ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf139g02 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_001072471.1| Oryza sativa (japonica cultivar-group) Os12g0106300 (Os12g0106300) mRNA, complete cds Length = 1858 Score = 414 bits (209), Expect = e-112 Identities = 622/759 (81%), Gaps = 3/759 (0%) Strand = Plus / Plus Query: 295 ggaggagtgcaactggtccttgggacggtgggtgtacgacaacgcctcccagccgctcta 354 |||||| ||||||||||| |||||||||||||||||||||||||| || | ||| ||||| Sbjct: 594 ggaggactgcaactggtcgttgggacggtgggtgtacgacaacgcgtcgcggccactcta 653 Query: 355 ctccggcctcaactgctccttcatcttcgacgaggtcgcctgcgagaagtacggccggaa 414 ||||||| | || ||||||||||||||||||||||| |||||||| ||||| || |||| Sbjct: 654 ctccggcttgaagtgctccttcatcttcgacgaggtggcctgcgacaagtatggaaggaa 713 Query: 415 tgataccaggtaccagcattggagatggcagcccgatggatgtgatcttccaaggttcaa 474 ||| |||| ||||||||| |||||||||||||| | || || | |||||||| ||||| Sbjct: 714 tgacaccaagtaccagcactggagatggcagcctcacggttgcaaccttccaagattcaa 773 Query: 475 cgccaccaaactgctcgaaaagctgaggaacaagaggatggtcttcgtgggcgactcaat 534 ||||| || | || |||||||| ||||||||||| |||| || |||||||| ||| | Sbjct: 774 tgccacaaagtttcttgaaaagcttaggaacaagagactggtttttgtgggcgattcagt 833 Query: 535 caacaggaaccaatgggtctccatggtttgcatggtggaggcctccatccctgaaggaca 594 ||||| || |||||||| || ||||| |||||||||||| || ||||||||| || | Sbjct: 834 aaacagaaatcaatgggtgtcgatggtgtgcatggtggagcacttcatccctgatggccg 893 Query: 595 aaagatgcgcgtttacaatggctcgcttatctccttcacggcattcgaatacaatgcgac 654 ||||||||||||||||| ||||| ||||||||||||| ||||| || ||||||||||| Sbjct: 894 caagatgcgcgtttacaacggctcccttatctccttcaaagcatttgagtacaatgcgac 953 Query: 655 aatcgacttctactggtcgccgctgatactagaatccaacagcgacaacccgataattca 714 || || ||||||||||| || ||| || | ||||| |||||||||||||| |||||||| Sbjct: 954 gatagatttctactggtcaccactgctattggaatcaaacagcgacaaccccataattca 1013 Query: 715 ccgggttgagtaccggatcatacgggcggagaagattgagaagcatgcccgtgcctgggg 774 | | || ||||||||||||||| |||| || | ||||||||| || ||| || |||| Sbjct: 1014 cagagtggagtaccggatcataagggcagacaggattgagaaacacgccaatgtctggaa 1073 Query: 775 caatgctgacgttattgttttcaactcttacctttggtggaggaagcagaagcccgatat 834 | ||||| | || || |||||||| |||||||||||||||||||||| | | ||| Sbjct: 1074 ggacgctgatttcatcgtcttcaactcctacctttggtggaggaagcagagggatggtat 1133 Query: 835 gaagatgaaggtcatgtacggctcatttgaggatggtgatgcaaagctagacgaagtgga 894 || |||||| |||||||| || ||||||||||| || ||||||||| |||| || ||| | Sbjct: 1134 gatgatgaaagtcatgtatggttcatttgaggacggggatgcaaagttagatgaggtgca 1193 Query: 895 gatggtggaaggtttcgagattgctctcaagaaactaaccgagtgggtgggagcgaatgt 954 ||||| || |||| ||||| ||||||||||||||||| || | | ||||| ||| | Sbjct: 1194 aatggttgatggttatgagatagctctcaagaaactaactgaatatcttggagccaatat 1253 Query: 955 caac---aacaagactaaaatctatttcgcaggctcgtcgcctacccatacctgggcaag 1011 |||| |||||||||| ||||| || |||||||| || ||| ||||| ||||||| || Sbjct: 1254 caacaagaacaagactagaatcttctttgcaggctcatcacctgcccattcctgggctag 1313 Query: 1012 cgactggggtggagacgacagcaacaagtgcctgaacga 1050 | ||||||| ||||| |||| ||||||||| || ||||| Sbjct: 1314 caactggggaggagatgacaacaacaagtgtctaaacga 1352 Score = 111 bits (56), Expect = 8e-21 Identities = 59/60 (98%) Strand = Plus / Plus Query: 109 ctccctcgtcgccttcttcatcgtcgtcagctccgtctccctgctcttcgaccgcggcca 168 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 330 ctccctcgtcgccttcttcatcgtcgtcagctccgtctccctcctcttcgaccgcggcca 389 Score = 73.8 bits (37), Expect = 2e-09 Identities = 49/53 (92%) Strand = Plus / Plus Query: 1247 gagcagatcgccaacccgagcagctacgccgactgcacgcattggtgcctccc 1299 |||||||| || |||||||||| |||||| ||||||||||||||||||||||| Sbjct: 1549 gagcagattgcaaacccgagcatctacgcagactgcacgcattggtgcctccc 1601 Score = 54.0 bits (27), Expect = 0.002 Identities = 78/95 (82%) Strand = Plus / Plus Query: 1088 accacggactacagcatgatggacaaggcgaagcacatcttcagaccactggagcagaaa 1147 ||||| |||||| |||||||||||||||||||| | || || || ||||||| | || Sbjct: 1390 accacagactacggcatgatggacaaggcgaaggagatatttggaacactggaaccaaag 1449 Query: 1148 ggcataagcgttcagatactcaacttcacccagct 1182 |||||| ||||||||||| ||| |||||||||| Sbjct: 1450 ggcatacatgttcagatactgaacatcacccagct 1484
>dbj|AK060755.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-032-H01, full insert sequence Length = 1858 Score = 414 bits (209), Expect = e-112 Identities = 622/759 (81%), Gaps = 3/759 (0%) Strand = Plus / Plus Query: 295 ggaggagtgcaactggtccttgggacggtgggtgtacgacaacgcctcccagccgctcta 354 |||||| ||||||||||| |||||||||||||||||||||||||| || | ||| ||||| Sbjct: 594 ggaggactgcaactggtcgttgggacggtgggtgtacgacaacgcgtcgcggccactcta 653 Query: 355 ctccggcctcaactgctccttcatcttcgacgaggtcgcctgcgagaagtacggccggaa 414 ||||||| | || ||||||||||||||||||||||| |||||||| ||||| || |||| Sbjct: 654 ctccggcttgaagtgctccttcatcttcgacgaggtggcctgcgacaagtatggaaggaa 713 Query: 415 tgataccaggtaccagcattggagatggcagcccgatggatgtgatcttccaaggttcaa 474 ||| |||| ||||||||| |||||||||||||| | || || | |||||||| ||||| Sbjct: 714 tgacaccaagtaccagcactggagatggcagcctcacggttgcaaccttccaagattcaa 773 Query: 475 cgccaccaaactgctcgaaaagctgaggaacaagaggatggtcttcgtgggcgactcaat 534 ||||| || | || |||||||| ||||||||||| |||| || |||||||| ||| | Sbjct: 774 tgccacaaagtttcttgaaaagcttaggaacaagagactggtttttgtgggcgattcagt 833 Query: 535 caacaggaaccaatgggtctccatggtttgcatggtggaggcctccatccctgaaggaca 594 ||||| || |||||||| || ||||| |||||||||||| || ||||||||| || | Sbjct: 834 aaacagaaatcaatgggtgtcgatggtgtgcatggtggagcacttcatccctgatggccg 893 Query: 595 aaagatgcgcgtttacaatggctcgcttatctccttcacggcattcgaatacaatgcgac 654 ||||||||||||||||| ||||| ||||||||||||| ||||| || ||||||||||| Sbjct: 894 caagatgcgcgtttacaacggctcccttatctccttcaaagcatttgagtacaatgcgac 953 Query: 655 aatcgacttctactggtcgccgctgatactagaatccaacagcgacaacccgataattca 714 || || ||||||||||| || ||| || | ||||| |||||||||||||| |||||||| Sbjct: 954 gatagatttctactggtcaccactgctattggaatcaaacagcgacaaccccataattca 1013 Query: 715 ccgggttgagtaccggatcatacgggcggagaagattgagaagcatgcccgtgcctgggg 774 | | || ||||||||||||||| |||| || | ||||||||| || ||| || |||| Sbjct: 1014 cagagtggagtaccggatcataagggcagacaggattgagaaacacgccaatgtctggaa 1073 Query: 775 caatgctgacgttattgttttcaactcttacctttggtggaggaagcagaagcccgatat 834 | ||||| | || || |||||||| |||||||||||||||||||||| | | ||| Sbjct: 1074 ggacgctgatttcatcgtcttcaactcctacctttggtggaggaagcagagggatggtat 1133 Query: 835 gaagatgaaggtcatgtacggctcatttgaggatggtgatgcaaagctagacgaagtgga 894 || |||||| |||||||| || ||||||||||| || ||||||||| |||| || ||| | Sbjct: 1134 gatgatgaaagtcatgtatggttcatttgaggacggggatgcaaagttagatgaggtgca 1193 Query: 895 gatggtggaaggtttcgagattgctctcaagaaactaaccgagtgggtgggagcgaatgt 954 ||||| || |||| ||||| ||||||||||||||||| || | | ||||| ||| | Sbjct: 1194 aatggttgatggttatgagatagctctcaagaaactaactgaatatcttggagccaatat 1253 Query: 955 caac---aacaagactaaaatctatttcgcaggctcgtcgcctacccatacctgggcaag 1011 |||| |||||||||| ||||| || |||||||| || ||| ||||| ||||||| || Sbjct: 1254 caacaagaacaagactagaatcttctttgcaggctcatcacctgcccattcctgggctag 1313 Query: 1012 cgactggggtggagacgacagcaacaagtgcctgaacga 1050 | ||||||| ||||| |||| ||||||||| || ||||| Sbjct: 1314 caactggggaggagatgacaacaacaagtgtctaaacga 1352 Score = 111 bits (56), Expect = 8e-21 Identities = 59/60 (98%) Strand = Plus / Plus Query: 109 ctccctcgtcgccttcttcatcgtcgtcagctccgtctccctgctcttcgaccgcggcca 168 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 330 ctccctcgtcgccttcttcatcgtcgtcagctccgtctccctcctcttcgaccgcggcca 389 Score = 73.8 bits (37), Expect = 2e-09 Identities = 49/53 (92%) Strand = Plus / Plus Query: 1247 gagcagatcgccaacccgagcagctacgccgactgcacgcattggtgcctccc 1299 |||||||| || |||||||||| |||||| ||||||||||||||||||||||| Sbjct: 1549 gagcagattgcaaacccgagcatctacgcagactgcacgcattggtgcctccc 1601 Score = 54.0 bits (27), Expect = 0.002 Identities = 78/95 (82%) Strand = Plus / Plus Query: 1088 accacggactacagcatgatggacaaggcgaagcacatcttcagaccactggagcagaaa 1147 ||||| |||||| |||||||||||||||||||| | || || || ||||||| | || Sbjct: 1390 accacagactacggcatgatggacaaggcgaaggagatatttggaacactggaaccaaag 1449 Query: 1148 ggcataagcgttcagatactcaacttcacccagct 1182 |||||| ||||||||||| ||| |||||||||| Sbjct: 1450 ggcatacatgttcagatactgaacatcacccagct 1484
>ref|NM_001072075.1| Oryza sativa (japonica cultivar-group) Os11g0107000 (Os11g0107000) mRNA, complete cds Length = 1787 Score = 398 bits (201), Expect = e-107 Identities = 620/759 (81%), Gaps = 3/759 (0%) Strand = Plus / Plus Query: 295 ggaggagtgcaactggtccttgggacggtgggtgtacgacaacgcctcccagccgctcta 354 |||||||||||||||||| |||||||||||||||||||||||| | || | ||| || || Sbjct: 530 ggaggagtgcaactggtcgttgggacggtgggtgtacgacaactcgtcgcggccacttta 589 Query: 355 ctccggcctcaactgctccttcatcttcgacgaggtcgcctgcgagaagtacggccggaa 414 ||||||| | || |||||||| |||||||||||||| |||||||| ||||| || |||| Sbjct: 590 ctccggcttgaagtgctcctttatcttcgacgaggtagcctgcgacaagtatggaaggaa 649 Query: 415 tgataccaggtaccagcattggagatggcagcccgatggatgtgatcttccaaggttcaa 474 ||| |||| ||||||||| |||||||||||||| | || || | |||||||| ||||| Sbjct: 650 tgacaccaagtaccagcactggagatggcagcctcacggttgcaaccttccaagattcaa 709 Query: 475 cgccaccaaactgctcgaaaagctgaggaacaagaggatggtcttcgtgggcgactcaat 534 ||||| || | || |||||||| ||||||||||| | || || |||||||| ||| | Sbjct: 710 tgccacaaagtttcttgaaaagcttaggaacaagagactagtttttgtgggcgattcagt 769 Query: 535 caacaggaaccaatgggtctccatggtttgcatggtggaggcctccatccctgaaggaca 594 ||||| || |||||||| || ||||| |||||||||||| || ||||||||| || | Sbjct: 770 aaacagaaatcaatgggtgtcgatggtgtgcatggtggagcacttcatccctgatggccg 829 Query: 595 aaagatgcgcgtttacaatggctcgcttatctccttcacggcattcgaatacaatgcgac 654 ||||||||||||||||| ||||| ||||||||||||| ||||| || ||||||||||| Sbjct: 830 caagatgcgcgtttacaacggctcccttatctccttcaaagcatttgagtacaatgcgac 889 Query: 655 aatcgacttctactggtcgccgctgatactagaatccaacagcgacaacccgataattca 714 || || ||||||||||| || ||| || | ||||| |||||||||||||| |||||||| Sbjct: 890 gatagatttctactggtcaccactgctattggaatcaaacagcgacaaccccataattca 949 Query: 715 