ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf134i16 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK121898:Os07g0644100 | 218 | 4e-90 | 2 | AK073142:Os05g0411300 | 98 | 1e-20 | 3 | AK058751:Os05g0411300 | 98 | 1e-20 | 4 | AK071931:Os05g0411300 | 80 | 2e-15 | 5 | AK072274:Os05g0510400 | 29 | 4.7 | 6 | AK068685:Os05g0510400 | 29 | 4.7 | 7 | Os08g0511200:Os08g0511200 | 29 | 6.1 |
|---|
>AK121898:Os07g0644100 | Length = 568 Score = 218 bits (555), Expect(2) = 4e-90 Identities = 123/211 (58%), Positives = 149/211 (70%), Gaps = 6/211 (2%) Frame = +2 Query: 5 EGIVLGPSQSRHGRVLAVDGPRDSVSEGVDSELPHNSSQTLPVLLYIPRNEACEDQWKSG 184 EG + PS HGR+LAV+GP++SVS GVD ++P N S+TLP LLY+PRN + Sbjct: 274 EGAAIVPSH--HGRILAVEGPQNSVSNGVDPKVPQNGSETLPALLYLPRNGKHVKINGNL 331 Query: 185 YPVCCCE*ESFFTHVSPDG-KSSCNQGQEDTSLAIPGHVAQLNSGEVMESAKAIKNKLMA 361 E + +S G K S NQG+E+TSLAIPG+VA L +GEVM+SAK + N+LMA Sbjct: 332 VIKSIVASEKASSRLSNYGEKGSGNQGKEETSLAIPGYVAPLEAGEVMDSAKGM-NELMA 390 Query: 362 LPAGDGSIYREDDELLPQWFSEAMSGPMLSSGMCTEVFQFDISPTT-----IVPVYSSAM 526 L GDGSIYREDD +LPQWFSEAMSGPML+SGMCTEVFQFD+SPTT IVPVYS ++ Sbjct: 391 LAPGDGSIYREDDGMLPQWFSEAMSGPMLNSGMCTEVFQFDLSPTTADANGIVPVYSGSV 450 Query: 527 PNTSHNSTENVPSSQSHKVKNRRILHPWPFP 619 NTS N TEN+PS KVKNRRI + P Sbjct: 451 TNTSQNYTENLPSGPVQKVKNRRISYSEAIP 481 Score = 132 bits (332), Expect(2) = 4e-90 Identities = 71/92 (77%), Positives = 76/92 (82%), Gaps = 6/92 (6%) Frame = +1 Query: 604 SMAIPLKGSTSNHTDHLKAHPKN--ESFAGNKPASSVVVSVLADPRV----DADGRISSK 765 S AIPL+GSTSN TDH KA PKN +S AG KP SSVVVSVLADPR D +GRISS Sbjct: 477 SEAIPLRGSTSNDTDHFKAPPKNHSQSHAGRKPVSSVVVSVLADPREASDRDGEGRISSN 536 Query: 766 SLSRIFVVVLVDSVKYVTYSCVLPFKTHSPHL 861 SLSRIFVVVL+DSVKYVTYSCVLPFK+HSPHL Sbjct: 537 SLSRIFVVVLIDSVKYVTYSCVLPFKSHSPHL 568
>AK073142:Os05g0411300 | Length = 646 Score = 97.8 bits (242), Expect = 1e-20 Identities = 54/89 (60%), Positives = 64/89 (71%), Gaps = 5/89 (5%) Frame = +1 Query: 610 AIPLKGSTSNHTDHLKAHPKNES-FAGNKPASSVVVSVLADPRV----DADGRISSKSLS 774 AIPL G T+N+T+ ++ S +KPASSVVVSVLADPR D D R+S K LS Sbjct: 556 AIPLTGKTANNTEPFNRTSESSSKLPDSKPASSVVVSVLADPREAGNGDGDPRVSPKPLS 615 Query: 775 RIFVVVLVDSVKYVTYSCVLPFKTHSPHL 861 +IFVVVLVD V+YVTYSC LPFK+ SPHL Sbjct: 616 KIFVVVLVDGVRYVTYSCTLPFKSSSPHL 644 