ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf139h15
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1AK070753:Os08g0359600 160 1e-39
2AK099298:Os04g0691600 54 2e-07
3AK059422:Os04g0691600 54 2e-07
4AF095707:Os04g0691600 54 2e-07
5AK120520:Os04g0502300 39 0.004
6AK121056:Os07g0565000 38 0.009
7Os07g0565100:Os07g0565100 30 2.0
8Os08g0223900:Os08g0223900 28 7.5

>AK070753:Os08g0359600 |
          Length = 107
 Score =  160 bits (406), Expect = 1e-39
 Identities = 81/107 (75%), Positives = 88/107 (82%), Gaps = 3/107 (2%)
 Frame = +1

Query: 112 MKPVVGIVVSNKMQKSVVVAVDRLFHNKVYNRYVKRTSKFMAHDEAETCNIGDRVRLDPS 291
           MKPVVGIVVSNKMQKSVVVAVDRLFH+K+YNRYVKRTSKFMAHDE E CNIGDRV+LDPS
Sbjct: 1   MKPVVGIVVSNKMQKSVVVAVDRLFHHKMYNRYVKRTSKFMAHDETEDCNIGDRVKLDPS 60

Query: 292 RPLSKNKHWIVAEVLRRAKMYVAQPPAAKAS---GATTQQTSPKSSA 423
           RPLSK KHW+VAE+LRRAK+Y     AA  S   GAT QQ    S +
Sbjct: 61  RPLSKRKHWVVAEILRRAKVYSPSAAAAAVSAQPGATVQQAEAASKS 107



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>AK099298:Os04g0691600 |
          Length = 145

 Score = 53.5 bits (127), Expect = 2e-07
 Identities = 35/101 (34%), Positives = 48/101 (47%), Gaps = 2/101 (1%)
 Frame = +1

Query: 115 KPVVGIVVSNKMQKSVVVAVDRLFHNKVYNRYVKRTSKFMAHDEAETCNIGDRVRLDPSR 294
           K + G VV+ K  K+V V V RL  +  Y R  +   K+ AHD      +GD V L  SR
Sbjct: 38  KQLTGRVVTTKADKTVGVEVVRLAPHPKYKRRERIKKKYQAHDPDNQFKVGDVVELRRSR 97

Query: 295 PLSKNKHWIVAEVLRRAKMYVAQ--PPAAKASGATTQQTSP 411
           P+SK KH++   +  R     +Q  PP    S +  Q   P
Sbjct: 98  PISKTKHFLAVPLPPRDTRRKSQLLPPLQSQSQSQDQDQPP 138



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>AK059422:Os04g0691600 |
          Length = 145

 Score = 53.5 bits (127), Expect = 2e-07
 Identities = 35/101 (34%), Positives = 48/101 (47%), Gaps = 2/101 (1%)
 Frame = +1

Query: 115 KPVVGIVVSNKMQKSVVVAVDRLFHNKVYNRYVKRTSKFMAHDEAETCNIGDRVRLDPSR 294
           K + G VV+ K  K+V V V RL  +  Y R  +   K+ AHD      +GD V L  SR
Sbjct: 38  KQLTGRVVTTKADKTVGVEVVRLAPHPKYKRRERIKKKYQAHDPDNQFKVGDVVELRRSR 97

Query: 295 PLSKNKHWIVAEVLRRAKMYVAQ--PPAAKASGATTQQTSP 411
           P+SK KH++   +  R     +Q  PP    S +  Q   P
Sbjct: 98  PISKTKHFLAVPLPPRDTRRKSQLLPPLQSQSQSQDQDQPP 138



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>AF095707:Os04g0691600 |
          Length = 145

 Score = 53.5 bits (127), Expect = 2e-07
 Identities = 35/101 (34%), Positives = 48/101 (47%), Gaps = 2/101 (1%)
 Frame = +1