ccgggttgagtaccggatcatacgggcggagaagattgagaagcatgcccgtgcctgggg 774 | | || ||||| ||||||||| |||| || | ||||||||| || ||| || |||| Sbjct: 950 cagagtggagtatcggatcataagggcagacaggattgagaaacacgccaatgtctggaa 1009 Query: 775 caatgctgacgttattgttttcaactcttacctttggtggaggaagcagaagcccgatat 834 | ||||| | || || |||||||| |||||||||||||||||||||| | | ||| Sbjct: 1010 ggacgctgatttcatcgtcttcaactcctacctttggtggaggaagcagagggatggtat 1069 Query: 835 gaagatgaaggtcatgtacggctcatttgaggatggtgatgcaaagctagacgaagtgga 894 || |||||| |||||||| || |||||||||||||| ||||||||| |||| || ||||| Sbjct: 1070 gacgatgaaagtcatgtatggttcatttgaggatggggatgcaaagttagatgaggtgga 1129 Query: 895 gatggtggaaggtttcgagattgctctcaagaaactaaccgagtgggtgggagcgaatgt 954 ||||| || |||| ||||| ||||||||||||||||| || | | ||||| ||| | Sbjct: 1130 aatggttgatggttatgagatagctctcaagaaactaactgaatatcttggagccaatat 1189 Query: 955 caac---aacaagactaaaatctatttcgcaggctcgtcgcctacccatacctgggcaag 1011 |||| |||||||||| ||||| || |||||||| || ||| ||||| ||||||| || Sbjct: 1190 caacaagaacaagactagaatcttctttgcaggctcatcacctgcccattcctgggctag 1249 Query: 1012 cgactggggtggagacgacagcaacaagtgcctgaacga 1050 | ||||||| ||||| |||| ||||||||| || ||||| Sbjct: 1250 caactggggaggagatgacaacaacaagtgtctaaacga 1288 Score = 103 bits (52), Expect = 2e-18 Identities = 58/60 (96%) Strand = Plus / Plus Query: 109 ctccctcgtcgccttcttcatcgtcgtcagctccgtctccctgctcttcgaccgcggcca 168 |||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||| Sbjct: 266 ctccctcgtcgccttcttcatcgtcgtcagctccgtctccctcctcttcgaccgcagcca 325 Score = 73.8 bits (37), Expect = 2e-09 Identities = 49/53 (92%) Strand = Plus / Plus Query: 1247 gagcagatcgccaacccgagcagctacgccgactgcacgcattggtgcctccc 1299 |||||||| || |||||||||| |||||| ||||||||||||||||||||||| Sbjct: 1485 gagcagattgcaaacccgagcatctacgcagactgcacgcattggtgcctccc 1537 Score = 54.0 bits (27), Expect = 0.002 Identities = 78/95 (82%) Strand = Plus / Plus Query: 1088 accacggactacagcatgatggacaaggcgaagcacatcttcagaccactggagcagaaa 1147 ||||| |||||| |||||||||||||||||||| | ||||| || || |||| | || Sbjct: 1326 accacagactacggcatgatggacaaggcgaaggagatctttggaacattggaaccaaag 1385 Query: 1148 ggcataagcgttcagatactcaacttcacccagct 1182 |||||| ||||||||||| ||| |||||||||| Sbjct: 1386 ggcatacatgttcagatactgaacatcacccagct 1420
>dbj|AK065582.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013032I12, full insert sequence Length = 1789 Score = 398 bits (201), Expect = e-107 Identities = 620/759 (81%), Gaps = 3/759 (0%) Strand = Plus / Plus Query: 295 ggaggagtgcaactggtccttgggacggtgggtgtacgacaacgcctcccagccgctcta 354 |||||||||||||||||| |||||||||||||||||||||||| | || | ||| || || Sbjct: 531 ggaggagtgcaactggtcgttgggacggtgggtgtacgacaactcgtcgcggccacttta 590 Query: 355 ctccggcctcaactgctccttcatcttcgacgaggtcgcctgcgagaagtacggccggaa 414 ||||||| | || |||||||| |||||||||||||| |||||||| ||||| || |||| Sbjct: 591 ctccggcttgaagtgctcctttatcttcgacgaggtagcctgcgacaagtatggaaggaa 650 Query: 415 tgataccaggtaccagcattggagatggcagcccgatggatgtgatcttccaaggttcaa 474 ||| |||| ||||||||| |||||||||||||| | || || | |||||||| ||||| Sbjct: 651 tgacaccaagtaccagcactggagatggcagcctcacggttgcaaccttccaagattcaa 710 Query: 475 cgccaccaaactgctcgaaaagctgaggaacaagaggatggtcttcgtgggcgactcaat 534 ||||| || | || |||||||| ||||||||||| | || || |||||||| ||| | Sbjct: 711 tgccacaaagtttcttgaaaagcttaggaacaagagactagtttttgtgggcgattcagt 770 Query: 535 caacaggaaccaatgggtctccatggtttgcatggtggaggcctccatccctgaaggaca 594 ||||| || |||||||| || ||||| |||||||||||| || ||||||||| || | Sbjct: 771 aaacagaaatcaatgggtgtcgatggtgtgcatggtggagcacttcatccctgatggccg 830 Query: 595 aaagatgcgcgtttacaatggctcgcttatctccttcacggcattcgaatacaatgcgac 654 ||||||||||||||||| ||||| ||||||||||||| ||||| || ||||||||||| Sbjct: 831 caagatgcgcgtttacaacggctcccttatctccttcaaagcatttgagtacaatgcgac 890 Query: 655 aatcgacttctactggtcgccgctgatactagaatccaacagcgacaacccgataattca 714 || || ||||||||||| || ||| || | ||||| |||||||||||||| |||||||| Sbjct: 891 gatagatttctactggtcaccactgctattggaatcaaacagcgacaaccccataattca 950 Query: 715 ccgggttgagtaccggatcatacgggcggagaagattgagaagcatgcccgtgcctgggg 774 | | || ||||| ||||||||| |||| || | ||||||||| || ||| || |||| Sbjct: 951 cagagtggagtatcggatcataagggcagacaggattgagaaacacgccaatgtctggaa 1010 Query: 775 caatgctgacgttattgttttcaactcttacctttggtggaggaagcagaagcccgatat 834 | ||||| | || || |||||||| |||||||||||||||||||||| | | ||| Sbjct: 1011 ggacgctgatttcatcgtcttcaactcctacctttggtggaggaagcagagggatggtat 1070 Query: 835 gaagatgaaggtcatgtacggctcatttgaggatggtgatgcaaagctagacgaagtgga 894 || |||||| |||||||| || |||||||||||||| ||||||||| |||| || ||||| Sbjct: 1071 gacgatgaaagtcatgtatggttcatttgaggatggggatgcaaagttagatgaggtgga 1130 Query: 895 gatggtggaaggtttcgagattgctctcaagaaactaaccgagtgggtgggagcgaatgt 954 ||||| || |||| ||||| ||||||||||||||||| || | | ||||| ||| | Sbjct: 1131 aatggttgatggttatgagatagctctcaagaaactaactgaatatcttggagccaatat 1190 Query: 955 caac---aacaagactaaaatctatttcgcaggctcgtcgcctacccatacctgggcaag 1011 |||| |||||||||| ||||| || |||||||| || ||| ||||| ||||||| || Sbjct: 1191 caacaagaacaagactagaatcttctttgcaggctcatcacctgcccattcctgggctag 1250 Query: 1012 cgactggggtggagacgacagcaacaagtgcctgaacga 1050 | ||||||| ||||| |||| ||||||||| || ||||| Sbjct: 1251 caactggggaggagatgacaacaacaagtgtctaaacga 1289 Score = 103 bits (52), Expect = 2e-18 Identities = 58/60 (96%) Strand = Plus / Plus Query: 109 ctccctcgtcgccttcttcatcgtcgtcagctccgtctccctgctcttcgaccgcggcca 168 |||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||| Sbjct: 267 ctccctcgtcgccttcttcatcgtcgtcagctccgtctccctcctcttcgaccgcagcca 326 Score = 73.8 bits (37), Expect = 2e-09 Identities = 49/53 (92%) Strand = Plus / Plus Query: 1247 gagcagatcgccaacccgagcagctacgccgactgcacgcattggtgcctccc 1299 |||||||| || |||||||||| |||||| ||||||||||||||||||||||| Sbjct: 1486 gagcagattgcaaacccgagcatctacgcagactgcacgcattggtgcctccc 1538 Score = 54.0 bits (27), Expect = 0.002 Identities = 78/95 (82%) Strand = Plus / Plus Query: 1088 accacggactacagcatgatggacaaggcgaagcacatcttcagaccactggagcagaaa 1147 ||||| |||||| |||||||||||||||||||| | ||||| || || |||| | || Sbjct: 1327 accacagactacggcatgatggacaaggcgaaggagatctttggaacattggaaccaaag 1386 Query: 1148 ggcataagcgttcagatactcaacttcacccagct 1182 |||||| ||||||||||| ||| |||||||||| Sbjct: 1387 ggcatacatgttcagatactgaacatcacccagct 1421
>gb|AY596531.1| Saccharum officinarum clone SCVPRZ2041G02, complete sequence Length = 1641 Score = 392 bits (198), Expect = e-105 Identities = 607/742 (81%), Gaps = 6/742 (0%) Strand = Plus / Minus Query: 296 gaggagtgcaactggtccttgggacggtgggtgtacgacaacgcctcccagccgctctac 355 ||||||||||||||||| ||| ||||||||||||||||||| || | ||| | ||| Sbjct: 1314 gaggagtgcaactggtcaagggggcggtgggtgtacgacaacgtgtctcggccattgtac 1255 Query: 356 tccggcctcaactgctccttcatcttcgacgaggtcgcctgcgagaagtacggccggaat 415 ||| ||||| || ||||||||||| |||||| ||||| || || || ||| |||| Sbjct: 1254 aacgggctcaagtgtgccttcatcttccccgaggtggcctgtgacaaatatggcaggaag 1195 Query: 416 gataccaggtaccagcattggagatggcagcccgatggatgtgatcttccaaggttcaac 475 ||| || ||||||||| |||||||||||||| ||||||| || || ||||| ||| | Sbjct: 1194 gatgtcatgtaccagcactggagatggcagcctcatggatgcgacctcccaagattcgat 1135 Query: 476 gccaccaaactgctcgaaaagctgaggaacaagaggatggtcttcgtgggcgactcaatc 535 |||| ||| ||||| |||||||||||||||||||| |||| || ||||| |||||| || Sbjct: 1134 gccatcaagctgcttgaaaagctgaggaacaagagattggtgtttgtgggtgactcagtc 1075 Query: 536 aacaggaaccaatgggtctccatggtttgcatggtggaggcctccatccctgaag---ga 592 || ||||||||||||||||| | || ||||||||||||||||| || ||||| | | Sbjct: 1074 aataggaaccaatgggtctctctcgtgtgcatggtggaggcctcaatacctgatgacagg 1015 Query: 593 caaaagatgcgcgtttacaatggctcgcttatctccttcacggcattcgaatacaatgcg 652 | ||||| ||| | | ||||||||| || |||||||||| |||||| ||||||||||| Sbjct: 1014 ctcaagatacgcatcttcaatggctcactcatctccttcaaggcattggaatacaatgca 955 Query: 653 acaatcgacttctactggtcgccgctgatactagaatccaacagcgacaacccgataatt 712 ||||| || ||||||||||| || || | | || || |||||||||||||| || ||| Sbjct: 954 acaatagatttctactggtcaccactactggttgagtctaacagcgacaaccccattatt 895 Query: 713 caccgggttgagtaccggatcatacgggcggagaagattgagaagcatgcccgtgcctgg 772 |||||||| ||||||||||||||| |||| || | ||||||||||||||| ||| |||| Sbjct: 894 caccgggtggagtaccggatcataagggcagacagaattgagaagcatgccagtgtctgg 835 Query: 773 ggcaatgctgacgttattgttttcaactcttacctttggtggaggaagcagaagcccgat 832 | |||||||| | ||||| ||||| |||||||| |||||||||||||||||| || Sbjct: 834 agggatgctgacatcattgtcttcaattcttacctgtggtggaggaagcagaaggatgac 775 Query: 833 atgaagatgaaggtcatgtacggctcatttgaggatggtgatgcaaagctagacgaagtg 892 |||| ||||||||||||||| ||||||||||| ||||||||||||||| |||||||| || Sbjct: 774 atgaggatgaaggtcatgtatggctcatttgaagatggtgatgcaaagttagacgaaatg 715 Query: 893 gagatggtggaaggtttcgagattgctctcaagaaactaaccgagtgggtgggagcgaa- 951 || ||||| || ||||||||||| |||||||||||||||||||| ||| | |||| ||| Sbjct: 714 gaaatggtcgatggtttcgagatagctctcaagaaactaaccgaatggcttggagagaat 655 Query: 952 --tgtcaacaacaagactaaaatctatttcgcaggctcgtcgcctacccatacctgggca 1009 || ||| |||||||||| |||| ||| ||||| || || || || ||| ||||||| Sbjct: 654 attgacaagaacaagactaggatcttttttgcaggatcatcaccaacacattcctgggct 595 Query: 1010 agcgactggggtggagacgaca 1031 ||| ||||||| ||||| |||| Sbjct: 594 agcaactggggaggagaagaca 573 Score = 50.1 bits (25), Expect = 0.024 Identities = 31/33 (93%) Strand = Plus / Minus Query: 1267 cagctacgccgactgcacgcattggtgcctccc 1299 ||||||||| || |||||||||||||||||||| Sbjct: 337 cagctacgcggattgcacgcattggtgcctccc 305
