| Clone Name | FLbaf139j11 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_001050936.1| Oryza sativa (japonica cultivar-group) Os01g0773600 (Os01g0773600) mRNA, complete cds Length = 2485 Score = 1582 bits (798), Expect = 0.0 Identities = 1221/1362 (89%) Strand = Plus / Plus Query: 171 ggcgtcacgcctaccgaggcgctccggctacgcgacgaggtgaaagatatgttttatcat 230 ||||||||||| ||||||| | |||||| ||||||||||| ||||||||||| |||||| Sbjct: 168 ggcgtcacgccctccgaggcccgccggctccgcgacgaggtcaaagatatgttctatcat 227 Query: 231 gcatttgatgggtacatgcaacatgcttttccacttgatgaactgcgaccgttgagttgt 290 |||||||||||||||||||||||||||||||||||||||||| |||| || || ||||| Sbjct: 228 gcatttgatgggtacatgcaacatgcttttccacttgatgaattgcggcctttaagttgc 287 Query: 291 caaggggaagactcccttggtggttatgcacttactcttatcgactctttggatactctg 350 ||||| ||||| || |||||||| ||||||||||||||||| |||||||||||||| || Sbjct: 288 caaggagaagattcacttggtggctatgcacttactcttatagactctttggataccttg 347 Query: 351 gctttactaggtgataaggagagatttgctgctggtgtggagtgggttggtaagaacgtc 410 ||||||||||| |||||||||||||||| ||||| |||||||||||||||||||| ||| Sbjct: 348 gctttactaggggataaggagagatttgatgctgccgtggagtgggttggtaagaatgtc 407 Query: 411 cgctttgatatcaacaaaactgtctcagttttcgagaccaatatacgtatccttggcggt 470 ||||||||||| || ||||||||||| ||||| || ||||| ||||| || ||||| ||| Sbjct: 408 cgctttgatattaataaaactgtctctgtttttgaaaccaacatacgcattcttgggggt 467 Query: 471 ctgttatcagctcacttgattgccagtgactatgccactggtatgaagattgagtcttat 530 ||| ||||||||||| ||||||||||||| ||||| ||||| |||| ||| | |||||| Sbjct: 468 ctgctatcagctcacctgattgccagtgattatgcaactggaatgagaattcaatcttat 527 Query: 531 gatgatcagttacttcatttggccgctgacttagcccagaggttattacctgcatttgac 590 ||||||||||| |||||||| || ||||||||||| || || || |||||||||||||| Sbjct: 528 gatgatcagttgcttcatttagcggctgacttagctcaaagattgctacctgcatttgac 587 Query: 591 actcctacaggtattccatttggatctgttaatttactgtatggagtcgatgatgatgaa 650 ||||| |||||||||||||||||||| || |||||| |||||||||||||||| ||||| Sbjct: 588 actccaacaggtattccatttggatcagtaaatttattgtatggagtcgatgaaaatgaa 647 Query: 651 agcaagataacatcgacggctggtggtggcactttgacattggagttcggtgtcttgagt 710 ||||||||||| || || ||||||||||||||||||||| |||| || |||||| ||||| Sbjct: 648 agcaagataacttcaacagctggtggtggcactttgacactggaatttggtgtcctgagt 707 Query: 711 cggttgactaataacactgtttttgagcaagttaccaaaaattcagtgcgtgggatatgg 770 || ||||||||| | | |||| ||| | |||||| ||||| || |||||||| |||||| Sbjct: 708 cgtttgactaatgatagcgtttatgaacgagttacaaaaaactctgtgcgtggaatatgg 767 Query: 771 gcacgcaggtcaaaactcaaccttgttggagcccatataaatgtcttcactggtgaatgg 830 ||||||||||| ||||| |||||||||| |||||||||||||| || |||||||||||| Sbjct: 768 gcacgcaggtcgaaacttgaccttgttggtgcccatataaatgtatttactggtgaatgg 827 Query: 831 acacaaaaggatgcaggaatcggcacaagcatcgactcattctacgaatatcttctgaag 890 ||||| |||||||||||||| ||||||||||| ||||||||||| || |||||||| ||| Sbjct: 828 acacagaaggatgcaggaattggcacaagcattgactcattctatgagtatcttctaaag 887 Query: 891 gcatatttattgttcggagatgaagaatacttgtatgtatttgaagaggcttacaaggct 950 || |||||||| || |||||||||||||| |||||| ||||| | ||||||||||||||| Sbjct: 888 gcgtatttattatttggagatgaagaatatttgtatatatttcaggaggcttacaaggct 947 Query: 951 gccatgcactacctccaccatgatccttggtatattgaggtaaatatgaattctggtgct 1010 |||||||| || ||||| |||||||| |||||| | |||||||||||||||||||||||| Sbjct: 948 gccatgcattatctccatcatgatccctggtatgtggaggtaaatatgaattctggtgct 1007 Query: 1011 actgtttggccactattcaatagtctgcaggcattctggccaggacttcaggttttagct 1070 |||||||||||||||||||| ||||| |||||||||||||||||||||||||| |||||| Sbjct: 1008 actgtttggccactattcaacagtctccaggcattctggccaggacttcaggtgttagct 1067 Query: 1071 ggagatgtcgatcctgccattcgaacacatgctgccttctttagcgtctggaaaaaatat 1130 |||||||| ||||||||||||||||| |||||||||||||| || || |||||||||||| Sbjct: 1068 ggagatgttgatcctgccattcgaactcatgctgccttcttcagtgtatggaaaaaatat 1127 Query: 1131 gggttcactccagaagggtttaatctcgctacatctactgttcagaatggacaacggagc 1190 || ||||| ||||||||||||||||| |||||||| |||||||||||||||||| ||||| Sbjct: 1128 ggcttcaccccagaagggtttaatcttgctacatccactgttcagaatggacaaaggagc 1187 Query: 1191 tacccgctgcggcctgagttgattgaaagcacatattggctattcaaggctaccagagat 1250 ||||||||||||||||| ||||||||||||||||||||||| ||||||||||| |||||| Sbjct: 1188 tacccgctgcggcctgaattgattgaaagcacatattggctgttcaaggctactagagat 1247 Query: 1251 tttaggtaccttgatgttggaagggacatactagcaagccttcaatatgctgctaaatgt 1310 | |||||||||||||||||||||||| ||| |||||||||||||||||| |||||||||| Sbjct: 1248 tataggtaccttgatgttggaagggatatattagcaagccttcaatatggtgctaaatgt 1307 Query: 1311 ccttgtggctactgccacatatcagatgtggaaacccacaagcaggatgaccacatggag 1370 || ||||| |||||||| || |||||||| ||||||||| |||||||||||||||||||| Sbjct: 1308 ccatgtggttactgccatatttcagatgtagaaacccaccagcaggatgaccacatggag 1367 Query: 1371 agttttttccttgcagaaacggtaaaatatctctggcttctttttgatttagctgtaggc 1430 |||||||||||||||||||| || ||||||||||||||||||||||||||||||| |||| Sbjct: 1368 agttttttccttgcagaaacagtcaaatatctctggcttctttttgatttagctgcaggc 1427 Query: 1431 cctgataacattgttgaaaatgggccttataaatacatattcagcacagaaggccatttg 1490 |||||||| ||||||||||||||||| |||||||||||||| || |||||||| ||| || Sbjct: 1428 cctgataatattgttgaaaatgggccatataaatacatatttagtacagaaggtcatctg 1487 Query: 1491 ttacctgctactcccgaaatatccttggtagatgagcattgc 1532 || ||||||||||| | ||| ||||| |||||||||||||| Sbjct: 1488 ttgcctgctactcctcagataaccttgttagatgagcattgc 1529 Score = 111 bits (56), Expect = 1e-20 Identities = 74/80 (92%) Strand = Plus / Plus Query: 1665 tccaatgttttgtctacaacaagaggttacatcaagggagtttgtccaggattgagtcat 1724 |||||| |||||||||| |||||||| |||||||||||||||||||||||||| | |||| Sbjct: 1659 tccaatattttgtctacgacaagagggtacatcaagggagtttgtccaggattaactcat 1718 Query: 1725 gcacagaaacttggcatatc 1744 || ||||||||||||||||| Sbjct: 1719 gcccagaaacttggcatatc 1738 Score = 56.0 bits (28), Expect = 6e-04 Identities = 52/60 (86%) Strand = Plus / Plus Query: 1813 aatccagtgtccagattcaatcaagttctgtgatattgatctctcatccagccacaagcc 1872 ||||||||||||| ||||||||||||||| |||||||| || ||||||| | |||||| Sbjct: 1816 aatccagtgtccaagctcaatcaagttctgttatattgatatcgcatccagtcgcaagcc 1875
