 78 AQSQDDHFQAPC*QEDGKVPEEHHQEGFSA*NHCE 182 A + D+ +A E G V EE HQEGF +*+ E Sbjct: 1926 ADDETDYLKASLR*ESGTV*EERHQEGFCS*DSQE 2030 Score = 24.0 bits (46), Expect(3) = 7e-06 Identities = 9/14 (64%), Positives = 12/14 (85%) Frame = +1 / +3 Query: 247 SSLFQIIRTASSGG 288 ++LFQIIRTA + G Sbjct: 2823 AALFQIIRTAQNAG 2864 Score = 25.4 bits (49), Expect(2) = 1.2 Identities = 11/17 (64%), Positives = 12/17 (70%) Frame = -1 / -1 Query: 169 QALNPSW*CSSGTLPSS 119 Q NPSW* SS T+P S Sbjct: 2017 QEQNPSW*RSSQTVPLS 1967 Score = 24.9 bits (48), Expect(2) = 1.2 Identities = 12/22 (54%), Positives = 15/22 (68%) Frame = -1 / -1 Query: 256 TEMIR*PQR*RIQEL*VQQDSH 191 T M + PQR +IQ VQQD+H Sbjct: 2101 TYMNQQPQRRKIQAQWVQQDNH 2036 Score = 33.1 bits (66), Expect = 1.2 Identities = 14/42 (33%), Positives = 22/42 (52%) Frame = -2 / -2 Query: 228 EESKNYRSNRIVIPLLHSGFRH*TPLGDVLLELCRLPVSKAP 103 +E + + +I R+ TPLGDVLL+ C P+ + P Sbjct: 2076 DEKSKHNGSNRIIISFLDCLRNRTPLGDVLLKPCHFPI*ETP 1951
>LOC_Os01g61200:12001.t05500:unspliced-genomic anther-specific proline-rich protein APG precursor, putative,| expressed Length = 1879 Score = 35.4 bits (71), Expect = 0.24 Identities = 10/27 (37%), Positives = 14/27 (51%) Frame = -1 / -2 Query: 127 PSSCQQGAWKWSSWLWAVSGKLAGKEW 47 P + + +W+W W W G L G EW Sbjct: 501 PRTLAEFSWRWKWWWWRKGGALLGVEW 421
>LOC_Os01g61190:12001.t05499:unspliced-genomic protein binding protein, putative, expressed| Length = 4655 Score = 35.4 bits (71), Expect = 0.24 Identities = 10/27 (37%), Positives = 14/27 (51%) Frame = -1 / +3 Query: 127 PSSCQQGAWKWSSWLWAVSGKLAGKEW 47 P + + +W+W W W G L G EW Sbjct: 4155 PRTLAEFSWRWKWWWWRKGGALLGVEW 4235
>LOC_Os10g29190:12010.t02264:unspliced-genomic speckle-type POZ protein, putative, expressed| Length = 1145 Score = 35.0 bits (70), Expect = 0.34 Identities = 15/33 (45%), Positives = 19/33 (57%) Frame = -2 / -1 Query: 141 LLELCRLPVSKAPGSGHLGFGRCPVSSPARNGS 43 L ++ LPV G GH G G SSP+R+GS Sbjct: 548 LQQVAELPVHVGRGHGHEGLGEVGQSSPSRHGS 450
>LOC_Os05g16370:12005.t01407:unspliced-genomic retrotransposon protein, putative, Ty1-copia subclass| Length = 3917 Score = 30.4 bits (60), Expect(2) = 0.40 Identities = 11/25 (44%), Positives = 15/25 (60%) Frame = +3 / +1 Query: 18 PKLPTGCTSSHSLPASLPDTAQSQD 92 PK P T+SHS A+ PD ++ D Sbjct: 2521 PKAPVSPTASHSASATTPDAPEAHD 2595 Score = 25.4 bits (49), Expect(2) = 0.40 Identities = 8/11 (72%), Positives = 8/11 (72%) Frame = +3 / +1 Query: 195 LSCWTYSSWIL 227 L CWT S WIL Sbjct: 3502 LGCWTVSLWIL 3534
>LOC_Os03g14400:12003.t01229:unspliced-genomic cytochrome P450 76B1, putative, expressed| Length = 1915 Score = 34.1 bits (68), Expect = 0.63 Identities = 18/43 (41%), Positives = 19/43 (44%) Frame = +2 / +3 Query: 11 HQAQATHRLHQLPFLAGELTGHRPKPR*PLPGALLTGRRQSSR 139 H A HR H+ L G H P PR L AL GRR R Sbjct: 243 HDAPPRHRHHRRRLLPGRRPRHPPAPRRRLLRALRAGRRPRVR 371
