ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf139h15
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1emb|CT832452.1| Oryza sativa (indica cultivar-group) cDNA clone:... 311 3e-81
2ref|NM_001068167.1| Oryza sativa (japonica cultivar-group) Os08g... 303 6e-79
3dbj|AK070753.1| Oryza sativa (japonica cultivar-group) cDNA clon... 303 6e-79
4gb|DQ244651.1| Zea mays clone 9921 mRNA sequence 285 1e-73
5gb|DQ244634.1| Zea mays clone 9782 mRNA sequence 285 1e-73
6gb|AY106015.1| Zea mays PCO066552 mRNA sequence 285 1e-73
7gb|BT019324.1| Zea mays clone Contig1032.F mRNA sequence 281 2e-72
8dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 226 1e-55
9dbj|AP005628.3| Oryza sativa (japonica cultivar-group) genomic D... 226 1e-55
10dbj|AP005523.3| Oryza sativa (japonica cultivar-group) genomic D... 226 1e-55
11ref|NM_112774.2| Arabidopsis thaliana structural constituent of ... 88 7e-14
12gb|BT004700.1| Arabidopsis thaliana At3g18880 gene, complete cds 88 7e-14
13dbj|AK118396.1| Arabidopsis thaliana At3g18880 mRNA for putative... 88 7e-14
14ref|NM_103830.2| Arabidopsis thaliana EMB1129; structural consti... 84 1e-12
15gb|BT005147.1| Arabidopsis thaliana clone U50950 putative 40S ri... 84 1e-12
16dbj|AP002039.1| Arabidopsis thaliana genomic DNA, chromosome 3, ... 84 1e-12
17dbj|AK118089.1| Arabidopsis thaliana At1g49400 mRNA for unknown ... 84 1e-12
18gb|AC007504.3| Arabidopsis thaliana chromosome I BAC F13F21 geno... 66 3e-07
19emb|BX818605.1|CNS0AAWN Arabidopsis thaliana Full-length cDNA Co... 64 1e-06
20emb|Y08858.1|NPS40RS17 N.plumbaginifolia mRNA for 40S ribosomal ... 62 4e-06
21dbj|AP006716.1| Staphylococcus haemolyticus JCSC1435 DNA, comple... 44 0.93
22emb|CR848038.1| Chlamydophila abortus strain S26/3, complete genome 44 0.93
23ref|XM_001224812.1| Chaetomium globosum CBS 148.51 hypothetical ... 42 3.7
24gb|AC103769.2| Homo sapiens chromosome 8, clone RP11-110G21, com... 42 3.7
25gb|AC090186.7| Homo sapiens chromosome 8, clone RP11-11C20, comp... 42 3.7
26gb|AC020916.8| Homo sapiens chromosome 19 clone CTD-3252C9, comp... 42 3.7

>emb|CT832452.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCEA038M22, full
           insert sequence
          Length = 732
 Score =  311 bits (157), Expect = 3e-81
 Identities = 217/237 (91%)
 Strand = Plus / Plus

                                                                       
Query: 118 ccggtggtgggtatcgtggtgtcgaacaagatgcagaagtcggtggtggtggcggtggac 177
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||| || |||
Sbjct: 173 ccggtggtggggatcgtggtgtcgaacaagatgcagaagtcggtggtggtggccgtcgac 232

                                                                       
Query: 178 cgcctcttccacaacaaggtgtacaaccgctacgtcaagcgcacctccaagttcatggcg 237
           |||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 233 cgcctcttccaccacaagatgtacaaccgctacgtcaagcgcacctccaagttcatggcg 292

                                                                       
Query: 238 cacgacgaggccgagacctgcaacatcggcgacagggttaggctggatccttctaggccg 297
           ||||| ||| |||||  |||||||||||||||| |||||| ||| |||||||||||||| 
Sbjct: 293 cacgatgagaccgaggactgcaacatcggcgaccgggttaagcttgatccttctaggccc 352

                                                                    
Query: 298 ttgagcaaaaacaagcattggattgttgccgaggttcttcgcagagctaagatgtat 354
           ||||||||||  ||||| ||| ||||||||||| ||||||| ||||||||| |||||
Sbjct: 353 ttgagcaaaaggaagcactgggttgttgccgagattcttcgtagagctaaggtgtat 409



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>ref|NM_001068167.1| Oryza sativa (japonica cultivar-group) Os08g0359600 (Os08g0359600)
           mRNA, complete cds
          Length = 758

