ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf132c23 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_001060674.1| Oryza sativa (japonica cultivar-group) Os04g0659900 (Os04g0659900) mRNA, partial cds Length = 1691 Score = 351 bits (177), Expect = 7e-93 Identities = 410/485 (84%), Gaps = 2/485 (0%) Strand = Plus / Plus Query: 221 agctgctgccggaggaggaggacgacctgtggcacgcgtacaatctcatcgccgtcgggg 280 ||||| |||||||||||||||||||||||||||| || ||||| || || | |||| Sbjct: 213 agctggtgccggaggaggaggacgacctgtggcatgcctacaaccttattgttccggggg 272 Query: 281 acagcctccaggccgtcactgtccggaaagttctcagggattctgcttctggtgggcgtg 340 | | ||||||| |||||||||| |||||||||| || || || ||||| || |||| Sbjct: 273 ataccctccagtccgtcactgtgaggaaagttctgagagagatggcatctggaggacgtg 332 Query: 341 atgcggagcgcgtgaagctcaagttggaaattgtagttgagtctgtagattatgacaagg 400 |||| ||||| |||| | | ||||||||||||||||| ||||||||||||||||| |||| Sbjct: 333 atgctgagcgtgtgaggttaaagttggaaattgtagtcgagtctgtagattatgataagg 392 Query: 401 aggggaatgttttgcgagtgcgtggcaaaaatattactgagaatgatcacgtgaagattg 460 |||| ||| ||||| || ||||| |||||||| |||||||| ||||| |||||||||| Sbjct: 393 agggatctgtcttgcgtgtacgtggaaaaaatataactgagaacgatcatgtgaagattg 452 Query: 461 gccagtttcatactttagaacttgagctgaagagaccttttgttct-acgaaaggaatat 519 | |||||||||||| | || |||||||||||||||| ||| | | ||||| |||| | Sbjct: 453 gacagtttcatactgtggagcttgagctgaagagacaatttactttgacgaa-ggaactt 511 Query: 520 tgggattggttagcacttgataccatccaacaagcatgtgatcctactgcaagtgctgat 579 |||||||||||||| |||||||||||||||||||||||||| || ||||||||||||||| Sbjct: 512 tgggattggttagctcttgataccatccaacaagcatgtgacccaactgcaagtgctgat 571 Query: 580 ctagcagttattcttatgcaagaaggacttgcccacttattccttattgggagaagcata 639 |||||||||||||| ||||||||||||||||| || || ||||| ||||| ||||||||| Sbjct: 572 ctagcagttattctcatgcaagaaggacttgcacatttgttcctcattggtagaagcata 631 Query: 640 acagcaacaaggtcacgcattgaaacatcgatccctaggaaacatggacctgccattgct 699 |||| ||| || |||| ||||||||||| || ||| |||| ||||| ||||| |||||| Sbjct: 632 acagtaaccagagcacgtattgaaacatctattcctcggaagcatggccctgcgattgct 691 Query: 700 ggtta 704 ||||| Sbjct: 692 ggtta 696 Score = 226 bits (114), Expect = 3e-55 Identities = 165/182 (90%) Strand = Plus / Plus Query: 740 tacaagctttgctgaagcacattgatttcgaagtggtccaatgtgttgtaattgcaagcc 799 |||| ||||| |||||||| |||||||| ||||| |||||||||| |||||||||||||| Sbjct: 892 tacaggctttcctgaagcatattgattttgaagtagtccaatgtgctgtaattgcaagcc 951 Query: 800 caggttttactaaggatcagtttcgtgattacatgcatcttgaagctgcacggcgagact 859 |||||||||||||||||||||| || ||||| |||||||||||||||||||||||||||| Sbjct: 952 caggttttactaaggatcagttccgcgattatatgcatcttgaagctgcacggcgagact 1011 Query: 860 tgagagtaataattgagaataaatcacgcattattcttgcacatgcaccttcaggctaca 919 | ||| ||||||||||||| ||| |||||| |||||||||||||||||||||| |||| Sbjct: 1012 taagattaataattgagaacaaacagcgcattgttcttgcacatgcaccttcaggttaca 1071 Query: 920 ag 921 || Sbjct: 1072 ag 1073 Score = 117 bits (59), Expect = 2e-22 Identities = 158/191 (82%) Strand = Plus / Plus Query: 1376 tcagcccgagcgtgttatggacctaagcatgttgaggttgcacatgagcgccttgcaata 1435 ||||| ||||| |||||||||||||||||||||||| ||||| |||| || ||||| || Sbjct: 1259 tcagctcgagcttgttatggacctaagcatgttgagattgcaaatgaacgtcttgctatc 1318 Query: 1436 caaactcttctgatgacagatactttgtttcggaacacggacatcgttagcaggagaaag 1495 ||||||||| | || ||||||| ||||||||||||| | ||||| | | ||| ||| Sbjct: 1319 caaactcttttaataacagataatttgtttcggaactctgacattgcaacgaggcaaaat 1378 Query: 1496 tatgtgaacttggttgagtcagtcaagaaatatggtggtacagtgcacatattttcttcg 1555 |||||| ||||||||| || || || |||| ||||| ||||||||||| |||||||| Sbjct: 1379 tatgtgcgcttggttgaatcggtaaaaaaattcggtggcacagtgcacatcttttcttca 1438 Query: 1556 atgcatgtctc 1566 ||||||||||| Sbjct: 1439 atgcatgtctc 1449 Score = 105 bits (53), Expect = 7e-19 Identities = 68/73 (93%) Strand = Plus / Plus Query: 1848 ttggcgcagttgacaggaatagcagctatacttcgattccccctgccagatttggaggac 1907 |||||||||||||||||||| ||||||||||||||||| ||| |||||||||| |||||| Sbjct: 1460 ttggcgcagttgacaggaatcgcagctatacttcgatttcccttgccagatttagaggac 1519 Query: 1908 atcgagatgtgat 1920 || |||||||||| Sbjct: 1520 attgagatgtgat 1532 Score = 97.6 bits (49), Expect = 2e-16 Identities = 79/89 (88%) Strand = Plus / Plus Query: 1269 tgaaggaagttttggacaccccaggtgtgatgtcactgataaaagatacaaaagcggcac 1328 |||||||||||||||| | |||| |||||||| |||| |||||||||||||| ||||| | Sbjct: 1081 tgaaggaagttttggatagcccaagtgtgatgacactaataaaagatacaaaggcggcgc 1140 Query: 1329 aggaggtgcaagctttgaaagagttcttc 1357 ||||||| ||||||||||| || |||||| Sbjct: 1141 aggaggtccaagctttgaaggacttcttc 1169 Score = 73.8 bits (37), Expect = 2e-09 Identities = 49/53 (92%) Strand = Plus / Plus Query: 170 cgatgaagctcgtccaccgcaatctcgcccgcaacgggcccggctccgccaag 222 |||||||||||||| ||||||| |||||||||||||| |||||||||| |||| Sbjct: 139 cgatgaagctcgtctaccgcaacctcgcccgcaacggccccggctccgtcaag 191 Score = 46.1 bits (23), Expect = 0.54 Identities = 29/31 (93%) Strand = Plus / Plus Query: 715 ctcaagaagttctttgagcatgttttacaag 745 ||||||||||||||||| |||||||| |||| Sbjct: 785 ctcaagaagttctttgaacatgttttgcaag 815
