ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf139g02 |
|---|---|
| Clone Library Name | barley_pub |
>Q753M0:PPCK_ASHGO Phosphoenolpyruvate carboxykinase [ATP] - Ashbya gossypii (Yeast)| (Eremothecium gossypii) Length = 541 Score = 34.7 bits (78), Expect = 1.1 Identities = 26/93 (27%), Positives = 42/93 (45%), Gaps = 1/93 (1%) Frame = +2 Query: 710 IHRVEYRIIRAEKIEKH-ARAWGNADVIVFNSYLWWRKQKPDMKMKVMYGSFEDGDAKLD 886 +H ++Y + AEK+ +H A AW +SY K+ P + + S DG Sbjct: 412 LHPMKYATMLAEKMSQHNASAWLINTGWTGSSYTAGGKRCPLKYTRAILDSIHDGTLAQA 471 Query: 887 EVEMVEGFEIALKKLTEWVGANVNNKTKIYFAG 985 E E + F +++ K E V A + N K + G Sbjct: 472 EYETLPVFGLSIPKAVEGVPAELLNPAKNWVEG 504
>Q8TG24:MET3_CRYNV Sulfate adenylyltransferase - Cryptococcus neoformans var. grubii| (Filobasidiella neoformans var. grubii) Length = 581 Score = 33.9 bits (76), Expect = 1.9 Identities = 14/34 (41%), Positives = 21/34 (61%) Frame = -2 Query: 304 ALLPGAPHGLAHELVRPLHLRVAAPRRGHLHLLV 203 AL+P P G+AH + PL +R+A PR H ++ Sbjct: 253 ALMPSYPEGMAHLALLPLAMRMAGPREAVWHAVI 286
>Q5KB71:MET3_CRYNE Sulfate adenylyltransferase - Cryptococcus neoformans| (Filobasidiella neoformans) Length = 581 Score = 33.9 bits (76), Expect = 1.9 Identities = 14/34 (41%), Positives = 21/34 (61%) Frame = -2 Query: 304 ALLPGAPHGLAHELVRPLHLRVAAPRRGHLHLLV 203 AL+P P G+AH + PL +R+A PR H ++ Sbjct: 253 ALMPSYPEGMAHLALLPLAMRMAGPREAVWHAVI 286
>Q8BY35:FGD2_MOUSE FYVE, RhoGEF and PH domain-containing protein 2 - Mus musculus| (Mouse) Length = 655 Score = 32.7 bits (73), Expect = 4.3 Identities = 24/79 (30%), Positives = 36/79 (45%), Gaps = 6/79 (7%) Frame = -3 Query: 324 HRPKDQLHSSPEPLTASPMSSSVHCTCASRRPAAATFTSWCR------CWTASCTCDSWP 163 H P+ QL SPEP A P+ ++ + RP + T+ S + W SC P Sbjct: 38 HSPEHQLSLSPEPWEAPPVKEALK---SEFRPVSRTYLSSLKNKLSSGAWRRSCQPGVSP 94 Query: 162 RSKSRETELTTMKKATREL 106 +++E E K+ REL Sbjct: 95 GPETQEPE---EKRVVREL 110
>O70521:RGS19_RAT Regulator of G-protein signaling 19 - Rattus norvegicus (Rat)| Length = 216 Score = 32.3 bits (72), Expect = 5.6 Identities = 23/84 (27%), Positives = 35/84 (41%), Gaps = 4/84 (4%) Frame = -3 Query: 327 THRPKDQLHSSPEPLTASPMSSSVHCTCASRRPAAATFTSWCRCWTASCTCDSWPRSKSR 148 T ++ H+ PE P SS H S P+ C CW C+C SW + + R Sbjct: 3 TPHEAEKQHTGPEEADRPPSMSS-HDAAPSGPPSR---NPCCLCWCCCCSC-SWNQERQR 57 Query: 147 ETELTTMKK----ATRELTTPRRP 88 +++ K + E+ TP P Sbjct: 58 AWQVSRESKLQPLPSCEVCTPPSP 81
>Q9CX84:RGS19_MOUSE Regulator of G-protein signaling 19 - Mus musculus (Mouse)| Length = 216 Score = 32.3 bits (72), Expect = 5.6 Identities = 23/84 (27%), Positives = 35/84 (41%), Gaps = 4/84 (4%) Frame = -3 Query: 327 THRPKDQLHSSPEPLTASPMSSSVHCTCASRRPAAATFTSWCRCWTASCTCDSWPRSKSR 148 T ++ H+ PE P SS H S P+ C CW C+C SW + + R Sbjct: 3 TPHEAEKQHTGPEEADRPPSMSS-HDAAPSGPPSR---NPCCLCWCCCCSC-SWNQERQR 57 Query: 147 ETELTTMKK----ATRELTTPRRP 88 +++ K + E+ TP P Sbjct: 58 AWQVSRESKLQPLPSCEVCTPPSP 81
