>Q03306:PKH3_YEAST Serine/threonine-protein kinase PKH3 - Saccharomyces cerevisiae|
           (Baker's yeast)
          Length = 898
 Score = 37.4 bits (85), Expect = 0.099
 Identities = 21/66 (31%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
 Frame = +2

Query: 488 SPTTIVPVYSSAMPNTSHNSTENV---PSSQSHKVKNRRILHPWPFP*KVQHPTTLITSK 658
           +P    P  ++ + NT+ +ST N+   P+SQS++VK  +++ P   P KV      + +K
Sbjct: 389 TPAVTAPNDTNVLTNTAAHSTANIALPPNSQSNQVKRAQLVAPNRIPPKVPVINDNVRNK 448

Query: 659 RTPRTR 676
             PRT+
Sbjct: 449 SIPRTK 454

>Q9KRT4:UGPC_VIBCH sn-glycerol-3-phosphate import ATP-binding protein ugpC - Vibrio|
           cholerae
          Length = 372

 Score = 34.3 bits (77), Expect = 0.84
 Identities = 16/54 (29%), Positives = 33/54 (61%)
 Frame = +2

Query: 17  LGPSQSRHGRVLAVDGPRDSVSEGVDSELPHNSSQTLPVLLYIPRNEACEDQWK 178
           LGP+Q  HG+++ ++  +D ++  V +E+P +  QTLP+ + + +    + Q K
Sbjct: 300 LGPNQLVHGKIIGLESEQDFIA--VTAEIPLDVHQTLPIWVALEQLHLFDQQGK 351

>P53438:SOK2_YEAST Protein SOK2 - Saccharomyces cerevisiae (Baker's yeast)|
          Length = 785

 Score = 33.5 bits (75), Expect = 1.4
 Identities = 20/71 (28%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
 Frame = +1

Query: 568 SIP*GQEQKDFTSMAIPLKGSTSNHTDHLKAHPKNESFAGNKP--ASSVVVSVLADPRVD 741
           ++P  Q  K+  S  +P+   TS  TD +K    +E+   N+P  A  V  S  +  +VD
Sbjct: 706 TVPDNQTLKEPRSSQLPISALTSTDTDKIKTSTSDEATQPNEPSEAEPVKESESSKSQVD 765

Query: 742 ADGRISSKSLS 774
             G +S++ ++
Sbjct: 766 GAGDVSNEEIA 776

>P41922:SEC65_YARLI Signal recognition particle SEC65 subunit - Yarrowia lipolytica|
           (Candida lipolytica)
          Length = 310

 Score = 33.5 bits (75), Expect = 1.4
 Identities = 18/59 (30%), Positives = 29/59 (49%)
 Frame = +2

Query: 575 HKVKNRRILHPWPFP*KVQHPTTLITSKRTPRTRALLETSRPHPWWSLSWPTQEWMPMG 751
           H VKN+R L         +HPT  +T  + P  + +++T+   PW S + P +   P G
Sbjct: 199 HSVKNKRHLFRLIAQYMKEHPTKEVTPYQGPVFQKIIQTNPEFPWNSKNLPPKPQYPRG 257

>Q56B11:PELP1_RAT Proline-, glutamic acid- and leucine-rich protein 1 - Rattus|
           norvegicus (Rat)
          Length = 1130

 Score = 32.7 bits (73), Expect = 2.4
 Identities = 28/94 (29%), Positives = 35/94 (37%), Gaps = 2/94 (2%)
 Frame = +3

Query: 456 ECAPKCSSLIYPRPPLFLSTPVLCPIHHITPRRTSPPVNPIRSRTEGFYIHGHSPKRFNI 635
           E    CS+L +PR P   S+   CP    TP    PP  P   R   F+  G  P    +
Sbjct: 623 EALVTCSALTHPRVPPLQSSGPACP----TPAPVPPPEAPSSFRAPAFHTPGPMPSIGAL 678

Query: 636 -QPH*SPQSAPQERELCWKQAGLIRG-GLCPGRP 731
             P   P + P         AG +   G  P RP
Sbjct: 679 PSPGPVPSAGPIPTVGSMSSAGSVPSTGPVPSRP 712

>Q68ED3:PAPD5_MOUSE PAP-associated domain-containing protein 5 - Mus musculus (Mouse)|
          Length = 633