 Score =  303 bits (153), Expect = 6e-79
 Identities = 216/237 (91%)
 Strand = Plus / Plus

                                                                       
Query: 118 ccggtggtgggtatcgtggtgtcgaacaagatgcagaagtcggtggtggtggcggtggac 177
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||| || |||
Sbjct: 209 ccggtggtggggatcgtggtgtcgaacaagatgcagaagtcggtggtggtggccgtcgac 268

                                                                       
Query: 178 cgcctcttccacaacaaggtgtacaaccgctacgtcaagcgcacctccaagttcatggcg 237
           |||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 cgcctcttccaccacaagatgtacaaccgctacgtcaagcgcacctccaagttcatggcg 328

                                                                       
Query: 238 cacgacgaggccgagacctgcaacatcggcgacagggttaggctggatccttctaggccg 297
           ||||| ||| |||||  ||| |||||||||||| |||||| ||| |||||||||||||| 
Sbjct: 329 cacgatgagaccgaggactgtaacatcggcgaccgggttaagcttgatccttctaggccc 388

                                                                    
Query: 298 ttgagcaaaaacaagcattggattgttgccgaggttcttcgcagagctaagatgtat 354
           ||||||||||  ||||| ||| ||||||||||| ||||||| ||||||||| |||||
Sbjct: 389 ttgagcaaaaggaagcactgggttgttgccgagattcttcgtagagctaaggtgtat 445



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>dbj|AK070753.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023065H04, full
           insert sequence
          Length = 761

 Score =  303 bits (153), Expect = 6e-79
 Identities = 216/237 (91%)
 Strand = Plus / Plus

                                                                       
Query: 118 ccggtggtgggtatcgtggtgtcgaacaagatgcagaagtcggtggtggtggcggtggac 177
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||| || |||
Sbjct: 212 ccggtggtggggatcgtggtgtcgaacaagatgcagaagtcggtggtggtggccgtcgac 271

                                                                       
Query: 178 cgcctcttccacaacaaggtgtacaaccgctacgtcaagcgcacctccaagttcatggcg 237
           |||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 cgcctcttccaccacaagatgtacaaccgctacgtcaagcgcacctccaagttcatggcg 331

                                                                       
Query: 238 cacgacgaggccgagacctgcaacatcggcgacagggttaggctggatccttctaggccg 297
           ||||| ||| |||||  ||| |||||||||||| |||||| ||| |||||||||||||| 
Sbjct: 332 cacgatgagaccgaggactgtaacatcggcgaccgggttaagcttgatccttctaggccc 391

                                                                    
Query: 298 ttgagcaaaaacaagcattggattgttgccgaggttcttcgcagagctaagatgtat 354
           ||||||||||  ||||| ||| ||||||||||| ||||||| ||||||||| |||||
Sbjct: 392 ttgagcaaaaggaagcactgggttgttgccgagattcttcgtagagctaaggtgtat 448



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>gb|DQ244651.1| Zea mays clone 9921 mRNA sequence
          Length = 721

 Score =  285 bits (144), Expect = 1e-73
 Identities = 213/236 (90%)
 Strand = Plus / Plus

                                                                       
Query: 118 ccggtggtgggtatcgtggtgtcgaacaagatgcagaagtcggtggtggtggcggtggac 177
           ||||| ||||| |||||||||||||||||||||||||||||||||||||| || ||||||
Sbjct: 174 ccggttgtggggatcgtggtgtcgaacaagatgcagaagtcggtggtggttgcagtggac 233

                                                                       
Query: 178 cgcctcttccacaacaaggtgtacaaccgctacgtcaagcgcacctccaagttcatggcg 237
           || ||||||||||||||||| |||||||||||||||||||||||||||||||||||||| 
Sbjct: 234 cgtctcttccacaacaaggtatacaaccgctacgtcaagcgcacctccaagttcatggca 293

                                                                       
Query: 238 cacgacgaggccgagacctgcaacatcggcgacagggttaggctggatccttctaggccg 297
           |||||||| | |||  |||||||||| |||||| ||||||||||||||||||||||||| 
Sbjct: 294 cacgacgatgacgactcctgcaacattggcgaccgggttaggctggatccttctaggccc 353

                                                                   
Query: 298 ttgagcaaaaacaagcattggattgttgccgaggttcttcgcagagctaagatgta 353
           ||||||| | ||||||| ||| ||||||| ||  |||| |||||||||||| ||||
Sbjct: 354 ttgagcagacacaagcactgggttgttgctgaaattctccgcagagctaaggtgta 409