>dbj|AK060780.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-033-C05, full insert sequence Length = 1691 Score = 351 bits (177), Expect = 7e-93 Identities = 410/485 (84%), Gaps = 2/485 (0%) Strand = Plus / Plus Query: 221 agctgctgccggaggaggaggacgacctgtggcacgcgtacaatctcatcgccgtcgggg 280 ||||| |||||||||||||||||||||||||||| || ||||| || || | |||| Sbjct: 213 agctggtgccggaggaggaggacgacctgtggcatgcctacaaccttattgttccggggg 272 Query: 281 acagcctccaggccgtcactgtccggaaagttctcagggattctgcttctggtgggcgtg 340 | | ||||||| |||||||||| |||||||||| || || || ||||| || |||| Sbjct: 273 ataccctccagtccgtcactgtgaggaaagttctgagagagatggcatctggaggacgtg 332 Query: 341 atgcggagcgcgtgaagctcaagttggaaattgtagttgagtctgtagattatgacaagg 400 |||| ||||| |||| | | ||||||||||||||||| ||||||||||||||||| |||| Sbjct: 333 atgctgagcgtgtgaggttaaagttggaaattgtagtcgagtctgtagattatgataagg 392 Query: 401 aggggaatgttttgcgagtgcgtggcaaaaatattactgagaatgatcacgtgaagattg 460 |||| ||| ||||| || ||||| |||||||| |||||||| ||||| |||||||||| Sbjct: 393 agggatctgtcttgcgtgtacgtggaaaaaatataactgagaacgatcatgtgaagattg 452 Query: 461 gccagtttcatactttagaacttgagctgaagagaccttttgttct-acgaaaggaatat 519 | |||||||||||| | || |||||||||||||||| ||| | | ||||| |||| | Sbjct: 453 gacagtttcatactgtggagcttgagctgaagagacaatttactttgacgaa-ggaactt 511 Query: 520 tgggattggttagcacttgataccatccaacaagcatgtgatcctactgcaagtgctgat 579 |||||||||||||| |||||||||||||||||||||||||| || ||||||||||||||| Sbjct: 512 tgggattggttagctcttgataccatccaacaagcatgtgacccaactgcaagtgctgat 571 Query: 580 ctagcagttattcttatgcaagaaggacttgcccacttattccttattgggagaagcata 639 |||||||||||||| ||||||||||||||||| || || ||||| ||||| ||||||||| Sbjct: 572 ctagcagttattctcatgcaagaaggacttgcacatttgttcctcattggtagaagcata 631 Query: 640 acagcaacaaggtcacgcattgaaacatcgatccctaggaaacatggacctgccattgct 699 |||| ||| || |||| ||||||||||| || ||| |||| ||||| ||||| |||||| Sbjct: 632 acagtaaccagagcacgtattgaaacatctattcctcggaagcatggccctgcgattgct 691 Query: 700 ggtta 704 ||||| Sbjct: 692 ggtta 696 Score = 226 bits (114), Expect = 3e-55 Identities = 165/182 (90%) Strand = Plus / Plus Query: 740 tacaagctttgctgaagcacattgatttcgaagtggtccaatgtgttgtaattgcaagcc 799 |||| ||||| |||||||| |||||||| ||||| |||||||||| |||||||||||||| Sbjct: 892 tacaggctttcctgaagcatattgattttgaagtagtccaatgtgctgtaattgcaagcc 951 Query: 800 caggttttactaaggatcagtttcgtgattacatgcatcttgaagctgcacggcgagact 859 |||||||||||||||||||||| || ||||| |||||||||||||||||||||||||||| Sbjct: 952 caggttttactaaggatcagttccgcgattatatgcatcttgaagctgcacggcgagact 1011 Query: 860 tgagagtaataattgagaataaatcacgcattattcttgcacatgcaccttcaggctaca 919 | ||| ||||||||||||| ||| |||||| |||||||||||||||||||||| |||| Sbjct: 1012 taagattaataattgagaacaaacagcgcattgttcttgcacatgcaccttcaggttaca 1071 Query: 920 ag 921 || Sbjct: 1072 ag 1073 Score = 117 bits (59), Expect = 2e-22 Identities = 158/191 (82%) Strand = Plus / Plus Query: 1376 tcagcccgagcgtgttatggacctaagcatgttgaggttgcacatgagcgccttgcaata 1435 ||||| ||||| |||||||||||||||||||||||| ||||| |||| || ||||| || Sbjct: 1259 tcagctcgagcttgttatggacctaagcatgttgagattgcaaatgaacgtcttgctatc 1318 Query: 1436 caaactcttctgatgacagatactttgtttcggaacacggacatcgttagcaggagaaag 1495 ||||||||| | || ||||||| ||||||||||||| | ||||| | | ||| ||| Sbjct: 1319 caaactcttttaataacagataatttgtttcggaactctgacattgcaacgaggcaaaat 1378 Query: 1496 tatgtgaacttggttgagtcagtcaagaaatatggtggtacagtgcacatattttcttcg 1555 |||||| ||||||||| || || || |||| ||||| ||||||||||| |||||||| Sbjct: 1379 tatgtgcgcttggttgaatcggtaaaaaaattcggtggcacagtgcacatcttttcttca 1438 Query: 1556 atgcatgtctc 1566 ||||||||||| Sbjct: 1439 atgcatgtctc 1449 Score = 105 bits (53), Expect = 7e-19 Identities = 68/73 (93%) Strand = Plus / Plus Query: 1848 ttggcgcagttgacaggaatagcagctatacttcgattccccctgccagatttggaggac 1907 |||||||||||||||||||| ||||||||||||||||| ||| |||||||||| |||||| Sbjct: 1460 ttggcgcagttgacaggaatcgcagctatacttcgatttcccttgccagatttagaggac 1519 Query: 1908 atcgagatgtgat 1920 || |||||||||| Sbjct: 1520 attgagatgtgat 1532 Score = 97.6 bits (49), Expect = 2e-16 Identities = 79/89 (88%) Strand = Plus / Plus Query: 1269 tgaaggaagttttggacaccccaggtgtgatgtcactgataaaagatacaaaagcggcac 1328 |||||||||||||||| | |||| |||||||| |||| |||||||||||||| ||||| | Sbjct: 1081 tgaaggaagttttggatagcccaagtgtgatgacactaataaaagatacaaaggcggcgc 1140 Query: 1329 aggaggtgcaagctttgaaagagttcttc 1357 ||||||| ||||||||||| || |||||| Sbjct: 1141 aggaggtccaagctttgaaggacttcttc 1169 Score = 73.8 bits (37), Expect = 2e-09 Identities = 49/53 (92%) Strand = Plus / Plus Query: 170 cgatgaagctcgtccaccgcaatctcgcccgcaacgggcccggctccgccaag 222 |||||||||||||| ||||||| |||||||||||||| |||||||||| |||| Sbjct: 139 cgatgaagctcgtctaccgcaacctcgcccgcaacggccccggctccgtcaag 191 Score = 46.1 bits (23), Expect = 0.54 Identities = 29/31 (93%) Strand = Plus / Plus Query: 715 ctcaagaagttctttgagcatgttttacaag 745 ||||||||||||||||| |||||||| |||| Sbjct: 785 ctcaagaagttctttgaacatgttttgcaag 815
>dbj|AK073962.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033072B10, full insert sequence Length = 2773 Score = 283 bits (143), Expect = 1e-72 Identities = 331/391 (84%), Gaps = 2/391 (0%) Strand = Plus / Plus Query: 170 cgatgaagctcgtccaccgcaatctcgcccgcaacgggcccggctccgccaagctgctgc 229 |||||||||||||| ||||||| |||||||||||||| |||||||||| ||||||| ||| Sbjct: 150 cgatgaagctcgtctaccgcaacctcgcccgcaacggccccggctccgtcaagctggtgc 209 Query: 230 cggaggaggaggacgacctgtggcacgcgtacaatctcatcgccgtcggggacagcctcc 289 ||||||||||||||||||||||||| || ||||| || || | ||||| | ||||| Sbjct: 210 cggaggaggaggacgacctgtggcatgcctacaaccttattgttccgggggataccctcc 269 Query: 290 aggccgtcactgtccggaaagttctcagggattctgcttctggtgggcgtgatgcggagc 349 || |||||||||| |||||||||| || || || ||||| || |||||||| |||| Sbjct: 270 agtccgtcactgtgaggaaagttctgagagagatggcatctggaggacgtgatgctgagc 329 Query: 350 gcgtgaagctcaagttggaaattgtagttgagtctgtagattatgacaaggaggggaatg 409 | |||| | | ||||||||||||||||| ||||||||||||||||| |||||||| || Sbjct: 330 gtgtgaggttaaagttggaaattgtagtcgagtctgtagattatgataaggagggatctg 389 Query: 410 ttttgcgagtgcgtggcaaaaatattactgagaatgatcacgtgaagattggccagtttc 469 | ||||| || ||||| |||||||| |||||||| ||||| ||||||||||| ||||||| Sbjct: 390 tcttgcgtgtacgtggaaaaaatataactgagaacgatcatgtgaagattggacagtttc 449 Query: 470 atactttagaacttgagctgaagagac-cttttgttctacgaaaggaatattgggattgg 528 ||||| | || |||||||||||||||| ||| || ||| |||||| |||||||||| Sbjct: 450 atactgtggagcttgagctgaagagacaatttactttgacg-aaggaactttgggattgg 