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12 Length = 27566993 Score = 168 bits (85), Expect = 4e-38 Identities = 136/153 (88%) Strand = Plus / Plus Query: 295 ggaggagtgcaactggtccttgggacggtgggtgtacgacaacgcctcccagccgctcta 354 |||||| ||||||||||| |||||||||||||||||||||||||| || | ||| ||||| Sbjct: 337439 ggaggactgcaactggtcgttgggacggtgggtgtacgacaacgcgtcgcggccactcta 337498 Query: 355 ctccggcctcaactgctccttcatcttcgacgaggtcgcctgcgagaagtacggccggaa 414 ||||||| | || ||||||||||||||||||||||| |||||||| ||||| || |||| Sbjct: 337499 ctccggcttgaagtgctccttcatcttcgacgaggtggcctgcgacaagtatggaaggaa 337558 Query: 415 tgataccaggtaccagcattggagatggcagcc 447 ||| |||| ||||||||| |||||||||||||| Sbjct: 337559 tgacaccaagtaccagcactggagatggcagcc 337591 Score = 111 bits (56), Expect = 8e-21 Identities = 59/60 (98%) Strand = Plus / Plus Query: 109 ctccctcgtcgccttcttcatcgtcgtcagctccgtctccctgctcttcgaccgcggcca 168 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 337175 ctccctcgtcgccttcttcatcgtcgtcagctccgtctccctcctcttcgaccgcggcca 337234 Score = 107 bits (54), Expect = 1e-19 Identities = 120/142 (84%) Strand = Plus / Plus Query: 491 gaaaagctgaggaacaagaggatggtcttcgtgggcgactcaatcaacaggaaccaatgg 550 |||||||| ||||||||||| |||| || |||||||| ||| | ||||| || |||||| Sbjct: 338749 gaaaagcttaggaacaagagactggtttttgtgggcgattcagtaaacagaaatcaatgg 338808 Query: 551 gtctccatggtttgcatggtggaggcctccatccctgaaggacaaaagatgcgcgtttac 610 || || ||||| |||||||||||| || ||||||||| || | ||||||||||||||| Sbjct: 338809 gtgtcgatggtgtgcatggtggagcacttcatccctgatggccgcaagatgcgcgtttac 338868 Query: 611 aatggctcgcttatctccttca 632 || ||||| ||||||||||||| Sbjct: 338869 aacggctcccttatctccttca 338890 Score = 97.6 bits (49), Expect = 1e-16 Identities = 148/181 (81%) Strand = Plus / Plus Query: 644 tacaatgcgacaatcgacttctactggtcgccgctgatactagaatccaacagcgacaac 703 ||||||||||| || || ||||||||||| || ||| || | ||||| |||||||||||| Sbjct: 338999 tacaatgcgacgatagatttctactggtcaccactgctattggaatcaaacagcgacaac 339058 Query: 704 ccgataattcaccgggttgagtaccggatcatacgggcggagaagattgagaagcatgcc 763 || ||||||||| | || ||||||||||||||| |||| || | ||||||||| || ||| Sbjct: 339059 cccataattcacagagtggagtaccggatcataagggcagacaggattgagaaacacgcc 339118 Query: 764 cgtgcctggggcaatgctgacgttattgttttcaactcttacctttggtggaggaagcag 823 || |||| | ||||| | || || |||||||| ||||||||||||||||||||| Sbjct: 339119 aatgtctggaaggacgctgatttcatcgtcttcaactcctacctttggtggaggaagcag 339178 Query: 824 a 824 | Sbjct: 339179 a 339179 Score = 73.8 bits (37), Expect = 2e-09 Identities = 49/53 (92%) Strand = Plus / Plus Query: 1247 gagcagatcgccaacccgagcagctacgccgactgcacgcattggtgcctccc 1299 |||||||| || |||||||||| |||||| ||||||||||||||||||||||| Sbjct: 340155 gagcagattgcaaacccgagcatctacgcagactgcacgcattggtgcctccc 340207 Score = 58.0 bits (29), Expect = 1e-04 Identities = 65/77 (84%) Strand = Plus / Plus Query: 857 tcatttgaggatggtgatgcaaagctagacgaagtggagatggtggaaggtttcgagatt 916 ||||||||||| || ||||||||| |||| || ||| | ||||| || |||| ||||| Sbjct: 339421 tcatttgaggacggggatgcaaagttagatgaggtgcaaatggttgatggttatgagata 339480 Query: 917 gctctcaagaaactaac 933 ||||||||||||||||| Sbjct: 339481 gctctcaagaaactaac 339497 Score = 54.0 bits (27), Expect = 0.002 Identities = 78/95 (82%) Strand = Plus / Plus Query: 1088 accacggactacagcatgatggacaaggcgaagcacatcttcagaccactggagcagaaa 1147 ||||| |||||| |||||||||||||||||||| | || || || ||||||| | || Sbjct: 339996 accacagactacggcatgatggacaaggcgaaggagatatttggaacactggaaccaaag 340055 Query: 1148 ggcataagcgttcagatactcaacttcacccagct 1182 |||||| ||||||||||| ||| |||||||||| Sbjct: 340056 ggcatacatgttcagatactgaacatcacccagct 340090
>emb|BX000494.2|CNS08CDK Oryza sativa chromosome 12, . BAC OSJNBa0052H10 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 152222 Score = 168 bits (85), Expect = 4e-38 Identities = 136/153 (88%) Strand = Plus / Plus Query: 295 ggaggagtgcaactggtccttgggacggtgggtgtacgacaacgcctcccagccgctcta 354 |||||| ||||||||||| |||||||||||||||||||||||||| || | ||| ||||| Sbjct: 70490 ggaggactgcaactggtcgttgggacggtgggtgtacgacaacgcgtcgcggccactcta 70549 Query: 355 ctccggcctcaactgctccttcatcttcgacgaggtcgcctgcgagaagtacggccggaa 414 ||||||| | || ||||||||||||||||||||||| |||||||| ||||| || |||| Sbjct: 70550 ctccggcttgaagtgctccttcatcttcgacgaggtggcctgcgacaagtatggaaggaa 70609 Query: 415 tgataccaggtaccagcattggagatggcagcc 447 ||| |||| ||||||||| |||||||||||||| Sbjct: 70610 tgacaccaagtaccagcactggagatggcagcc 70642 Score = 111 bits (56), Expect = 8e-21 Identities = 59/60 (98%) Strand = Plus / Plus Query: 109 ctccctcgtcgccttcttcatcgtcgtcagctccgtctccctgctcttcgaccgcggcca 168 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 70226 ctccctcgtcgccttcttcatcgtcgtcagctccgtctccctcctcttcgaccgcggcca 70285 Score = 107 bits (54), Expect = 1e-19 Identities = 120/142 (84%) Strand = Plus / Plus Query: 491 gaaaagctgaggaacaagaggatggtcttcgtgggcgactcaatcaacaggaaccaatgg 550 |||||||| ||||||||||| |||| || |||||||| ||| | ||||| || |||||| Sbjct: 71800 gaaaagcttaggaacaagagactggtttttgtgggcgattcagtaaacagaaatcaatgg 71859 Query: 551 gtctccatggtttgcatggtggaggcctccatccctgaaggacaaaagatgcgcgtttac 610 || || ||||| |||||||||||| || ||||||||| || | ||||||||||||||| Sbjct: 71860 gtgtcgatggtgtgcatggtggagcacttcatccctgatggccgcaagatgcgcgtttac 71919 Query: 611 aatggctcgcttatctccttca 632 || ||||| ||||||||||||| Sbjct: 71920 aacggctcccttatctccttca 71941 Score = 97.6 bits (49), Expect = 1e-16 Identities = 148/181 (81%) Strand = Plus / Plus Query: 644 tacaatgcgacaatcgacttctactggtcgccgctgatactagaatccaacagcgacaac 703 ||||||||||| || || ||||||||||| || ||| || | ||||| |||||||||||| Sbjct: 72050 tacaatgcgacgatagatttctactggtcaccactgctattggaatcaaacagcgacaac 72109 Query: 704 ccgataattcaccgggttgagtaccggatcatacgggcggagaagattgagaagcatgcc 763 || ||||||||| | || ||||||||||||||| |||| || | ||||||||| || ||| Sbjct: 72110 cccataattcacagagtggagtaccggatcataagggcagacaggattgagaaacacgcc 72169 Query: 764 cgtgcctggggcaatgctgacgttattgttttcaactcttacctttggtggaggaagcag 823 || |||| | ||||| | || || |||||||| ||||||||||||||||||||| Sbjct: 72170 aatgtctggaaggacgctgatttcatcgtcttcaactcctacctttggtggaggaagcag 72229 Query: 824 a 824 | Sbjct: 72230 a 72230 Score = 73.8 bits (37), Expect = 2e-09 Identities = 49/53 (92%) Strand = Plus / Plus Query: 1247 gagcagatcgccaacccgagcagctacgccgactgcacgcattggtgcctccc 1299 |||||||| || |||||||||| |||||| ||||||||||||||||||||||| Sbjct: 73206 gagcagattgcaaacccgagcatctacgcagactgcacgcattggtgcctccc 73258 Score = 58.0 bits (29), Expect = 1e-04 Identities = 65/77 (84%) Strand = Plus / Plus Query: 857 tcatttgaggatggtgatgcaaagctagacgaagtggagatggtggaaggtttcgagatt 916 ||||||||||| || ||||||||| |||| || ||| | ||||| || |||| ||||| Sbjct: 72472 tcatttgaggacggggatgcaaagttagatgaggtgcaaatggttgatggttatgagata 72531 Query: 917 gctctcaagaaactaac 933 ||||||||||||||||| Sbjct: 72532 gctctcaagaaactaac 72548 Score = 54.0 bits (27), Expect = 0.002 Identities = 78/95 (82%) Strand = Plus / Plus Query: 1088 accacggactacagcatgatggacaaggcgaagcacatcttcagaccactggagcagaaa 1147 ||||| |||||| |||||||||||||||||||| | || || || ||||||| | || Sbjct: 73047 accacagactacggcatgatggacaaggcgaaggagatatttggaacactggaaccaaag 73106 Query: 1148 ggcataagcgttcagatactcaacttcacccagct 1182 |||||| ||||||||||| ||| |||||||||| Sbjct: 73107 ggcatacatgttcagatactgaacatcacccagct 73141
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11 Length = 28386948 Score = 153 bits (77), Expect = 2e-33 Identities = 134/153 (87%) Strand = Plus / Plus Query: 295 ggaggagtgcaactggtccttgggacggtgggtgtacgacaacgcctcccagccgctcta 354 |||||||||||||||||| |||||||||||||||||||||||| | || | ||| || || Sbjct: 328580 ggaggagtgcaactggtcgttgggacggtgggtgtacgacaactcgtcgcggccacttta 328639 Query: 355 ctccggcctcaactgctccttcatcttcgacgaggtcgcctgcgagaagtacggccggaa 414 ||||||| | || |||||||| |||||||||||||| |||||||| ||||| || |||| Sbjct: 328640 ctccggcttgaagtgctcctttatcttcgacgaggtagcctgcgacaagtatggaaggaa 328699 Query: 415 tgataccaggtaccagcattggagatggcagcc 447 ||| |||| ||||||||| |||||||||||||| Sbjct: 328700 tgacaccaagtaccagcactggagatggcagcc 328732 Score = 103 bits (52), Expect = 2e-18 Identities = 58/60 (96%) Strand = Plus / Plus Query: 109 ctccctcgtcgccttcttcatcgtcgtcagctccgtctccctgctcttcgaccgcggcca 168 |||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||| Sbjct: 328316 ctccctcgtcgccttcttcatcgtcgtcagctccgtctccctcctcttcgaccgcagcca 328375 Score = 99.6 bits (50), Expect = 3e-17 Identities = 119/142 (83%) Strand = Plus / Plus Query: 491 gaaaagctgaggaacaagaggatggtcttcgtgggcgactcaatcaacaggaaccaatgg 550 |||||||| ||||||||||| | || || |||||||| ||| | ||||| || |||||| Sbjct: 330104 gaaaagcttaggaacaagagactagtttttgtgggcgattcagtaaacagaaatcaatgg 330163 Query: 551 gtctccatggtttgcatggtggaggcctccatccctgaaggacaaaagatgcgcgtttac 610 || || ||||| |||||||||||| || ||||||||| || | ||||||||||||||| Sbjct: 330164 gtgtcgatggtgtgcatggtggagcacttcatccctgatggccgcaagatgcgcgtttac 330223 Query: 611 aatggctcgcttatctccttca 632 || ||||| ||||||||||||| Sbjct: 330224 aacggctcccttatctccttca 330245 Score = 89.7 bits (45), Expect = 3e-14 Identities = 147/181 (81%) Strand = Plus / Plus Query: 644 tacaatgcgacaatcgacttctactggtcgccgctgatactagaatccaacagcgacaac 703 ||||||||||| || || ||||||||||| || ||| || | ||||| |||||||||||| Sbjct: 330360 tacaatgcgacgatagatttctactggtcaccactgctattggaatcaaacagcgacaac 330419 Query: 704 ccgataattcaccgggttgagtaccggatcatacgggcggagaagattgagaagcatgcc 763 || ||||||||| | || ||||| ||||||||| |||| || | ||||||||| || ||| Sbjct: 330420 cccataattcacagagtggagtatcggatcataagggcagacaggattgagaaacacgcc 330479 Query: 764 cgtgcctggggcaatgctgacgttattgttttcaactcttacctttggtggaggaagcag 823 || |||| | ||||| | || || |||||||| ||||||||||||||||||||| Sbjct: 330480 aatgtctggaaggacgctgatttcatcgtcttcaactcctacctttggtggaggaagcag 330539 Query: 824 a 824 | Sbjct: 330540 a 330540 Score = 73.8 bits (37), Expect = 2e-09 Identities = 67/77 (87%) Strand = Plus / Plus Query: 857 tcatttgaggatggtgatgcaaagctagacgaagtggagatggtggaaggtttcgagatt 916 |||||||||||||| ||||||||| |||| || ||||| ||||| || |||| ||||| Sbjct: 330786 tcatttgaggatggggatgcaaagttagatgaggtggaaatggttgatggttatgagata 330845 Query: 917 gctctcaagaaactaac 933 ||||||||||||||||| Sbjct: 330846 gctctcaagaaactaac 330862 Score = 73.8 bits (37), Expect = 2e-09 Identities = 49/53 (92%) Strand = Plus / Plus Query: 1247 gagcagatcgccaacccgagcagctacgccgactgcacgcattggtgcctccc 1299 |||||||| || |||||||||| |||||| ||||||||||||||||||||||| Sbjct: 331520 gagcagattgcaaacccgagcatctacgcagactgcacgcattggtgcctccc 331572 Score = 54.0 bits (27), Expect = 0.002 Identities = 78/95 (82%) Strand = Plus / Plus Query: 1088 accacggactacagcatgatggacaaggcgaagcacatcttcagaccactggagcagaaa 1147 ||||| |||||| |||||||||||||||||||| | ||||| || || |||| | || Sbjct: 331361 accacagactacggcatgatggacaaggcgaaggagatctttggaacattggaaccaaag 331420 Query: 1148 ggcataagcgttcagatactcaacttcacccagct 1182 |||||| ||||||||||| ||| |||||||||| Sbjct: 331421 ggcatacatgttcagatactgaacatcacccagct 331455