>LOC_Os07g01030:12007.t00003:unspliced-genomic glycosyl transferase, group 1 family protein, putative, expressed| Length = 3889 Score = 27.2 bits (53), Expect(2) = 0.91 Identities = 13/33 (39%), Positives = 15/33 (45%) Frame = +2 / +2 Query: 77 RPKPR*PLPGALLTGRRQSSRRTSPRGVQCLKP 175 RP P P PGA L RR+ S + L P Sbjct: 131 RPSPTPPTPGAALPHRRRRSPNMAAWNTSILLP 229 Score = 23.5 bits (45), Expect(2) = 0.91 Identities = 10/16 (62%), Positives = 10/16 (62%) Frame = +2 / +3 Query: 53 LAGELTGHRPKPR*PL 100 LAGEL RP P PL Sbjct: 66 LAGELPSSRPPPSHPL 113
>LOC_Os12g04470:12012.t00336:unspliced-genomic hypothetical protein| Length = 1441 Score = 33.1 bits (66), Expect = 1.2 Identities = 10/26 (38%), Positives = 14/26 (53%) Frame = -1 / +2 Query: 124 SSCQQGAWKWSSWLWAVSGKLAGKEW 47 S+ + A +W W W KL G+EW Sbjct: 104 SAERPSAMRWMGWEWEARAKLGGREW 181
>LOC_Os10g29880:12010.t02326:unspliced-genomic hypothetical protein| Length = 1711 Score = 33.1 bits (66), Expect = 1.2 Identities = 12/30 (40%), Positives = 17/30 (56%) Frame = -2 / +2 Query: 111 KAPGSGHLGFGRCPVSSPARNGSWCSRWVA 22 ++PG+G +G P S AR WC+R A Sbjct: 167 RSPGAGAVGHALAPSISRARRSGWCARRTA 256
>LOC_Os03g13770:12003.t01170:unspliced-genomic expressed protein| Length = 4184 Score = 32.7 bits (65), Expect = 1.6 Identities = 14/31 (45%), Positives = 18/31 (58%) Frame = -2 / +2 Query: 120 PVSKAPGSGHLGFGRCPVSSPARNGSWCSRW 28 P + AP SG P+SSPAR+ + CS W Sbjct: 284 PTTSAPTSGTSR*APPPLSSPARSPTCCSTW 376
>LOC_Os03g19600:12003.t01725:unspliced-genomic PE_PGRS family protein, putative, expressed| Length = 2044 Score = 27.2 bits (53), Expect(2) = 1.7 Identities = 6/13 (46%), Positives = 8/13 (61%) Frame = -1 / +3 Query: 118 CQQGAWKWSSWLW 80 C + W+WS W W Sbjct: 651 CWRRTWRWSRWWW 689 Score = 22.6 bits (43), Expect(2) = 1.7 Identities = 5/8 (62%), Positives = 5/8 (62%) Frame = -2 / +3 Query: 42 WCSRWVAW 19 WC RW W Sbjct: 690 WCRRWAWW 713
>LOC_Os11g45908:12011.t04116:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 3891 Score = 25.4 bits (49), Expect(3) = 1.8 Identities = 9/17 (52%), Positives = 10/17 (58%) Frame = -1 / -3 Query: 193 HSPSSQWFQALNPSW*C 143 H P SQ+ Q P W*C Sbjct: 3001 HHP*SQYHQHTQPRW*C 2951 Score = 24.4 bits (47), Expect(3) = 1.8 Identities = 5/10 (50%), Positives = 7/10 (70%) Frame = -1 / -1 Query: 109 GAWKWSSWLW 80 G W W+ W+W Sbjct: 2142 GFWDWALWVW 2113 Score = 21.7 bits (41), Expect(3) = 1.8 Identities = 6/6 (100%), Positives = 6/6 (100%) Frame = -1 / -1 Query: 295 RPSHHC 278 RPSHHC Sbjct: 3576 RPSHHC 3559