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>gb|DQ244634.1| Zea mays clone 9782 mRNA sequence
          Length = 721

 Score =  285 bits (144), Expect = 1e-73
 Identities = 213/236 (90%)
 Strand = Plus / Plus

                                                                       
Query: 118 ccggtggtgggtatcgtggtgtcgaacaagatgcagaagtcggtggtggtggcggtggac 177
           ||||| ||||| |||||||||||||||||||||||||||||||||||||| || ||||||
Sbjct: 174 ccggttgtggggatcgtggtgtcgaacaagatgcagaagtcggtggtggttgcagtggac 233

                                                                       
Query: 178 cgcctcttccacaacaaggtgtacaaccgctacgtcaagcgcacctccaagttcatggcg 237
           || ||||||||||||||||| |||||||||||||||||||||||||||||||||||||| 
Sbjct: 234 cgtctcttccacaacaaggtatacaaccgctacgtcaagcgcacctccaagttcatggca 293

                                                                       
Query: 238 cacgacgaggccgagacctgcaacatcggcgacagggttaggctggatccttctaggccg 297
           |||||||| | |||  |||||||||| |||||| ||||||||||||||||||||||||| 
Sbjct: 294 cacgacgatgacgactcctgcaacattggcgaccgggttaggctggatccttctaggccc 353

                                                                   
Query: 298 ttgagcaaaaacaagcattggattgttgccgaggttcttcgcagagctaagatgta 353
           ||||||| | ||||||| ||| ||||||| ||  |||| |||||||||||| ||||
Sbjct: 354 ttgagcagacacaagcactgggttgttgctgaaattctccgcagagctaaggtgta 409



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>gb|AY106015.1| Zea mays PCO066552 mRNA sequence
          Length = 969

 Score =  285 bits (144), Expect = 1e-73
 Identities = 213/236 (90%)
 Strand = Plus / Plus

                                                                       
Query: 118 ccggtggtgggtatcgtggtgtcgaacaagatgcagaagtcggtggtggtggcggtggac 177
           ||||| ||||| |||||||||||||||||||||||||||||||||||||| || ||||||
Sbjct: 162 ccggttgtggggatcgtggtgtcgaacaagatgcagaagtcggtggtggttgcagtggac 221

                                                                       
Query: 178 cgcctcttccacaacaaggtgtacaaccgctacgtcaagcgcacctccaagttcatggcg 237
           || ||||||||||||||||| |||||||||||||||||||||||||||||||||||||| 
Sbjct: 222 cgtctcttccacaacaaggtatacaaccgctacgtcaagcgcacctccaagttcatggca 281

                                                                       
Query: 238 cacgacgaggccgagacctgcaacatcggcgacagggttaggctggatccttctaggccg 297
           |||||||| | |||  |||||||||| |||||| ||||||||||||||||||||||||| 
Sbjct: 282 cacgacgatgacgactcctgcaacattggcgaccgggttaggctggatccttctaggccc 341

                                                                   
Query: 298 ttgagcaaaaacaagcattggattgttgccgaggttcttcgcagagctaagatgta 353
           ||||||| | ||||||| ||| ||||||| ||  |||| |||||||||||| ||||
Sbjct: 342 ttgagcagacacaagcactgggttgttgctgaaattctccgcagagctaaggtgta 397



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>gb|BT019324.1| Zea mays clone Contig1032.F mRNA sequence
          Length = 647

 Score =  281 bits (142), Expect = 2e-72
 Identities = 208/230 (90%)
 Strand = Plus / Plus

                                                                       
Query: 124 gtgggtatcgtggtgtcgaacaagatgcagaagtcggtggtggtggcggtggaccgcctc 183
           ||||| |||||||||||||||||||||||||||||||||||||| || ||||||||||||
Sbjct: 105 gtggggatcgtggtgtcgaacaagatgcagaagtcggtggtggttgcagtggaccgcctc 164

                                                                       
Query: 184 ttccacaacaaggtgtacaaccgctacgtcaagcgcacctccaagttcatggcgcacgac 243
           |||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 165 ttccacaacaaggtatacaaccgctacgtcaagcgcacctccaagttcatggcacacgac 224

                                                                       
Query: 244 gaggccgagacctgcaacatcggcgacagggttaggctggatccttctaggccgttgagc 303
           || | | |  |||||||||| |||||| ||||||||||||||||||||||||| ||||||
Sbjct: 225 gatgaccacccctgcaacattggcgaccgggttaggctggatccttctaggcccttgagc 284

