ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf132d03 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | Os03g0149200:Os03g0149200 | 124 | 3e-28 | 2 | AK073158:Os10g0445500 | 108 | 1e-23 | 3 | AK059279:Os10g0445500 | 108 | 1e-23 | 4 | Os04g0181100:Os04g0181100 | 106 | 6e-23 | 5 | AK105067:Os01g0107000 | 32 | 1.4 | 6 | AK066969:Os01g0107000 | 32 | 1.4 | 7 | AK065017:Os01g0673500 | 31 | 3.2 | 8 | AK072445:Os02g0564200 | 30 | 5.5 | 9 | AK059007:Os02g0564200 | 30 | 5.5 | 10 | Os02g0250300:Os02g0250300 | 29 | 9.3 |
|---|
>Os03g0149200:Os03g0149200 | Length = 157 Score = 124 bits (310), Expect = 3e-28 Identities = 69/122 (56%), Positives = 81/122 (66%), Gaps = 1/122 (0%) Frame = +1 Query: 85 MGFVSFAGRVLFASVFLLSAYQEFTEFGSDGGPAAKNLQPKFKSFTKNISVHLGVVVPHV 264 MGFVSFAGRVLFASVFLLSAYQEF+EFG+DGGPAAK L+PK+ FTKNIS HLGV VPHV Sbjct: 1 MGFVSFAGRVLFASVFLLSAYQEFSEFGADGGPAAKALRPKYNVFTKNISAHLGVAVPHV 60 Query: 265 ELKHVIAATXXXXXXXXXXXXXXXXXXAYLLVCTGLLLRLHNNFIV-VIYTFTFISMHIA 441 ELKH++AAT AYLL+ ++ FI V+Y F M + Sbjct: 61 ELKHIVAATIGLKGLGGLLFILSSSFGAYLLL-------IYLAFITPVVYDFYNYDMEKS 113 Query: 442 KF 447 +F Sbjct: 114 EF 115 Score = 73.9 bits (180), Expect = 3e-13 Identities = 38/65 (58%), Positives = 46/65 (70%) Frame = +2 Query: 1238 FVSVTS**SYLLRQALYLAFITPVMYDFYNYDMEKAEFVQIFMKFTQNXXXXXXXXXXXX 1417 F+ +S +YLL +YLAFITPV+YDFYNYDMEK+EFVQ+FMKFTQN Sbjct: 80 FILSSSFGAYLL--LIYLAFITPVVYDFYNYDMEKSEFVQLFMKFTQNLALFGALLFFLG 137 Query: 1418 MKNSV 1432 MKNS+ Sbjct: 138 MKNSI 142
>AK073158:Os10g0445500 | Length = 158 Score = 108 bits (270), Expect = 1e-23 Identities = 61/122 (50%), Positives = 74/122 (60%), Gaps = 1/122 (0%) Frame = +1 Query: 85 MGFVSFAGRVLFASVFLLSAYQEFTEFGSDGGPAAKNLQPKFKSFTKNISVHLGVVVPHV 264 MGF+SFAGRVLFA+ FLLSAYQEF+EFG DGGPAAK LQPKF + NIS G+VVPH+ Sbjct: 1 MGFLSFAGRVLFAAAFLLSAYQEFSEFGVDGGPAAKALQPKFNTIVANISTRTGLVVPHI 60 Query: 265 ELKHVIAATXXXXXXXXXXXXXXXXXXAYLLVCTGLLLRLHNNFIV-VIYTFTFISMHIA 441 ELKH++AA AYLL+ H FI V++ F + A Sbjct: 61 ELKHIVAAMISLKGLGGLLFILSSSLGAYLLL-------FHLAFITPVVHDFYNYDIESA 113 Query: 442 KF 447 +F Sbjct: 114 EF 115 Score = 62.8 bits (151), Expect = 8e-10 Identities = 33/65 (50%), Positives = 42/65 (64%) Frame = +2 Query: 1238 FVSVTS**SYLLRQALYLAFITPVMYDFYNYDMEKAEFVQIFMKFTQNXXXXXXXXXXXX 1417 F+ +S +YLL +LAFITPV++DFYNYD+E AEFVQ+F KF QN Sbjct: 80 FILSSSLGAYLL--LFHLAFITPVVHDFYNYDIESAEFVQLFTKFAQNCALVGALLFFLA 137 Query: 1418 MKNSV 1432 MKNS+ Sbjct: 138 MKNSI 142
>AK059279:Os10g0445500 | Length = 158 Score = 108 bits (270), Expect = 1e-23 Identities = 61/122 (50%), Positives = 74/122 (60%), Gaps = 1/122 (0%) Frame = +1 Query: 85 MGFVSFAGRVLFASVFLLSAYQEFTEFGSDGGPAAKNLQPKFKSFTKNISVHLGVVVPHV 264 MGF+SFAGRVLFA+ FLLSAYQEF+EFG DGGPAAK LQPKF + NIS G+VVPH+ Sbjct: 1 MGFLSFAGRVLFAAAFLLSAYQEFSEFGVDGGPAAKALQPKFNTIVANISTRTGLVVPHI 60 Query: 265 ELKHVIAATXXXXXXXXXXXXXXXXXXAYLLVCTGLLLRLHNNFIV-VIYTFTFISMHIA 441 ELKH++AA AYLL+ H FI V++ F + A Sbjct: 61 ELKHIVAAMISLKGLGGLLFILSSSLGAYLLL-------FHLAFITPVVHDFYNYDIESA 113 Query: 442 KF 447 +F Sbjct: 114 EF 115 Score = 62.8 bits (151), Expect = 8e-10 Identities = 33/65 (50%), Positives = 42/65 (64%) Frame = +2 Query: 1238 FVSVTS**SYLLRQALYLAFITPVMYDFYNYDMEKAEFVQIFMKFTQNXXXXXXXXXXXX 1417 F+ +S +YLL +LAFITPV++DFYNYD+E AEFVQ+F KF QN Sbjct: 80 FILSSSLGAYLL--LFHLAFITPVVHDFYNYDIESAEFVQLFTKFAQNCALVGALLFFLA 137 Query: 1418 MKNSV 1432 MKNS+ Sbjct: 138 MKNSI 142