Score = 82.8 bits (203), Expect = 4e-16 Identities = 71/227 (31%), Positives = 104/227 (45%), Gaps = 13/227 (5%) Frame = +2 Query: 59 DGPRDSVSEGVDSELPHNSSQTLPVLLYIPRNEACEDQWKSGYPVCCCE*ESFFTH-VSP 235 DGP G + HNSS+ LP LLY+PRN + E H S Sbjct: 388 DGP------GKKHQPAHNSSEILPALLYVPRNGKHVKINGNLIIHSVLASEKAVAHKASK 441 Query: 236 DGKSSCNQGQEDTSLAIPGHVAQLNSGEVMESAKAIKNKLMALPAGDGSIYRED----DE 403 D + ++TS+AI + ++LP D + R++ D Sbjct: 442 DDSDQSARDHKETSVAIA--------------------RYLSLPGKD--VNRQETSSADG 479 Query: 404 LLPQWFSEAMSGPMLSSGMCTEVFQFDIS-----PTTIVPVYSSAMPNTSHNSTENVPSS 568 LPQWF E M GP+L+SGMC+EVFQFDIS P I+P S + ++S N+TE +P+ Sbjct: 480 PLPQWFREGMEGPILNSGMCSEVFQFDISTASSNPGGIIPA-SPVVNSSSVNATEKIPAH 538 Query: 569 QS---HKVKNRRILHPWPFP*KVQHPTTLITSKRTPRTRALLETSRP 700 + K+KNRR+++ P + RT + + L S+P Sbjct: 539 SAAYHGKLKNRRVMYNEAIPLTGKTANNTEPFNRTSESSSKLPDSKP 585
>AK058751:Os05g0411300 | Length = 154 Score = 97.8 bits (242), Expect = 1e-20 Identities = 54/89 (60%), Positives = 64/89 (71%), Gaps = 5/89 (5%) Frame = +1 Query: 610 AIPLKGSTSNHTDHLKAHPKNES-FAGNKPASSVVVSVLADPRV----DADGRISSKSLS 774 AIPL G T+N+T+ ++ S +KPASSVVVSVLADPR D D R+S K LS Sbjct: 64 AIPLTGKTANNTEPFNRTSESSSKLPDSKPASSVVVSVLADPREAGNGDGDPRVSPKPLS 123 Query: 775 RIFVVVLVDSVKYVTYSCVLPFKTHSPHL 861 +IFVVVLVD V+YVTYSC LPFK+ SPHL Sbjct: 124 KIFVVVLVDGVRYVTYSCTLPFKSSSPHL 152 Score = 50.1 bits (118), Expect = 3e-06 Identities = 33/94 (35%), Positives = 52/94 (55%), Gaps = 8/94 (8%) Frame = +2 Query: 443 MLSSGMCTEVFQFDIS-----PTTIVPVYSSAMPNTSHNSTENVPSSQS---HKVKNRRI 598 +L+SGMC+EVFQFDIS P I+P S + ++S N+TE +P+ + K+KNRR+ Sbjct: 1 ILNSGMCSEVFQFDISTASSNPGGIIPA-SPVVNSSSVNATEKIPAHSAAYHGKLKNRRV 59 Query: 599 LHPWPFP*KVQHPTTLITSKRTPRTRALLETSRP 700 ++ P + RT + + L S+P Sbjct: 60 MYNEAIPLTGKTANNTEPFNRTSESSSKLPDSKP 93
>AK071931:Os05g0411300 | Length = 408 Score = 80.5 bits (197), Expect = 2e-15 Identities = 66/200 (33%), Positives = 95/200 (47%), Gaps = 13/200 (6%) Frame = +2 Query: 59 DGPRDSVSEGVDSELPHNSSQTLPVLLYIPRNEACEDQWKSGYPVCCCE*ESFFTH-VSP 235 DGP G + HNSS+ LP LLY+PRN + E H S Sbjct: 185 DGP------GKKHQPAHNSSEILPALLYVPRNGKHVKINGNLIIHSVLASEKAVAHKASK 238 Query: 236 DGKSSCNQGQEDTSLAIPGHVAQLNSGEVMESAKAIKNKLMALPAGDGSIYRED----DE 403 D + ++TS+AI + ++LP D + R++ D Sbjct: 239 