                                                             
Query: 304 aaaaacaagcattggattgttgccgaggttcttcgcagagctaagatgta 353
           | | ||||||| ||| ||||||| ||  |||| |||||||||||| ||||
Sbjct: 285 agacacaagcactgggttgttgctgaaattctccgcagagctaaggtgta 334



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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8
          Length = 28434780

 Score =  226 bits (114), Expect = 1e-55
 Identities = 147/158 (93%)
 Strand = Plus / Minus

                                                                            
Query: 118      ccggtggtgggtatcgtggtgtcgaacaagatgcagaagtcggtggtggtggcggtggac 177
                ||||||||||| ||||||||||||||||||||||||||||||||||||||||| || |||
Sbjct: 16543199 ccggtggtggggatcgtggtgtcgaacaagatgcagaagtcggtggtggtggccgtcgac 16543140

                                                                            
Query: 178      cgcctcttccacaacaaggtgtacaaccgctacgtcaagcgcacctccaagttcatggcg 237
                |||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 16543139 cgcctcttccaccacaagatgtacaaccgctacgtcaagcgcacctccaagttcatggcg 16543080

                                                      
Query: 238      cacgacgaggccgagacctgcaacatcggcgacagggt 275
                ||||| ||| |||||  ||| |||||||||||| ||||
Sbjct: 16543079 cacgatgagaccgaggactgtaacatcggcgaccgggt 16543042



 Score = 83.8 bits (42), Expect = 1e-12
 Identities = 72/82 (87%)
 Strand = Plus / Minus

                                                                            
Query: 273      ggttaggctggatccttctaggccgttgagcaaaaacaagcattggattgttgccgaggt 332
                ||||| ||| |||||||||||||| ||||||||||  ||||| ||| ||||||||||| |
Sbjct: 16539634 ggttaagcttgatccttctaggcccttgagcaaaaggaagcactgggttgttgccgagat 16539575

                                      
Query: 333      tcttcgcagagctaagatgtat 354
                |||||| ||||||||| |||||
Sbjct: 16539574 tcttcgtagagctaaggtgtat 16539553



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>dbj|AP005628.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1014_E02
          Length = 159669

 Score =  226 bits (114), Expect = 1e-55
 Identities = 147/158 (93%)
 Strand = Plus / Minus

                                                                         
Query: 118   ccggtggtgggtatcgtggtgtcgaacaagatgcagaagtcggtggtggtggcggtggac 177
             ||||||||||| ||||||||||||||||||||||||||||||||||||||||| || |||
Sbjct: 15023 ccggtggtggggatcgtggtgtcgaacaagatgcagaagtcggtggtggtggccgtcgac 14964

                                                                         
Query: 178   cgcctcttccacaacaaggtgtacaaccgctacgtcaagcgcacctccaagttcatggcg 237
             |||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 14963 cgcctcttccaccacaagatgtacaaccgctacgtcaagcgcacctccaagttcatggcg 14904

                                                   
Query: 238   cacgacgaggccgagacctgcaacatcggcgacagggt 275
             ||||| ||| |||||  ||| |||||||||||| ||||
Sbjct: 14903 cacgatgagaccgaggactgtaacatcggcgaccgggt 14866



 Score = 83.8 bits (42), Expect = 1e-12
 Identities = 72/82 (87%)
 Strand = Plus / Minus

                                                                         
Query: 273   ggttaggctggatccttctaggccgttgagcaaaaacaagcattggattgttgccgaggt 332
             ||||| ||| |||||||||||||| ||||||||||  ||||| ||| ||||||||||| |
Sbjct: 11458 ggttaagcttgatccttctaggcccttgagcaaaaggaagcactgggttgttgccgagat 11399

                                   
Query: 333   tcttcgcagagctaagatgtat 354
             |||||| ||||||||| |||||
Sbjct: 11398 tcttcgtagagctaaggtgtat 11377



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>dbj|AP005523.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0488B06
          Length = 154764

 Score =  226 bits (114), Expect = 1e-55
 Identities = 147/158 (93%)
 Strand = Plus / Minus

                                                                          
Query: 118    ccggtggtgggtatcgtggtgtcgaacaagatgcagaagtcggtggtggtggcggtggac 177
              ||||||||||| ||||||||||||||||||||||||||||||||||||||||| || |||
Sbjct: 153855 ccggtggtggggatcgtggtgtcgaacaagatgcagaagtcggtggtggtggccgtcgac 153796