>dbj|AK067004.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013091F09, full insert sequence Length = 2485 Score = 1566 bits (790), Expect = 0.0 Identities = 1220/1362 (89%), Gaps = 1/1362 (0%) Strand = Plus / Plus Query: 171 ggcgtcacgcctaccgaggcgctccggctacgcgacgaggtgaaagatatgttttatcat 230 ||||||||||| ||||||| | |||||| ||||||||||| ||||||||||| |||||| Sbjct: 169 ggcgtcacgccctccgaggcccgccggctccgcgacgaggtcaaagatatgttctatcat 228 Query: 231 gcatttgatgggtacatgcaacatgcttttccacttgatgaactgcgaccgttgagttgt 290 |||||||||||||||||||||||||||||||||||||||||| |||| || || ||||| Sbjct: 229 gcatttgatgggtacatgcaacatgcttttccacttgatgaattgcggcctttaagttgc 288 Query: 291 caaggggaagactcccttggtggttatgcacttactcttatcgactctttggatactctg 350 ||||| ||||| || |||||||| ||||||||||||||||| |||||||||||||| || Sbjct: 289 caaggagaagattcacttggtggctatgcacttactcttatagactctttggataccttg 348 Query: 351 gctttactaggtgataaggagagatttgctgctggtgtggagtgggttggtaagaacgtc 410 ||||||||||| |||||||||||||||| ||||| |||||||||||||||||||| ||| Sbjct: 349 gctttactaggggataaggagagatttgatgctgccgtggagtgggttggtaagaatgtc 408 Query: 411 cgctttgatatcaacaaaactgtctcagttttcgagaccaatatacgtatccttggcggt 470 ||||||||||| || ||||||||||| ||||| || ||||| ||||| || ||||| ||| Sbjct: 409 cgctttgatattaataaaactgtctctgtttttgaaaccaacatacgcattcttgggggt 468 Query: 471 ctgttatcagctcacttgattgccagtgactatgccactggtatgaagattgagtcttat 530 ||| ||||||||||| ||||||||||||| ||||| ||||| |||| ||| | |||||| Sbjct: 469 ctgctatcagctcacctgattgccagtgattatgcaactggaatgagaattcaatcttat 528 Query: 531 gatgatcagttacttcatttggccgctgacttagcccagaggttattacctgcatttgac 590 ||||||||||| |||||||| || ||||||||||| || || || |||||||||||||| Sbjct: 529 gatgatcagttgcttcatttagcggctgacttagctcaaagattgctacctgcatttgac 588 Query: 591 actcctacaggtattccatttggatctgttaatttactgtatggagtcgatgatgatgaa 650 ||||| |||||||||||||||||||| || |||||| |||||||||||||||| ||||| Sbjct: 589 actccaacaggtattccatttggatcagtaaatttattgtatggagtcgatgaaaatgaa 648 Query: 651 agcaagataacatcgacggctggtggtggcactttgacattggagttcggtgtcttgagt 710 ||||||||||| || || ||||||||||||||||||||| |||| || |||||| ||||| Sbjct: 649 agcaagataacttcaacagctggtggtggcactttgacactggaatttggtgtcctgagt 708 Query: 711 cggttgactaataacactgtttttgagcaagttaccaaaaattcagtgcgtgggatatgg 770 || ||||||||| | | |||| ||| | |||||| ||||| || |||||||| |||||| Sbjct: 709 cgtttgactaatgatagcgtttatgaacgagttacaaaaaactctgtgcgtggaatatgg 768 Query: 771 gcacgcaggtcaaaactcaaccttgttggagcccatataaatgtcttcactggtgaatgg 830 ||||||||||| ||||| |||||||||| |||||||||||||| || |||||||||||| Sbjct: 769 gcacgcaggtcgaaacttgaccttgttggtgcccatataaatgtatttactggtgaatgg 828 Query: 831 acacaaaaggatgcaggaatcggcacaagcatcgactcattctacgaatatcttctgaag 890 ||||| |||||||||||||| ||||||||||| ||||||||||| || |||||||| ||| Sbjct: 829 acacagaaggatgcaggaattggcacaagcattgactcattctatgagtatcttctaaag 888 Query: 891 gcatatttattgttcggagatgaagaatacttgtatgtatttgaagaggcttacaaggct 950 || |||||||| || |||||||||||||| |||||| ||||| | ||||||||||||||| Sbjct: 889 gcgtatttattatttggagatgaagaatatttgtatatatttcaggaggcttacaaggct 948 Query: 951 gccatgcactacctccaccatgatccttggtatattgaggtaaatatgaattctggtgct 1010 |||||||| || ||||| |||||||| |||||| | |||||||||||||||||||||||| Sbjct: 949 gccatgcattatctccatcatgatccctggtatgtggaggtaaatatgaattctggtgct 1008 Query: 1011 actgtttggccactattcaatagtctgcaggcattctggccaggacttcaggttttagct 1070 |||||||||||||||||||| ||||| |||||||||||||||||||||||||| |||||| Sbjct: 1009 actgtttggccactattcaacagtctccaggcattctggccaggacttcaggtgttagct 1068 Query: 1071 ggagatgtcgatcctgccattcgaacacatgctgccttctttagcgtctggaaaaaatat 1130 |||||||| ||||||||||||||||| |||||||||||||| || || |||||||||||| Sbjct: 1069 ggagatgttgatcctgccattcgaactcatgctgccttcttcagtgtatggaaaaaatat 1128 Query: 1131 gggttcactccagaagggtttaatctcgctacatctactgttcagaatggacaacggagc 1190 || ||||| ||||||||| ||||||| |||||||| |||||||||||||||||| ||||| Sbjct: 1129 ggcttcaccccagaaggg-ttaatcttgctacatccactgttcagaatggacaaaggagc 1187 Query: 1191 tacccgctgcggcctgagttgattgaaagcacatattggctattcaaggctaccagagat 1250 ||||||||||||||||| ||||||||||||||||||||||| ||||||||||| |||||| Sbjct: 1188 tacccgctgcggcctgaattgattgaaagcacatattggctgttcaaggctactagagat 1247 Query: 1251 tttaggtaccttgatgttggaagggacatactagcaagccttcaatatgctgctaaatgt 1310 | |||||||||||||||||||||||| ||| |||||||||||||||||| |||||||||| Sbjct: 1248 tataggtaccttgatgttggaagggatatattagcaagccttcaatatggtgctaaatgt 1307 Query: 1311 ccttgtggctactgccacatatcagatgtggaaacccacaagcaggatgaccacatggag 1370 || ||||| |||||||| || |||||||| ||||||||| |||||||||||||||||||| Sbjct: 1308 ccatgtggttactgccatatttcagatgtagaaacccaccagcaggatgaccacatggag 1367 Query: 1371 agttttttccttgcagaaacggtaaaatatctctggcttctttttgatttagctgtaggc 1430 |||||||||||||||||||| || ||||||||||||||||||||||||||||||| |||| Sbjct: 1368 agttttttccttgcagaaacagtcaaatatctctggcttctttttgatttagctgcaggc 1427 Query: 1431 cctgataacattgttgaaaatgggccttataaatacatattcagcacagaaggccatttg 1490 |||||||| ||||||||||||||||| |||||||||||||| || |||||||| ||| || Sbjct: 1428 cctgataatattgttgaaaatgggccatataaatacatatttagtacagaaggtcatctg 1487 Query: 1491 ttacctgctactcccgaaatatccttggtagatgagcattgc 1532 || ||||||||||| | ||| ||||| |||||||||||||| Sbjct: 1488 ttgcctgctactcctcagataaccttgttagatgagcattgc 1529 Score = 111 bits (56), Expect = 1e-20 Identities = 74/80 (92%) Strand = Plus / Plus Query: 1665 tccaatgttttgtctacaacaagaggttacatcaagggagtttgtccaggattgagtcat 1724 |||||| |||||||||| |||||||| |||||||||||||||||||||||||| | |||| Sbjct: 1659 tccaatattttgtctacgacaagagggtacatcaagggagtttgtccaggattaactcat 1718 Query: 1725 gcacagaaacttggcatatc 1744 || ||||||||||||||||| Sbjct: 1719 gcccagaaacttggcatatc 1738 Score = 56.0 bits (28), Expect = 6e-04 Identities = 52/60 (86%) Strand = Plus / Plus Query: 1813 aatccagtgtccagattcaatcaagttctgtgatattgatctctcatccagccacaagcc 1872 ||||||||||||| ||||||||||||||| |||||||| || ||||||| | |||||| Sbjct: 1816 aatccagtgtccaagctcaatcaagttctgttatattgatatcgcatccagtcgcaagcc 1875