>emb|BX000497.1|CNS08CDN Oryza sativa chromosome 11, . BAC OSJNBa0010K05 of library OSJNBa from chromosome 11 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 164143 Score = 153 bits (77), Expect = 2e-33 Identities = 134/153 (87%) Strand = Plus / Plus Query: 295 ggaggagtgcaactggtccttgggacggtgggtgtacgacaacgcctcccagccgctcta 354 |||||||||||||||||| |||||||||||||||||||||||| | || | ||| || || Sbjct: 35898 ggaggagtgcaactggtcgttgggacggtgggtgtacgacaactcgtcgcggccacttta 35957 Query: 355 ctccggcctcaactgctccttcatcttcgacgaggtcgcctgcgagaagtacggccggaa 414 ||||||| | || |||||||| |||||||||||||| |||||||| ||||| || |||| Sbjct: 35958 ctccggcttgaagtgctcctttatcttcgacgaggtagcctgcgacaagtatggaaggaa 36017 Query: 415 tgataccaggtaccagcattggagatggcagcc 447 ||| |||| ||||||||| |||||||||||||| Sbjct: 36018 tgacaccaagtaccagcactggagatggcagcc 36050 Score = 103 bits (52), Expect = 2e-18 Identities = 58/60 (96%) Strand = Plus / Plus Query: 109 ctccctcgtcgccttcttcatcgtcgtcagctccgtctccctgctcttcgaccgcggcca 168 |||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||| Sbjct: 35634 ctccctcgtcgccttcttcatcgtcgtcagctccgtctccctcctcttcgaccgcagcca 35693 Score = 99.6 bits (50), Expect = 3e-17 Identities = 119/142 (83%) Strand = Plus / Plus Query: 491 gaaaagctgaggaacaagaggatggtcttcgtgggcgactcaatcaacaggaaccaatgg 550 |||||||| ||||||||||| | || || |||||||| ||| | ||||| || |||||| Sbjct: 37422 gaaaagcttaggaacaagagactagtttttgtgggcgattcagtaaacagaaatcaatgg 37481 Query: 551 gtctccatggtttgcatggtggaggcctccatccctgaaggacaaaagatgcgcgtttac 610 || || ||||| |||||||||||| || ||||||||| || | ||||||||||||||| Sbjct: 37482 gtgtcgatggtgtgcatggtggagcacttcatccctgatggccgcaagatgcgcgtttac 37541 Query: 611 aatggctcgcttatctccttca 632 || ||||| ||||||||||||| Sbjct: 37542 aacggctcccttatctccttca 37563 Score = 89.7 bits (45), Expect = 3e-14 Identities = 147/181 (81%) Strand = Plus / Plus Query: 644 tacaatgcgacaatcgacttctactggtcgccgctgatactagaatccaacagcgacaac 703 ||||||||||| || || ||||||||||| || ||| || | ||||| |||||||||||| Sbjct: 37678 tacaatgcgacgatagatttctactggtcaccactgctattggaatcaaacagcgacaac 37737 Query: 704 ccgataattcaccgggttgagtaccggatcatacgggcggagaagattgagaagcatgcc 763 || ||||||||| | || ||||| ||||||||| |||| || | ||||||||| || ||| Sbjct: 37738 cccataattcacagagtggagtatcggatcataagggcagacaggattgagaaacacgcc 37797 Query: 764 cgtgcctggggcaatgctgacgttattgttttcaactcttacctttggtggaggaagcag 823 || |||| | ||||| | || || |||||||| ||||||||||||||||||||| Sbjct: 37798 aatgtctggaaggacgctgatttcatcgtcttcaactcctacctttggtggaggaagcag 37857 Query: 824 a 824 | Sbjct: 37858 a 37858 Score = 73.8 bits (37), Expect = 2e-09 Identities = 67/77 (87%) Strand = Plus / Plus Query: 857 tcatttgaggatggtgatgcaaagctagacgaagtggagatggtggaaggtttcgagatt 916 |||||||||||||| ||||||||| |||| || ||||| ||||| || |||| ||||| Sbjct: 38104 tcatttgaggatggggatgcaaagttagatgaggtggaaatggttgatggttatgagata 38163 Query: 917 gctctcaagaaactaac 933 ||||||||||||||||| Sbjct: 38164 gctctcaagaaactaac 38180 Score = 73.8 bits (37), Expect = 2e-09 Identities = 49/53 (92%) Strand = Plus / Plus Query: 1247 gagcagatcgccaacccgagcagctacgccgactgcacgcattggtgcctccc 1299 |||||||| || |||||||||| |||||| ||||||||||||||||||||||| Sbjct: 38838 gagcagattgcaaacccgagcatctacgcagactgcacgcattggtgcctccc 38890 Score = 54.0 bits (27), Expect = 0.002 Identities = 78/95 (82%) Strand = Plus / Plus Query: 1088 accacggactacagcatgatggacaaggcgaagcacatcttcagaccactggagcagaaa 1147 ||||| |||||| |||||||||||||||||||| | ||||| || || |||| | || Sbjct: 38679 accacagactacggcatgatggacaaggcgaaggagatctttggaacattggaaccaaag 38738 Query: 1148 ggcataagcgttcagatactcaacttcacccagct 1182 |||||| ||||||||||| ||| |||||||||| Sbjct: 38739 ggcatacatgttcagatactgaacatcacccagct 38773
>gb|AY111273.1| Zea mays CL33564_1 mRNA sequence Length = 545 Score = 101 bits (51), Expect = 7e-18 Identities = 144/175 (82%) Strand = Plus / Minus Query: 1147 aggcataagcgttcagatactcaacttcacccagctgaccgactaccgcatcgacgcgca 1206 ||||||| | || |||||||||||| || | ||||| |||||||||||| |||| ||| Sbjct: 487 aggcatacgggtccagatactcaacatcccggagctgtccgactaccgcaaggacgggca 428 Query: 1207 ccccaccgtgttccggcggcagttcacccccctcacggcggagcagatcgccaacccgag 1266 ||||| |||||| || |||||||| ||||| || |||||||||||| ||||| Sbjct: 427 tcccacggtgttcaggaggcagttcgttcccctgaccaaggagcagatcgcggacccggc 368 Query: 1267 cagctacgccgactgcacgcattggtgcctccccggcgtcccggacgtgtggaac 1321 ||||||||| ||||||||||| ||||||||||| |||||||| ||||| |||||| Sbjct: 367 cagctacgcggactgcacgcactggtgcctcccaggcgtccccgacgtctggaac 313
>ref|NM_001058236.1| Oryza sativa (japonica cultivar-group) Os03g0817500 (Os03g0817500) mRNA, complete cds Length = 1618 Score = 87.7 bits (44), Expect = 1e-13 Identities = 68/76 (89%) Strand = Plus / Plus Query: 1258 caacccgagcagctacgccgactgcacgcattggtgcctccccggcgtcccggacgtgtg 1317 |||||| ||||||||||||||||||| || |||||||||||||||||||| ||||| || Sbjct: 1407 caaccccagcagctacgccgactgcatccactggtgcctccccggcgtccccgacgtctg 1466 Query: 1318 gaaccacttcctctac 1333 |||||| |||||||| Sbjct: 1467 gaaccagctcctctac 1482 Score = 44.1 bits (22), Expect = 1.5 Identities = 34/38 (89%) Strand = Plus / Plus Query: 494 aagctgaggaacaagaggatggtcttcgtgggcgactc 531 ||||| ||||||||| || |||| |||||||||||||| Sbjct: 592 aagctaaggaacaagcggctggtgttcgtgggcgactc 629 Score = 42.1 bits (21), Expect = 5.9 Identities = 42/49 (85%) Strand = Plus / Plus Query: 423 ggtaccagcattggagatggcagcccgatggatgtgatcttccaaggtt 471 |||||||||||||||| ||||| ||| |||| || || ||||| ||||| Sbjct: 521 ggtaccagcattggaggtggcaaccccatggctgcgaccttcctaggtt 569
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 87.7 bits (44), Expect = 1e-13 Identities = 68/76 (89%) Strand = Plus / Minus Query: 1258 caacccgagcagctacgccgactgcacgcattggtgcctccccggcgtcccggacgtgtg 1317 |||||| ||||||||||||||||||| || |||||||||||||||||||| ||||| || Sbjct: 34076656 caaccccagcagctacgccgactgcatccactggtgcctccccggcgtccccgacgtctg 34076597 Query: 1318 gaaccacttcctctac 1333 |||||| |||||||| Sbjct: 34076596 gaaccagctcctctac 34076581 Score = 85.7 bits (43), Expect = 4e-13 Identities = 61/67 (91%) Strand = Plus / Minus Query: 1255 cgccaacccgagcagctacgccgactgcacgcattggtgcctccccggcgtcccggacgt 1314 |||| ||||||| ||||||||||||||||| || |||||||||||||||||||| |||| Sbjct: 34098232 cgccgacccgaggagctacgccgactgcacccactggtgcctccccggcgtccccgacgc 34098173 Query: 1315 gtggaac 1321 ||||||| Sbjct: 34098172 gtggaac 34098166 Score = 69.9 bits (35), Expect = 3e-08 Identities = 50/55 (90%) Strand = Plus / Minus Query: 1245 cggagcagatcgccaacccgagcagctacgccgactgcacgcattggtgcctccc 1299 ||||||||||||| ||||||| |||||||| || |||||||||||||||||||| Sbjct: 34107615 cggagcagatcgcgaacccgaagagctacgcggattgcacgcattggtgcctccc 34107561 Score = 46.1 bits (23), Expect = 0.38 Identities = 53/63 (84%) Strand = Plus / Plus Query: 1271 tacgccgactgcacgcattggtgcctccccggcgtcccggacgtgtggaaccacttcctc 1330 ||||||||||||| || ||||||||||| ||| |||| ||| |||||||| |||||| Sbjct: 10122640 tacgccgactgcatccactggtgcctcccgggcctccccgacacctggaaccagttcctc 10122699 Query: 1331 tac 1333 ||| Sbjct: 10122700 tac 10122702 Score = 44.1 bits (22), Expect = 1.5 Identities = 34/38 (89%) Strand = Plus / Minus Query: 494 aagctgaggaacaagaggatggtcttcgtgggcgactc 531 ||||| ||||||||| || |||| |||||||||||||| Sbjct: 34078102 aagctaaggaacaagcggctggtgttcgtgggcgactc 34078065
>gb|AC133007.4| Oryza sativa chromosome 3 BAC OSJNBa0094J08 genomic sequence, complete sequence Length = 172337 Score = 87.7 bits (44), Expect = 1e-13 Identities = 68/76 (89%) Strand = Plus / Plus Query: 1258 caacccgagcagctacgccgactgcacgcattggtgcctccccggcgtcccggacgtgtg 1317 |||||| ||||||||||||||||||| || |||||||||||||||||||| ||||| || Sbjct: 71507 caaccccagcagctacgccgactgcatccactggtgcctccccggcgtccccgacgtctg 71566 Query: 1318 gaaccacttcctctac 1333 |||||| |||||||| Sbjct: 71567 gaaccagctcctctac 71582 Score = 85.7 bits (43), Expect = 4e-13 Identities = 61/67 (91%) Strand = Plus / Plus Query: 1255 cgccaacccgagcagctacgccgactgcacgcattggtgcctccccggcgtcccggacgt 1314 |||| ||||||| ||||||||||||||||| || |||||||||||||||||||| |||| Sbjct: 49931 cgccgacccgaggagctacgccgactgcacccactggtgcctccccggcgtccccgacgc 49990 Query: 1315 gtggaac 1321 ||||||| Sbjct: 49991 gtggaac 49997 Score = 69.9 bits (35), Expect = 3e-08 Identities = 50/55 (90%) Strand = Plus / Plus Query: 1245 cggagcagatcgccaacccgagcagctacgccgactgcacgcattggtgcctccc 1299 ||||||||||||| ||||||| |||||||| || |||||||||||||||||||| Sbjct: 40548 cggagcagatcgcgaacccgaagagctacgcggattgcacgcattggtgcctccc 40602 Score = 44.1 bits (22), Expect = 1.5 Identities = 34/38 (89%) Strand = Plus / Plus Query: 494 aagctgaggaacaagaggatggtcttcgtgggcgactc 531 ||||| ||||||||| || |||| |||||||||||||| Sbjct: 70061 aagctaaggaacaagcggctggtgttcgtgggcgactc 70098
>dbj|AK111450.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-183-B10, full insert sequence Length = 1616 Score = 87.7 bits (44), Expect = 1e-13 Identities = 68/76 (89%) Strand = Plus / Plus Query: 1258 caacccgagcagctacgccgactgcacgcattggtgcctccccggcgtcccggacgtgtg 1317 |||||| ||||||||||||||||||| || |||||||||||||||||||| ||||| || Sbjct: 1405 caaccccagcagctacgccgactgcatccactggtgcctccccggcgtccccgacgtctg 1464 Query: 1318 gaaccacttcctctac 1333 |||||| |||||||| Sbjct: 1465 gaaccagctcctctac 1480 Score = 44.1 bits (22), Expect = 1.5 Identities = 34/38 (89%) Strand = Plus / Plus Query: 494 aagctgaggaacaagaggatggtcttcgtgggcgactc 531 ||||| ||||||||| || |||| |||||||||||||| Sbjct: 590 aagctaaggaacaagcggctggtgttcgtgggcgactc 627 Score = 42.1 bits (21), Expect = 5.9 Identities = 42/49 (85%) Strand = Plus / Plus Query: 423 ggtaccagcattggagatggcagcccgatggatgtgatcttccaaggtt 471 |||||||||||||||| ||||| ||| |||| || || ||||| ||||| Sbjct: 519 ggtaccagcattggaggtggcaaccccatggctgcgaccttcctaggtt 567