>Os04g0181100:Os04g0181100 | Length = 157 Score = 106 bits (264), Expect = 6e-23 Identities = 49/69 (71%), Positives = 60/69 (86%) Frame = +1 Query: 85 MGFVSFAGRVLFASVFLLSAYQEFTEFGSDGGPAAKNLQPKFKSFTKNISVHLGVVVPHV 264 MGF+SF GRVLFAS+FLLSAYQEF+EFG+DGGPAAK L+PKF FT+ +S LG+ VPH+ Sbjct: 1 MGFISFVGRVLFASIFLLSAYQEFSEFGTDGGPAAKALKPKFNLFTQQVSKSLGMAVPHI 60 Query: 265 ELKHVIAAT 291 ++K VIAAT Sbjct: 61 DIKTVIAAT 69 Score = 62.8 bits (151), Expect = 8e-10 Identities = 28/50 (56%), Positives = 36/50 (72%) Frame = +2 Query: 1283 LYLAFITPVMYDFYNYDMEKAEFVQIFMKFTQNXXXXXXXXXXXXMKNSV 1432 LYLA ITPV+YDFYNY+ME ++FVQ+F+KF+QN MKNS+ Sbjct: 93 LYLAVITPVVYDFYNYEMESSQFVQLFVKFSQNLALFGALLFFLGMKNSI 142
>AK105067:Os01g0107000 | Length = 223 Score = 32.0 bits (71), Expect = 1.4 Identities = 16/40 (40%), Positives = 24/40 (60%) Frame = -1 Query: 1524 VKHLRPQLSWLREML*VVLDLGAFFLACLLGTEFFMPRKK 1405 V H +PQLSW R ++ V + LG A ++ + F+PR K Sbjct: 125 VPHAQPQLSWSRTLIGVGVFLGVGASAAVILKKLFVPRLK 164
>AK066969:Os01g0107000 | Length = 454 Score = 32.0 bits (71), Expect = 1.4 Identities = 16/40 (40%), Positives = 24/40 (60%) Frame = -1 Query: 1524 VKHLRPQLSWLREML*VVLDLGAFFLACLLGTEFFMPRKK 1405 V H +PQLSW R ++ V + LG A ++ + F+PR K Sbjct: 125 VPHAQPQLSWSRTLIGVGVFLGVGASAAVILKKLFVPRLK 164
>AK065017:Os01g0673500 | Length = 370 Score = 30.8 bits (68), Expect = 3.2 Identities = 19/65 (29%), Positives = 26/65 (40%) Frame = +1 Query: 22 ELPRSRRGSPLPHRIPPPPVDMGFVSFAGRVLFASVFLLSAYQEFTEFGSDGGPAAKNLQ 201 E+ +RR P P P PP D+ +F L E + GP K+L Sbjct: 10 EVAATRRLDPAPRAAPAPPADL--------AVFEQFERLERKVELRNGAIEAGPPQKSLL 61 Query: 202 PKFKS 216 P F+S Sbjct: 62 PSFES 66
>AK072445:Os02g0564200 | Length = 172 Score = 30.0 bits (66), Expect = 5.5 Identities = 18/30 (60%), Positives = 20/30 (66%), Gaps = 4/30 (13%) Frame = +1 Query: 7 HHRFRELPRSRRGS---PLPH-RIPPPPVD 84 H R R+LPR RRG PLP R PPPP+D Sbjct: 60 HRRLRDLPR-RRGRLQPPLPPLRRPPPPLD 88
>AK059007:Os02g0564200 | Length = 111 Score = 30.0 bits (66), Expect = 5.5 Identities = 18/30 (60%), Positives = 20/30 (66%), Gaps = 4/30 (13%) Frame = +1 Query: 7 HHRFRELPRSRRGS---PLPH-RIPPPPVD 84 H R R+LPR RRG PLP R PPPP+D Sbjct: 55 HRRLRDLPR-RRGRLQPPLPPLRRPPPPLD 83
>Os02g0250300:Os02g0250300 | Length = 656 Score = 29.3 bits (64), Expect = 9.3 Identities = 9/16 (56%), Positives = 14/16 (87%) Frame = +1 Query: 49 PLPHRIPPPPVDMGFV 96 PLP++ PPPP+D+ F+ Sbjct: 428 PLPNKFPPPPIDVRFL 443 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 47,397,307 Number of extensions: 1058331 Number of successful extensions: 3220 Number of sequences better than 10.0: 10 Number of HSP's gapped: 3212 Number of HSP's successfully gapped: 14 Length of query: 590 Length of database: 15,399,855 Length adjustment: 106 Effective length of query: 484 Effective length of database: 11,155,509 Effective search space: 5399266356 Effective search space used: 5399266356 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