DDSDQSARDHKETSVAIA--------------------RYLSLPGKD--VNRQETSSADG 276 Query: 404 LLPQWFSEAMSGPMLSSGMCTEVFQFDIS-----PTTIVPVYSSAMPNTSHNSTENVPSS 568 LPQWF E M GP+L+SGMC+EVFQFDIS P I+P S + ++S N+TE +P+ Sbjct: 277 PLPQWFREGMEGPILNSGMCSEVFQFDISTASSNPGGIIPA-SPVVNSSSVNATEKIPAH 335 Query: 569 QS---HKVKNRRILHPWPFP 619 + K+KNRR+++ P Sbjct: 336 SAAYHGKLKNRRVMYNEAIP 355 Score = 69.3 bits (168), Expect = 4e-12 Identities = 44/92 (47%), Positives = 57/92 (61%), Gaps = 8/92 (8%) Frame = +1 Query: 610 AIPLKGSTS-NHTDHLKAHPKNESFAGNKPASSVVVSV---LADPRV----DADGRISSK 765 A P+ S+S N T+ + AH + ++ G V+ + L DPR D D R+S K Sbjct: 317 ASPVVNSSSVNATEKIPAH--SAAYHGKLKNRRVMYNEAIPLTDPREAGNGDGDPRVSPK 374 Query: 766 SLSRIFVVVLVDSVKYVTYSCVLPFKTHSPHL 861 LS+IFVVVLVD V+YVTYSC LPFK+ SPHL Sbjct: 375 PLSKIFVVVLVDGVRYVTYSCTLPFKSSSPHL 406
>AK072274:Os05g0510400 | Length = 412 Score = 29.3 bits (64), Expect = 4.7 Identities = 16/57 (28%), Positives = 31/57 (54%) Frame = +2 Query: 248 SCNQGQEDTSLAIPGHVAQLNSGEVMESAKAIKNKLMALPAGDGSIYREDDELLPQW 418 S + +S +PG V+ + EV+ S K ++ + LPAG+ S+ ++ +L +W Sbjct: 155 SSSSSSSSSSPPLPGDVSHHSPSEVLRSFKELRRLRIELPAGELSM---EEGVLLKW 208
>AK068685:Os05g0510400 | Length = 412 Score = 29.3 bits (64), Expect = 4.7 Identities = 16/57 (28%), Positives = 31/57 (54%) Frame = +2 Query: 248 SCNQGQEDTSLAIPGHVAQLNSGEVMESAKAIKNKLMALPAGDGSIYREDDELLPQW 418 S + +S +PG V+ + EV+ S K ++ + LPAG+ S+ ++ +L +W Sbjct: 155 SSSSSSSSSSPPLPGDVSHHSPSEVLRSFKELRRLRIELPAGELSM---EEGVLLKW 208
>Os08g0511200:Os08g0511200 | Length = 1176 Score = 28.9 bits (63), Expect = 6.1 Identities = 12/32 (37%), Positives = 16/32 (50%) Frame = +3 Query: 474 SSLIYPRPPLFLSTPVLCPIHHITPRRTSPPV 569 SS+ + PP+ P L P HH P PP+ Sbjct: 1041 SSIFHDLPPVPFPNPSLVPFHHDLPTSFHPPL 1072 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 32,017,553 Number of extensions: 786255 Number of successful extensions: 2354 Number of sequences better than 10.0: 7 Number of HSP's gapped: 2344 Number of HSP's successfully gapped: 15 Length of query: 340 Length of database: 15,399,855 Length adjustment: 101 Effective length of query: 239 Effective length of database: 11,355,714 Effective search space: 2714015646 Effective search space used: 2714015646 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