>ref|NM_001058237.1| Oryza sativa (japonica cultivar-group) Os03g0817800 (Os03g0817800) mRNA, complete cds Length = 1494 Score = 85.7 bits (43), Expect = 4e-13 Identities = 61/67 (91%) Strand = Plus / Plus Query: 1255 cgccaacccgagcagctacgccgactgcacgcattggtgcctccccggcgtcccggacgt 1314 |||| ||||||| ||||||||||||||||| || |||||||||||||||||||| |||| Sbjct: 1130 cgccgacccgaggagctacgccgactgcacccactggtgcctccccggcgtccccgacgc 1189 Query: 1315 gtggaac 1321 ||||||| Sbjct: 1190 gtggaac 1196
>dbj|AK104541.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-305-A10, full insert sequence Length = 1392 Score = 85.7 bits (43), Expect = 4e-13 Identities = 61/67 (91%) Strand = Plus / Plus Query: 1255 cgccaacccgagcagctacgccgactgcacgcattggtgcctccccggcgtcccggacgt 1314 |||| ||||||| ||||||||||||||||| || |||||||||||||||||||| |||| Sbjct: 1089 cgccgacccgaggagctacgccgactgcacccactggtgcctccccggcgtccccgacgc 1148 Query: 1315 gtggaac 1321 ||||||| Sbjct: 1149 gtggaac 1155
>dbj|AK065071.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001K07, full insert sequence Length = 3436 Score = 85.7 bits (43), Expect = 4e-13 Identities = 61/67 (91%) Strand = Plus / Plus Query: 1255 cgccaacccgagcagctacgccgactgcacgcattggtgcctccccggcgtcccggacgt 1314 |||| ||||||| ||||||||||||||||| || |||||||||||||||||||| |||| Sbjct: 3072 cgccgacccgaggagctacgccgactgcacccactggtgcctccccggcgtccccgacgc 3131 Query: 1315 gtggaac 1321 ||||||| Sbjct: 3132 gtggaac 3138
>dbj|AK061407.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-306-A07, full insert sequence Length = 1437 Score = 85.7 bits (43), Expect = 4e-13 Identities = 61/67 (91%) Strand = Plus / Plus Query: 1255 cgccaacccgagcagctacgccgactgcacgcattggtgcctccccggcgtcccggacgt 1314 |||| ||||||| ||||||||||||||||| || |||||||||||||||||||| |||| Sbjct: 1134 cgccgacccgaggagctacgccgactgcacccactggtgcctccccggcgtccccgacgc 1193 Query: 1315 gtggaac 1321 ||||||| Sbjct: 1194 gtggaac 1200
>gb|AY108866.1| Zea mays PCO116267 mRNA sequence Length = 858 Score = 81.8 bits (41), Expect = 7e-12 Identities = 71/81 (87%) Strand = Plus / Plus Query: 1241 acggcggagcagatcgccaacccgagcagctacgccgactgcacgcattggtgcctcccc 1300 ||||| |||||| |||| |||| || |||||||||||||||||||| |||||||||||| Sbjct: 428 acggccgagcagcgcgccgaccccaggagctacgccgactgcacgcactggtgcctcccc 487 Query: 1301 ggcgtcccggacgtgtggaac 1321 ||||| |||||| ||||||| Sbjct: 488 ggcgtgccggacacgtggaac 508
>ref|NM_001058238.1| Oryza sativa (japonica cultivar-group) Os03g0817900 (Os03g0817900) mRNA, complete cds Length = 2027 Score = 69.9 bits (35), Expect = 3e-08 Identities = 50/55 (90%) Strand = Plus / Plus Query: 1245 cggagcagatcgccaacccgagcagctacgccgactgcacgcattggtgcctccc 1299 ||||||||||||| ||||||| |||||||| || |||||||||||||||||||| Sbjct: 1516 cggagcagatcgcgaacccgaagagctacgcggattgcacgcattggtgcctccc 1570
>dbj|AK071479.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023093O16, full insert sequence Length = 2028 Score = 69.9 bits (35), Expect = 3e-08 Identities = 50/55 (90%) Strand = Plus / Plus Query: 1245 cggagcagatcgccaacccgagcagctacgccgactgcacgcattggtgcctccc 1299 ||||||||||||| ||||||| |||||||| || |||||||||||||||||||| Sbjct: 1517 cggagcagatcgcgaacccgaagagctacgcggattgcacgcattggtgcctccc 1571
>ref|NM_001051233.1| Oryza sativa (japonica cultivar-group) Os01g0830700 (Os01g0830700) mRNA, complete cds Length = 2019 Score = 63.9 bits (32), Expect = 2e-06 Identities = 56/64 (87%) Strand = Plus / Plus Query: 1270 ctacgccgactgcacgcattggtgcctccccggcgtcccggacgtgtggaaccacttcct 1329 |||||||||||||| || |||||||||||||||||||| ||| | ||||||| | |||| Sbjct: 1579 ctacgccgactgcatccactggtgcctccccggcgtccctgacatctggaacctcatcct 1638 Query: 1330 ctac 1333 |||| Sbjct: 1639 ctac 1642
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 63.9 bits (32), Expect = 2e-06 Identities = 56/64 (87%) Strand = Plus / Plus Query: 1270 ctacgccgactgcacgcattggtgcctccccggcgtcccggacgtgtggaaccacttcct 1329 |||||||||||||| || |||||||||||||||||||| ||| | ||||||| | |||| Sbjct: 35537145 ctacgccgactgcatccactggtgcctccccggcgtccctgacatctggaacctcatcct 35537204 Query: 1330 ctac 1333 |||| Sbjct: 35537205 ctac 35537208
>dbj|AP003252.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0446G04 Length = 143515 Score = 63.9 bits (32), Expect = 2e-06 Identities = 56/64 (87%) Strand = Plus / Plus Query: 1270 ctacgccgactgcacgcattggtgcctccccggcgtcccggacgtgtggaaccacttcct 1329 |||||||||||||| || |||||||||||||||||||| ||| | ||||||| | |||| Sbjct: 67332 ctacgccgactgcatccactggtgcctccccggcgtccctgacatctggaacctcatcct 67391 Query: 1330 ctac 1333 |||| Sbjct: 67392 ctac 67395
>dbj|AK105654.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-200-G05, full insert sequence Length = 1965 Score = 63.9 bits (32), Expect = 2e-06 Identities = 56/64 (87%) Strand = Plus / Plus Query: 1270 ctacgccgactgcacgcattggtgcctccccggcgtcccggacgtgtggaaccacttcct 1329 |||||||||||||| || |||||||||||||||||||| ||| | ||||||| | |||| Sbjct: 1538 ctacgccgactgcatccactggtgcctccccggcgtccctgacatctggaacctcatcct 1597 Query: 1330 ctac 1333 |||| Sbjct: 1598 ctac 1601
>dbj|AK101671.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033058D09, full insert sequence Length = 2020 Score = 63.9 bits (32), Expect = 2e-06 Identities = 56/64 (87%) Strand = Plus / Plus Query: 1270 ctacgccgactgcacgcattggtgcctccccggcgtcccggacgtgtggaaccacttcct 1329 |||||||||||||| || |||||||||||||||||||| ||| | ||||||| | |||| Sbjct: 1580 ctacgccgactgcatccactggtgcctccccggcgtccctgacatctggaacctcatcct 1639 Query: 1330 ctac 1333 |||| Sbjct: 1640 ctac 1643
>emb|CT833154.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCEA055D24, full insert sequence Length = 1887 Score = 56.0 bits (28), Expect = 4e-04 Identities = 55/64 (85%) Strand = Plus / Plus Query: 1270 ctacgccgactgcacgcattggtgcctccccggcgtcccggacgtgtggaaccacttcct 1329 |||||||||||||| || ||||||||||| ||| |||| ||| |||||||||||||| Sbjct: 1754 ctacgccgactgcatccactggtgcctccctggcctccccgacacctggaaccacttcct 1813 Query: 1330 ctac 1333 |||| Sbjct: 1814 ctac 1817
>ref|NM_001067266.1| Oryza sativa (japonica cultivar-group) Os07g0693600 (Os07g0693600) mRNA, complete cds Length = 2056 Score = 56.0 bits (28), Expect = 4e-04 Identities = 55/64 (85%) Strand = Plus / Plus Query: 1270 ctacgccgactgcacgcattggtgcctccccggcgtcccggacgtgtggaaccacttcct 1329 |||||||||||||| || ||||||||||| ||| |||| ||| |||||||||||||| Sbjct: 1729 ctacgccgactgcatccactggtgcctccctggcctccccgacacctggaaccacttcct 1788 Query: 1330 ctac 1333 |||| Sbjct: 1789 ctac 1792
>ref|NM_001062342.1| Oryza sativa (japonica cultivar-group) Os05g0470000 (Os05g0470000) mRNA, partial cds Length = 2035 Score = 56.0 bits (28), Expect = 4e-04 Identities = 46/52 (88%) Strand = Plus / Plus Query: 1271 tacgccgactgcacgcattggtgcctccccggcgtcccggacgtgtggaacc 1322 ||||| ||||||| || |||||||||||||||||||| ||||| ||||||| Sbjct: 1435 tacgcggactgcatccactggtgcctccccggcgtccccgacgtctggaacc 1486
>gb|AC121364.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0052E20, complete sequence Length = 162434 Score = 56.0 bits (28), Expect = 4e-04 Identities = 46/52 (88%) Strand = Plus / Minus Query: 1271 tacgccgactgcacgcattggtgcctccccggcgtcccggacgtgtggaacc 1322 ||||| ||||||| || |||||||||||||||||||| ||||| ||||||| Sbjct: 40338 tacgcggactgcatccactggtgcctccccggcgtccccgacgtctggaacc 40287
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7 Length = 29644043 Score = 56.0 bits (28), Expect = 4e-04 Identities = 55/64 (85%) Strand = Plus / Minus Query: 1270 ctacgccgactgcacgcattggtgcctccccggcgtcccggacgtgtggaaccacttcct 1329 |||||||||||||| || ||||||||||| ||| |||| ||| |||||||||||||| Sbjct: 29458979 ctacgccgactgcatccactggtgcctccctggcctccccgacacctggaaccacttcct 29458920 Query: 1330 ctac 1333 |||| Sbjct: 29458919 ctac 29458916 Score = 50.1 bits (25), Expect = 0.024 Identities = 31/33 (93%) Strand = Plus / Plus Query: 1289 tggtgcctccccggcgtcccggacgtgtggaac 1321 ||||||||||||||||| ||||||| ||||||| Sbjct: 27533711 tggtgcctccccggcgtgccggacgcgtggaac 27533743
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5 Length = 29737217 Score = 56.0 bits (28), Expect = 4e-04 Identities = 46/52 (88%) Strand = Plus / Minus Query: 1271 tacgccgactgcacgcattggtgcctccccggcgtcccggacgtgtggaacc 1322 ||||| ||||||| || |||||||||||||||||||| ||||| ||||||| Sbjct: 22936325 tacgcggactgcatccactggtgcctccccggcgtccccgacgtctggaacc 22936274
>dbj|AK119589.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-117-D01, full insert sequence Length = 2056 Score = 56.0 bits (28), Expect = 4e-04 Identities = 55/64 (85%) Strand = Plus / Plus Query: 1270 ctacgccgactgcacgcattggtgcctccccggcgtcccggacgtgtggaaccacttcct 1329 |||||||||||||| || ||||||||||| ||| |||| ||| |||||||||||||| Sbjct: 1729 ctacgccgactgcatccactggtgcctccctggcctccccgacacctggaaccacttcct 1788 Query: 1330 ctac 1333 |||| Sbjct: 1789 ctac 1792
>dbj|AK108401.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-142-G04, full insert sequence Length = 884 Score = 56.0 bits (28), Expect = 4e-04 Identities = 55/64 (85%) Strand = Plus / Minus Query: 1270 ctacgccgactgcacgcattggtgcctccccggcgtcccggacgtgtggaaccacttcct 1329 |||||||||||||| || ||||||||||| ||| |||| ||| |||||||||||||| Sbjct: 240 ctacgccgactgcatccactggtgcctccctggcctccccgacacctggaaccacttcct 181 Query: 1330 ctac 1333 |||| Sbjct: 180 ctac 177
>dbj|AK065359.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013007F12, full insert sequence Length = 2034 Score = 56.0 bits (28), Expect = 4e-04 Identities = 46/52 (88%) Strand = Plus / Plus Query: 1271 tacgccgactgcacgcattggtgcctccccggcgtcccggacgtgtggaacc 1322 ||||| ||||||| || |||||||||||||||||||| ||||| ||||||| Sbjct: 1434 tacgcggactgcatccactggtgcctccccggcgtccccgacgtctggaacc 1485