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 200 bits (101), Expect = 2e-47 Identities = 128/137 (93%) Strand = Plus / Plus Query: 1254 aggtaccttgatgttggaagggacatactagcaagccttcaatatgctgctaaatgtcct 1313 ||||||||||||||||||||||| ||| |||||||||||||||||| |||||||||||| Sbjct: 32699747 aggtaccttgatgttggaagggatatattagcaagccttcaatatggtgctaaatgtcca 32699806 Query: 1314 tgtggctactgccacatatcagatgtggaaacccacaagcaggatgaccacatggagagt 1373 ||||| |||||||| || |||||||| ||||||||| ||||||||||||||||||||||| Sbjct: 32699807 tgtggttactgccatatttcagatgtagaaacccaccagcaggatgaccacatggagagt 32699866 Query: 1374 tttttccttgcagaaac 1390 ||||||||||||||||| Sbjct: 32699867 tttttccttgcagaaac 32699883 Score = 155 bits (78), Expect = 9e-34 Identities = 111/122 (90%) Strand = Plus / Plus Query: 208 aggtgaaagatatgttttatcatgcatttgatgggtacatgcaacatgcttttccacttg 267 |||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 32693165 aggtcaaagatatgttctatcatgcatttgatgggtacatgcaacatgcttttccacttg 32693224 Query: 268 atgaactgcgaccgttgagttgtcaaggggaagactcccttggtggttatgcacttactc 327 ||||| |||| || || ||||| ||||| ||||| || |||||||| ||||||||||||| Sbjct: 32693225 atgaattgcggcctttaagttgccaaggagaagattcacttggtggctatgcacttactc 32693284 Query: 328 tt 329 || Sbjct: 32693285 tt 32693286 Score = 151 bits (76), Expect = 1e-32 Identities = 106/116 (91%) Strand = Plus / Plus Query: 1060 aggttttagctggagatgtcgatcctgccattcgaacacatgctgccttctttagcgtct 1119 |||| |||||||||||||| ||||||||||||||||| |||||||||||||| || || | Sbjct: 32698678 aggtgttagctggagatgttgatcctgccattcgaactcatgctgccttcttcagtgtat 32698737 Query: 1120 ggaaaaaatatgggttcactccagaagggtttaatctcgctacatctactgttcag 1175 ||||||||||||| ||||| ||||||||||||||||| |||||||| ||||||||| Sbjct: 32698738 ggaaaaaatatggcttcaccccagaagggtttaatcttgctacatccactgttcag 32698793 Score = 141 bits (71), Expect = 1e-29 Identities = 77/79 (97%) Strand = Plus / Plus Query: 987 gaggtaaatatgaattctggtgctactgtttggccactattcaatagtctgcaggcattc 1046 |||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||| Sbjct: 32698525 gaggtaaatatgaattctggtgctactgtttggccactattcaacagtctccaggcattc 32698584 Query: 1047 tggccaggacttcaggttt 1065 ||||||||||||||||||| Sbjct: 32698585 tggccaggacttcaggttt 32698603 Score = 129 bits (65), Expect = 5e-26 Identities = 80/85 (94%) Strand = Plus / Plus Query: 1173 cagaatggacaacggagctacccgctgcggcctgagttgattgaaagcacatattggcta 1232 |||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 32699012 cagaatggacaaaggagctacccgctgcggcctgaattgattgaaagcacatattggctg 32699071 Query: 1233 ttcaaggctaccagagattttaggt 1257 ||||||||||| ||||||| ||||| Sbjct: 32699072 ttcaaggctactagagattataggt 32699096 Score = 121 bits (61), Expect = 1e-23 Identities = 82/89 (92%) Strand = Plus / Plus Query: 333 gactctttggatactctggctttactaggtgataaggagagatttgctgctggtgtggag 392 |||||||||||||| ||||||||||||| |||||||||||||||| ||||| |||||| Sbjct: 32693385 gactctttggataccttggctttactaggggataaggagagatttgatgctgccgtggag 32693444 Query: 393 tgggttggtaagaacgtccgctttgatat 421 |||||||||||||| |||||||||||||| Sbjct: 32693445 tgggttggtaagaatgtccgctttgatat 32693473 Score = 113 bits (57), Expect = 3e-21 Identities = 90/101 (89%) Strand = Plus / Plus Query: 740 agttaccaaaaattcagtgcgtgggatatgggcacgcaggtcaaaactcaaccttgttgg 799 |||||| ||||| || |||||||| ||||||||||||||||| ||||| |||||||||| Sbjct: 32697083 agttacaaaaaactctgtgcgtggaatatgggcacgcaggtcgaaacttgaccttgttgg 32697142 Query: 800 agcccatataaatgtcttcactggtgaatggacacaaaagg 840 |||||||||||||| || ||||||||||||||||| |||| Sbjct: 32697143 tgcccatataaatgtatttactggtgaatggacacagaagg 32697183 Score = 111 bits (56), Expect = 1e-20 Identities = 65/68 (95%) Strand = Plus / Plus Query: 1395 aaatatctctggcttctttttgatttagctgtaggccctgataacattgttgaaaatggg 1454 ||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||| Sbjct: 32700213 aaatatctctggcttctttttgatttagctgcaggccctgataatattgttgaaaatggg 32700272 Query: 1455 ccttataa 1462 || ||||| Sbjct: 32700273 ccatataa 32700280 Score = 99.6 bits (50), Expect = 4e-17 Identities = 83/94 (88%) Strand = Plus / Plus Query: 889 aggcatatttattgttcggagatgaagaatacttgtatgtatttgaagaggcttacaagg 948 |||| |||||||| || |||||||||||||| |||||| ||||| | ||||||||||||| Sbjct: 32698152 aggcgtatttattatttggagatgaagaatatttgtatatatttcaggaggcttacaagg 32698211 Query: 949 ctgccatgcactacctccaccatgatccttggta 982 |||||||||| || ||||| |||||||| ||||| Sbjct: 32698212 ctgccatgcattatctccatcatgatccctggta 32698245 Score = 83.8 bits (42), Expect = 3e-12 Identities = 69/78 (88%) Strand = Plus / Plus Query: 525 tcttatgatgatcagttacttcatttggccgctgacttagcccagaggttattacctgca 584 ||||||||||||||||| |||||||| || ||||||||||| || || || |||||||| Sbjct: 32694843 tcttatgatgatcagttgcttcatttagcggctgacttagctcaaagattgctacctgca 32694902 Query: 585 tttgacactcctacaggt 602 ||||||||||| |||||| Sbjct: 32694903 tttgacactccaacaggt 32694920 Score = 81.8 bits (41), Expect = 1e-11 Identities = 74/85 (87%) Strand = Plus / Plus Query: 426 aaaactgtctcagttttcgagaccaatatacgtatccttggcggtctgttatcagctcac 485 ||||||||||| ||||| || ||||| ||||| || ||||| |||||| ||||||||||| Sbjct: 32694200 aaaactgtctctgtttttgaaaccaacatacgcattcttgggggtctgctatcagctcac 32694259 Query: 486 ttgattgccagtgactatgccactg 510 ||||||||||||| ||||| |||| Sbjct: 32694260 ctgattgccagtgattatgcaactg 32694284 Score = 77.8 bits (39), Expect = 2e-10 Identities = 54/59 (91%) Strand = Plus / Plus Query: 598 caggtattccatttggatctgttaatttactgtatggagtcgatgatgatgaaagcaag 656 ||||||||||||||||||| || |||||| |||||||||||||||| ||||||||||| Sbjct: 32696061 caggtattccatttggatcagtaaatttattgtatggagtcgatgaaaatgaaagcaag 32696119 Score = 71.9 bits (36), Expect = 1e-08 Identities = 60/68 (88%) Strand = Plus / Plus Query: 655 agataacatcgacggctggtggtggcactttgacattggagttcggtgtcttgagtcggt 714 ||||||| || || ||||||||||||||||||||| |||| || |||||| ||||||| | Sbjct: 32696551 agataacttcaacagctggtggtggcactttgacactggaatttggtgtcctgagtcgtt 32696610 Query: 715 tgactaat 722 |||||||| Sbjct: 32696611 tgactaat 32696618 Score = 67.9 bits (34), Expect = 2e-07 Identities = 49/54 (90%) Strand = Plus / Plus Query: 838 aggatgcaggaatcggcacaagcatcgactcattctacgaatatcttctgaagg 891 ||||||||||||| ||||||||||| ||||||||||| || |||||||| |||| Sbjct: 32697606 aggatgcaggaattggcacaagcattgactcattctatgagtatcttctaaagg 32697659 Score = 67.9 bits (34), Expect = 2e-07 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1699 agggagtttgtccaggattgagtcatgcacagaaacttggcatatc 1744 ||||||||||||||||||| | |||||| ||||||||||||||||| Sbjct: 32701007 agggagtttgtccaggattaactcatgcccagaaacttggcatatc 32701052 Score = 60.0 bits (30), Expect = 4e-05 Identities = 60/70 (85%) Strand = Plus / Plus Query: 1463 atacatattcagcacagaaggccatttgttacctgctactcccgaaatatccttggtaga 1522 ||||||||| || |||||||| ||| |||| ||||||||||| | ||| ||||| |||| Sbjct: 32700363 atacatatttagtacagaaggtcatctgttgcctgctactcctcagataaccttgttaga 32700422 Query: 1523 tgagcattgc 1532 |||||||||| Sbjct: 32700423 tgagcattgc 32700432 Score = 56.0 bits (28), Expect = 6e-04 Identities = 52/60 (86%) Strand = Plus / Plus Query: 1813 aatccagtgtccagattcaatcaagttctgtgatattgatctctcatccagccacaagcc 1872 ||||||||||||| ||||||||||||||| |||||||| || ||||||| | |||||| Sbjct: 32701130 aatccagtgtccaagctcaatcaagttctgttatattgatatcgcatccagtcgcaagcc 32701189 Score = 42.1 bits (21), Expect = 9.0 Identities = 36/41 (87%) Strand = Plus / Plus Query: 171 ggcgtcacgcctaccgaggcgctccggctacgcgacgaggt 211 ||||||||||| ||||||| | |||||| ||||||||||| Sbjct: 32692459 ggcgtcacgccctccgaggcccgccggctccgcgacgaggt 32692499
