| Clone Name | FLbaf137c08 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | LOC_Os09g38400:12009.t03308:unspliced-genomic zinc finger pr... | 28 | 0.024 | 2 | LOC_Os08g23720:12008.t02143:unspliced-genomic glucan endo-1,... | 33 | 2.5 | 3 | LOC_Os06g43060:12006.t03996:unspliced-genomic expressed protein | 33 | 3.5 | 4 | LOC_Os01g27150:12001.t02419:unspliced-genomic cullin-1, puta... | 32 | 4.7 | 5 | LOC_Os05g33400:12005.t02935:unspliced-genomic basic 7S globu... | 31 | 9.0 |
|---|
>LOC_Os09g38400:12009.t03308:unspliced-genomic zinc finger protein hangover, putative, expressed| Length = 2233 Score = 27.6 bits (54), Expect(3) = 0.024 Identities = 10/14 (71%), Positives = 11/14 (78%) Frame = -3 / -2 Query: 224 ISCWPSLKISAPLF 183 I+CW SL ISAP F Sbjct: 1545 IACWSSLNISAPPF 1504 Score = 26.7 bits (52), Expect(3) = 0.024 Identities = 8/9 (88%), Positives = 8/9 (88%) Frame = -3 / -2 Query: 569 HFFFLAGGW 543 HFFFL GGW Sbjct: 1968 HFFFLEGGW 1942 Score = 25.8 bits (50), Expect(3) = 0.024 Identities = 11/15 (73%), Positives = 12/15 (80%) Frame = -3 / -2 Query: 272 LFSGTVSDLILPNCL 228 LFSG SDLILP+ L Sbjct: 1683 LFSGVDSDLILPSSL 1639 Score = 27.2 bits (53), Expect(2) = 0.32 Identities = 10/12 (83%), Positives = 11/12 (91%) Frame = +1 / +2 Query: 238 GRIKSETVPENK 273 GRIKSE+ PENK Sbjct: 1649 GRIKSESTPENK 1684 Score = 26.3 bits (51), Expect(2) = 0.32 Identities = 10/16 (62%), Positives = 11/16 (68%) Frame = +1 / +2 Query: 184 NNGADIFNDGQQEIIK 231 N GADIFN+ Q I K Sbjct: 1505 NGGADIFNEDQHAIYK 1552
>LOC_Os08g23720:12008.t02143:unspliced-genomic glucan endo-1,3-beta-glucosidase 5 precursor, putative, expressed| Length = 5263 Score = 33.1 bits (66), Expect = 2.5 Identities = 13/25 (52%), Positives = 16/25 (64%) Frame = +2 / -2 Query: 569 DLVPSSCCVSVR*FICCLDHD*AGL 643 D+ PS V F+CCL HD*+GL Sbjct: 4269 DIHPSEAPQDVEEFLCCLKHD*SGL 4195
>LOC_Os06g43060:12006.t03996:unspliced-genomic expressed protein| Length = 610 Score = 32.7 bits (65), Expect = 3.5 Identities = 16/50 (32%), Positives = 29/50 (58%) Frame = -2 / -2 Query: 735 HNAGNNIRSSMFYSMRHQTTTTQKLHRSVCTRPAQS*SRQQIN*RTETQQ 586 HN + + + S HQTT+T K++ +V T+P +S + Q I+ T++ Sbjct: 540 HNI*STTNNQLPSS*IHQTTSTHKINPTVSTQPMRSIADQSIDHNQTTRR 391
>LOC_Os01g27150:12001.t02419:unspliced-genomic cullin-1, putative, expressed| Length = 8746 Score = 32.2 bits (64), Expect = 4.7 Identities = 12/31 (38%), Positives = 20/31 (64%) Frame = +3 / +2 Query: 681 FGVS*SRTLNF*CCFLRCASSLNISLLMCLL 773 + V * ++NF*CC + A + ISL+ C++ Sbjct: 7352 YSVV*YESVNF*CCIINYACTFLISLVQCII 7444
>LOC_Os05g33400:12005.t02935:unspliced-genomic basic 7S globulin precursor, putative, expressed| Length = 1482 Score = 31.3 bits (62), Expect = 9.0 Identities = 10/20 (50%), Positives = 16/20 (80%) Frame = -2 / +2 Query: 819 FFFGVTRIRLNGITAPINTS 760 +F G+TRI++NG P+NT+ Sbjct: 830 YFVGLTRIKVNGRAVPLNTT 889 Database: tigr.seq.out Posted date: Jul 20, 2007 8:58 AM Number of letters in database: 166,841,660 Number of sequences in database: 56,278 Lambda K H 0.318 0.134 0.401 Matrix: BLOSUM62 Number of Sequences: 56278 Number of Hits to DB: 195,075,529 Number of extensions: 2486724 Number of successful extensions: 8874 Number of sequences better than 10.0: 5 Length of query: 275 Length of database: 55,613,886 Length adjustment: 49 Effective length of query: 226 Effective length of database: 52,856,264 Effective search space: 11945515664 Effective search space used: 11945515664 Neighboring words threshold: 13 Window for multiple hits: 40 X1: 16 ( 7.3 bits)