>LOC_Os12g37980:12012.t03479:unspliced-genomic senescence-induced receptor-like serine/threonine-protein kinase| precursor, putative, expressed Length = 6946 Score = 32.2 bits (64), Expect = 2.3 Identities = 14/27 (51%), Positives = 17/27 (62%) Frame = +2 / +3 Query: 74 HRPKPR*PLPGALLTGRRQSSRRTSPR 154 HRP+PR PLP L RR+ RR + R Sbjct: 246 HRPRPRRPLPHRPLLPRRRLRRRRAGR 326
>LOC_Os03g17510:12003.t05670:unspliced-genomic methyltransferase small domain, putative, expressed| Length = 2557 Score = 25.8 bits (50), Expect(2) = 2.3 Identities = 11/25 (44%), Positives = 13/25 (52%) Frame = +2 / +2 Query: 101 PGALLTGRRQSSRRTSPRGVQCLKP 175 PG + R S+RRT PR C P Sbjct: 296 PGTPSSSRSPSTRRTLPRPSACSPP 370 Score = 23.5 bits (45), Expect(2) = 2.3 Identities = 9/20 (45%), Positives = 11/20 (55%) Frame = +3 / +2 Query: 27 PTGCTSSHSLPASLPDTAQS 86 P GC++ PAS P T S Sbjct: 254 PAGCSTLSRSPASSPGTPSS 313
>LOC_Os06g20040:12006.t01821:unspliced-genomic aspartic proteinase nepenthesin-2 precursor, putative, expressed| Length = 7314 Score = 31.8 bits (63), Expect = 3.1 Identities = 11/23 (47%), Positives = 12/23 (52%) Frame = -1 / +2 Query: 157 PSW*CSSGTLPSSCQQGAWKWSS 89 PSW +SG P C AW W S Sbjct: 6605 PSWTPASGAPPRGCASRAWTWRS 6673
>LOC_Os08g01590:12008.t00058:unspliced-genomic expressed protein| Length = 1747 Score = 31.3 bits (62), Expect = 4.3 Identities = 13/34 (38%), Positives = 19/34 (55%) Frame = +1 / +2 Query: 58 RRAYRTPPKAKMTTSRRLADRKTAKFQKNITKRG 159 RRA R PP+ ++ RL R+ A Q+ + RG Sbjct: 809 RRAARLPPRPRLHRGPRLPQRRLAPRQRRLRPRG 910
>LOC_Os01g23440:12001.t02071:unspliced-genomic expressed protein| Length = 3413 Score = 31.3 bits (62), Expect = 4.3 Identities = 15/36 (41%), Positives = 17/36 (47%) Frame = +2 / -1 Query: 47 PFLAGELTGHRPKPR*PLPGALLTGRRQSSRRTSPR 154 P L GH +PR PLP A RRQ+ R R Sbjct: 710 PSLCNGAPGHGRRPRRPLPRAAPCSRRQAGRSCQRR 603
>LOC_Os01g23370:12001.t02064:unspliced-genomic hypothetical protein| Length = 3217 Score = 31.3 bits (62), Expect = 4.3 Identities = 15/36 (41%), Positives = 17/36 (47%) Frame = +2 / -3 Query: 47 PFLAGELTGHRPKPR*PLPGALLTGRRQSSRRTSPR 154 P L GH +PR PLP A RRQ+ R R Sbjct: 710 PSLCNGAPGHGRRPRRPLPRAAPCSRRQAGRSCQRR 603
>LOC_Os05g35470:12005.t03140:unspliced-genomic hydrolase, putative, expressed| Length = 1448 Score = 25.4 bits (49), Expect(2) = 4.3 Identities = 8/14 (57%), Positives = 9/14 (64%) Frame = -1 / +2 Query: 310 CMTVFRPSHHCSLS 269 C T F P H CS+S Sbjct: 1169 CTTTFSPDHPCSVS 1210 Score = 23.1 bits (44), Expect(2) = 4.3 Identities = 9/25 (36%), Positives = 12/25 (48%) Frame = -1 / +3 Query: 145 CSSGTLPSSCQQGAWKWSSWLWAVS 71 C + S GA+ S WLW +S Sbjct: 1332 CKFNSFVSCFGVGAFNVSLWLWHIS 1406