>dbj|AP003265.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0490D09 Length = 154430 Score = 200 bits (101), Expect = 2e-47 Identities = 128/137 (93%) Strand = Plus / Plus Query: 1254 aggtaccttgatgttggaagggacatactagcaagccttcaatatgctgctaaatgtcct 1313 ||||||||||||||||||||||| ||| |||||||||||||||||| |||||||||||| Sbjct: 62542 aggtaccttgatgttggaagggatatattagcaagccttcaatatggtgctaaatgtcca 62601 Query: 1314 tgtggctactgccacatatcagatgtggaaacccacaagcaggatgaccacatggagagt 1373 ||||| |||||||| || |||||||| ||||||||| ||||||||||||||||||||||| Sbjct: 62602 tgtggttactgccatatttcagatgtagaaacccaccagcaggatgaccacatggagagt 62661 Query: 1374 tttttccttgcagaaac 1390 ||||||||||||||||| Sbjct: 62662 tttttccttgcagaaac 62678 Score = 155 bits (78), Expect = 9e-34 Identities = 111/122 (90%) Strand = Plus / Plus Query: 208 aggtgaaagatatgttttatcatgcatttgatgggtacatgcaacatgcttttccacttg 267 |||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 55960 aggtcaaagatatgttctatcatgcatttgatgggtacatgcaacatgcttttccacttg 56019 Query: 268 atgaactgcgaccgttgagttgtcaaggggaagactcccttggtggttatgcacttactc 327 ||||| |||| || || ||||| ||||| ||||| || |||||||| ||||||||||||| Sbjct: 56020 atgaattgcggcctttaagttgccaaggagaagattcacttggtggctatgcacttactc 56079 Query: 328 tt 329 || Sbjct: 56080 tt 56081 Score = 151 bits (76), Expect = 1e-32 Identities = 106/116 (91%) Strand = Plus / Plus Query: 1060 aggttttagctggagatgtcgatcctgccattcgaacacatgctgccttctttagcgtct 1119 |||| |||||||||||||| ||||||||||||||||| |||||||||||||| || || | Sbjct: 61473 aggtgttagctggagatgttgatcctgccattcgaactcatgctgccttcttcagtgtat 61532 Query: 1120 ggaaaaaatatgggttcactccagaagggtttaatctcgctacatctactgttcag 1175 ||||||||||||| ||||| ||||||||||||||||| |||||||| ||||||||| Sbjct: 61533 ggaaaaaatatggcttcaccccagaagggtttaatcttgctacatccactgttcag 61588 Score = 141 bits (71), Expect = 1e-29 Identities = 77/79 (97%) Strand = Plus / Plus Query: 987 gaggtaaatatgaattctggtgctactgtttggccactattcaatagtctgcaggcattc 1046 |||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||| Sbjct: 61320 gaggtaaatatgaattctggtgctactgtttggccactattcaacagtctccaggcattc 61379 Query: 1047 tggccaggacttcaggttt 1065 ||||||||||||||||||| Sbjct: 61380 tggccaggacttcaggttt 61398 Score = 129 bits (65), Expect = 5e-26 Identities = 80/85 (94%) Strand = Plus / Plus Query: 1173 cagaatggacaacggagctacccgctgcggcctgagttgattgaaagcacatattggcta 1232 |||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 61807 cagaatggacaaaggagctacccgctgcggcctgaattgattgaaagcacatattggctg 61866 Query: 1233 ttcaaggctaccagagattttaggt 1257 ||||||||||| ||||||| ||||| Sbjct: 61867 ttcaaggctactagagattataggt 61891 Score = 121 bits (61), Expect = 1e-23 Identities = 82/89 (92%) Strand = Plus / Plus Query: 333 gactctttggatactctggctttactaggtgataaggagagatttgctgctggtgtggag 392 |||||||||||||| ||||||||||||| |||||||||||||||| ||||| |||||| Sbjct: 56180 gactctttggataccttggctttactaggggataaggagagatttgatgctgccgtggag 56239 Query: 393 tgggttggtaagaacgtccgctttgatat 421 |||||||||||||| |||||||||||||| Sbjct: 56240 tgggttggtaagaatgtccgctttgatat 56268 Score = 113 bits (57), Expect = 3e-21 Identities = 90/101 (89%) Strand = Plus / Plus Query: 740 agttaccaaaaattcagtgcgtgggatatgggcacgcaggtcaaaactcaaccttgttgg 799 |||||| ||||| || |||||||| ||||||||||||||||| ||||| |||||||||| Sbjct: 59878 agttacaaaaaactctgtgcgtggaatatgggcacgcaggtcgaaacttgaccttgttgg 59937 Query: 800 agcccatataaatgtcttcactggtgaatggacacaaaagg 840 |||||||||||||| || ||||||||||||||||| |||| Sbjct: 59938 tgcccatataaatgtatttactggtgaatggacacagaagg 59978 Score = 111 bits (56), Expect = 1e-20 Identities = 65/68 (95%) Strand = Plus / Plus Query: 1395 aaatatctctggcttctttttgatttagctgtaggccctgataacattgttgaaaatggg 1454 ||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||| Sbjct: 63008 aaatatctctggcttctttttgatttagctgcaggccctgataatattgttgaaaatggg 63067 Query: 1455 ccttataa 1462 || ||||| Sbjct: 63068 ccatataa 63075 Score = 99.6 bits (50), Expect = 4e-17 Identities = 83/94 (88%) Strand = Plus / Plus Query: 889 aggcatatttattgttcggagatgaagaatacttgtatgtatttgaagaggcttacaagg 948 |||| |||||||| || |||||||||||||| |||||| ||||| | ||||||||||||| Sbjct: 60947 aggcgtatttattatttggagatgaagaatatttgtatatatttcaggaggcttacaagg 61006 Query: 949 ctgccatgcactacctccaccatgatccttggta 982 |||||||||| || ||||| |||||||| ||||| Sbjct: 61007 ctgccatgcattatctccatcatgatccctggta 61040 Score = 83.8 bits (42), Expect = 3e-12 Identities = 69/78 (88%) Strand = Plus / Plus Query: 525 tcttatgatgatcagttacttcatttggccgctgacttagcccagaggttattacctgca 584 ||||||||||||||||| |||||||| || ||||||||||| || || || |||||||| Sbjct: 57638 tcttatgatgatcagttgcttcatttagcggctgacttagctcaaagattgctacctgca 57697 Query: 585 tttgacactcctacaggt 602 ||||||||||| |||||| Sbjct: 57698 tttgacactccaacaggt 57715 Score = 81.8 bits (41), Expect = 1e-11 Identities = 74/85 (87%) Strand = Plus / Plus Query: 426 aaaactgtctcagttttcgagaccaatatacgtatccttggcggtctgttatcagctcac 485 ||||||||||| ||||| || ||||| ||||| || ||||| |||||| ||||||||||| Sbjct: 56995 aaaactgtctctgtttttgaaaccaacatacgcattcttgggggtctgctatcagctcac 57054 Query: 486 ttgattgccagtgactatgccactg 510 ||||||||||||| ||||| |||| Sbjct: 57055 ctgattgccagtgattatgcaactg 57079 Score = 77.8 bits (39), Expect = 2e-10 Identities = 54/59 (91%) Strand = Plus / Plus Query: 598 caggtattccatttggatctgttaatttactgtatggagtcgatgatgatgaaagcaag 656 ||||||||||||||||||| || |||||| |||||||||||||||| ||||||||||| Sbjct: 58856 caggtattccatttggatcagtaaatttattgtatggagtcgatgaaaatgaaagcaag 58914 Score = 71.9 bits (36), Expect = 1e-08 Identities = 60/68 (88%) Strand = Plus / Plus Query: 655 agataacatcgacggctggtggtggcactttgacattggagttcggtgtcttgagtcggt 714 ||||||| || || ||||||||||||||||||||| |||| || |||||| ||||||| | Sbjct: 59346 agataacttcaacagctggtggtggcactttgacactggaatttggtgtcctgagtcgtt 59405 Query: 715 tgactaat 722 |||||||| Sbjct: 59406 tgactaat 59413 Score = 67.9 bits (34), Expect = 2e-07 Identities = 49/54 (90%) Strand = Plus / Plus Query: 838 aggatgcaggaatcggcacaagcatcgactcattctacgaatatcttctgaagg 891 ||||||||||||| ||||||||||| ||||||||||| || |||||||| |||| Sbjct: 60401 aggatgcaggaattggcacaagcattgactcattctatgagtatcttctaaagg 60454 Score = 67.9 bits (34), Expect = 2e-07 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1699 agggagtttgtccaggattgagtcatgcacagaaacttggcatatc 1744 ||||||||||||||||||| | |||||| ||||||||||||||||| Sbjct: 63802 agggagtttgtccaggattaactcatgcccagaaacttggcatatc 63847 Score = 60.0 bits (30), Expect = 4e-05 Identities = 60/70 (85%) Strand = Plus / Plus Query: 1463 atacatattcagcacagaaggccatttgttacctgctactcccgaaatatccttggtaga 1522 ||||||||| || |||||||| ||| |||| ||||||||||| | ||| ||||| |||| Sbjct: 63158 atacatatttagtacagaaggtcatctgttgcctgctactcctcagataaccttgttaga 63217 Query: 1523 tgagcattgc 1532 |||||||||| Sbjct: 63218 tgagcattgc 63227 Score = 56.0 bits (28), Expect = 6e-04 Identities = 52/60 (86%) Strand = Plus / Plus Query: 1813 aatccagtgtccagattcaatcaagttctgtgatattgatctctcatccagccacaagcc 1872 ||||||||||||| ||||||||||||||| |||||||| || ||||||| | |||||| Sbjct: 63925 aatccagtgtccaagctcaatcaagttctgttatattgatatcgcatccagtcgcaagcc 63984 Score = 42.1 bits (21), Expect = 9.0 Identities = 36/41 (87%) Strand = Plus / Plus Query: 171 ggcgtcacgcctaccgaggcgctccggctacgcgacgaggt 211 ||||||||||| ||||||| | |||||| ||||||||||| Sbjct: 55254 ggcgtcacgccctccgaggcccgccggctccgcgacgaggt 55294
>ref|NM_123737.1| Arabidopsis thaliana alpha-mannosidase/ calcium ion binding / mannosyl-oligosaccharide 1,2-alpha-mannosidase (AT5G43710) mRNA, complete cds Length = 2103 Score = 145 bits (73), Expect = 8e-31 Identities = 457/585 (78%) Strand = Plus / Plus Query: 579 cctgcatttgacactcctacaggtattccatttggatctgttaatttactgtatggagtc 638 ||||||||||| || || || || || |||||||||||||| ||||| |||| || || Sbjct: 605 cctgcatttgatacaccgactggaatcccatttggatctgtgaatttgatgtacggtgtt 664 Query: 639 gatgatgatgaaagcaagataacatcgacggctggtggtggcactttgacattggagttc 698 || | ||||||||||||||||||| || || |||||||| |||||| | || ||||| Sbjct: 665 gacaaacatgaaagcaagataacatcaactgccggtggtggtactttgtctttagagttt 724 Query: 699 ggtgtcttgagtcggttgactaataacactgtttttgagcaagttaccaaaaattcagtg 758 || || | ||||| || || ||| | ||||||| || |||||| | || ||| | ||| Sbjct: 725 ggcgtgcttagtcgtttaacaaatgatcctgttttcgaacaagttgcaaagaatgcggtg 784 Query: 759 cgtgggatatgggcacgcaggtcaaaactcaaccttgttggagcccatataaatgtcttc 818 | || |||||||||| | ||||| ||| || | ||||| || || || |||||||| Sbjct: 785 aggggactatgggcacgtcgttcaaatctcgacttggttggtgctcacatcaatgtcttt 844 Query: 819 actggtgaatggacacaaaaggatgcaggaatcggcacaagcatcgactcattctacgaa 878 || |||||||||||||| |||||||| || || || |||||||| || || ||||| || Sbjct: 845 acaggtgaatggacacagaaggatgctggtataggaacaagcattgattccttctatgag 904 Query: 879 tatcttctgaaggcatatttattgttcggagatgaagaatacttgtatgtatttgaagag 938 ||||| || ||||| ||| || | || || ||||| ||||| | || | ||| |||| Sbjct: 905 tatctactcaaggcttatatactatttggggatgaggaatatctatacatttttcaagaa 964 Query: 939 gcttacaaggctgccatgcactacctccaccatgatccttggtatattgaggtaaatatg 998 ||||| | |||| ||||| ||||| ||| | |||||||||||| | || || |||||| Sbjct: 965 gcttatagatctgcaatgcagtaccttcacaaggatccttggtatgtagaagtcaatatg 1024 Query: 999 aattctggtgctactgtttggccactattcaatagtctgcaggcattctggccaggactt 1058 |||| | |||| ||| |||||| |||| || || || || || ||||||||||||||| Sbjct: 1025 gattccgcagctattgtctggccagtatttaacagccttcaagctttctggccaggactt 1084 Query: 1059 caggttttagctggagatgtcgatcctgccattcgaacacatgctgccttctttagcgtc 1118 ||||||||||||||||| || ||||| || || |||| || ||||||||||||||||| Sbjct: 1085 caggttttagctggagacgttgatccagcaataagaactcacactgccttctttagcgtc 1144 Query: 1119 tggaaaaaatatgggttcactccagaagggtttaatctcgctaca 1163 |||||| |||||| ||||| || || || |||||||| |||||| Sbjct: 1145 tggaaacgatatggtttcacccctgagggttttaatcttgctaca 1189 Score = 52.0 bits (26), Expect = 0.009 Identities = 116/146 (79%) Strand = Plus / Plus Query: 219 atgttttatcatgcatttgatgggtacatgcaacatgcttttccacttgatgaactgcga 278 |||||||||||||| |||||||| || ||| | |||| |||||||| |||||| || || Sbjct: 245 atgttttatcatgcctttgatggatatatgaacaatgcgtttccactcgatgaattgaga 304 Query: 279 ccgttgagttgtcaaggggaagactcccttggtggttatgcacttactcttatcgactct 338 ||||| ||| ||||| ||||| | ||||| || ||||| | ||||| || ||||| Sbjct: 305 ccgttatcttgccaaggagaagatactcttggaggctatgcgttgactctgattgactcg 364 Query: 339 ttggatactctggctttactaggtga 364 |||||||| | |||||||| ||||| Sbjct: 365 ttggatacattagctttacttggtga 390 Score = 42.1 bits (21), Expect = 9.0 Identities = 54/65 (83%) Strand = Plus / Plus Query: 1362 cacatggagagttttttccttgcagaaacggtaaaatatctctggcttctttttgattta 1421 ||||||||||| || ||||| ||||||||||| || || | ||||| || ||||| ||| Sbjct: 1388 cacatggagagcttcttcctcgcagaaacggtgaagtacttatggctactctttgactta 1447 Query: 1422 gctgt 1426 ||||| Sbjct: 1448 gctgt 1452
>gb|AY040044.1| Arabidopsis thaliana unknown protein (At5g43710) mRNA, complete cds Length = 1875 Score = 145 bits (73), Expect = 8e-31 Identities = 457/585 (78%) Strand = Plus / Plus Query: 579 cctgcatttgacactcctacaggtattccatttggatctgttaatttactgtatggagtc 638 ||||||||||| || || || || || |||||||||||||| ||||| |||| || || Sbjct: 499 cctgcatttgatacaccgactggaatcccatttggatctgtgaatttgatgtacggtgtt 558 Query: 639 gatgatgatgaaagcaagataacatcgacggctggtggtggcactttgacattggagttc 698 || | ||||||||||||||||||| || || |||||||| |||||| | || ||||| Sbjct: 559 gacaaacatgaaagcaagataacatcaactgccggtggtggtactttgtctttagagttt 618 Query: 699 ggtgtcttgagtcggttgactaataacactgtttttgagcaagttaccaaaaattcagtg 758 || || | ||||| || || ||| | ||||||| || |||||| | || ||| | ||| Sbjct: 619 ggcgtgcttagtcgtttaacaaatgatcctgttttcgaacaagttgcaaagaatgcggtg 678 Query: 759 cgtgggatatgggcacgcaggtcaaaactcaaccttgttggagcccatataaatgtcttc 818 | || |||||||||| | ||||| ||| || | ||||| || || || |||||||| Sbjct: 679 aggggactatgggcacgtcgttcaaatctcgacttggttggtgctcacatcaatgtcttt 738 Query: 819 actggtgaatggacacaaaaggatgcaggaatcggcacaagcatcgactcattctacgaa 878 || |||||||||||||| |||||||| || || || |||||||| || || ||||| || Sbjct: 739 acaggtgaatggacacagaaggatgctggtataggaacaagcattgattccttctatgag 798 Query: 879 tatcttctgaaggcatatttattgttcggagatgaagaatacttgtatgtatttgaagag 938 ||||| || ||||| ||| || | || || ||||| ||||| | || | ||| |||| Sbjct: 799 tatctactcaaggcttatatactatttggggatgaggaatatctatacatttttcaagaa 858 Query: 939 gcttacaaggctgccatgcactacctccaccatgatccttggtatattgaggtaaatatg 998 ||||| | |||| ||||| ||||| ||| | |||||||||||| | || || |||||| Sbjct: 859 gcttatagatctgcaatgcagtaccttcacaaggatccttggtatgtagaagtcaatatg 918 Query: 999 aattctggtgctactgtttggccactattcaatagtctgcaggcattctggccaggactt 1058 |||| | |||| ||| |||||| |||| || || || || || ||||||||||||||| Sbjct: 919 