>P32023:KGP25_DROME cGMP-dependent protein kinase, isozyme 2 forms cD5/T2 - Drosophila| melanogaster (Fruit fly) Length = 934 Score = 32.3 bits (72), Expect = 5.6 Identities = 36/128 (28%), Positives = 49/128 (38%), Gaps = 13/128 (10%) Frame = +2 Query: 524 GDSINRNQWVSMVCMVEA-----SIPEGQKMRVYNGSLISFTAFEYNATIDFYWSPLILE 688 G I+ + W V M E MR YN L A E+ I S LI + Sbjct: 797 GHDISADYWSLGVLMFELLTGTPPFTGSDPMRTYNIILKGIDAIEFPRNITRNASNLIKK 856 Query: 689 SNSDNPIIHRVEYRIIRAEKIEKHARAWGNADVIVFNSYLWWRKQ--------KPDMKMK 844 DNP R+ Y+ +I+KH W F+ + WW Q KP +K Sbjct: 857 LCRDNP-AERLGYQRGGISEIQKH--KW-------FDGFYWWGLQNCTLEPPIKPAVKSV 906 Query: 845 VMYGSFED 868 V +F+D Sbjct: 907 VDTTNFDD 914
>Q03043:KGP24_DROME cGMP-dependent protein kinase, isozyme 2 forms cD4/T1/T3A/T3B -| Drosophila melanogaster (Fruit fly) Length = 1088 Score = 32.3 bits (72), Expect = 5.6 Identities = 36/128 (28%), Positives = 49/128 (38%), Gaps = 13/128 (10%) Frame = +2 Query: 524 GDSINRNQWVSMVCMVEA-----SIPEGQKMRVYNGSLISFTAFEYNATIDFYWSPLILE 688 G I+ + W V M E MR YN L A E+ I S LI + Sbjct: 951 GHDISADYWSLGVLMFELLTGTPPFTGSDPMRTYNIILKGIDAIEFPRNITRNASNLIKK 1010 Query: 689 SNSDNPIIHRVEYRIIRAEKIEKHARAWGNADVIVFNSYLWWRKQ--------KPDMKMK 844 DNP R+ Y+ +I+KH W F+ + WW Q KP +K Sbjct: 1011 LCRDNP-AERLGYQRGGISEIQKH--KW-------FDGFYWWGLQNCTLEPPIKPAVKSV 1060 Query: 845 VMYGSFED 868 V +F+D Sbjct: 1061 VDTTNFDD 1068
>Q60289:Y3532_METJA Uncharacterized protein MJECL32 - Methanococcus jannaschii| Length = 438 Score = 32.0 bits (71), Expect = 7.3 Identities = 17/64 (26%), Positives = 32/64 (50%) Frame = +2 Query: 677 LILESNSDNPIIHRVEYRIIRAEKIEKHARAWGNADVIVFNSYLWWRKQKPDMKMKVMYG 856 +++ N + +I + + I+ E++EK+ + N VI+ Y+ K K V Y Sbjct: 109 ILVNDNDTHVLIFECKSKSIKKEQLEKYLKLKENLHVIINKGYISVTKNPRLYKSDVSYM 168 Query: 857 SFED 868 SF+D Sbjct: 169 SFDD 172
>P01013:OVALX_CHICK Ovalbumin-related protein X - Gallus gallus (Chicken)| Length = 232 Score = 32.0 bits (71), Expect = 7.3 Identities = 20/56 (35%), Positives = 27/56 (48%), Gaps = 7/56 (12%) Frame = +2 Query: 827 PDMKMKVMYGSFEDGDAKL-----DEVEMVEGFE--IALKKLTEWVGANVNNKTKI 973 P KMK++ F GD + DEV +E E I +KLTEW N K ++ Sbjct: 68 PAEKMKILELPFASGDLSMLVLLPDEVSDLERIEKTINFEKLTEWTNPNTMEKRRV 123
>Q8KA08:Y126_BUCAP UPF0092 membrane protein BUsg_126 - Buchnera aphidicola subsp.| Schizaphis graminum Length = 110 Score = 31.6 bits (70), Expect = 9.6 Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 2/66 (3%) Frame = +2 Query: 785 VIVFNSYLWWRKQKPDMKMKVMYGSFEDGDAKLDEVEMVEGFEIALKKLTE--WVGANVN 958 +++F L+ +QK D + K + S GD EV GF +KK+TE +V +N Sbjct: 31 ILIFYFMLFRPQQKKDKEHKNLMNSIAPGD----EVMTTSGFLGRVKKVTENGYVLLQLN 86 Query: 959 NKTKIY 976 N T+I+ Sbjct: 87 NTTEIF 92