>dbj|AP004333.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0034A04 Length = 151263 Score = 56.0 bits (28), Expect = 4e-04 Identities = 55/64 (85%) Strand = Plus / Minus Query: 1270 ctacgccgactgcacgcattggtgcctccccggcgtcccggacgtgtggaaccacttcct 1329 |||||||||||||| || ||||||||||| ||| |||| ||| |||||||||||||| Sbjct: 121901 ctacgccgactgcatccactggtgcctccctggcctccccgacacctggaaccacttcct 121842 Query: 1330 ctac 1333 |||| Sbjct: 121841 ctac 121838
>ref|NM_001064799.1| Oryza sativa (japonica cultivar-group) Os06g0659400 (Os06g0659400) mRNA, complete cds Length = 1621 Score = 50.1 bits (25), Expect = 0.024 Identities = 31/33 (93%) Strand = Plus / Plus Query: 1289 tggtgcctccccggcgtcccggacgtgtggaac 1321 ||||||||||||||||| ||||||| ||||||| Sbjct: 1389 tggtgcctccccggcgtgccggacgcgtggaac 1421
>emb|CT986169.1| partial cDNA sequence from a Lambda ZAP II normalized full-length cDNA library of differentiating xylem from Eucalyptus gunnii Length = 491 Score = 50.1 bits (25), Expect = 0.024 Identities = 118/149 (79%) Strand = Plus / Plus Query: 422 aggtaccagcattggagatggcagcccgatggatgtgatcttccaaggttcaacgccacc 481 ||||| ||||| ||||| ||||| ||| |||||||||| ||||| |||||||| ||||| Sbjct: 86 aggtatcagcaatggaggtggcaaccccatggatgtgaccttcctaggttcaatgccaca 145 Query: 482 aaactgctcgaaaagctgaggaacaagaggatggtcttcgtgggcgactcaatcaacagg 541 | || | || | | |||||||||||||| | || | |||||| ||||| | || | Sbjct: 146 gcattgttggagaggttgaggaacaagaggctcgtgtacgtgggtgactcgctgaatcga 205 Query: 542 aaccaatgggtctccatggtttgcatggt 570 |||||||||||||||||||||| |||| Sbjct: 206 ggccaatgggtctccatggtttgcctggt 234
>emb|CT985701.1| partial cDNA sequence from a Lambda ZAP II normalized full-length cDNA library of differentiating xylem from Eucalyptus gunnii Length = 491 Score = 50.1 bits (25), Expect = 0.024 Identities = 118/149 (79%) Strand = Plus / Plus Query: 422 aggtaccagcattggagatggcagcccgatggatgtgatcttccaaggttcaacgccacc 481 ||||| ||||| ||||| ||||| ||| |||||||||| ||||| |||||||| ||||| Sbjct: 86 aggtatcagcaatggaggtggcaaccccatggatgtgaccttcctaggttcaatgccaca 145 Query: 482 aaactgctcgaaaagctgaggaacaagaggatggtcttcgtgggcgactcaatcaacagg 541 | || | || | | |||||||||||||| | || | |||||| ||||| | || | Sbjct: 146 gcattgttggagaggttgaggaacaagaggctcgtgtacgtgggtgactcgctgaatcga 205 Query: 542 aaccaatgggtctccatggtttgcatggt 570 |||||||||||||||||||||| |||| Sbjct: 206 ggccaatgggtctccatggtttgcctggt 234
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6 Length = 30731886 Score = 50.1 bits (25), Expect = 0.024 Identities = 31/33 (93%) Strand = Plus / Plus Query: 1289 tggtgcctccccggcgtcccggacgtgtggaac 1321 ||||||||||||||||| ||||||| ||||||| Sbjct: 26766866 tggtgcctccccggcgtgccggacgcgtggaac 26766898
>dbj|AP005182.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0018C07 Length = 141707 Score = 50.1 bits (25), Expect = 0.024 Identities = 31/33 (93%) Strand = Plus / Plus Query: 1289 tggtgcctccccggcgtcccggacgtgtggaac 1321 ||||||||||||||||| ||||||| ||||||| Sbjct: 97682 tggtgcctccccggcgtgccggacgcgtggaac 97714
>dbj|AP005769.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0051O02 Length = 169532 Score = 50.1 bits (25), Expect = 0.024 Identities = 31/33 (93%) Strand = Plus / Plus Query: 1289 tggtgcctccccggcgtcccggacgtgtggaac 1321 ||||||||||||||||| ||||||| ||||||| Sbjct: 21492 tggtgcctccccggcgtgccggacgcgtggaac 21524
>dbj|AP005760.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:B1047G05 Length = 145431 Score = 50.1 bits (25), Expect = 0.024 Identities = 31/33 (93%) Strand = Plus / Plus Query: 1289 tggtgcctccccggcgtcccggacgtgtggaac 1321 ||||||||||||||||| ||||||| ||||||| Sbjct: 124329 tggtgcctccccggcgtgccggacgcgtggaac 124361
>dbj|AK106651.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-113-F10, full insert sequence Length = 1621 Score = 50.1 bits (25), Expect = 0.024 Identities = 31/33 (93%) Strand = Plus / Plus Query: 1289 tggtgcctccccggcgtcccggacgtgtggaac 1321 ||||||||||||||||| ||||||| ||||||| Sbjct: 1389 tggtgcctccccggcgtgccggacgcgtggaac 1421
>dbj|AP006077.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT46B01, TM0116, complete sequence Length = 121207 Score = 50.1 bits (25), Expect = 0.024 Identities = 25/25 (100%) Strand = Plus / Minus Query: 423 ggtaccagcattggagatggcagcc 447 ||||||||||||||||||||||||| Sbjct: 11664 ggtaccagcattggagatggcagcc 11640
>gb|BT018101.1| Zea mays clone EL01N0553B02.c mRNA sequence Length = 730 Score = 48.1 bits (24), Expect = 0.096 Identities = 54/64 (84%) Strand = Plus / Plus Query: 1270 ctacgccgactgcacgcattggtgcctccccggcgtcccggacgtgtggaaccacttcct 1329 |||||||||||||| || ||||||||||| || |||| ||| |||||||||||||| Sbjct: 534 ctacgccgactgcatccactggtgcctcccgggactccccgacacctggaaccacttcct 593 Query: 1330 ctac 1333 |||| Sbjct: 594 ctac 597
>ref|NM_001056335.1| Oryza sativa (japonica cultivar-group) Os03g0291800 (Os03g0291800) mRNA, partial cds Length = 2263 Score = 46.1 bits (23), Expect = 0.38 Identities = 53/63 (84%) Strand = Plus / Plus Query: 1271 tacgccgactgcacgcattggtgcctccccggcgtcccggacgtgtggaaccacttcctc 1330 ||||||||||||| || ||||||||||| ||| |||| ||| |||||||| |||||| Sbjct: 1710 tacgccgactgcatccactggtgcctcccgggcctccccgacacctggaaccagttcctc 1769 Query: 1331 tac 1333 ||| Sbjct: 1770 tac 1772
>gb|AC122898.4| Mus musculus BAC clone RP23-71K9 from 1, complete sequence Length = 230945 Score = 46.1 bits (23), Expect = 0.38 Identities = 23/23 (100%) Strand = Plus / Plus Query: 1353 catgatgtaaatatacatatgca 1375 ||||||||||||||||||||||| Sbjct: 49981 catgatgtaaatatacatatgca 50003 Score = 42.1 bits (21), Expect = 5.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1355 tgatgtaaatatacatatgca 1375 ||||||||||||||||||||| Sbjct: 49374 tgatgtaaatatacatatgca 49354
>gb|AC137634.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0078C05, complete sequence Length = 122116 Score = 46.1 bits (23), Expect = 0.38 Identities = 53/63 (84%) Strand = Plus / Plus Query: 1271 tacgccgactgcacgcattggtgcctccccggcgtcccggacgtgtggaaccacttcctc 1330 ||||||||||||| || ||||||||||| ||| |||| ||| |||||||| |||||| Sbjct: 70140 tacgccgactgcatccactggtgcctcccgggcctccccgacacctggaaccagttcctc 70199 Query: 1331 tac 1333 ||| Sbjct: 70200 tac 70202
>gb|AC018730.8| Homo sapiens BAC clone RP11-13J10 from 2, complete sequence Length = 154728 Score = 46.1 bits (23), Expect = 0.38 Identities = 23/23 (100%) Strand = Plus / Minus Query: 1353 catgatgtaaatatacatatgca 1375 ||||||||||||||||||||||| Sbjct: 66257 catgatgtaaatatacatatgca 66235
>gb|BT024109.1| Zea mays clone EL01N0518E03 mRNA sequence Length = 1885 Score = 46.1 bits (23), Expect = 0.38 Identities = 32/35 (91%) Strand = Plus / Plus Query: 1289 tggtgcctccccggcgtcccggacgtgtggaacca 1323 ||||||||||||||||| |||||| ||||||||| Sbjct: 1626 tggtgcctccccggcgtgccggacacgtggaacca 1660
>dbj|AK099139.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023050B10, full insert sequence Length = 2263 Score = 46.1 bits (23), Expect = 0.38 Identities = 53/63 (84%) Strand = Plus / Plus Query: 1271 tacgccgactgcacgcattggtgcctccccggcgtcccggacgtgtggaaccacttcctc 1330 ||||||||||||| || ||||||||||| ||| |||| ||| |||||||| |||||| Sbjct: 1710 tacgccgactgcatccactggtgcctcccgggcctccccgacacctggaaccagttcctc 1769 Query: 1331 tac 1333 ||| Sbjct: 1770 tac 1772
>dbj|AK070365.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023050A10, full insert sequence Length = 2263 Score = 46.1 bits (23), Expect = 0.38 Identities = 53/63 (84%) Strand = Plus / Plus Query: 1271 tacgccgactgcacgcattggtgcctccccggcgtcccggacgtgtggaaccacttcctc 1330 ||||||||||||| || ||||||||||| ||| |||| ||| |||||||| |||||| Sbjct: 1710 tacgccgactgcatccactggtgcctcccgggcctccccgacacctggaaccagttcctc 1769 Query: 1331 tac 1333 ||| Sbjct: 1770 tac 1772
>dbj|AK064880.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000J23, full insert sequence Length = 1747 Score = 46.1 bits (23), Expect = 0.38 Identities = 53/63 (84%) Strand = Plus / Plus Query: 1271 tacgccgactgcacgcattggtgcctccccggcgtcccggacgtgtggaaccacttcctc 1330 ||||||||||||| || ||||||||||| ||| |||| ||| |||||||| |||||| Sbjct: 1203 tacgccgactgcatccactggtgcctcccgggcctccccgacacctggaaccagttcctc 1262 Query: 1331 tac 1333 ||| Sbjct: 1263 tac 1265
>dbj|AK060829.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-C02, full insert sequence Length = 1189 Score = 46.1 bits (23), Expect = 0.38 Identities = 53/63 (84%) Strand = Plus / Plus Query: 1271 tacgccgactgcacgcattggtgcctccccggcgtcccggacgtgtggaaccacttcctc 1330 ||||||||||||| || ||||||||||| ||| |||| ||| |||||||| |||||| Sbjct: 637 tacgccgactgcatccactggtgcctcccgggcctccccgacacctggaaccagttcctc 696 Query: 1331 tac 1333 ||| Sbjct: 697 tac 699
>gb|AC133952.4| Mus musculus BAC clone RP23-114H2 from 1, complete sequence Length = 236382 Score = 46.1 bits (23), Expect = 0.38 Identities = 23/23 (100%) Strand = Plus / Minus Query: 1353 catgatgtaaatatacatatgca 1375 ||||||||||||||||||||||| Sbjct: 56537 catgatgtaaatatacatatgca 56515 Score = 42.1 bits (21), Expect = 5.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1355 tgatgtaaatatacatatgca 1375 ||||||||||||||||||||| Sbjct: 57144 tgatgtaaatatacatatgca 57164
>gb|AY111065.1| Zea mays CL4363_2 mRNA sequence Length = 1402 Score = 46.1 bits (23), Expect = 0.38 Identities = 32/35 (91%) Strand = Plus / Plus Query: 1289 tggtgcctccccggcgtcccggacgtgtggaacca 1323 ||||||||||||||||| |||||| ||||||||| Sbjct: 1046 tggtgcctccccggcgtgccggacacgtggaacca 1080
>emb|CT967319.2| M.truncatula DNA sequence from clone MTH2-59J17 on chromosome 3, complete sequence Length = 92243 Score = 44.1 bits (22), Expect = 1.5 Identities = 25/26 (96%) Strand = Plus / Plus Query: 791 gttttcaactcttacctttggtggag 816 ||||||||| |||||||||||||||| Sbjct: 48188 gttttcaacacttacctttggtggag 48213