                                                                          
Query: 178    cgcctcttccacaacaaggtgtacaaccgctacgtcaagcgcacctccaagttcatggcg 237
              |||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 153795 cgcctcttccaccacaagatgtacaaccgctacgtcaagcgcacctccaagttcatggcg 153736

                                                    
Query: 238    cacgacgaggccgagacctgcaacatcggcgacagggt 275
              ||||| ||| |||||  ||| |||||||||||| ||||
Sbjct: 153735 cacgatgagaccgaggactgtaacatcggcgaccgggt 153698



 Score = 83.8 bits (42), Expect = 1e-12
 Identities = 72/82 (87%)
 Strand = Plus / Minus

                                                                          
Query: 273    ggttaggctggatccttctaggccgttgagcaaaaacaagcattggattgttgccgaggt 332
              ||||| ||| |||||||||||||| ||||||||||  ||||| ||| ||||||||||| |
Sbjct: 150290 ggttaagcttgatccttctaggcccttgagcaaaaggaagcactgggttgttgccgagat 150231

                                    
Query: 333    tcttcgcagagctaagatgtat 354
              |||||| ||||||||| |||||
Sbjct: 150230 tcttcgtagagctaaggtgtat 150209



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>ref|NM_112774.2| Arabidopsis thaliana structural constituent of ribosome (AT3G18880)
           mRNA, complete cds
          Length = 530

 Score = 87.7 bits (44), Expect = 7e-14
 Identities = 155/192 (80%)
 Strand = Plus / Plus

                                                                       
Query: 133 gtggtgtcgaacaagatgcagaagtcggtggtggtggcggtggaccgcctcttccacaac 192
           |||||||||||||| ||||||| |||||||||||| || || ||| | ||||||||||| 
Sbjct: 32  gtggtgtcgaacaaaatgcagatgtcggtggtggtagccgtcgacagactcttccacaat 91

                                                                       
Query: 193 aaggtgtacaaccgctacgtcaagcgcacctccaagttcatggcgcacgacgaggccgag 252
           ||  | ||||| || || |||||||| || |||||||||||||| ||||| ||    || 
Sbjct: 92  aatatctacaatcgatatgtcaagcgtacttccaagttcatggctcacgatgaaaaggac 151

                                                                       
Query: 253 acctgcaacatcggcgacagggttaggctggatccttctaggccgttgagcaaaaacaag 312
            |||| |||||||||||  | || |   |||||||||| ||||| ||||||||  | |||
Sbjct: 152 tcctgtaacatcggcgatcgagtgaaattggatccttcaaggcctttgagcaagcataag 211

                       
Query: 313 cattggattgtt 324
           ||||||||||||
Sbjct: 212 cattggattgtt 223



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>gb|BT004700.1| Arabidopsis thaliana At3g18880 gene, complete cds
          Length = 318

 Score = 87.7 bits (44), Expect = 7e-14
 Identities = 155/192 (80%)
 Strand = Plus / Plus

                                                                       
Query: 133 gtggtgtcgaacaagatgcagaagtcggtggtggtggcggtggaccgcctcttccacaac 192
           |||||||||||||| ||||||| |||||||||||| || || ||| | ||||||||||| 
Sbjct: 22  gtggtgtcgaacaaaatgcagatgtcggtggtggtagccgtcgacagactcttccacaat 81

                                                                       
Query: 193 aaggtgtacaaccgctacgtcaagcgcacctccaagttcatggcgcacgacgaggccgag 252
           ||  | ||||| || || |||||||| || |||||||||||||| ||||| ||    || 
Sbjct: 82  aatatctacaatcgatatgtcaagcgtacttccaagttcatggctcacgatgaaaaggac 141

                                                                       
Query: 253 acctgcaacatcggcgacagggttaggctggatccttctaggccgttgagcaaaaacaag 312
            |||| |||||||||||  | || |   |||||||||| ||||| ||||||||  | |||
Sbjct: 142 tcctgtaacatcggcgatcgagtgaaattggatccttcaaggcctttgagcaagcataag 201

                       
Query: 313 cattggattgtt 324
           ||||||||||||
Sbjct: 202 cattggattgtt 213



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>dbj|AK118396.1| Arabidopsis thaliana At3g18880 mRNA for putative ribosomal protein,
           complete cds, clone: RAFL19-65-I02
          Length = 530

 Score = 87.7 bits (44), Expect = 7e-14
 Identities = 155/192 (80%)
 Strand = Plus / Plus