 Score = 32.7 bits (73), Expect = 2.5
 Identities = 22/62 (35%), Positives = 33/62 (53%)
 Frame = +1

Query: 550 GERPLQSIP*GQEQKDFTSMAIPLKGSTSNHTDHLKAHPKNESFAGNKPASSVVVSVLAD 729
           GERPL  +    EQ+DF    +PL+ + +N+  H  A     + AG  P++S V S  + 
Sbjct: 5   GERPLGGLAVPAEQRDF----LPLETTNNNNNHHQPAAWARRASAG--PSASPVPSAPSS 58

Query: 730 PR 735
           PR
Sbjct: 59  PR 60

>Q8IN94:OSA_DROME Trithorax group protein osa - Drosophila melanogaster (Fruit fly)|
          Length = 2716

 Score = 32.3 bits (72), Expect = 3.2
 Identities = 21/63 (33%), Positives = 29/63 (46%)
 Frame = +3

Query: 552 RTSPPVNPIRSRTEGFYIHGHSPKRFNIQPH*SPQSAPQERELCWKQAGLIRGGLCPGRP 731
           RT PP N  R ++     HG +   +      SPQ   Q+++   +QAG   GG  PG P
Sbjct: 301 RTPPPTNTSRGQSPYPPAHGQNSGSYPS----SPQQQQQQQQQQQQQAGQQPGGPVPGGP 356

Query: 732 KSG 740
             G
Sbjct: 357 PPG 359

>Q8TBF5:PIGX_HUMAN Phosphatidylinositol-glycan biosynthesis class X protein precursor|
           - Homo sapiens (Human)
          Length = 258

 Score = 31.6 bits (70), Expect = 5.5
 Identities = 20/58 (34%), Positives = 30/58 (51%)
 Frame = +2

Query: 77  VSEGVDSELPHNSSQTLPVLLYIPRNEACEDQWKSGYPVCCCE*ESFFTHVSPDGKSS 250
           VSE  D E P+  S+   VL+Y  R+  C D +++  PV C     +    S DG++S
Sbjct: 110 VSENFDIEAPNYLSKESEVLIYARRDSQCIDCFQAFLPVHC----RYHRPHSEDGEAS 163

>P40068:FLO8_YEAST Transcriptional activator FLO8 - Saccharomyces cerevisiae (Baker's|
           yeast)
          Length = 799

 Score = 31.6 bits (70), Expect = 5.5
 Identities = 21/70 (30%), Positives = 37/70 (52%)
 Frame = +2

Query: 470 VFQFDISPTTIVPVYSSAMPNTSHNSTENVPSSQSHKVKNRRILHPWPFP*KVQHPTTLI 649
           V+ + + PTT  PV +    NT++N+T N   S  ++ K+ + +H    P  V  PT+  
Sbjct: 289 VYNYPMQPTTENPVGNPCNNNTTNNTTNN--KSPVNQPKSLKTMHSTDKPNNV--PTSKS 344

Query: 650 TSKRTPRTRA 679
           T  R+  ++A
Sbjct: 345 TRSRSATSKA 354

>P32515:VGLZ_EHV1K Glycoprotein precursor - Equine herpesvirus 1 (strain Kentucky A)|
           (EHV-1) (Equine abortion virus)
          Length = 383

 Score = 31.2 bits (69), Expect = 7.1
 Identities = 19/57 (33%), Positives = 28/57 (49%)
 Frame = +2

Query: 422 SEAMSGPMLSSGMCTEVFQFDISPTTIVPVYSSAMPNTSHNSTENVPSSQSHKVKNR 592
           S + SG   SSG          SPTT  P  SS+ P ++H S+ +  ++Q H   +R
Sbjct: 34  STSGSGQSTSSGTTNS----SSSPTTSPPTTSSSPPTSTHTSSPSTANAQKHAGHHR 86

>Q6S6W0:VGLX_EHV1V Glycoprotein X precursor - Equine herpesvirus 1 (strain V592)|
           (EHV-1) (Equine abortion virus)
          Length = 866

 Score = 31.2 bits (69), Expect = 7.1
 Identities = 28/93 (30%), Positives = 37/93 (39%)
 Frame = +2