>gb|AC091125.1| Caenorhabditis elegans cosmid Y67D2, complete sequence Length = 44364 Score = 44.1 bits (22), Expect = 1.5 Identities = 25/26 (96%) Strand = Plus / Plus Query: 123 tcttcatcgtcgtcagctccgtctcc 148 ||||||||||||||| |||||||||| Sbjct: 25264 tcttcatcgtcgtcatctccgtctcc 25289
>gb|CP000264.1| Jannaschia sp. CCS1, complete genome Length = 4317977 Score = 44.1 bits (22), Expect = 1.5 Identities = 25/26 (96%) Strand = Plus / Minus Query: 112 cctcgtcgccttcttcatcgtcgtca 137 |||||||||| ||||||||||||||| Sbjct: 3979565 cctcgtcgccgtcttcatcgtcgtca 3979540
>ref|NM_065020.3| Caenorhabditis elegans Y67D2.7 (Y67D2.7) mRNA, complete cds Length = 1335 Score = 44.1 bits (22), Expect = 1.5 Identities = 25/26 (96%) Strand = Plus / Minus Query: 123 tcttcatcgtcgtcagctccgtctcc 148 ||||||||||||||| |||||||||| Sbjct: 318 tcttcatcgtcgtcatctccgtctcc 293
>gb|AC130343.7| Homo sapiens chromosome 17, clone RP11-961A15, complete sequence Length = 217253 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Minus Query: 216 aggtggccgcggcggggcgccg 237 |||||||||||||||||||||| Sbjct: 92612 aggtggccgcggcggggcgccg 92591
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Minus Query: 211 ggtgaaggtggccgcggcgggg 232 |||||||||||||||||||||| Sbjct: 4878457 ggtgaaggtggccgcggcgggg 4878436
>gb|AC158191.2| Selaginella moellendorffii clone JGIASXY-5N22, complete sequence Length = 30068 Score = 44.1 bits (22), Expect = 1.5 Identities = 31/34 (91%) Strand = Plus / Minus Query: 498 tgaggaacaagaggatggtcttcgtgggcgactc 531 ||||||||||||||||| ||||| | |||||||| Sbjct: 17365 tgaggaacaagaggatgatcttcttcggcgactc 17332
>emb|BX004873.10| Zebrafish DNA sequence from clone CH211-149O24, complete sequence Length = 162892 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Plus Query: 772 gggcaatgctgacgttattgtt 793 |||||||||||||||||||||| Sbjct: 21057 gggcaatgctgacgttattgtt 21078
>dbj|AB052946.1| Homo sapiens gene for SREC, complete cds Length = 15202 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Plus Query: 216 aggtggccgcggcggggcgccg 237 |||||||||||||||||||||| Sbjct: 4736 aggtggccgcggcggggcgccg 4757
>gb|CP000462.1| Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genome Length = 4744448 Score = 42.1 bits (21), Expect = 5.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 360 gcctcaactgctccttcatcttcgacgag 388 ||||| ||||||||| ||||||||||||| Sbjct: 1091046 gcctctactgctcctccatcttcgacgag 1091018
>gb|BC116186.2| Homo sapiens intersectin 1 (SH3 domain protein), mRNA (cDNA clone MGC:134949 IMAGE:40073781), complete cds Length = 5557 Score = 42.1 bits (21), Expect = 5.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 68 tcctccccgtctcctgtgctcggcc 92 |||||||||||||||||||| |||| Sbjct: 2780 tcctccccgtctcctgtgctaggcc 2804
>ref|XM_001167054.1| PREDICTED: Pan troglodytes intersectin 1, transcript variant 4 (ITSN1), mRNA Length = 5299 Score = 42.1 bits (21), Expect = 5.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 68 tcctccccgtctcctgtgctcggcc 92 |||||||||||||||||||| |||| Sbjct: 3032 tcctccccgtctcctgtgctaggcc 3056
>ref|XM_001166583.1| PREDICTED: Pan troglodytes intersectin 1, transcript variant 1 (ITSN1), mRNA Length = 4530 Score = 42.1 bits (21), Expect = 5.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 68 tcctccccgtctcctgtgctcggcc 92 |||||||||||||||||||| |||| Sbjct: 3047 tcctccccgtctcctgtgctaggcc 3071
>ref|XM_001167026.1| PREDICTED: Pan troglodytes intersectin 1, transcript variant 3 (ITSN1), mRNA Length = 5527 Score = 42.1 bits (21), Expect = 5.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 68 tcctccccgtctcctgtgctcggcc 92 |||||||||||||||||||| |||| Sbjct: 3047 tcctccccgtctcctgtgctaggcc 3071
>ref|XM_531442.2| PREDICTED: Pan troglodytes intersectin 1, transcript variant 5 (ITSN1), mRNA Length = 5852 Score = 42.1 bits (21), Expect = 5.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 68 tcctccccgtctcctgtgctcggcc 92 |||||||||||||||||||| |||| Sbjct: 3032 tcctccccgtctcctgtgctaggcc 3056
>ref|XM_001166935.1| PREDICTED: Pan troglodytes intersectin 1, transcript variant 2 (ITSN1), mRNA Length = 7826 Score = 42.1 bits (21), Expect = 5.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 68 tcctccccgtctcctgtgctcggcc 92 |||||||||||||||||||| |||| Sbjct: 3047 tcctccccgtctcctgtgctaggcc 3071
>gb|DQ679757.1| Homo sapiens intersectin 1 short form variant 5 (ITSN1) mRNA, complete cds, alternatively spliced Length = 3783 Score = 42.1 bits (21), Expect = 5.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 68 tcctccccgtctcctgtgctcggcc 92 |||||||||||||||||||| |||| Sbjct: 2771 tcctccccgtctcctgtgctaggcc 2795
>gb|DQ679756.1| Homo sapiens intersectin 1 short form variant 2 (ITSN1) mRNA, complete cds, alternatively spliced Length = 3672 Score = 42.1 bits (21), Expect = 5.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 68 tcctccccgtctcctgtgctcggcc 92 |||||||||||||||||||| |||| Sbjct: 2660 tcctccccgtctcctgtgctaggcc 2684
>gb|DQ679755.1| Homo sapiens intersectin 1 short form variant 7 (ITSN1) mRNA, complete cds, alternatively spliced Length = 3585 Score = 42.1 bits (21), Expect = 5.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 68 tcctccccgtctcctgtgctcggcc 92 |||||||||||||||||||| |||| Sbjct: 2786 tcctccccgtctcctgtgctaggcc 2810
>gb|DQ679754.1| Homo sapiens intersectin 1 short form variant 6 (ITSN1) mRNA, complete cds, alternatively spliced Length = 3570 Score = 42.1 bits (21), Expect = 5.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 68 tcctccccgtctcctgtgctcggcc 92 |||||||||||||||||||| |||| Sbjct: 2771 tcctccccgtctcctgtgctaggcc 2795
>dbj|AK229103.1| Arabidopsis thaliana mRNA for hypothetical protein, complete cds, clone: RAFL16-38-J16 Length = 1964 Score = 42.1 bits (21), Expect = 5.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 114 tcgtcgccttcttcatcgtcg 134 ||||||||||||||||||||| Sbjct: 1260 tcgtcgccttcttcatcgtcg 1280
>gb|BC116185.1| Homo sapiens intersectin 1 (SH3 domain protein), mRNA (cDNA clone MGC:134948 IMAGE:40073780), complete cds Length = 5538 Score = 42.1 bits (21), Expect = 5.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 68 tcctccccgtctcctgtgctcggcc 92 |||||||||||||||||||| |||| Sbjct: 2765 tcctccccgtctcctgtgctaggcc 2789
>ref|XR_010969.1| PREDICTED: Macaca mulatta intersectin 1 (ITSN1), mRNA Length = 5721 Score = 42.1 bits (21), Expect = 5.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 68 tcctccccgtctcctgtgctcggcc 92 |||||||||||||||||||| |||| Sbjct: 2991 tcctccccgtctcctgtgctaggcc 3015
>gb|BC117560.1| Homo sapiens intersectin 1 (SH3 domain protein), mRNA (cDNA clone MGC:131486 IMAGE:7469144), complete cds Length = 4173 Score = 42.1 bits (21), Expect = 5.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 68 tcctccccgtctcctgtgctcggcc 92 |||||||||||||||||||| |||| Sbjct: 2934 tcctccccgtctcctgtgctaggcc 2958
>emb|CR936517.6| Zebrafish DNA sequence from clone DKEY-145J6 in linkage group 7, complete sequence Length = 60910 Score = 42.1 bits (21), Expect = 5.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 936 agtgggtgggagcgaatgtcaacaa 960 ||||| ||||||||||||||||||| Sbjct: 11744 agtggctgggagcgaatgtcaacaa 11720
>gb|DQ386455.1| Homo sapiens intersectin 1 short form transcript variant 8 (ITSN1) mRNA, complete cds, alternatively spliced Length = 3115 Score = 42.1 bits (21), Expect = 5.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 68 tcctccccgtctcctgtgctcggcc 92 |||||||||||||||||||| |||| Sbjct: 2705 tcctccccgtctcctgtgctaggcc 2729
>ref|NM_129388.2| Arabidopsis thaliana unknown protein (AT2G38320) mRNA, complete cds Length = 1538 Score = 42.1 bits (21), Expect = 5.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 788 attgttttcaactcttacctttggtggag 816 |||||||||||||||||| | |||||||| Sbjct: 866 attgttttcaactcttacttatggtggag 894
>ref|NM_100876.3| Arabidopsis thaliana unknown protein (AT1G10020) mRNA, complete cds Length = 1976 Score = 42.1 bits (21), Expect = 5.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 114 tcgtcgccttcttcatcgtcg 134 ||||||||||||||||||||| Sbjct: 1282 tcgtcgccttcttcatcgtcg 1302
>gb|AE014292.2| Brucella suis 1330 chromosome II, complete sequence Length = 1207381 Score = 42.1 bits (21), Expect = 5.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 113 ctcgtcgccttcttcatcgtc 133 ||||||||||||||||||||| Sbjct: 17442 ctcgtcgccttcttcatcgtc 17422
>ref|XM_503829.1| Yarrowia lipolytica CLIB122, YALI0E11649g predicted mRNA Length = 396 Score = 42.1 bits (21), Expect = 5.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 112 cctcgtcgccttcttcatcgtcgtc 136 |||||||||||||||| |||||||| Sbjct: 331 cctcgtcgccttcttcctcgtcgtc 307
>gb|AY603419.1| Homo sapiens intersectin 1 isoform 11 (ITSN1) mRNA, partial cds, alternatively spliced Length = 590 Score = 42.1 bits (21), Expect = 5.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 68 tcctccccgtctcctgtgctcggcc 92 |||||||||||||||||||| |||| Sbjct: 404 tcctccccgtctcctgtgctaggcc 428
>gb|BT012548.1| Arabidopsis thaliana At1g10020 gene, complete cds Length = 1386 Score = 42.1 bits (21), Expect = 5.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 114 tcgtcgccttcttcatcgtcg 134 ||||||||||||||||||||| Sbjct: 1027 tcgtcgccttcttcatcgtcg 1047
>gb|BT011247.1| Arabidopsis thaliana At1g10020 mRNA, complete cds Length = 1728 Score = 42.1 bits (21), Expect = 5.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 114 tcgtcgccttcttcatcgtcg 134 ||||||||||||||||||||| Sbjct: 1160 tcgtcgccttcttcatcgtcg 1180
>gb|AC159027.3| Pan troglodytes BAC clone CH251-477J21 from chromosome unknown, complete sequence Length = 212323 Score = 42.1 bits (21), Expect = 5.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 68 tcctccccgtctcctgtgctcggcc 92 |||||||||||||||||||| |||| Sbjct: 52606 tcctccccgtctcctgtgctaggcc 52630