gattccgcagctattgtctggccagtatttaacagccttcaagctttctggccaggactt 978 Query: 1059 caggttttagctggagatgtcgatcctgccattcgaacacatgctgccttctttagcgtc 1118 ||||||||||||||||| || ||||| || || |||| || ||||||||||||||||| Sbjct: 979 caggttttagctggagacgttgatccagcaataagaactcacactgccttctttagcgtc 1038 Query: 1119 tggaaaaaatatgggttcactccagaagggtttaatctcgctaca 1163 |||||| |||||| ||||| || || || |||||||| |||||| Sbjct: 1039 tggaaacgatatggtttcacccctgagggttttaatcttgctaca 1083 Score = 52.0 bits (26), Expect = 0.009 Identities = 116/146 (79%) Strand = Plus / Plus Query: 219 atgttttatcatgcatttgatgggtacatgcaacatgcttttccacttgatgaactgcga 278 |||||||||||||| |||||||| || ||| | |||| |||||||| |||||| || || Sbjct: 139 atgttttatcatgcctttgatggatatatgaacaatgcgtttccactcgatgaattgaga 198 Query: 279 ccgttgagttgtcaaggggaagactcccttggtggttatgcacttactcttatcgactct 338 ||||| ||| ||||| ||||| | ||||| || ||||| | ||||| || ||||| Sbjct: 199 ccgttatcttgccaaggagaagatactcttggaggctatgcgttgactctgattgactcg 258 Query: 339 ttggatactctggctttactaggtga 364 |||||||| | |||||||| ||||| Sbjct: 259 ttggatacattagctttacttggtga 284 Score = 42.1 bits (21), Expect = 9.0 Identities = 54/65 (83%) Strand = Plus / Plus Query: 1362 cacatggagagttttttccttgcagaaacggtaaaatatctctggcttctttttgattta 1421 ||||||||||| || ||||| ||||||||||| || || | ||||| || ||||| ||| Sbjct: 1282 cacatggagagcttcttcctcgcagaaacggtgaagtacttatggctactctttgactta 1341 Query: 1422 gctgt 1426 ||||| Sbjct: 1342 gctgt 1346
>gb|AF370128.1| Arabidopsis thaliana unknown protein (At5g43710) mRNA, complete cds Length = 2121 Score = 145 bits (73), Expect = 8e-31 Identities = 457/585 (78%) Strand = Plus / Plus Query: 579 cctgcatttgacactcctacaggtattccatttggatctgttaatttactgtatggagtc 638 ||||||||||| || || || || || |||||||||||||| ||||| |||| || || Sbjct: 605 cctgcatttgatacaccgactggaatcccatttggatctgtgaatttgatgtacggtgtt 664 Query: 639 gatgatgatgaaagcaagataacatcgacggctggtggtggcactttgacattggagttc 698 || | ||||||||||||||||||| || || |||||||| |||||| | || ||||| Sbjct: 665 gacaaacatgaaagcaagataacatcaactgccggtggtggtactttgtctttagagttt 724 Query: 699 ggtgtcttgagtcggttgactaataacactgtttttgagcaagttaccaaaaattcagtg 758 || || | ||||| || || ||| | ||||||| || |||||| | || ||| | ||| Sbjct: 725 ggcgtgcttagtcgtttaacaaatgatcctgttttcgaacaagttgcaaagaatgcggtg 784 Query: 759 cgtgggatatgggcacgcaggtcaaaactcaaccttgttggagcccatataaatgtcttc 818 | || |||||||||| | ||||| ||| || | ||||| || || || |||||||| Sbjct: 785 aggggactatgggcacgtcgttcaaatctcgacttggttggtgctcacatcaatgtcttt 844 Query: 819 actggtgaatggacacaaaaggatgcaggaatcggcacaagcatcgactcattctacgaa 878 || |||||||||||||| |||||||| || || || |||||||| || || ||||| || Sbjct: 845 acaggtgaatggacacagaaggatgctggtataggaacaagcattgattccttctatgag 904 Query: 879 tatcttctgaaggcatatttattgttcggagatgaagaatacttgtatgtatttgaagag 938 ||||| || ||||| ||| || | || || ||||| ||||| | || | ||| |||| Sbjct: 905 tatctactcaaggcttatatactatttggggatgaggaatatctatacatttttcaagaa 964 Query: 939 gcttacaaggctgccatgcactacctccaccatgatccttggtatattgaggtaaatatg 998 ||||| | |||| ||||| ||||| ||| | |||||||||||| | || || |||||| Sbjct: 965 gcttatagatctgcaatgcagtaccttcacaaggatccttggtatgtagaagtcaatatg 1024 Query: 999 aattctggtgctactgtttggccactattcaatagtctgcaggcattctggccaggactt 1058 |||| | |||| ||| |||||| |||| || || || || || ||||||||||||||| Sbjct: 1025 gattccgcagctattgtctggccagtatttaacagccttcaagctttctggccaggactt 1084 Query: 1059 caggttttagctggagatgtcgatcctgccattcgaacacatgctgccttctttagcgtc 1118 ||||||||||||||||| || ||||| || || |||| || ||||||||||||||||| Sbjct: 1085 caggttttagctggagacgttgatccagcaataagaactcacactgccttctttagcgtc 1144 Query: 1119 tggaaaaaatatgggttcactccagaagggtttaatctcgctaca 1163 |||||| |||||| ||||| || || || |||||||| |||||| Sbjct: 1145 tggaaacgatatggtttcacccctgagggttttaatcttgctaca 1189 Score = 52.0 bits (26), Expect = 0.009 Identities = 116/146 (79%) Strand = Plus / Plus Query: 219 atgttttatcatgcatttgatgggtacatgcaacatgcttttccacttgatgaactgcga 278 |||||||||||||| |||||||| || ||| | |||| |||||||| |||||| || || Sbjct: 245 atgttttatcatgcctttgatggatatatgaacaatgcgtttccactcgatgaattgaga 304 Query: 279 ccgttgagttgtcaaggggaagactcccttggtggttatgcacttactcttatcgactct 338 ||||| ||| ||||| ||||| | ||||| || ||||| | ||||| || ||||| Sbjct: 305 ccgttatcttgccaaggagaagatactcttggaggctatgcgttgactctgattgactcg 364 Query: 339 ttggatactctggctttactaggtga 364 |||||||| | |||||||| ||||| Sbjct: 365 ttggatacattagctttacttggtga 390 Score = 42.1 bits (21), Expect = 9.0 Identities = 54/65 (83%) Strand = Plus / Plus Query: 1362 cacatggagagttttttccttgcagaaacggtaaaatatctctggcttctttttgattta 1421 ||||||||||| || ||||| ||||||||||| || || | ||||| || ||||| ||| Sbjct: 1388 cacatggagagcttcttcctcgcagaaacggtgaagtacttatggctactctttgactta 1447 Query: 1422 gctgt 1426 ||||| Sbjct: 1448 gctgt 1452
>gb|AY112181.1| Zea mays CL68424_1 mRNA sequence Length = 693 Score = 81.8 bits (41), Expect = 1e-11 Identities = 53/57 (92%) Strand = Plus / Minus Query: 1688 aggttacatcaagggagtttgtccaggattgagtcatgcacagaaacttggcatatc 1744 |||||||||||||||||||||||||||||||| |||||| |||||| |||| ||||| Sbjct: 615 aggttacatcaagggagtttgtccaggattgactcatgcgcagaaatttgggatatc 559 Score = 46.1 bits (23), Expect = 0.57 Identities = 38/43 (88%) Strand = Plus / Minus Query: 1830 caatcaagttctgtgatattgatctctcatccagccacaagcc 1872 |||||||||||| | |||||||||||||| |||| | |||||| Sbjct: 467 caatcaagttctattatattgatctctcacccagtcgcaagcc 425
>dbj|AP006634.1| Lotus japonicus genomic DNA, chromosome 5, clone:LjT15O18, TM0086, complete sequence Length = 133572 Score = 75.8 bits (38), Expect = 6e-10 Identities = 86/102 (84%) Strand = Plus / Minus Query: 1060 aggttttagctggagatgtcgatcctgccattcgaacacatgctgccttctttagcgtct 1119 ||||||||||||||||| || ||||||||||||| || |||||||||||||| || || | Sbjct: 46679 aggttttagctggagatatcaatcctgccattcgtactcatgctgccttcttcagtgttt 46620 Query: 1120 ggaaaaaatatgggttcactccagaagggtttaatctcgcta 1161 ||| || |||||| || || || || || |||||||| |||| Sbjct: 46619 ggagaagatatggttttacccctgagggctttaatcttgcta 46578 Score = 58.0 bits (29), Expect = 2e-04 Identities = 35/37 (94%) Strand = Plus / Minus Query: 569 gaggttattacctgcatttgacactcctacaggtatt 605 |||||| |||||||||||||| ||||||||||||||| Sbjct: 52591 gaggttgttacctgcatttgatactcctacaggtatt 52555 Score = 56.0 bits (28), Expect = 6e-04 Identities = 52/60 (86%) Strand = Plus / Minus Query: 1191 tacccgctgcggcctgagttgattgaaagcacatattggctattcaaggctaccagagat 1250 ||||| |||||||||||||| || || ||||| |||||||||| || |||||||||||| Sbjct: 45522 tacccactgcggcctgagttaatagagagcacctattggctatataaagctaccagagat 45463 Score = 48.1 bits (24), Expect = 0.15 Identities = 90/112 (80%) Strand = Plus / Minus Query: 729 gtttttgagcaagttaccaaaaattcagtgcgtgggatatgggcacgcaggtcaaaactc 788 |||||||| ||||| ||||| ||| |||||| ||| | |||||||| | ||||| || Sbjct: 49760 gtttttgaacaagtcaccaagaatgcagtgcatggactttgggcacgtcgttcaaagctt 49701 Query: 789 aaccttgttggagcccatataaatgtcttcactggtgaatggacacaaaagg 840 || | ||||| || ||||| ||||| || || ||||||||||||||||||| Sbjct: 49700 aatttggttggtgctcatattaatgtttttacaggtgaatggacacaaaagg 49649 Score = 42.1 bits (21), Expect = 9.0 Identities = 36/41 (87%) Strand = Plus / Minus Query: 1464 tacatattcagcacagaaggccatttgttacctgctactcc 1504 |||||||||||||| ||||| ||||| | ||||||||||| Sbjct: 43948 tacatattcagcactgaaggtcatttactgcctgctactcc 43908