508 Query: 529 ttagcacttgataccatccaacaagcatgtg 559 ||||| ||||||||||||||||||||||||| Sbjct: 509 ttagctcttgataccatccaacaagcatgtg 539 Score = 226 bits (114), Expect = 3e-55 Identities = 165/182 (90%) Strand = Plus / Plus Query: 740 tacaagctttgctgaagcacattgatttcgaagtggtccaatgtgttgtaattgcaagcc 799 |||| ||||| |||||||| |||||||| ||||| |||||||||| |||||||||||||| Sbjct: 2028 tacaggctttcctgaagcatattgattttgaagtagtccaatgtgctgtaattgcaagcc 2087 Query: 800 caggttttactaaggatcagtttcgtgattacatgcatcttgaagctgcacggcgagact 859 |||||||||||||||||||||| || ||||| |||||||||||||||||||||||||||| Sbjct: 2088 caggttttactaaggatcagttccgcgattatatgcatcttgaagctgcacggcgagact 2147 Query: 860 tgagagtaataattgagaataaatcacgcattattcttgcacatgcaccttcaggctaca 919 | ||| ||||||||||||| ||| |||||| |||||||||||||||||||||| |||| Sbjct: 2148 taagattaataattgagaacaaacagcgcattgttcttgcacatgcaccttcaggttaca 2207 Query: 920 ag 921 || Sbjct: 2208 ag 2209 Score = 210 bits (106), Expect = 2e-50 Identities = 250/298 (83%) Strand = Plus / Plus Query: 1269 tgaaggaagttttggacaccccaggtgtgatgtcactgataaaagatacaaaagcggcac 1328 |||||||||||||||| | |||| |||||||| |||| |||||||||||||| ||||| | Sbjct: 2217 tgaaggaagttttggatagcccaagtgtgatgacactaataaaagatacaaaggcggcgc 2276 Query: 1329 aggaggtgcaagctttgaaagagttcttcgctatgcttactaatgactcagcccgagcgt 1388 ||||||| ||||||||||| || |||||| |||||||| ||||| ||||| ||||| | Sbjct: 2277 aggaggtccaagctttgaaggacttcttcaacatgcttacaaatgattcagctcgagctt 2336 Query: 1389 gttatggacctaagcatgttgaggttgcacatgagcgccttgcaatacaaactcttctga 1448 ||||||||||||||||||||||| ||||| |||| || ||||| || ||||||||| | | Sbjct: 2337 gttatggacctaagcatgttgagattgcaaatgaacgtcttgctatccaaactcttttaa 2396 Query: 1449 tgacagatactttgtttcggaacacggacatcgttagcaggagaaagtatgtgaacttgg 1508 | ||||||| ||||||||||||| | ||||| | | ||| ||| |||||| ||||| Sbjct: 2397 taacagataatttgtttcggaactctgacattgcaacgaggcaaaattatgtgcgcttgg 2456 Query: 1509 ttgagtcagtcaagaaatatggtggtacagtgcacatattttcttcgatgcatgtctc 1566 |||| || || || |||| ||||| ||||||||||| |||||||| ||||||||||| Sbjct: 2457 ttgaatcggtaaaaaaattcggtggcacagtgcacatcttttcttcaatgcatgtctc 2514 Score = 105 bits (53), Expect = 7e-19 Identities = 68/73 (93%) Strand = Plus / Plus Query: 1848 ttggcgcagttgacaggaatagcagctatacttcgattccccctgccagatttggaggac 1907 |||||||||||||||||||| ||||||||||||||||| ||| |||||||||| |||||| Sbjct: 2525 ttggcgcagttgacaggaatcgcagctatacttcgatttcccttgccagatttagaggac 2584 Query: 1908 atcgagatgtgat 1920 || |||||||||| Sbjct: 2585 attgagatgtgat 2597 Score = 93.7 bits (47), Expect = 3e-15 Identities = 65/71 (91%) Strand = Plus / Plus Query: 565 actgcaagtgctgatctagcagttattcttatgcaagaaggacttgcccacttattcctt 624 ||||||||||||||||||||||||||||| ||||||||||||||||| || || ||||| Sbjct: 1494 actgcaagtgctgatctagcagttattctcatgcaagaaggacttgcacatttgttcctc 1553 Query: 625 attgggagaag 635 ||||| ||||| Sbjct: 1554 attggtagaag 1564 Score = 54.0 bits (27), Expect = 0.002 Identities = 60/71 (84%) Strand = Plus / Plus Query: 634 agcataacagcaacaaggtcacgcattgaaacatcgatccctaggaaacatggacctgcc 693 |||||||||| ||| || |||| ||||||||||| || ||| |||| ||||| ||||| Sbjct: 1762 agcataacagtaaccagagcacgtattgaaacatctattcctcggaagcatggccctgcg 1821 Query: 694 attgctggtta 704 ||||||||||| Sbjct: 1822 attgctggtta 1832 Score = 46.1 bits (23), Expect = 0.54 Identities = 29/31 (93%) Strand = Plus / Plus Query: 715 ctcaagaagttctttgagcatgttttacaag 745 ||||||||||||||||| |||||||| |||| Sbjct: 1921 ctcaagaagttctttgaacatgttttgcaag 1951
>gb|AY108442.1| Zea mays PCO132170 mRNA sequence Length = 580 Score = 198 bits (100), Expect = 6e-47 Identities = 259/312 (83%) Strand = Plus / Plus Query: 1261 gcatagtttgaaggaagttttggacaccccaggtgtgatgtcactgataaaagatacaaa 1320 ||||||||| ||||||||||||||||| |||||||||||| ||||||||||||||||||| Sbjct: 40 gcatagtttaaaggaagttttggacacaccaggtgtgatggcactgataaaagatacaaa 99 Query: 1321 agcggcacaggaggtgcaagctttgaaagagttcttcgctatgcttactaatgactcagc 1380 ||| ||||||||||| | |||| || | || |||||| ||||||||||||||| ||||| Sbjct: 100 agcagcacaggaggtccgagctctgcaggatttcttcaatatgcttactaatgagtcagc 159 Query: 1381 ccgagcgtgttatggacctaagcatgttgaggttgcacatgagcgccttgcaatacaaac 1440 || || ||||||||||| |||||||||||| |||||| | | |||| || || || Sbjct: 160 tcgtgcttgttatggaccgaagcatgttgagtttgcactgcaacagtttgctatccagac 219 Query: 1441 tcttctgatgacagatactttgtttcggaacacggacatcgttagcaggagaaagtatgt 1500 |||| | || || |||||||||||||||||| | ||||| | || ||| || ||| || Sbjct: 220 tcttttaataactgatactttgtttcggaacgctgacattgctacgaggcaaaggtacgt 279 Query: 1501 gaacttggttgagtcagtcaagaaatatggtggtacagtgcacatattttcttcgatgca 1560 ||| |||||||| ||||||||| || |||| ||||| ||||||||||| |||||||| Sbjct: 280 gaagttggttgaagatgtcaagaaaaatagtggcacagtacacatattttcctcgatgca 339 Query: 1561 tgtctccggcga 1572 |||||| ||||| Sbjct: 340 tgtctcgggcga 351 Score = 46.1 bits (23), Expect = 0.54 Identities = 32/35 (91%) Strand = Plus / Plus Query: 1848 ttggcgcagttgacaggaatagcagctatacttcg 1882 |||||||| ||||||||||||| ||||||||||| Sbjct: 356 ttggcgcaactgacaggaatagcggctatacttcg 390