                                                                       
Query: 133 gtggtgtcgaacaagatgcagaagtcggtggtggtggcggtggaccgcctcttccacaac 192
           |||||||||||||| ||||||| |||||||||||| || || ||| | ||||||||||| 
Sbjct: 32  gtggtgtcgaacaaaatgcagatgtcggtggtggtagccgtcgacagactcttccacaat 91

                                                                       
Query: 193 aaggtgtacaaccgctacgtcaagcgcacctccaagttcatggcgcacgacgaggccgag 252
           ||  | ||||| || || |||||||| || |||||||||||||| ||||| ||    || 
Sbjct: 92  aatatctacaatcgatatgtcaagcgtacttccaagttcatggctcacgatgaaaaggac 151

                                                                       
Query: 253 acctgcaacatcggcgacagggttaggctggatccttctaggccgttgagcaaaaacaag 312
            |||| |||||||||||  | || |   |||||||||| ||||| ||||||||  | |||
Sbjct: 152 tcctgtaacatcggcgatcgagtgaaattggatccttcaaggcctttgagcaagcataag 211

                       
Query: 313 cattggattgtt 324
           ||||||||||||
Sbjct: 212 cattggattgtt 223



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>ref|NM_103830.2| Arabidopsis thaliana EMB1129; structural constituent of ribosome
           (EMB1129) mRNA, complete cds
          Length = 831

 Score = 83.8 bits (42), Expect = 1e-12
 Identities = 156/194 (80%)
 Strand = Plus / Plus

                                                                       
Query: 133 gtggtgtcgaacaagatgcagaagtcggtggtggtggcggtggaccgcctcttccacaac 192
           ||||| |||||||||||||| || || || ||||| || || ||  | ||||||||||||
Sbjct: 138 gtggtatcgaacaagatgcaaaaatctgtagtggtcgccgtcgatagactcttccacaac 197

                                                                       
Query: 193 aaggtgtacaaccgctacgtcaagcgcacctccaagttcatggcgcacgacgaggccgag 252
           ||  | ||||| ||||||||||| || || ||||| |||||||| ||||||||    || 
Sbjct: 198 aaaatctacaatcgctacgtcaaacgaacttccaaattcatggctcacgacgacaaagac 257

                                                                       
Query: 253 acctgcaacatcggcgacagggttaggctggatccttctaggccgttgagcaaaaacaag 312
            ||||||||||||||||  | || | | | ||||| || ||||| |||||||| || |||
Sbjct: 258 gcctgcaacatcggcgatcgagtgaagttagatccatcaaggcctttgagcaagaataag 317

                         
Query: 313 cattggattgttgc 326
           ||||||||||||||
Sbjct: 318 cattggattgttgc 331



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>gb|BT005147.1| Arabidopsis thaliana clone U50950 putative 40S ribosomal protein
           S17 (At1g49400) mRNA, complete cds
          Length = 382

 Score = 83.8 bits (42), Expect = 1e-12
 Identities = 156/194 (80%)
 Strand = Plus / Plus

                                                                       
Query: 133 gtggtgtcgaacaagatgcagaagtcggtggtggtggcggtggaccgcctcttccacaac 192
           ||||| |||||||||||||| || || || ||||| || || ||  | ||||||||||||
Sbjct: 22  gtggtatcgaacaagatgcaaaaatctgtagtggtcgccgtcgatagactcttccacaac 81

                                                                       
Query: 193 aaggtgtacaaccgctacgtcaagcgcacctccaagttcatggcgcacgacgaggccgag 252
           ||  | ||||| ||||||||||| || || ||||| |||||||| ||||||||    || 
Sbjct: 82  aaaatctacaatcgctacgtcaaacgaacttccaaattcatggctcacgacgacaaagac 141

                                                                       
Query: 253 acctgcaacatcggcgacagggttaggctggatccttctaggccgttgagcaaaaacaag 312
            ||||||||||||||||  | || | | | ||||| || ||||| |||||||| || |||
Sbjct: 142 gcctgcaacatcggcgatcgagtgaagttagatccatcaaggcctttgagcaagaataag 201

                         
Query: 313 cattggattgttgc 326
           ||||||||||||||
Sbjct: 202 cattggattgttgc 215



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>dbj|AP002039.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MCB22
          Length = 29694

 Score = 83.8 bits (42), Expect = 1e-12
 Identities = 93/110 (84%)
 Strand = Plus / Plus

                                                                         
Query: 133   gtggtgtcgaacaagatgcagaagtcggtggtggtggcggtggaccgcctcttccacaac 192
             |||||||||||||| ||||||| |||||||||||| || || ||| | ||||||||||| 
Sbjct: 17935 gtggtgtcgaacaaaatgcagatgtcggtggtggtagccgtcgacagactcttccacaat 17994