>LOC_Os05g23340:12005.t01992:unspliced-genomic expressed protein| Length = 2999 Score = 29.9 bits (59), Expect(2) = 4.6 Identities = 7/17 (41%), Positives = 11/17 (64%) Frame = -1 / -1 Query: 112 QGAWKWSSWLWAVSGKL 62 +G W W++W WA+ L Sbjct: 1022 EGCWTWATWHWAIFSSL 972 Score = 21.7 bits (41), Expect(2) = 4.6 Identities = 12/31 (38%), Positives = 15/31 (48%) Frame = -1 / -1 Query: 196 SHSPSSQWFQALNPSW*CSSGTLPSSCQQGA 104 S SPSS + +PS + GT SC A Sbjct: 2321 SSSPSSSSSSSSSPSSLTTLGTSVRSCSPSA 2229
>LOC_Os01g69130:12001.t06267:unspliced-genomic dynamin-related protein 3A, putative, expressed| Length = 8206 Score = 30.9 bits (61), Expect = 5.8 Identities = 14/40 (35%), Positives = 20/40 (50%) Frame = -3 / -1 Query: 383 SVQTKCF*EDKL*QHRTNLAATVLMYDGVQAIPPLLAVLI 264 S+ KC+* KL +T L + +GV +PPL I Sbjct: 7420 SISMKCY*NGKLSSDKTYLVCLLKDLEGVTYLPPLYGYFI 7301
>LOC_Os09g27590:12009.t02437:unspliced-genomic expressed protein| Length = 1849 Score = 30.9 bits (61), Expect = 5.9 Identities = 10/26 (38%), Positives = 12/26 (46%) Frame = -1 / -3 Query: 106 AWKWSSWLWAVSGKLAGKEWELVQPV 29 +W W W W S AG W +PV Sbjct: 668 SWWWLQWQWCCSSSPAGCSWN*RRPV 591
>LOC_Os09g20510:12009.t01785:unspliced-genomic major Facilitator Superfamily protein, expressed| Length = 2542 Score = 30.9 bits (61), Expect = 5.9 Identities = 13/29 (44%), Positives = 17/29 (58%) Frame = +2 / -3 Query: 65 LTGHRPKPR*PLPGALLTGRRQSSRRTSP 151 L+ HRP P P+ A + R+ RRTSP Sbjct: 2447 LSHHRPSPPPPIQRARIAACRRRHRRTSP 2361
>LOC_Os08g18880:12008.t01709:unspliced-genomic expressed protein| Length = 3600 Score = 30.9 bits (61), Expect = 5.9 Identities = 10/26 (38%), Positives = 16/26 (61%) Frame = -2 / -2 Query: 93 HLGFGRCPVSSPARNGSWCSRWVAWA 16 H G+G+ V PA G++C W +W+ Sbjct: 128 HAGWGKEAVVGPAVAGNFCCYWSSWS 51
>LOC_Os08g03100:12008.t00204:unspliced-genomic lectin-like receptor kinase 1, putative| Length = 2739 Score = 30.9 bits (61), Expect = 5.9 Identities = 21/81 (25%), Positives = 32/81 (39%) Frame = -2 / +2 Query: 297 SGHPTTARCPDYLKQR*SDDHKDEESKNYRSNRIVIPLLHSGFRH*TPLGDVLLELCRLP 118 SG P AR P + S ++ E+K P H G++ TP+ R Sbjct: 242 SGTPPPARWPASPRASPSTSSREIEAKRAMG*PSSSPATHRGYQRATPVAKTSA*RTRRS 421 Query: 117 VSKAPGSGHLGFGRCPVSSPA 55 S+ +G L P S+P+ Sbjct: 422 ASRPARTGSLPSSSTPSSTPS 484
>LOC_Os03g17050:12003.t01486:unspliced-genomic expressed protein| Length = 8927 Score = 30.9 bits (61), Expect = 5.9 Identities = 12/21 (57%), Positives = 15/21 (71%) Frame = +2 / -2 Query: 59 GELTGHRPKPR*PLPGALLTG 121 G L HRP+P+ PLP LL+G Sbjct: 817 GLLRRHRPRPKPPLPRRLLSG 755
>LOC_Os03g16470:12003.t01430:unspliced-genomic expressed protein| Length = 1943 Score = 30.9 bits (61), Expect = 5.9 Identities = 9/16 (56%), Positives = 13/16 (81%) Frame = -1 / +3 Query: 133 TLPSSCQQGAWKWSSW 86 T+ SCQ GA++WS+W Sbjct: 1251 TIELSCQHGAFQWSTW 1298