>emb|CR855224.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSIGBa0132E09-OSIGBa0108L24, complete sequence Length = 130140 Score = 139 bits (70), Expect = 5e-29 Identities = 103/114 (90%) Strand = Plus / Plus Query: 812 aggatcagtttcgtgattacatgcatcttgaagctgcacggcgagacttgagagtaataa 871 |||||||||| || ||||| ||||||||||||||||||||||||||||| ||| |||||| Sbjct: 112434 aggatcagttccgcgattatatgcatcttgaagctgcacggcgagacttaagattaataa 112493 Query: 872 ttgagaataaatcacgcattattcttgcacatgcaccttcaggctacaagtaag 925 ||||||| ||| |||||| |||||||||||||||||||||| |||||||||| Sbjct: 112494 ttgagaacaaacagcgcattgttcttgcacatgcaccttcaggttacaagtaag 112547 Score = 113 bits (57), Expect = 3e-21 Identities = 102/117 (87%) Strand = Plus / Plus Query: 380 agtctgtagattatgacaaggaggggaatgttttgcgagtgcgtggcaaaaatattactg 439 |||||||||||||||| |||||||| ||| ||||| || ||||| |||||||| |||| Sbjct: 108835 agtctgtagattatgataaggagggatctgtcttgcgtgtacgtggaaaaaatatcactg 108894 Query: 440 agaatgatcacgtgaagattggccagtttcatactttagaacttgagctgaagagac 496 |||| ||||| ||||||||||| |||||||||||| | || |||||||||||||||| Sbjct: 108895 agaacgatcatgtgaagattggacagtttcatactatggagcttgagctgaagagac 108951 Score = 111 bits (56), Expect = 1e-20 Identities = 77/84 (91%) Strand = Plus / Plus Query: 1837 tttgtgcagaattggcgcagttgacaggaatagcagctatacttcgattccccctgccag 1896 |||| ||||| |||||||||||||||||||| ||||||||||||||||| ||| |||||| Sbjct: 114550 tttgagcagagttggcgcagttgacaggaatcgcagctatacttcgatttcccttgccag 114609 Query: 1897 atttggaggacatcgagatgtgat 1920 |||| |||||||| |||||||||| Sbjct: 114610 atttagaggacattgagatgtgat 114633 Score = 101 bits (51), Expect = 1e-17 Identities = 69/75 (92%) Strand = Plus / Plus Query: 740 tacaagctttgctgaagcacattgatttcgaagtggtccaatgtgttgtaattgcaagcc 799 |||| ||||| |||||||| |||||||| ||||| |||||||||| |||||||||||||| Sbjct: 112081 tacaggctttcctgaagcatattgattttgaagtagtccaatgtgctgtaattgcaagcc 112140 Query: 800 caggttttactaagg 814 ||||||||||||||| Sbjct: 112141 caggttttactaagg 112155 Score = 93.7 bits (47), Expect = 3e-15 Identities = 65/71 (91%) Strand = Plus / Plus Query: 565 actgcaagtgctgatctagcagttattcttatgcaagaaggacttgcccacttattcctt 624 ||||||||||||||||||||||||||||| ||||||||||||||||| || || ||||| Sbjct: 111547 actgcaagtgctgatctagcagttattctcatgcaagaaggacttgcacatttgttcctc 111606 Query: 625 attgggagaag 635 ||||| ||||| Sbjct: 111607 attggtagaag 111617 Score = 89.7 bits (45), Expect = 4e-14 Identities = 81/93 (87%) Strand = Plus / Plus Query: 1376 tcagcccgagcgtgttatggacctaagcatgttgaggttgcacatgagcgccttgcaata 1435 ||||| ||||| |||||||||||||||||||||||| ||||| |||| || ||||| || Sbjct: 113954 tcagctcgagcttgttatggacctaagcatgttgagattgcaaatgaacgtcttgctatc 114013 Query: 1436 caaactcttctgatgacagatactttgtttcgg 1468 ||||||||| | || ||||||| |||||||||| Sbjct: 114014 caaactcttttaataacagataatttgtttcgg 114046 Score = 81.8 bits (41), Expect = 1e-11 Identities = 68/77 (88%) Strand = Plus / Plus Query: 1259 aggcatagtttgaaggaagttttggacaccccaggtgtgatgtcactgataaaagataca 1318 |||||||| |||||||||||||||| | |||| |||||||| |||| |||||||||||| Sbjct: 113271 aggcatagcctgaaggaagttttggatagcccaagtgtgatgacactaataaaagataca 113330 Query: 1319 aaagcggcacaggaggt 1335 || ||||| |||||||| Sbjct: 113331 aaggcggcgcaggaggt 113347 Score = 73.8 bits (37), Expect = 2e-09 Identities = 40/41 (97%) Strand = Plus / Plus Query: 519 ttgggattggttagcacttgataccatccaacaagcatgtg 559 ||||||||||||||| ||||||||||||||||||||||||| Sbjct: 110553 ttgggattggttagctcttgataccatccaacaagcatgtg 110593 Score = 65.9 bits (33), Expect = 6e-07 Identities = 48/53 (90%) Strand = Plus / Plus Query: 170 cgatgaagctcgtccaccgcaatctcgcccgcaacgggcccggctccgccaag 222 |||||||||||||| ||||||| || ||||||||||| |||||||||| |||| Sbjct: 107204 cgatgaagctcgtctaccgcaacctggcccgcaacggccccggctccgtcaag 107256 Score = 61.9 bits (31), Expect = 9e-06 Identities = 40/43 (93%) Strand = Plus / Plus Query: 221 agctgctgccggaggaggaggacgacctgtggcacgcgtacaa 263 ||||| |||||||||||||||||||||||||||| || ||||| Sbjct: 107429 agctggtgccggaggaggaggacgacctgtggcatgcctacaa 107471 Score = 54.0 bits (27), Expect = 0.002 Identities = 60/71 (84%) Strand = Plus / Plus Query: 634 agcataacagcaacaaggtcacgcattgaaacatcgatccctaggaaacatggacctgcc 693 |||||||||| ||| || |||| ||||||||||| || ||| |||| ||||| ||||| Sbjct: 111815 agcataacagtaaccagagcacgtattgaaacatctattcctcggaagcatggccctgcg 111874 Query: 694 attgctggtta 704 ||||||||||| Sbjct: 111875 attgctggtta 111885 Score = 54.0 bits (27), Expect = 0.002 Identities = 54/63 (85%) Strand = Plus / Plus Query: 1504 cttggttgagtcagtcaagaaatatggtggtacagtgcacatattttcttcgatgcatgt 1563 ||||||||| || || || |||| ||||| ||||||||||| |||||||| |||||||| Sbjct: 114300 cttggttgaatcggtaaaaaaattcggtggcacagtgcacatcttttcttcaatgcatgt 114359 Query: 1564 ctc 1566 ||| Sbjct: 114360 ctc 114362 Score = 46.1 bits (23), Expect = 0.54 Identities = 29/31 (93%) Strand = Plus / Plus Query: 715 ctcaagaagttctttgagcatgttttacaag 745 ||||||||||||||||| |||||||| |||| Sbjct: 111974 ctcaagaagttctttgaacatgttttgcaag 112004 Score = 44.1 bits (22), Expect = 2.1 Identities = 43/50 (86%) Strand = Plus / Plus Query: 328 tctggtgggcgtgatgcggagcgcgtgaagctcaagttggaaattgtagt 377 ||||| || |||||||| ||||| |||| | | ||||||||||||||||| Sbjct: 108225 tctggaggacgtgatgctgagcgtgtgaggttaaagttggaaattgtagt 108274
>gb|AF480497.1| Oryza sativa clone BAC 24K23, complete sequence Length = 181577 Score = 139 bits (70), Expect = 5e-29 Identities = 103/114 (90%) Strand = Plus / Plus Query: 812 aggatcagtttcgtgattacatgcatcttgaagctgcacggcgagacttgagagtaataa 871 |||||||||| || ||||| ||||||||||||||||||||||||||||| ||| |||||| Sbjct: 135342 aggatcagttccgcgattatatgcatcttgaagctgcacggcgagacttaagattaataa 135401 Query: 872 ttgagaataaatcacgcattattcttgcacatgcaccttcaggctacaagtaag 925 ||||||| ||| |||||| |||||||||||||||||||||| |||||||||| Sbjct: 135402 ttgagaacaaacagcgcattgttcttgcacatgcaccttcaggttacaagtaag 135455 Score = 113 bits (57), Expect = 3e-21 Identities = 102/117 (87%) Strand = Plus / Plus Query: 380 agtctgtagattatgacaaggaggggaatgttttgcgagtgcgtggcaaaaatattactg 439 |||||||||||||||| |||||||| ||| ||||| || ||||| |||||||| |||| Sbjct: 131742 agtctgtagattatgataaggagggatctgtcttgcgtgtacgtggaaaaaatataactg 131801 Query: 440 agaatgatcacgtgaagattggccagtttcatactttagaacttgagctgaagagac 496 |||| ||||| ||||||||||| |||||||||||| | || |||||||||||||||| Sbjct: 131802 agaacgatcatgtgaagattggacagtttcatactgtggagcttgagctgaagagac 131858 Score = 111 bits (56), Expect = 1e-20 Identities = 77/84 (91%) Strand = Plus / Plus Query: 1837 tttgtgcagaattggcgcagttgacaggaatagcagctatacttcgattccccctgccag 1896 |||| ||||| |||||||||||||||||||| ||||||||||||||||| ||| |||||| Sbjct: 137457 tttgagcagagttggcgcagttgacaggaatcgcagctatacttcgatttcccttgccag 137516 Query: 1897 atttggaggacatcgagatgtgat 1920 |||| |||||||| |||||||||| Sbjct: 137517 atttagaggacattgagatgtgat 137540 Score = 101 bits (51), Expect = 1e-17 Identities = 69/75 (92%) Strand = Plus / Plus Query: 740 tacaagctttgctgaagcacattgatttcgaagtggtccaatgtgttgtaattgcaagcc 799 |||| ||||| |||||||| |||||||| ||||| |||||||||| |||||||||||||| Sbjct: 134989 tacaggctttcctgaagcatattgattttgaagtagtccaatgtgctgtaattgcaagcc 135048 Query: 800 caggttttactaagg 814 ||||||||||||||| Sbjct: 135049 caggttttactaagg 135063 Score = 93.7 bits (47), Expect = 3e-15 Identities = 65/71 (91%) Strand = Plus / Plus Query: 565 actgcaagtgctgatctagcagttattcttatgcaagaaggacttgcccacttattcctt 624 ||||||||||||||||||||||||||||| ||||||||||||||||| || || ||||| Sbjct: 134455 actgcaagtgctgatctagcagttattctcatgcaagaaggacttgcacatttgttcctc 134514 Query: 625 attgggagaag 635 ||||| ||||| Sbjct: 134515 attggtagaag 134525 Score = 89.7 bits (45), Expect = 4e-14 Identities = 81/93 (87%) Strand = Plus / Plus Query: 1376 tcagcccgagcgtgttatggacctaagcatgttgaggttgcacatgagcgccttgcaata 1435 ||||| ||||| |||||||||||||||||||||||| ||||| |||| || ||||| || Sbjct: 136860 tcagctcgagcttgttatggacctaagcatgttgagattgcaaatgaacgtcttgctatc 136919 Query: 1436 caaactcttctgatgacagatactttgtttcgg 1468 ||||||||| | || ||||||| |||||||||| Sbjct: 136920 caaactcttttaataacagataatttgtttcgg 136952 Score = 81.8 bits (41), Expect = 1e-11 Identities = 68/77 (88%) Strand = Plus / Plus Query: 1259 aggcatagtttgaaggaagttttggacaccccaggtgtgatgtcactgataaaagataca 1318 |||||||| |||||||||||||||| | |||| |||||||| |||| |||||||||||| Sbjct: 136178 aggcatagcctgaaggaagttttggatagcccaagtgtgatgacactaataaaagataca 136237 Query: 1319 aaagcggcacaggaggt 1335 || ||||| |||||||| Sbjct: 136238 aaggcggcgcaggaggt 136254 Score = 73.8 bits (37), Expect = 2e-09 Identities = 49/53 (92%) Strand = Plus / Plus Query: 170 cgatgaagctcgtccaccgcaatctcgcccgcaacgggcccggctccgccaag 222 |||||||||||||| ||||||| |||||||||||||| |||||||||| |||| Sbjct: 130163 cgatgaagctcgtctaccgcaacctcgcccgcaacggccccggctccgtcaag 130215 Score = 73.8 bits (37), Expect = 2e-09 Identities = 40/41 (97%) Strand = Plus / Plus Query: 519 ttgggattggttagcacttgataccatccaacaagcatgtg 559 ||||||||||||||| ||||||||||||||||||||||||| Sbjct: 133460 ttgggattggttagctcttgataccatccaacaagcatgtg 133500 Score = 61.9 bits (31), Expect = 9e-06 Identities = 40/43 (93%) Strand = Plus / Plus Query: 221 agctgctgccggaggaggaggacgacctgtggcacgcgtacaa 263 ||||| |||||||||||||||||||||||||||| || ||||| Sbjct: 130378 agctggtgccggaggaggaggacgacctgtggcatgcctacaa 130420 Score = 54.0 bits (27), Expect = 0.002 Identities = 60/71 (84%) Strand = Plus / Plus Query: 634 agcataacagcaacaaggtcacgcattgaaacatcgatccctaggaaacatggacctgcc 693 |||||||||| ||| || |||| ||||||||||| || ||| |||| ||||| ||||| Sbjct: 134723 agcataacagtaaccagagcacgtattgaaacatctattcctcggaagcatggccctgcg 134782 Query: 694 attgctggtta 704 ||||||||||| Sbjct: 134783 attgctggtta 134793 Score = 54.0 bits (27), Expect = 0.002 Identities = 54/63 (85%) Strand = Plus / Plus Query: 1504 cttggttgagtcagtcaagaaatatggtggtacagtgcacatattttcttcgatgcatgt 1563 ||||||||| || || || |||| ||||| ||||||||||| |||||||| |||||||| Sbjct: 137206 cttggttgaatcggtaaaaaaattcggtggcacagtgcacatcttttcttcaatgcatgt 137265 Query: 1564 ctc 1566 ||| Sbjct: 137266 ctc 137268 Score = 46.1 bits (23), Expect = 0.54 Identities = 29/31 (93%) Strand = Plus / Plus Query: 715 ctcaagaagttctttgagcatgttttacaag 745 ||||||||||||||||| |||||||| |||| Sbjct: 134882 ctcaagaagttctttgaacatgttttgcaag 134912 Score = 44.1 bits (22), Expect = 2.1 Identities = 43/50 (86%) Strand = Plus / Plus Query: 328 tctggtgggcgtgatgcggagcgcgtgaagctcaagttggaaattgtagt 377 ||||| || |||||||| ||||| |||| | | ||||||||||||||||| Sbjct: 131132 tctggaggacgtgatgctgagcgtgtgaggttaaagttggaaattgtagt 131181
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 139 bits (70), Expect = 5e-29 Identities = 103/114 (90%) Strand = Plus / Plus Query: 812 aggatcagtttcgtgattacatgcatcttgaagctgcacggcgagacttgagagtaataa 871 |||||||||| || ||||| ||||||||||||||||||||||||||||| ||| |||||| Sbjct: 33704164 aggatcagttccgcgattatatgcatcttgaagctgcacggcgagacttaagattaataa 33704223 Query: 872 ttgagaataaatcacgcattattcttgcacatgcaccttcaggctacaagtaag 925 ||||||| ||| |||||| |||||||||||||||||||||| |||||||||| Sbjct: 33704224 ttgagaacaaacagcgcattgttcttgcacatgcaccttcaggttacaagtaag 33704277 Score = 113 bits (57), Expect = 3e-21 Identities = 102/117 (87%) Strand = Plus / Plus Query: 380 agtctgtagattatgacaaggaggggaatgttttgcgagtgcgtggcaaaaatattactg 439 |||||||||||||||| |||||||| ||| ||||| || ||||| |||||||| |||| Sbjct: 33700564 agtctgtagattatgataaggagggatctgtcttgcgtgtacgtggaaaaaatataactg 33700623 Query: 440 agaatgatcacgtgaagattggccagtttcatactttagaacttgagctgaagagac 496 |||| ||||| ||||||||||| |||||||||||| | || |||||||||||||||| Sbjct: 33700624 agaacgatcatgtgaagattggacagtttcatactgtggagcttgagctgaagagac 33700680 Score = 111 bits (56), Expect = 1e-20 Identities = 77/84 (91%) Strand = Plus / Plus Query: 1837 tttgtgcagaattggcgcagttgacaggaatagcagctatacttcgattccccctgccag 1896 |||| ||||| |||||||||||||||||||| ||||||||||||||||| ||| |||||| Sbjct: 33706279 tttgagcagagttggcgcagttgacaggaatcgcagctatacttcgatttcccttgccag 33706338 Query: 1897 atttggaggacatcgagatgtgat 1920 |||| |||||||| |||||||||| Sbjct: 33706339 atttagaggacattgagatgtgat 33706362 Score = 101 bits (51), Expect = 1e-17 Identities = 69/75 (92%) Strand = Plus / Plus Query: 740 tacaagctttgctgaagcacattgatttcgaagtggtccaatgtgttgtaattgcaagcc 