Query: 422 SEAMSGPMLSSGMCTEVFQFDISPTTIVPVYSSAMPNTSHNSTENVPSSQSHKVKNRRIL 601
           S + SG   SSG          SPTT  P  SS+ P ++H S+ +  S+QS         
Sbjct: 34  STSGSGQSTSSGTTNS----SSSPTTSPPTTSSSPPTSTHTSSPSSTSTQSSSTAATSSS 89

Query: 602 HPWPFP*KVQHPTTLITSKRTPRTRALLETSRP 700
            P         PT+  TS  T  T     T+ P
Sbjct: 90  APSTASSTTSIPTS--TSTETTTTTPTASTTTP 120

>P28968:VGLX_EHV1B Glycoprotein X precursor - Equine herpesvirus 1 (strain Ab4p)|
           (EHV-1) (Equine abortion virus)
          Length = 797

 Score = 31.2 bits (69), Expect = 7.1
 Identities = 28/93 (30%), Positives = 37/93 (39%)
 Frame = +2

Query: 422 SEAMSGPMLSSGMCTEVFQFDISPTTIVPVYSSAMPNTSHNSTENVPSSQSHKVKNRRIL 601
           S + SG   SSG          SPTT  P  SS+ P ++H S+ +  S+QS         
Sbjct: 34  STSGSGQSTSSGTTNS----SSSPTTSPPTTSSSPPTSTHTSSPSSTSTQSSSTAATSSS 89

Query: 602 HPWPFP*KVQHPTTLITSKRTPRTRALLETSRP 700
            P         PT+  TS  T  T     T+ P
Sbjct: 90  APSTASSTTSIPTS--TSTETTTTTPTASTTTP 120

>P33375:MBHS_ALCHY Uptake hydrogenase small subunit precursor - Alcaligenes|
           hydrogenophilus
          Length = 363

 Score = 31.2 bits (69), Expect = 7.1
 Identities = 21/59 (35%), Positives = 25/59 (42%), Gaps = 4/59 (6%)
 Frame = +2

Query: 173 WKSGYPVCCCE*ESFFTHVSPDGK----SSCNQGQEDTSLAIPGHVAQLNSGEVMESAK 337
           W  G    CC  ESF     P  K    S  +   +DT +A  GH A+   GEVM   K
Sbjct: 54  WLHGLECTCCS-ESFIRSAHPLAKDVVLSMISLDYDDTLMAAAGHQAEAILGEVMTKYK 111

>P46694:IEX1_MOUSE Radiation-inducible immediate-early gene IEX-1 - Mus musculus|
           (Mouse)
          Length = 153

 Score = 31.2 bits (69), Expect = 7.1
 Identities = 17/58 (29%), Positives = 29/58 (50%)
 Frame = +2

Query: 434 SGPMLSSGMCTEVFQFDISPTTIVPVYSSAMPNTSHNSTENVPSSQSHKVKNRRILHP 607
           +GP L  G   E+F FD             +P  +  ST  + +S+ H+ ++RR+L+P
Sbjct: 23  TGPELRRGSGPEIFTFD------------PLPERAVVSTARLNTSRGHRKRSRRVLYP 68

>Q63661:MUC4_RAT Mucin-4 precursor - Rattus norvegicus (Rat)|
          Length = 2344

 Score = 30.8 bits (68), Expect = 9.3
 Identities = 28/83 (33%), Positives = 37/83 (44%), Gaps = 1/83 (1%)
 Frame = -3

Query: 950  TQNINSFVNNSSPVNRHNLNTHRSGENSAQR*GLWVLNGRTHE*VTYFTLSTRTTTNIRD 771
            T   +S V+N+SP     L    S E++          G T    T    ST TTT +  
Sbjct: 839  TNPTSSGVSNTSPATTEVLTPTSSPESTP---------GNTAPRTT--ETSTTTTTKVLM 887

Query: 770  NDFEEILPSASTLG-SARTETTT 705
               ++ LP+ STLG S  TE TT
Sbjct: 888  TSLQQKLPTGSTLGTSTPTEVTT 910


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 197,597,415
Number of extensions: 4681134
Number of successful extensions: 11452
Number of sequences better than 10.0: 15
Number of HSP's gapped: 11437
Number of HSP's successfully gapped: 15
Length of query: 340
Length of database: 100,686,439
Length adjustment: 114
Effective length of query: 226
Effective length of database: 69,416,809
Effective search space: 15688198834
Effective search space used: 15688198834
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)