                                                               
Query: 193   aaggtgtacaaccgctacgtcaagcgcacctccaagttcatggcgcacga 242
             ||  | ||||| || || |||||||| || |||||||||||||| |||||
Sbjct: 17995 aatatctacaatcgatatgtcaagcgtacttccaagttcatggctcacga 18044



 Score = 48.1 bits (24), Expect = 0.060
 Identities = 39/44 (88%)
 Strand = Plus / Plus

                                                         
Query: 281   tggatccttctaggccgttgagcaaaaacaagcattggattgtt 324
             |||||||||| ||||| ||||||||  | |||||||||||||||
Sbjct: 18247 tggatccttcaaggcctttgagcaagcataagcattggattgtt 18290



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>dbj|AK118089.1| Arabidopsis thaliana At1g49400 mRNA for unknown protein, complete
           cds, clone: RAFL19-34-E13
          Length = 829

 Score = 83.8 bits (42), Expect = 1e-12
 Identities = 156/194 (80%)
 Strand = Plus / Plus

                                                                       
Query: 133 gtggtgtcgaacaagatgcagaagtcggtggtggtggcggtggaccgcctcttccacaac 192
           ||||| |||||||||||||| || || || ||||| || || ||  | ||||||||||||
Sbjct: 138 gtggtatcgaacaagatgcaaaaatctgtagtggtcgccgtcgatagactcttccacaac 197

                                                                       
Query: 193 aaggtgtacaaccgctacgtcaagcgcacctccaagttcatggcgcacgacgaggccgag 252
           ||  | ||||| ||||||||||| || || ||||| |||||||| ||||||||    || 
Sbjct: 198 aaaatctacaatcgctacgtcaaacgaacttccaaattcatggctcacgacgacaaagac 257

                                                                       
Query: 253 acctgcaacatcggcgacagggttaggctggatccttctaggccgttgagcaaaaacaag 312
            ||||||||||||||||  | || | | | ||||| || ||||| |||||||| || |||
Sbjct: 258 gcctgcaacatcggcgatcgagtgaagttagatccatcaaggcctttgagcaagaataag 317

                         
Query: 313 cattggattgttgc 326
           ||||||||||||||
Sbjct: 318 cattggattgttgc 331



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>gb|AC007504.3| Arabidopsis thaliana chromosome I BAC F13F21 genomic sequence, complete
             sequence
          Length = 125021

 Score = 65.9 bits (33), Expect = 3e-07
 Identities = 93/113 (82%)
 Strand = Plus / Minus

                                                                         
Query: 133   gtggtgtcgaacaagatgcagaagtcggtggtggtggcggtggaccgcctcttccacaac 192
             ||||| |||||||||||||| || || || ||||| || || ||  | ||||||||||||
Sbjct: 60732 gtggtatcgaacaagatgcaaaaatctgtagtggtcgccgtcgatagactcttccacaac 60673

                                                                  
Query: 193   aaggtgtacaaccgctacgtcaagcgcacctccaagttcatggcgcacgacga 245
             ||  | ||||| ||||||||||| || || ||||| |||||||| ||||||||
Sbjct: 60672 aaaatctacaatcgctacgtcaaacgaacttccaaattcatggctcacgacga 60620



 Score = 48.1 bits (24), Expect = 0.060
 Identities = 39/44 (88%)
 Strand = Plus / Minus

                                                         
Query: 283   gatccttctaggccgttgagcaaaaacaagcattggattgttgc 326
             ||||| || ||||| |||||||| || |||||||||||||||||
Sbjct: 60445 gatccatcaaggcctttgagcaagaataagcattggattgttgc 60402



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>emb|BX818605.1|CNS0AAWN Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL87ZF06 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 706

 Score = 63.9 bits (32), Expect = 1e-06
 Identities = 92/112 (82%)
 Strand = Plus / Plus

                                                                       
Query: 133 gtggtgtcgaacaagatgcagaagtcggtggtggtggcggtggaccgcctcttccacaac 192
           ||||| |||||||||||||| || || || ||||| || || ||  | ||||||||||||
Sbjct: 126 gtggtatcgaacaagatgcaaaaatctgtagtggtcgccgtcgatagactcttccacaac 185

                                                               
Query: 193 aaggtgtacaaccgctacgtcaagcgcacctccaagttcatggcgcacgacg 244
           ||  | ||||| ||||||||||| || || ||||| |||||||| |||||||
Sbjct: 186 aaaatctacaatcgctacgtcaaacgaacttccaaattcatggctcacgacg 237