>dbj|AB026651.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MQD19 Length = 87286 Score = 71.9 bits (36), Expect = 1e-08 Identities = 87/104 (83%) Strand = Plus / Minus Query: 1060 aggttttagctggagatgtcgatcctgccattcgaacacatgctgccttctttagcgtct 1119 |||||||||||||||| || ||||| || || |||| || |||||||||||||||||| Sbjct: 8645 aggttttagctggagacgttgatccagcaataagaactcacactgccttctttagcgtct 8586 Query: 1120 ggaaaaaatatgggttcactccagaagggtttaatctcgctaca 1163 ||||| |||||| ||||| || || || |||||||| |||||| Sbjct: 8585 ggaaacgatatggtttcacccctgagggttttaatcttgctaca 8542 Score = 52.0 bits (26), Expect = 0.009 Identities = 35/38 (92%) Strand = Plus / Minus Query: 1362 cacatggagagttttttccttgcagaaacggtaaaata 1399 ||||||||||| || ||||| ||||||||||||||||| Sbjct: 8147 cacatggagagcttcttcctcgcagaaacggtaaaata 8110 Score = 50.1 bits (25), Expect = 0.037 Identities = 55/65 (84%) Strand = Plus / Minus Query: 219 atgttttatcatgcatttgatgggtacatgcaacatgcttttccacttgatgaactgcga 278 |||||||||||||| |||||||| || ||| | |||| |||||||| |||||| || || Sbjct: 10967 atgttttatcatgcctttgatggatatatgaacaatgcgtttccactcgatgaattgaga 10908 Query: 279 ccgtt 283 ||||| Sbjct: 10907 ccgtt 10903
>gb|AY110489.1| Zea mays CL39156_1 mRNA sequence Length = 857 Score = 60.0 bits (30), Expect = 4e-05 Identities = 45/50 (90%) Strand = Plus / Minus Query: 525 tcttatgatgatcagttacttcatttggccgctgacttagcccagaggtt 574 ||||||||||| |||||||||||||| || ||||||||||| || ||||| Sbjct: 435 tcttatgatgaccagttacttcatttagctgctgacttagctcaaaggtt 386
>ref|XM_368250.1| Magnaporthe grisea 70-15 chromosome VI hypothetical protein (MG00994.4) partial mRNA Length = 1584 Score = 48.1 bits (24), Expect = 0.15 Identities = 27/28 (96%) Strand = Plus / Plus Query: 237 gatgggtacatgcaacatgcttttccac 264 ||||| |||||||||||||||||||||| Sbjct: 148 gatggctacatgcaacatgcttttccac 175
>gb|CP000382.1| Clostridium novyi NT, complete genome Length = 2547720 Score = 44.1 bits (22), Expect = 2.3 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1393 taaaatatctctggcttctttt 1414 |||||||||||||||||||||| Sbjct: 1618514 taaaatatctctggcttctttt 1618535
>emb|CT737423.5| Pig DNA sequence from clone CH242-28F9 on chromosome 7, complete sequence Length = 186912 Score = 44.1 bits (22), Expect = 2.3 Identities = 22/22 (100%) Strand = Plus / Minus Query: 2162 tgttgtagatctgaaagtaata 2183 |||||||||||||||||||||| Sbjct: 176472 tgttgtagatctgaaagtaata 176451
>gb|AC115697.19| Mus musculus chromosome 7, clone RP24-233E11, complete sequence Length = 161690 Score = 44.1 bits (22), Expect = 2.3 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1287 agccttcaatatgctgctaaat 1308 |||||||||||||||||||||| Sbjct: 40844 agccttcaatatgctgctaaat 40865
>gb|AC123731.9| Mus musculus chromosome 15, clone RP23-458N23, complete sequence Length = 178222 Score = 44.1 bits (22), Expect = 2.3 Identities = 22/22 (100%) Strand = Plus / Minus Query: 287 ttgtcaaggggaagactccctt 308 |||||||||||||||||||||| Sbjct: 26468 ttgtcaaggggaagactccctt 26447
>gb|AC087063.20| Mus musculus strain C57BL/6J clone rp23-20o47 map 7, complete sequence Length = 241381 Score = 44.1 bits (22), Expect = 2.3 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1287 agccttcaatatgctgctaaat 1308 |||||||||||||||||||||| Sbjct: 4860 agccttcaatatgctgctaaat 4839
>emb|AL590039.9| Human DNA sequence from clone RP11-151F15 on chromosome 10, complete sequence Length = 77832 Score = 44.1 bits (22), Expect = 2.3 Identities = 25/26 (96%) Strand = Plus / Minus Query: 911 tgaagaatacttgtatgtatttgaag 936 ||||||||| |||||||||||||||| Sbjct: 26429 tgaagaatatttgtatgtatttgaag 26404
>gb|AC151831.3| Mus musculus BAC clone RP24-81D24 from chromosome 14, complete sequence Length = 212749 Score = 44.1 bits (22), Expect = 2.3 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1395 aaatatctctggcttctttttg 1416 |||||||||||||||||||||| Sbjct: 134433 aaatatctctggcttctttttg 134412
>emb|AJ335833.1|HSA335833 Homo sapiens genomic sequence surrounding NotI site, clone NR1-EF7RS Length = 755 Score = 44.1 bits (22), Expect = 2.3 Identities = 22/22 (100%) Strand = Plus / Plus Query: 2117 acctaacttggagcaccttatg 2138 |||||||||||||||||||||| Sbjct: 523 acctaacttggagcaccttatg 544
>gb|CP000362.1| Roseobacter denitrificans OCh 114, complete genome Length = 4133097 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1570 gtggctacatcagcgctgatg 1590 ||||||||||||||||||||| Sbjct: 2271420 gtggctacatcagcgctgatg 2271400
>ref|NM_025949.2| Mus musculus ribosomal protein S6 kinase polypeptide 6 (Rps6ka6), mRNA Length = 4330 Score = 42.1 bits (21), Expect = 9.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1822 tccagattcaatcaagttctgtgat 1846 |||||||||||||||| |||||||| Sbjct: 2162 tccagattcaatcaagatctgtgat 2186
>gb|AC147964.10| Medicago truncatula clone mth2-5i18, complete sequence Length = 134939 Score = 42.1 bits (21), Expect = 9.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 220 tgttttatcatgcatttgatgggtacatg 248 |||||||||||| |||||||| ||||||| Sbjct: 2815 tgttttatcatgtatttgatgtgtacatg 2843
>gb|AC147649.2| Homo sapiens BAC clone RP11-188B11 from UL, complete sequence Length = 150742 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 821 tggtgaatggacacaaaagga 841 ||||||||||||||||||||| Sbjct: 17466 tggtgaatggacacaaaagga 17486
>gb|AC148027.3| Homo sapiens BAC clone RP11-184H2 from UL, complete sequence Length = 148764 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 821 tggtgaatggacacaaaagga 841 ||||||||||||||||||||| Sbjct: 124802 tggtgaatggacacaaaagga 124782