Query: 115 KPVVGIVVSNKMQKSVVVAVDRLFHNKVYNRYVKRTSKFMAHDEAETCNIGDRVRLDPSR 294
           K + G VV+ K  K+V V V RL  +  Y R  +   K+ AHD      +GD V L  SR
Sbjct: 38  KQLTGRVVTTKADKTVGVEVVRLAPHPKYKRRERIKKKYQAHDPDNQFKVGDVVELRRSR 97

Query: 295 PLSKNKHWIVAEVLRRAKMYVAQ--PPAAKASGATTQQTSP 411
           P+SK KH++   +  R     +Q  PP    S +  Q   P
Sbjct: 98  PISKTKHFLAVPLPPRDTRRKSQLLPPLQSQSQSQDQDQPP 138



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>AK120520:Os04g0502300 |
          Length = 160

 Score = 39.3 bits (90), Expect = 0.004
 Identities = 30/91 (32%), Positives = 40/91 (43%), Gaps = 1/91 (1%)
 Frame = +1

Query: 121 VVGIVVSNKMQKSVVVAVDRLFHNKVYNRYVKRTSKFMAH-DEAETCNIGDRVRLDPSRP 297
           + G   S KM ++++V  + L   K Y RY KR S   AH         GD V +   RP
Sbjct: 72  IAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRP 131

Query: 298 LSKNKHWIVAEVLRRAKMYVAQPPAAKASGA 390
           LSK   + V +V+          PA   SGA
Sbjct: 132 LSKTVRFNVLKVI----------PAGSKSGA 152



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>AK121056:Os07g0565000 |
          Length = 161

 Score = 38.1 bits (87), Expect = 0.009
 Identities = 25/73 (34%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
 Frame = +1

Query: 121 VVGIVVSNKMQKSVVVAVDRLFHNKVYNRYVKRTSKFMAH-DEAETCNIGDRVRLDPSRP 297
           + G   S KM ++++V  + L   K Y RY KR S   AH         GD V +   RP
Sbjct: 72  IAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHVSPCFRVKEGDHVIIGQCRP 131

Query: 298 LSKNKHWIVAEVL 336
           LSK   + V +V+
Sbjct: 132 LSKTVRFNVLKVI 144



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>Os07g0565100:Os07g0565100 |
          Length = 170

 Score = 30.4 bits (67), Expect = 2.0
 Identities = 25/82 (30%), Positives = 35/82 (42%), Gaps = 10/82 (12%)
 Frame = +1

Query: 121 VVGIVVSNKMQKSVVVAVDRLFHNKVYNR---------YVKRTSKFMAH-DEAETCNIGD 270
           + G   S KM ++++V  + L   K Y R         Y KR S   AH         GD
Sbjct: 72  IAGTCHSAKMNRTIIVRRNYLHFVKKYQRQGANLPPCRYEKRHSNIPAHVSPCFRVKEGD 131

Query: 271 RVRLDPSRPLSKNKHWIVAEVL 336
            V +   RPLSK   + V +V+
Sbjct: 132 HVIIGQCRPLSKTVRFNVLKVI 153



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>Os08g0223900:Os08g0223900 |
          Length = 602

 Score = 28.5 bits (62), Expect = 7.5
 Identities = 16/56 (28%), Positives = 25/56 (44%)
 Frame = +2

Query: 305 KTSIGLLPRFFAELRCMLHSHLQQKLLVRQLNKLAPSHLPEDPQSPTHTCL*ECLF 472
           K  +G + R    LR  LH H  +K+  ++  KL       +P      CL +CL+
Sbjct: 205 KKFVGPITRLVISLREELHIHPYKKIDWKEARKLCAKEDAYNPHMWLQECLSDCLY 260


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 26,138,800
Number of extensions: 568915
Number of successful extensions: 1264
Number of sequences better than 10.0: 8
Number of HSP's gapped: 1264
Number of HSP's successfully gapped: 8
Length of query: 325
Length of database: 15,399,855
Length adjustment: 101
Effective length of query: 224
Effective length of database: 11,355,714
Effective search space: 2543679936
Effective search space used: 2543679936
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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