799 |||| ||||| |||||||| |||||||| ||||| |||||||||| |||||||||||||| Sbjct: 33703811 tacaggctttcctgaagcatattgattttgaagtagtccaatgtgctgtaattgcaagcc 33703870 Query: 800 caggttttactaagg 814 ||||||||||||||| Sbjct: 33703871 caggttttactaagg 33703885 Score = 93.7 bits (47), Expect = 3e-15 Identities = 65/71 (91%) Strand = Plus / Plus Query: 565 actgcaagtgctgatctagcagttattcttatgcaagaaggacttgcccacttattcctt 624 ||||||||||||||||||||||||||||| ||||||||||||||||| || || ||||| Sbjct: 33703277 actgcaagtgctgatctagcagttattctcatgcaagaaggacttgcacatttgttcctc 33703336 Query: 625 attgggagaag 635 ||||| ||||| Sbjct: 33703337 attggtagaag 33703347 Score = 89.7 bits (45), Expect = 4e-14 Identities = 81/93 (87%) Strand = Plus / Plus Query: 1376 tcagcccgagcgtgttatggacctaagcatgttgaggttgcacatgagcgccttgcaata 1435 ||||| ||||| |||||||||||||||||||||||| ||||| |||| || ||||| || Sbjct: 33705682 tcagctcgagcttgttatggacctaagcatgttgagattgcaaatgaacgtcttgctatc 33705741 Query: 1436 caaactcttctgatgacagatactttgtttcgg 1468 ||||||||| | || ||||||| |||||||||| Sbjct: 33705742 caaactcttttaataacagataatttgtttcgg 33705774 Score = 81.8 bits (41), Expect = 1e-11 Identities = 68/77 (88%) Strand = Plus / Plus Query: 1259 aggcatagtttgaaggaagttttggacaccccaggtgtgatgtcactgataaaagataca 1318 |||||||| |||||||||||||||| | |||| |||||||| |||| |||||||||||| Sbjct: 33705000 aggcatagcctgaaggaagttttggatagcccaagtgtgatgacactaataaaagataca 33705059 Query: 1319 aaagcggcacaggaggt 1335 || ||||| |||||||| Sbjct: 33705060 aaggcggcgcaggaggt 33705076 Score = 73.8 bits (37), Expect = 2e-09 Identities = 49/53 (92%) Strand = Plus / Plus Query: 170 cgatgaagctcgtccaccgcaatctcgcccgcaacgggcccggctccgccaag 222 |||||||||||||| ||||||| |||||||||||||| |||||||||| |||| Sbjct: 33698985 cgatgaagctcgtctaccgcaacctcgcccgcaacggccccggctccgtcaag 33699037 Score = 73.8 bits (37), Expect = 2e-09 Identities = 40/41 (97%) Strand = Plus / Plus Query: 519 ttgggattggttagcacttgataccatccaacaagcatgtg 559 ||||||||||||||| ||||||||||||||||||||||||| Sbjct: 33702282 ttgggattggttagctcttgataccatccaacaagcatgtg 33702322 Score = 61.9 bits (31), Expect = 9e-06 Identities = 40/43 (93%) Strand = Plus / Plus Query: 221 agctgctgccggaggaggaggacgacctgtggcacgcgtacaa 263 ||||| |||||||||||||||||||||||||||| || ||||| Sbjct: 33699200 agctggtgccggaggaggaggacgacctgtggcatgcctacaa 33699242 Score = 54.0 bits (27), Expect = 0.002 Identities = 60/71 (84%) Strand = Plus / Plus Query: 634 agcataacagcaacaaggtcacgcattgaaacatcgatccctaggaaacatggacctgcc 693 |||||||||| ||| || |||| ||||||||||| || ||| |||| ||||| ||||| Sbjct: 33703545 agcataacagtaaccagagcacgtattgaaacatctattcctcggaagcatggccctgcg 33703604 Query: 694 attgctggtta 704 ||||||||||| Sbjct: 33703605 attgctggtta 33703615 Score = 54.0 bits (27), Expect = 0.002 Identities = 54/63 (85%) Strand = Plus / Plus Query: 1504 cttggttgagtcagtcaagaaatatggtggtacagtgcacatattttcttcgatgcatgt 1563 ||||||||| || || || |||| ||||| ||||||||||| |||||||| |||||||| Sbjct: 33706028 cttggttgaatcggtaaaaaaattcggtggcacagtgcacatcttttcttcaatgcatgt 33706087 Query: 1564 ctc 1566 ||| Sbjct: 33706088 ctc 33706090 Score = 46.1 bits (23), Expect = 0.54 Identities = 29/31 (93%) Strand = Plus / Plus Query: 715 ctcaagaagttctttgagcatgttttacaag 745 ||||||||||||||||| |||||||| |||| Sbjct: 33703704 ctcaagaagttctttgaacatgttttgcaag 33703734 Score = 44.1 bits (22), Expect = 2.1 Identities = 43/50 (86%) Strand = Plus / Plus Query: 328 tctggtgggcgtgatgcggagcgcgtgaagctcaagttggaaattgtagt 377 ||||| || |||||||| ||||| |||| | | ||||||||||||||||| Sbjct: 33699954 tctggaggacgtgatgctgagcgtgtgaggttaaagttggaaattgtagt 33700003
>emb|AL662953.3|OSJN00153 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0011F23, complete sequence Length = 149353 Score = 139 bits (70), Expect = 5e-29 Identities = 103/114 (90%) Strand = Plus / Plus Query: 812 aggatcagtttcgtgattacatgcatcttgaagctgcacggcgagacttgagagtaataa 871 |||||||||| || ||||| ||||||||||||||||||||||||||||| ||| |||||| Sbjct: 135224 aggatcagttccgcgattatatgcatcttgaagctgcacggcgagacttaagattaataa 135283 Query: 872 ttgagaataaatcacgcattattcttgcacatgcaccttcaggctacaagtaag 925 ||||||| ||| |||||| |||||||||||||||||||||| |||||||||| Sbjct: 135284 ttgagaacaaacagcgcattgttcttgcacatgcaccttcaggttacaagtaag 135337 Score = 113 bits (57), Expect = 3e-21 Identities = 102/117 (87%) Strand = Plus / Plus Query: 380 agtctgtagattatgacaaggaggggaatgttttgcgagtgcgtggcaaaaatattactg 439 |||||||||||||||| |||||||| ||| ||||| || ||||| |||||||| |||| Sbjct: 131624 agtctgtagattatgataaggagggatctgtcttgcgtgtacgtggaaaaaatataactg 131683 Query: 440 agaatgatcacgtgaagattggccagtttcatactttagaacttgagctgaagagac 496 |||| ||||| ||||||||||| |||||||||||| | || |||||||||||||||| Sbjct: 131684 agaacgatcatgtgaagattggacagtttcatactgtggagcttgagctgaagagac 131740 Score = 111 bits (56), Expect = 1e-20 Identities = 77/84 (91%) Strand = Plus / Plus Query: 1837 tttgtgcagaattggcgcagttgacaggaatagcagctatacttcgattccccctgccag 1896 |||| ||||| |||||||||||||||||||| ||||||||||||||||| ||| |||||| Sbjct: 137339 tttgagcagagttggcgcagttgacaggaatcgcagctatacttcgatttcccttgccag 137398 Query: 1897 atttggaggacatcgagatgtgat 1920 |||| |||||||| |||||||||| Sbjct: 137399 atttagaggacattgagatgtgat 137422 Score = 101 bits (51), Expect = 1e-17 Identities = 69/75 (92%) Strand = Plus / Plus Query: 740 tacaagctttgctgaagcacattgatttcgaagtggtccaatgtgttgtaattgcaagcc 799 |||| ||||| |||||||| |||||||| ||||| |||||||||| |||||||||||||| Sbjct: 134871 tacaggctttcctgaagcatattgattttgaagtagtccaatgtgctgtaattgcaagcc 134930 Query: 800 caggttttactaagg 814 ||||||||||||||| Sbjct: 134931 caggttttactaagg 134945 Score = 93.7 bits (47), Expect = 3e-15 Identities = 65/71 (91%) Strand = Plus / Plus Query: 565 actgcaagtgctgatctagcagttattcttatgcaagaaggacttgcccacttattcctt 