>Q8BMQ2:TF3C4_MOUSE General transcription factor 3C polypeptide 4 - Mus musculus| (Mouse) Length = 817 Score = 31.6 bits (70), Expect = 9.6 Identities = 17/50 (34%), Positives = 25/50 (50%) Frame = +2 Query: 425 YQHWRWQPDGCDLPRFNATKLLEKLRNKRMVFVGDSINRNQWVSMVCMVE 574 +++ W P GCD N LL L + V ++NR QWV +V + E Sbjct: 160 FKYTSWSPMGCDA---NGRCLLAALTMDNRLTVQVNLNRLQWVQLVDLTE 206
>Q9UKN8:TF3C4_HUMAN General transcription factor 3C polypeptide 4 - Homo sapiens| (Human) Length = 822 Score = 31.6 bits (70), Expect = 9.6 Identities = 16/50 (32%), Positives = 25/50 (50%) Frame = +2 Query: 425 YQHWRWQPDGCDLPRFNATKLLEKLRNKRMVFVGDSINRNQWVSMVCMVE 574 +++ W P GCD N LL L + + ++NR QWV +V + E Sbjct: 164 FKYTSWSPMGCDA---NGRCLLAALTMDNRLTIQANLNRLQWVQLVDLTE 210
>P49795:RGS19_HUMAN Regulator of G-protein signaling 19 - Homo sapiens (Human)| Length = 217 Score = 31.6 bits (70), Expect = 9.6 Identities = 21/68 (30%), Positives = 31/68 (45%) Frame = -3 Query: 324 HRPKDQLHSSPEPLTASPMSSSVHCTCASRRPAAATFTSWCRCWTASCTCDSWPRSKSRE 145 H + Q+ + PE P SS H T + PAA + C CW C+C SW + + R Sbjct: 5 HEAEKQI-TGPEEADRPPSMSS-HDTAS---PAAPSRNPCCLCWCCCCSC-SWNQERRRA 58 Query: 144 TELTTMKK 121 + + K Sbjct: 59 WQASRESK 66
>Q5HMF6:LEUD_STAEQ 3-isopropylmalate dehydratase small subunit - Staphylococcus| epidermidis (strain ATCC 35984 / RP62A) Length = 189 Score = 31.6 bits (70), Expect = 9.6 Identities = 21/73 (28%), Positives = 32/73 (43%), Gaps = 4/73 (5%) Frame = +2 Query: 326 VYDNASQPL-YSGLNCSFIFDEVACE---KYGRNDTRYQHWRWQPDGCDLPRFNATKLLE 493 +Y + PL Y ++ I +V + K G + WR+ PDG D P FN K Sbjct: 8 IYTGKTVPLFYDNIDTDQIIPKVHLKRVSKSGFGPFAFDEWRYLPDGSDNPDFNPNK--P 65 Query: 494 KLRNKRMVFVGDS 532 K ++ GD+ Sbjct: 66 KYHGASILITGDN 78
>P30855:EVGS_ECOLI Sensor protein evgS precursor - Escherichia coli| Length = 1197 Score = 31.6 bits (70), Expect = 9.6 Identities = 24/75 (32%), Positives = 41/75 (54%), Gaps = 1/75 (1%) Frame = +2 Query: 485 LLEKLRNKRMVFVGDSINRNQWVSMVCMVEASIPEGQKMRVYNGSLISF-TAFEYNATID 661 LL +R +R V GD N+ +S + S+P + + G++IS +AFE+ T D Sbjct: 557 LLRSVR-RRKVIQGDLENQ---ISFRKALSDSLPNPTYVVNWQGNVISHNSAFEHYFTAD 612 Query: 662 FYWSPLILESNSDNP 706 +Y + ++ NSD+P Sbjct: 613 YYKNAMLPLENSDSP 627 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 261,916,196 Number of extensions: 6021935 Number of successful extensions: 18084 Number of sequences better than 10.0: 16 Number of HSP's gapped: 18072 Number of HSP's successfully gapped: 16 Length of query: 520 Length of database: 100,686,439 Length adjustment: 118 Effective length of query: 402 Effective length of database: 68,319,629 Effective search space: 27464490858 Effective search space used: 27464490858 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