>LOC_Os01g08320:12001.t00710:unspliced-genomic OsIAA1 - Auxin-responsive Aux/IAA gene family member, expressed| Length = 2763 Score = 30.9 bits (61), Expect = 5.9 Identities = 11/25 (44%), Positives = 16/25 (64%) Frame = +2 / -1 Query: 8 QHQAQATHRLHQLPFLAGELTGHRP 82 +H + HR+HQLP + GEL + P Sbjct: 762 RHVLRPVHRVHQLPLVVGELPCNFP 688
>LOC_Os10g11794:12010.t00975:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 11550 Score = 24.4 bits (47), Expect(2) = 6.6 Identities = 8/24 (33%), Positives = 12/24 (50%) Frame = -1 / -3 Query: 97 WSSWLWAVSGKLAGKEWELVQPVG 26 WS W W + +G W L + +G Sbjct: 2032 WSWWRWFWCRRSSGCSWSLARWLG 1961 Score = 23.1 bits (44), Expect(2) = 6.6 Identities = 9/22 (40%), Positives = 12/22 (54%) Frame = -2 / -1 Query: 144 VLLELCRLPVSKAPGSGHLGFG 79 +L C P+ +PG G GFG Sbjct: 2073 LLAGTCEEPLPDSPGRGGDGFG 2008
>LOC_Os03g63970:12003.t05613:unspliced-genomic gibberellin 20 oxidase 1, putative, expressed| Length = 1851 Score = 26.7 bits (52), Expect(2) = 7.3 Identities = 6/10 (60%), Positives = 7/10 (70%) Frame = -1 / +2 Query: 109 GAWKWSSWLW 80 G W+W SW W Sbjct: 371 GRWRWRSWRW 400 Score = 23.5 bits (45), Expect(2) = 7.3 Identities = 9/21 (42%), Positives = 12/21 (57%) Frame = -2 / +2 Query: 78 RCPVSSPARNGSWCSRWVAWA 16 R P SS R WC+R +W+ Sbjct: 1166 RWPSSSARRWTRWCARRRSWS 1228
>LOC_Os03g25710:12003.t02268:unspliced-genomic hypothetical protein| Length = 2763 Score = 24.4 bits (47), Expect(2) = 7.4 Identities = 10/22 (45%), Positives = 12/22 (54%) Frame = +2 / -2 Query: 101 PGALLTGRRQSSRRTSPRGVQC 166 PGA +GR S R T+P C Sbjct: 1439 PGASASGRPASGRPTAPASGAC 1374 Score = 23.1 bits (44), Expect(2) = 7.4 Identities = 8/18 (44%), Positives = 11/18 (61%) Frame = +1 / -2 Query: 55 CRRAYRTPPKAKMTTSRR 108 C + R PP+ + T SRR Sbjct: 1592 CSPSCRDPPRRRRTASRR 1539
>LOC_Os05g10520:12005.t00887:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 4808 Score = 30.4 bits (60), Expect = 8.0 Identities = 12/26 (46%), Positives = 18/26 (69%) Frame = +3 / +3 Query: 177 CEEGE*LSCWTYSSWILHLCGHRIIS 254 C +G+* SC++ S ++ C HRIIS Sbjct: 723 CSQGK*KSCFSLSPYL**FCLHRIIS 800
>LOC_Os03g09140:12003.t00769:unspliced-genomic ras-related protein Rab-6A, putative, expressed| Length = 2612 Score = 30.4 bits (60), Expect = 8.0 Identities = 14/52 (26%), Positives = 26/52 (50%) Frame = -3 / -1 Query: 461 IFFFFLGKLVHLTFIRLIALFTVLTASVQTKCF*EDKL*QHRTNLAATVLMY 306 +F+F G+ HL + + L + S +T C +* H+TN+ +L + Sbjct: 1400 LFYFQQGR*SHLRLVVYLPLQSTSIYSKRTACLKTRTI*DHKTNIQWIILYF 1245
>LOC_Os02g19490:12002.t01742:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 2578 Score = 30.4 bits (60), Expect = 8.0 Identities = 12/26 (46%), Positives = 18/26 (69%) Frame = +3 / +1 Query: 177 CEEGE*LSCWTYSSWILHLCGHRIIS 254 C +G+ SC++ SS++ C HRIIS Sbjct: 322 CSQGKQKSCFSLSSYL**FCLHRIIS 399