624 ||||||||||||||||||||||||||||| ||||||||||||||||| || || ||||| Sbjct: 134337 actgcaagtgctgatctagcagttattctcatgcaagaaggacttgcacatttgttcctc 134396 Query: 625 attgggagaag 635 ||||| ||||| Sbjct: 134397 attggtagaag 134407 Score = 89.7 bits (45), Expect = 4e-14 Identities = 81/93 (87%) Strand = Plus / Plus Query: 1376 tcagcccgagcgtgttatggacctaagcatgttgaggttgcacatgagcgccttgcaata 1435 ||||| ||||| |||||||||||||||||||||||| ||||| |||| || ||||| || Sbjct: 136742 tcagctcgagcttgttatggacctaagcatgttgagattgcaaatgaacgtcttgctatc 136801 Query: 1436 caaactcttctgatgacagatactttgtttcgg 1468 ||||||||| | || ||||||| |||||||||| Sbjct: 136802 caaactcttttaataacagataatttgtttcgg 136834 Score = 81.8 bits (41), Expect = 1e-11 Identities = 68/77 (88%) Strand = Plus / Plus Query: 1259 aggcatagtttgaaggaagttttggacaccccaggtgtgatgtcactgataaaagataca 1318 |||||||| |||||||||||||||| | |||| |||||||| |||| |||||||||||| Sbjct: 136060 aggcatagcctgaaggaagttttggatagcccaagtgtgatgacactaataaaagataca 136119 Query: 1319 aaagcggcacaggaggt 1335 || ||||| |||||||| Sbjct: 136120 aaggcggcgcaggaggt 136136 Score = 73.8 bits (37), Expect = 2e-09 Identities = 49/53 (92%) Strand = Plus / Plus Query: 170 cgatgaagctcgtccaccgcaatctcgcccgcaacgggcccggctccgccaag 222 |||||||||||||| ||||||| |||||||||||||| |||||||||| |||| Sbjct: 130045 cgatgaagctcgtctaccgcaacctcgcccgcaacggccccggctccgtcaag 130097 Score = 73.8 bits (37), Expect = 2e-09 Identities = 40/41 (97%) Strand = Plus / Plus Query: 519 ttgggattggttagcacttgataccatccaacaagcatgtg 559 ||||||||||||||| ||||||||||||||||||||||||| Sbjct: 133342 ttgggattggttagctcttgataccatccaacaagcatgtg 133382 Score = 61.9 bits (31), Expect = 9e-06 Identities = 40/43 (93%) Strand = Plus / Plus Query: 221 agctgctgccggaggaggaggacgacctgtggcacgcgtacaa 263 ||||| |||||||||||||||||||||||||||| || ||||| Sbjct: 130260 agctggtgccggaggaggaggacgacctgtggcatgcctacaa 130302 Score = 54.0 bits (27), Expect = 0.002 Identities = 60/71 (84%) Strand = Plus / Plus Query: 634 agcataacagcaacaaggtcacgcattgaaacatcgatccctaggaaacatggacctgcc 693 |||||||||| ||| || |||| ||||||||||| || ||| |||| ||||| ||||| Sbjct: 134605 agcataacagtaaccagagcacgtattgaaacatctattcctcggaagcatggccctgcg 134664 Query: 694 attgctggtta 704 ||||||||||| Sbjct: 134665 attgctggtta 134675 Score = 54.0 bits (27), Expect = 0.002 Identities = 54/63 (85%) Strand = Plus / Plus Query: 1504 cttggttgagtcagtcaagaaatatggtggtacagtgcacatattttcttcgatgcatgt 1563 ||||||||| || || || |||| ||||| ||||||||||| |||||||| |||||||| Sbjct: 137088 cttggttgaatcggtaaaaaaattcggtggcacagtgcacatcttttcttcaatgcatgt 137147 Query: 1564 ctc 1566 ||| Sbjct: 137148 ctc 137150 Score = 46.1 bits (23), Expect = 0.54 Identities = 29/31 (93%) Strand = Plus / Plus Query: 715 ctcaagaagttctttgagcatgttttacaag 745 ||||||||||||||||| |||||||| |||| Sbjct: 134764 ctcaagaagttctttgaacatgttttgcaag 134794 Score = 44.1 bits (22), Expect = 2.1 Identities = 43/50 (86%) Strand = Plus / Plus Query: 328 tctggtgggcgtgatgcggagcgcgtgaagctcaagttggaaattgtagt 377 ||||| || |||||||| ||||| |||| | | ||||||||||||||||| Sbjct: 131014 tctggaggacgtgatgctgagcgtgtgaggttaaagttggaaattgtagt 131063
>emb|AL606608.3|OSJN00056 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0015K02, complete sequence Length = 153623 Score = 139 bits (70), Expect = 5e-29 Identities = 103/114 (90%) Strand = Plus / Plus Query: 812 aggatcagtttcgtgattacatgcatcttgaagctgcacggcgagacttgagagtaataa 871 |||||||||| || ||||| ||||||||||||||||||||||||||||| ||| |||||| Sbjct: 54607 aggatcagttccgcgattatatgcatcttgaagctgcacggcgagacttaagattaataa 54666 Query: 872 ttgagaataaatcacgcattattcttgcacatgcaccttcaggctacaagtaag 925 ||||||| ||| |||||| |||||||||||||||||||||| |||||||||| Sbjct: 54667 ttgagaacaaacagcgcattgttcttgcacatgcaccttcaggttacaagtaag 54720 Score = 113 bits (57), Expect = 3e-21 Identities = 102/117 (87%) Strand = Plus / Plus Query: 380 agtctgtagattatgacaaggaggggaatgttttgcgagtgcgtggcaaaaatattactg 439 |||||||||||||||| |||||||| ||| ||||| || ||||| |||||||| |||| Sbjct: 51007 agtctgtagattatgataaggagggatctgtcttgcgtgtacgtggaaaaaatataactg 51066 Query: 440 agaatgatcacgtgaagattggccagtttcatactttagaacttgagctgaagagac 496 |||| ||||| ||||||||||| |||||||||||| | || |||||||||||||||| Sbjct: 51067 agaacgatcatgtgaagattggacagtttcatactgtggagcttgagctgaagagac 51123 Score = 111 bits (56), Expect = 1e-20 Identities = 77/84 (91%) Strand = Plus / Plus Query: 1837 tttgtgcagaattggcgcagttgacaggaatagcagctatacttcgattccccctgccag 1896 |||| ||||| |||||||||||||||||||| ||||||||||||||||| ||| |||||| Sbjct: 56722 tttgagcagagttggcgcagttgacaggaatcgcagctatacttcgatttcccttgccag 56781 Query: 1897 atttggaggacatcgagatgtgat 1920 |||| |||||||| |||||||||| Sbjct: 56782 atttagaggacattgagatgtgat 56805 Score = 101 bits (51), Expect = 1e-17 Identities = 69/75 (92%) Strand = Plus / Plus Query: 740 tacaagctttgctgaagcacattgatttcgaagtggtccaatgtgttgtaattgcaagcc 799 |||| ||||| |||||||| |||||||| ||||| |||||||||| |||||||||||||| Sbjct: 54254 tacaggctttcctgaagcatattgattttgaagtagtccaatgtgctgtaattgcaagcc 54313 Query: 800 caggttttactaagg 814 ||||||||||||||| Sbjct: 54314 caggttttactaagg 54328 Score = 93.7 bits (47), Expect = 3e-15 Identities = 65/71 (91%) Strand = Plus / Plus Query: 565 actgcaagtgctgatctagcagttattcttatgcaagaaggacttgcccacttattcctt 624 ||||||||||||||||||||||||||||| ||||||||||||||||| || || ||||| Sbjct: 53720 actgcaagtgctgatctagcagttattctcatgcaagaaggacttgcacatttgttcctc 53779 Query: 625 attgggagaag 635 ||||| ||||| Sbjct: 53780 attggtagaag 53790 Score = 89.7 bits (45), Expect = 4e-14 Identities = 81/93 (87%) Strand = Plus / Plus Query: 1376 tcagcccgagcgtgttatggacctaagcatgttgaggttgcacatgagcgccttgcaata 1435 ||||| ||||| |||||||||||||||||||||||| ||||| |||| || ||||| || Sbjct: 56125 