 Score = 50.1 bits (25), Expect = 0.015
 Identities = 61/73 (83%)
 Strand = Plus / Plus

                                                                       
Query: 254 cctgcaacatcggcgacagggttaggctggatccttctaggccgttgagcaaaaacaagc 313
           ||||||||||||||||  | || | | | ||||| || ||||| |||||||| || ||||
Sbjct: 250 cctgcaacatcggcgatcgagtgaagttagatccatcaaggcctttgagcaagaataagc 309

                        
Query: 314 attggattgttgc 326
           |||||||||||||
Sbjct: 310 attggattgttgc 322



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>emb|Y08858.1|NPS40RS17 N.plumbaginifolia mRNA for 40S ribosomal protein S17
          Length = 564

 Score = 61.9 bits (31), Expect = 4e-06
 Identities = 97/119 (81%)
 Strand = Plus / Plus

                                                                       
Query: 118 ccggtggtgggtatcgtggtgtcgaacaagatgcagaagtcggtggtggtggcggtggac 177
           ||||||||||| |  || ||||| ||||| | |||||| || || |||||||| || || 
Sbjct: 32  ccggtggtgggaacagtagtgtcaaacaaaaggcagaaatcagtagtggtggctgtagat 91

                                                                      
Query: 178 cgcctcttccacaacaaggtgtacaaccgctacgtcaagcgcacctccaagttcatggc 236
            | ||||||||||||||| | ||||| ||||| || ||||||||||| || ||||||||
Sbjct: 92  agactcttccacaacaagctttacaatcgctatgtgaagcgcacctctaaattcatggc 150



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>dbj|AP006716.1| Staphylococcus haemolyticus JCSC1435 DNA, complete genome
          Length = 2685015

 Score = 44.1 bits (22), Expect = 0.93
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 929    attctatctgaataatatattg 950
              ||||||||||||||||||||||
Sbjct: 592168 attctatctgaataatatattg 592147



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>emb|CR848038.1| Chlamydophila abortus strain S26/3, complete genome
          Length = 1144377

 Score = 44.1 bits (22), Expect = 0.93
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                           
Query: 146   agatgcagaagtcggtggtggtggcggtgg 175
             ||||| |||||| |||||||||||||||||
Sbjct: 78232 agatggagaagttggtggtggtggcggtgg 78203



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>ref|XM_001224812.1| Chaetomium globosum CBS 148.51 hypothetical protein (CHGG_07157)
           mRNA, complete cds
          Length = 804

 Score = 42.1 bits (21), Expect = 3.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 233 tggcgcacgacgaggccgaga 253
           |||||||||||||||||||||
Sbjct: 410 tggcgcacgacgaggccgaga 430



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>gb|AC103769.2| Homo sapiens chromosome 8, clone RP11-110G21, complete sequence
          Length = 138097

 Score = 42.1 bits (21), Expect = 3.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 304  aaaaacaagcattggattgtt 324
            |||||||||||||||||||||
Sbjct: 9906 aaaaacaagcattggattgtt 9886



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>gb|AC090186.7| Homo sapiens chromosome 8, clone RP11-11C20, complete sequence
          Length = 143753

 Score = 42.1 bits (21), Expect = 3.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 304   aaaaacaagcattggattgtt 324
             |||||||||||||||||||||
Sbjct: 55391 aaaaacaagcattggattgtt 55411



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>gb|AC020916.8| Homo sapiens chromosome 19 clone CTD-3252C9, complete sequence
          Length = 214530

 Score = 42.1 bits (21), Expect = 3.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 423   ctgaagatccccagagcccaacaca 447
             |||||||||||||||||||| ||||
Sbjct: 75178 ctgaagatccccagagcccagcaca 75154


  Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
  GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
    Posted date:  Dec 3, 2006  5:45 PM
  Number of letters in database: 18,610,659,111
  Number of sequences in database:  4,638,285
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4638285
Number of Hits to DB: 156,925,331
Number of extensions: 8943018
Number of successful extensions: 206908
Number of sequences better than 10.0: 26
Number of HSP's gapped: 206898
Number of HSP's successfully gapped: 38
Length of query: 977
Length of database: 18,610,659,111
Length adjustment: 23
Effective length of query: 954
Effective length of database: 18,503,978,556
Effective search space: 17652795542424
Effective search space used: 17652795542424
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 14 (28.2 bits)
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