>gb|AC004122.1| Arabidopsis thaliana chromosome I BAC T27I1 genomic sequence, complete sequence Length = 67878 Score = 42.1 bits (21), Expect = 5.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 114 tcgtcgccttcttcatcgtcg 134 ||||||||||||||||||||| Sbjct: 15612 tcgtcgccttcttcatcgtcg 15592
>gb|AC160654.3| Pan troglodytes BAC clone CH251-409B17 from chromosome unknown, complete sequence Length = 164127 Score = 42.1 bits (21), Expect = 5.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 68 tcctccccgtctcctgtgctcggcc 92 |||||||||||||||||||| |||| Sbjct: 72341 tcctccccgtctcctgtgctaggcc 72317
>ref|XM_381476.1| Gibberella zeae PH-1 chromosome 1 hypothetical protein (FG01300.1) partial mRNA Length = 2025 Score = 42.1 bits (21), Expect = 5.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 112 cctcgtcgccttcttcatcgtcgtc 136 |||||||||||||||| |||||||| Sbjct: 1687 cctcgtcgccttcttcctcgtcgtc 1663
>gb|AF370310.1| Arabidopsis thaliana unknown protein (At2g38320) mRNA, complete cds Length = 1419 Score = 42.1 bits (21), Expect = 5.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 788 attgttttcaactcttacctttggtggag 816 |||||||||||||||||| | |||||||| Sbjct: 731 attgttttcaactcttacttatggtggag 759
>gb|AF114488.1| Homo sapiens intersectin short isoform (ITSN) mRNA, complete cds Length = 5381 Score = 42.1 bits (21), Expect = 5.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 68 tcctccccgtctcctgtgctcggcc 92 |||||||||||||||||||| |||| Sbjct: 2969 tcctccccgtctcctgtgctaggcc 2993
>gb|AF114487.1| Homo sapiens intersectin long isoform (ITSN) mRNA, complete cds Length = 6439 Score = 42.1 bits (21), Expect = 5.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 68 tcctccccgtctcctgtgctcggcc 92 |||||||||||||||||||| |||| Sbjct: 2969 tcctccccgtctcctgtgctaggcc 2993
>gb|AC010467.9| Homo sapiens chromosome 19 clone CTD-2287F5, complete sequence Length = 144301 Score = 42.1 bits (21), Expect = 5.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 527 gactcaatcaacaggaaccaa 547 ||||||||||||||||||||| Sbjct: 137612 gactcaatcaacaggaaccaa 137592
>gb|AC004683.3| Arabidopsis thaliana chromosome 2 clone T19C21 map ve018, complete sequence Length = 81467 Score = 42.1 bits (21), Expect = 5.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 788 attgttttcaactcttacctttggtggag 816 |||||||||||||||||| | |||||||| Sbjct: 64278 attgttttcaactcttacttatggtggag 64250
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 42.1 bits (21), Expect = 5.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 55 ggcgacggcgacgtcctcccc 75 ||||||||||||||||||||| Sbjct: 4668237 ggcgacggcgacgtcctcccc 4668217
>ref|NM_003024.2| Homo sapiens intersectin 1 (SH3 domain protein) (ITSN1), transcript variant 1, mRNA Length = 6439 Score = 42.1 bits (21), Expect = 5.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 68 tcctccccgtctcctgtgctcggcc 92 |||||||||||||||||||| |||| Sbjct: 2969 tcctccccgtctcctgtgctaggcc 2993
>ref|NM_001001132.1| Homo sapiens intersectin 1 (SH3 domain protein) (ITSN1), transcript variant 2, mRNA Length = 5451 Score = 42.1 bits (21), Expect = 5.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 68 tcctccccgtctcctgtgctcggcc 92 |||||||||||||||||||| |||| Sbjct: 2969 tcctccccgtctcctgtgctaggcc 2993
>dbj|AP000050.1| Homo sapiens genomic DNA, chromosome 21q22.1, segment 21/28, complete sequence Length = 114929 Score = 42.1 bits (21), Expect = 5.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 68 tcctccccgtctcctgtgctcggcc 92 |||||||||||||||||||| |||| Sbjct: 5237 tcctccccgtctcctgtgctaggcc 5261
>emb|BX538175.1|HSM806384 Homo sapiens mRNA; cDNA DKFZp686J17173 (from clone DKFZp686J17173) Length = 4321 Score = 42.1 bits (21), Expect = 5.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 68 tcctccccgtctcctgtgctcggcc 92 |||||||||||||||||||| |||| Sbjct: 2253 tcctccccgtctcctgtgctaggcc 2277
>emb|AL663013.4|OSJN00214 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0089K06, complete sequence Length = 129608 Score = 42.1 bits (21), Expect = 5.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 55 ggcgacggcgacgtcctcccc 75 ||||||||||||||||||||| Sbjct: 58370 ggcgacggcgacgtcctcccc 58350
>gb|AE009646.1| Brucella melitensis 16M chromosome II, section 8 of 107 of the complete sequence Length = 9100 Score = 42.1 bits (21), Expect = 5.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 113 ctcgtcgccttcttcatcgtc 133 ||||||||||||||||||||| Sbjct: 611 ctcgtcgccttcttcatcgtc 631
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 42.1 bits (21), Expect = 5.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 210 aggtgaaggtggccgcggcgg 230 ||||||||||||||||||||| Sbjct: 5902383 aggtgaaggtggccgcggcgg 5902363
>dbj|BS000183.1| Pan troglodytes chromosome 22 clone:PTB-086H16, map 22, partial sequences, complete sequence Length = 52814 Score = 42.1 bits (21), Expect = 5.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 68 tcctccccgtctcctgtgctcggcc 92 |||||||||||||||||||| |||| Sbjct: 39054 tcctccccgtctcctgtgctaggcc 39078
>gb|DQ340865.1| Homo sapiens intersectin 1 short form (ITSN1) mRNA, partial cds Length = 5177 Score = 42.1 bits (21), Expect = 5.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 68 tcctccccgtctcctgtgctcggcc 92 |||||||||||||||||||| |||| Sbjct: 2682 tcctccccgtctcctgtgctaggcc 2706
>emb|BX815131.1|CNS0ACYU Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS36ZG06 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1831 Score = 42.1 bits (21), Expect = 5.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 114 tcgtcgccttcttcatcgtcg 134 ||||||||||||||||||||| Sbjct: 1263 tcgtcgccttcttcatcgtcg 1283
>emb|BX813941.1|CNS0ADQX Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB49ZC04 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1861 Score = 42.1 bits (21), Expect = 5.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 114 tcgtcgccttcttcatcgtcg 134 ||||||||||||||||||||| Sbjct: 1259 tcgtcgccttcttcatcgtcg 1279
>gb|AE017224.1| Brucella abortus biovar 1 str. 9-941 chromosome II, complete sequence Length = 1162204 Score = 42.1 bits (21), Expect = 5.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 113 ctcgtcgccttcttcatcgtc 133 ||||||||||||||||||||| Sbjct: 17261 ctcgtcgccttcttcatcgtc 17241
>dbj|AP001718.1| Homo sapiens genomic DNA, chromosome 21q, section 62/105 Length = 340000 Score = 42.1 bits (21), Expect = 5.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 68 tcctccccgtctcctgtgctcggcc 92 |||||||||||||||||||| |||| Sbjct: 83998 tcctccccgtctcctgtgctaggcc 84022
>gb|AF064244.1|AF064244 Homo sapiens intersectin long form mRNA, complete cds Length = 7247 Score = 42.1 bits (21), Expect = 5.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 68 tcctccccgtctcctgtgctcggcc 92 |||||||||||||||||||| |||| Sbjct: 2807 tcctccccgtctcctgtgctaggcc 2831
>gb|AF064243.1|AF064243 Homo sapiens intersectin short form mRNA, complete cds Length = 5287 Score = 42.1 bits (21), Expect = 5.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 68 tcctccccgtctcctgtgctcggcc 92 |||||||||||||||||||| |||| Sbjct: 2807 tcctccccgtctcctgtgctaggcc 2831
>emb|BX322597.3| Zebrafish DNA sequence from clone RP71-7L19 in linkage group 4, complete sequence Length = 173945 Score = 42.1 bits (21), Expect = 5.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 773 ggcaatgctgacgttattgtt 793 ||||||||||||||||||||| Sbjct: 94823 ggcaatgctgacgttattgtt 94843
>gb|U61166.1|HSU61166 Human SH3 domain-containing protein SH3P17 mRNA, complete cds Length = 3241 Score = 42.1 bits (21), Expect = 5.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 68 tcctccccgtctcctgtgctcggcc 92 |||||||||||||||||||| |||| Sbjct: 850 tcctccccgtctcctgtgctaggcc 874
>emb|AM040265.1| Brucella melitensis biovar Abortus chromosome II, complete sequence, strain 2308 Length = 1156948 Score = 42.1 bits (21), Expect = 5.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 113 ctcgtcgccttcttcatcgtc 133 ||||||||||||||||||||| Sbjct: 17310 ctcgtcgccttcttcatcgtc 17290
>emb|CR382131.1| Yarrowia lipolytica chromosome E of strain CLIB 122 of Yarrowia lipolytica Length = 4224103 Score = 42.1 bits (21), Expect = 5.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 112 cctcgtcgccttcttcatcgtcgtc 136 |||||||||||||||| |||||||| Sbjct: 1425041 cctcgtcgccttcttcctcgtcgtc 1425065
>dbj|AP000193.1| Homo sapiens genomic DNA, chromosome 21q22.1, D21S226-AML region, clone Q78C10-f32E9, segment 20/21, complete sequence Length = 100000 Score = 42.1 bits (21), Expect = 5.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 68 tcctccccgtctcctgtgctcggcc 92 |||||||||||||||||||| |||| Sbjct: 41824 tcctccccgtctcctgtgctaggcc 41848
>dbj|AP000311.1| Homo sapiens genomic DNA, chromosome 21q22.1, D21S226-AML region, clone:130N6, complete sequence Length = 125242 Score = 42.1 bits (21), Expect = 5.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 68 tcctccccgtctcctgtgctcggcc 92 |||||||||||||||||||| |||| Sbjct: 105237 tcctccccgtctcctgtgctaggcc 105261
>dbj|AP000117.1| Homo sapiens genomic DNA of 21q22.1, GART and AML related, Q78C10-149C3 region, segment 20/20 Length = 151516 Score = 42.1 bits (21), Expect = 5.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 68 tcctccccgtctcctgtgctcggcc 92 |||||||||||||||||||| |||| Sbjct: 41824 tcctccccgtctcctgtgctaggcc 41848 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 233,559,101 Number of extensions: 12291329 Number of successful extensions: 263977 Number of sequences better than 10.0: 122 Number of HSP's gapped: 263967 Number of HSP's successfully gapped: 184 Length of query: 1562 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1539 Effective length of database: 18,503,978,556 Effective search space: 28477622997684 Effective search space used: 28477622997684 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)