>gb|AC126552.5| Mus musculus BAC clone RP23-342F3 from chromosome 15, complete sequence Length = 213862 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1826 gattcaatcaagttctgtgat 1846 ||||||||||||||||||||| Sbjct: 191038 gattcaatcaagttctgtgat 191018
>gb|AC130203.4| Mus musculus BAC clone RP24-413E20 from chromosome 15, complete sequence Length = 182040 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1826 gattcaatcaagttctgtgat 1846 ||||||||||||||||||||| Sbjct: 8947 gattcaatcaagttctgtgat 8927
>gb|BC054113.1| Mus musculus ribosomal protein S6 kinase polypeptide 6, mRNA (cDNA clone MGC:60789 IMAGE:30015425), complete cds Length = 3906 Score = 42.1 bits (21), Expect = 9.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1822 tccagattcaatcaagttctgtgat 1846 |||||||||||||||| |||||||| Sbjct: 1849 tccagattcaatcaagatctgtgat 1873
>gb|AC154334.2| Mus musculus BAC clone RP24-497L7 from chromosome 14, complete sequence Length = 127819 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 2215 gatatggttttgatcaaatag 2235 ||||||||||||||||||||| Sbjct: 97517 gatatggttttgatcaaatag 97497
>gb|BC041342.2| Homo sapiens cDNA clone IMAGE:5272084 Length = 3104 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 814 tcttcactggtgaatggacac 834 ||||||||||||||||||||| Sbjct: 2938 tcttcactggtgaatggacac 2958
>emb|CR954246.1| Pseudoalteromonas haloplanktis str. TAC125 chromosome I, complete sequence Length = 3214944 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1393 taaaatatctctggcttcttt 1413 ||||||||||||||||||||| Sbjct: 2213068 taaaatatctctggcttcttt 2213088
>emb|CT009734.9| Mouse DNA sequence from clone RP23-182E3 on chromosome 14, complete sequence Length = 202398 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 2215 gatatggttttgatcaaatag 2235 ||||||||||||||||||||| Sbjct: 140574 gatatggttttgatcaaatag 140594
>dbj|AK049349.1| Mus musculus ES cells cDNA, RIKEN full-length enriched library, clone:C330026J02 product:RIBOSOMAL PROTEIN S6 KINASE ALPHA 6 (EC 2.7.1.-) (S6K-ALPHA 6) (90 KDA RIBOSOMAL PROTEIN S6 KINASE 6) (P90-RSK 6) (RIBOSOMAL S6 KINASE 4) (RSK-4) (PP90RSK4) homolog [Homo sapiens], full insert sequence Length = 3684 Score = 42.1 bits (21), Expect = 9.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1822 tccagattcaatcaagttctgtgat 1846 |||||||||||||||| |||||||| Sbjct: 1927 tccagattcaatcaagatctgtgat 1951
>dbj|AK012150.2| Mus musculus 10 days embryo whole body cDNA, RIKEN full-length enriched library, clone:2610524K04 product:RIBOSOMAL PROTEIN S6 KINASE ALPHA 6 (EC 2.7.1.-) (S6K-ALPHA 6) (90 KDA RIBOSOMAL PROTEIN S6 KINASE 6) (P90-RSK 6) (RIBOSOMAL S6 KINASE 4) (RSK-4) (PP90RSK4) homolog [Homo sapiens], full insert sequence Length = 3062 Score = 42.1 bits (21), Expect = 9.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1822 tccagattcaatcaagttctgtgat 1846 |||||||||||||||| |||||||| Sbjct: 926 tccagattcaatcaagatctgtgat 950
>gb|AC084364.20| Homo sapiens 12q BAC RP11-626I20 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 104791 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 814 tcttcactggtgaatggacac 834 ||||||||||||||||||||| Sbjct: 68821 tcttcactggtgaatggacac 68841
>gb|AF413213.1|AF413213 Prunus serotina prunasin hydrolase isoform PH C precursor (PH-L4) gene, partial cds Length = 3655 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 530 tgatgatcagttacttcattt 550 ||||||||||||||||||||| Sbjct: 413 tgatgatcagttacttcattt 433
>gb|AC148484.17| Medicago truncatula clone mth2-46g10, complete sequence Length = 130381 Score = 42.1 bits (21), Expect = 9.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 220 tgttttatcatgcatttgatgggtacatg 248 |||||||||||| |||||||| ||||||| Sbjct: 61500 tgttttatcatgtatttgatgtgtacatg 61472
>gb|AC016730.9| Homo sapiens BAC clone RP11-375H3 from 2, complete sequence Length = 172243 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 2061 gacattcatattgaagatggt 2081 ||||||||||||||||||||| Sbjct: 146756 gacattcatattgaagatggt 146736
>ref|NM_031779.1| Rattus norvegicus amyloid beta (A4) precursor protein-binding, family A, member 1 (Apba1), mRNA gb|AF029105.1|AF029105 Rattus norvegicus Mint1 mRNA, complete cds Length = 3901 Score = 42.1 bits (21), Expect = 9.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 962 cctccaccatgatccttggtatatt 986 |||||||||||||||| |||||||| Sbjct: 3350 cctccaccatgatcctaggtatatt 3326
>emb|CR392009.5| Mouse DNA sequence from clone RP24-250C1 on chromosome X, complete sequence Length = 106098 Score = 42.1 bits (21), Expect = 9.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1822 tccagattcaatcaagttctgtgat 1846 |||||||||||||||| |||||||| Sbjct: 44440 tccagattcaatcaagatctgtgat 44416
>gb|AC011547.4|AC011547 Homo sapiens chromosome 19 clone LLNLR-272C5, complete sequence Length = 41174 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 247 tgcaacatgcttttccacttg 267 ||||||||||||||||||||| Sbjct: 28485 tgcaacatgcttttccacttg 28465
>gb|AC148030.2| Homo sapiens chromosome UNKNOWN clone RP11-134K23, complete sequence Length = 157579 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 821 tggtgaatggacacaaaagga 841 ||||||||||||||||||||| Sbjct: 117713 tggtgaatggacacaaaagga 117693
>emb|AL137218.5| Human DNA sequence from clone RP11-111E21, complete sequence Length = 137718 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 821 tggtgaatggacacaaaagga 841 ||||||||||||||||||||| Sbjct: 86619 tggtgaatggacacaaaagga 86599
>ref|NM_053848.1| Rattus norvegicus opioid binding protein/cell adhesion molecule-like (Opcml), mRNA gb|M88711.1|RATCALMC Rattus norvegicus cell adhesion-like molecule mRNA, complete cds Length = 2337 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 9 tctccctcctcccgggctccc 29 ||||||||||||||||||||| Sbjct: 185 tctccctcctcccgggctccc 205 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 418,960,574 Number of extensions: 21397732 Number of successful extensions: 97872 Number of sequences better than 10.0: 44 Number of HSP's gapped: 97871 Number of HSP's successfully gapped: 101 Length of query: 2344 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 2321 Effective length of database: 18,503,978,556 Effective search space: 42947734228476 Effective search space used: 42947734228476 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 15 (30.2 bits)