>LOC_Os10g28370:12010.t02189:unspliced-genomic chlorophyllase-2, chloroplast precursor, putative, expressed| Length = 1340 Score = 30.4 bits (60), Expect = 8.0 Identities = 14/25 (56%), Positives = 14/25 (56%) Frame = +2 / +2 Query: 32 RLHQLPFLAGELTGHRPKPR*PLPG 106 R QLP AG GHR PR P PG Sbjct: 914 RRRQLPARAGAGDGHRHGPRRPRPG 988
>LOC_Os07g20890:12007.t01892:unspliced-genomic retrotransposon, putative, centromere-specific| Length = 6395 Score = 30.4 bits (60), Expect = 8.0 Identities = 16/38 (42%), Positives = 21/38 (55%) Frame = -2 / +3 Query: 156 PLGDVLLELCRLPVSKAPGSGHLGFGRCPVSSPARNGS 43 PLG + L L LP++ +G LG GRC S P G+ Sbjct: 5361 PLGFLSLPLAPLPLATGIVTGGLGPGRCRRSLPLVAGA 5474
>LOC_Os06g36000:12006.t03297:unspliced-genomic transcriptional factor TINY, putative| Length = 1102 Score = 30.4 bits (60), Expect = 8.0 Identities = 14/44 (31%), Positives = 24/44 (54%) Frame = -1 / -2 Query: 199 DSHSPSSQWFQALNPSW*CSSGTLPSSCQQGAWKWSSWLWAVSG 68 D+ +PS+Q + + NPS C++ P + A WS W+ +G Sbjct: 1071 DATTPSAQTWSSSNPSASCTAMPPPPPSCRHAAGWSYHGWSAAG 940
>LOC_Os04g58920:12004.t05353:unspliced-genomic ubiquitin-protein ligase, putative, expressed| Length = 1699 Score = 30.4 bits (60), Expect = 8.0 Identities = 12/44 (27%), Positives = 16/44 (36%) Frame = -1 / +1 Query: 178 QWFQALNPSW*CSSGTLPSSCQQGAWKWSSWLWAVSGKLAGKEW 47 +W A W S T SS +W W W + G+ W Sbjct: 955 RWTPARWRCWSTCSWTGQSSGAGASWPWRRWTGCAGARRGGRRW 1086
>LOC_Os04g40730:12004.t03634:unspliced-genomic steroid dehydrogenase SPM2, putative, expressed| Length = 3358 Score = 30.4 bits (60), Expect = 8.0 Identities = 11/20 (55%), Positives = 14/20 (70%) Frame = -1 / +3 Query: 160 NPSW*CSSGTLPSSCQQGAW 101 +PSW SS T PS+ +GAW Sbjct: 2991 SPSWTGSSSTCPSASARGAW 3050
>LOC_Os04g08034:12004.t00678:unspliced-genomic polycomb protein EMBRYONIC FLOWER 2, putative, expressed| Length = 15813 Score = 30.4 bits (60), Expect = 8.0 Identities = 10/16 (62%), Positives = 14/16 (87%) Frame = +1 / -2 Query: 412 NLINVKWTSLPKKKKK 459 +++N+ W SLPKKKKK Sbjct: 776 SVVNLVWCSLPKKKKK 729
>LOC_Os03g03910:12003.t00272:unspliced-genomic catalase-1, putative, expressed| Length = 3159 Score = 30.4 bits (60), Expect = 8.0 Identities = 12/34 (35%), Positives = 18/34 (52%) Frame = +2 / +2 Query: 29 HRLHQLPFLAGELTGHRPKPR*PLPGALLTGRRQ 130 HR ++ + + PR P+P A LTGRR+ Sbjct: 1943 HRDEEVDYFPSRYDPAKHAPRYPIPSATLTGRRE 2044
>LOC_Os02g45880:12002.t04175:unspliced-genomic expressed protein| Length = 708 Score = 30.4 bits (60), Expect = 8.0 Identities = 11/31 (35%), Positives = 13/31 (41%) Frame = -2 / +2 Query: 120 PVSKAPGSGHLGFGRCPVSSPARNGSWCSRW 28 P P P SSP R+ SW +RW Sbjct: 362 PPPPPPPESSAAASNTPASSPRRSSSWTARW 454
>LOC_Os01g42934:12001.t03810:unspliced-genomic retrotransposon protein, putative, Ty1-copia subclass| Length = 2119 Score = 30.4 bits (60), Expect = 8.0 Identities = 15/48 (31%), Positives = 23/48 (47%) Frame = -1 / +2 Query: 151 W*CSSGTLPSSCQQGAWKWSSWLWAVSGKLAGKEWELVQPVGSLGLML 8 W ++ +L ++ Q+ A KW W +G A K + G LGL L Sbjct: 182 WRSTAASLAANWQRSAAKWRRWAAKRAGA*AAKTAAAAKSWGRLGLTL 325
>LOC_Os01g33869:12001.t02950:unspliced-genomic expressed protein| Length = 15642 Score = 30.4 bits (60), Expect = 8.0 Identities = 13/26 (50%), Positives = 18/26 (69%) Frame = +1 / -1 Query: 169 ETTVKKGNDYPVGPIVLGFFIFVVIG 246 E T KKG+ VGPI + F+ F++IG Sbjct: 11514 EVTKKKGSI*HVGPIYIIFYYFLLIG 11437
>LOC_Os12g36270:12012.t03312:unspliced-genomic expressed protein| Length = 5099 Score = 26.3 bits (51), Expect(3) = 8.4 Identities = 11/26 (42%), Positives = 14/26 (53%) Frame = +2 / +1 Query: 65 LTGHRPKPR*PLPGALLTGRRQSSRR 142 L H+P P P PG L+ R +RR Sbjct: 184 LRQHQPHPAVPRPGCLVPPRPSPTRR 261 Score = 21.7 bits (41), Expect(3) = 8.4 Identities = 7/20 (35%), Positives = 11/20 (55%) Frame = +3 / +1 Query: 225 LHLCGHRIISVSDNQDSEQW 284 LH+C R+ S + D +W Sbjct: 1117 LHICKGRMTSGMEPVDDSEW 1176 Score = 21.7 bits (41), Expect(3) = 8.4 Identities = 9/16 (56%), Positives = 10/16 (62%) Frame = +1 / +1 Query: 301 PSYINTVAAKFVRCCH 348 PS +AA FVR CH Sbjct: 2668 PSSSCHMAAPFVRVCH 2715
>LOC_Os04g20230:12004.t01761:unspliced-genomic expressed protein| Length = 4347 Score = 25.8 bits (50), Expect(2) = 8.5 Identities = 13/30 (43%), Positives = 14/30 (46%) Frame = +2 / +3 Query: 80 PKPR*PLPGALLTGRRQSSRRTSPRGVQCL 169 P P P P A RR RR PRG + L Sbjct: 381 PPPAAPHPRARAHARRGPLRRAGPRGRRLL 470 Score = 25.4 bits (49), Expect(2) = 8.5 Identities = 9/41 (21%), Positives = 23/41 (56%) Frame = +1 / +2 Query: 211 IVLGFFIFVVIGSSLFQIIRTASSGGMA*TPSYINTVAAKF 333 I++ F IF+++G+++ +++ G + SY+ K+ Sbjct: 4067 IIMCFDIFILVGTNMLRLVSPDYCGSLYS*TSYLTGFVLKY 4189 Database: tigr.seq.out Posted date: Jul 20, 2007 8:58 AM Number of letters in database: 166,841,660 Number of sequences in database: 56,278 Lambda K H 0.318 0.134 0.401 Matrix: BLOSUM62 Number of Sequences: 56278 Number of Hits to DB: 188,490,794 Number of extensions: 3189500 Number of successful extensions: 15313 Number of sequences better than 10.0: 48 Length of query: 154 Length of database: 55,613,886 Length adjustment: 47 Effective length of query: 107 Effective length of database: 52,968,820 Effective search space: 5667663740 Effective search space used: 5667663740 Neighboring words threshold: 13 Window for multiple hits: 40 X1: 16 ( 7.3 bits)