tcagctcgagcttgttatggacctaagcatgttgagattgcaaatgaacgtcttgctatc 56184 Query: 1436 caaactcttctgatgacagatactttgtttcgg 1468 ||||||||| | || ||||||| |||||||||| Sbjct: 56185 caaactcttttaataacagataatttgtttcgg 56217 Score = 81.8 bits (41), Expect = 1e-11 Identities = 68/77 (88%) Strand = Plus / Plus Query: 1259 aggcatagtttgaaggaagttttggacaccccaggtgtgatgtcactgataaaagataca 1318 |||||||| |||||||||||||||| | |||| |||||||| |||| |||||||||||| Sbjct: 55443 aggcatagcctgaaggaagttttggatagcccaagtgtgatgacactaataaaagataca 55502 Query: 1319 aaagcggcacaggaggt 1335 || ||||| |||||||| Sbjct: 55503 aaggcggcgcaggaggt 55519 Score = 73.8 bits (37), Expect = 2e-09 Identities = 49/53 (92%) Strand = Plus / Plus Query: 170 cgatgaagctcgtccaccgcaatctcgcccgcaacgggcccggctccgccaag 222 |||||||||||||| ||||||| |||||||||||||| |||||||||| |||| Sbjct: 49428 cgatgaagctcgtctaccgcaacctcgcccgcaacggccccggctccgtcaag 49480 Score = 73.8 bits (37), Expect = 2e-09 Identities = 40/41 (97%) Strand = Plus / Plus Query: 519 ttgggattggttagcacttgataccatccaacaagcatgtg 559 ||||||||||||||| ||||||||||||||||||||||||| Sbjct: 52725 ttgggattggttagctcttgataccatccaacaagcatgtg 52765 Score = 61.9 bits (31), Expect = 9e-06 Identities = 40/43 (93%) Strand = Plus / Plus Query: 221 agctgctgccggaggaggaggacgacctgtggcacgcgtacaa 263 ||||| |||||||||||||||||||||||||||| || ||||| Sbjct: 49643 agctggtgccggaggaggaggacgacctgtggcatgcctacaa 49685 Score = 54.0 bits (27), Expect = 0.002 Identities = 60/71 (84%) Strand = Plus / Plus Query: 634 agcataacagcaacaaggtcacgcattgaaacatcgatccctaggaaacatggacctgcc 693 |||||||||| ||| || |||| ||||||||||| || ||| |||| ||||| ||||| Sbjct: 53988 agcataacagtaaccagagcacgtattgaaacatctattcctcggaagcatggccctgcg 54047 Query: 694 attgctggtta 704 ||||||||||| Sbjct: 54048 attgctggtta 54058 Score = 54.0 bits (27), Expect = 0.002 Identities = 54/63 (85%) Strand = Plus / Plus Query: 1504 cttggttgagtcagtcaagaaatatggtggtacagtgcacatattttcttcgatgcatgt 1563 ||||||||| || || || |||| ||||| ||||||||||| |||||||| |||||||| Sbjct: 56471 cttggttgaatcggtaaaaaaattcggtggcacagtgcacatcttttcttcaatgcatgt 56530 Query: 1564 ctc 1566 ||| Sbjct: 56531 ctc 56533 Score = 46.1 bits (23), Expect = 0.54 Identities = 29/31 (93%) Strand = Plus / Plus Query: 715 ctcaagaagttctttgagcatgttttacaag 745 ||||||||||||||||| |||||||| |||| Sbjct: 54147 ctcaagaagttctttgaacatgttttgcaag 54177 Score = 44.1 bits (22), Expect = 2.1 Identities = 43/50 (86%) Strand = Plus / Plus Query: 328 tctggtgggcgtgatgcggagcgcgtgaagctcaagttggaaattgtagt 377 ||||| || |||||||| ||||| |||| | | ||||||||||||||||| Sbjct: 50397 tctggaggacgtgatgctgagcgtgtgaggttaaagttggaaattgtagt 50446
>ref|NM_118901.4| Arabidopsis thaliana PEL1 (PELOTA); translation release factor (PEL1) mRNA, complete cds Length = 1509 Score = 67.9 bits (34), Expect = 1e-07 Identities = 67/78 (85%) Strand = Plus / Plus Query: 661 gaaacatcgatccctaggaaacatggacctgccattgctggttacgaatcggctctcaag 720 |||||||| || |||||||| ||||||||||| |||||||||||||| || ||| | ||| Sbjct: 700 gaaacatccattcctaggaagcatggacctgcaattgctggttacgagtctgctttgaag 759 Query: 721 aagttctttgagcatgtt 738 || || |||||| ||||| Sbjct: 760 aaattttttgagaatgtt 777 Score = 56.0 bits (28), Expect = 6e-04 Identities = 79/96 (82%) Strand = Plus / Plus Query: 408 tgttttgcgagtgcgtggcaaaaatattactgagaatgatcacgtgaagattggccagtt 467 ||||||||| | |||||||||||||| |||||||| ||||| |||||||| || Sbjct: 447 tgttttgcgcatacgtggcaaaaatatcctggagaatgagcacgtaaagattggtgcatt 506 Query: 468 tcatactttagaacttgagctgaagagaccttttgt 503 |||||||| |||||||||||||| |||||||||| Sbjct: 507 ccatactttggaacttgagctgaaacgaccttttgt 542 Score = 46.1 bits (23), Expect = 0.54 Identities = 38/43 (88%) Strand = Plus / Plus Query: 566 ctgcaagtgctgatctagcagttattcttatgcaagaaggact 608 |||| |||||||||||||| || |||| |||||||||||||| Sbjct: 605 ctgctagtgctgatctagctgtagttctaatgcaagaaggact 647
>gb|AY096569.1| Arabidopsis thaliana putative pelota protein (PEL1) (At4g27650) mRNA, complete cds Length = 1168 Score = 67.9 bits (34), Expect = 1e-07 Identities = 67/78 (85%) Strand = Plus / Plus Query: 661 gaaacatcgatccctaggaaacatggacctgccattgctggttacgaatcggctctcaag 720 |||||||| || |||||||| ||||||||||| |||||||||||||| || ||| | ||| Sbjct: 490 gaaacatccattcctaggaagcatggacctgcaattgctggttacgagtctgctttgaag 549 Query: 721 aagttctttgagcatgtt 738 || || |||||| ||||| Sbjct: 550 aaattttttgagaatgtt 567 Score = 56.0 bits (28), Expect = 6e-04 Identities = 79/96 (82%) Strand = Plus / Plus Query: 408 tgttttgcgagtgcgtggcaaaaatattactgagaatgatcacgtgaagattggccagtt 467 ||||||||| | |||||||||||||| |||||||| ||||| |||||||| || Sbjct: 237 tgttttgcgcatacgtggcaaaaatatcctggagaatgagcacgtaaagattggtgcatt 296 Query: 468 tcatactttagaacttgagctgaagagaccttttgt 503 |||||||| |||||||||||||| |||||||||| Sbjct: 297 ccatactttggaacttgagctgaaacgaccttttgt 332 Score = 46.1 bits (23), Expect = 0.54 Identities = 38/43 (88%) Strand = Plus / Plus Query: 566 ctgcaagtgctgatctagcagttattcttatgcaagaaggact 608 |||| |||||||||||||| || |||| |||||||||||||| Sbjct: 395 ctgctagtgctgatctagctgtagttctaatgcaagaaggact 437
>gb|AY074298.1| Arabidopsis thaliana putative pelota (PEL1) protein (At4g27650) mRNA, complete cds Length = 1494 Score = 67.9 bits (34), Expect = 1e-07 Identities = 67/78 (85%) Strand = Plus / Plus Query: 661 gaaacatcgatccctaggaaacatggacctgccattgctggttacgaatcggctctcaag 720 |||||||| || |||||||| ||||||||||| |||||||||||||| || ||| | ||| Sbjct: 670 gaaacatccattcctaggaagcatggacctgcaattgctggttacgagtctgctttgaag 729 Query: 721 aagttctttgagcatgtt 738 || || |||||| ||||| Sbjct: 730 aaattttttgagaatgtt 747 Score = 56.0 bits (28), Expect = 6e-04 Identities = 79/96 (82%) Strand = Plus / Plus Query: 408 tgttttgcgagtgcgtggcaaaaatattactgagaatgatcacgtgaagattggccagtt 467 ||||||||| | |||||||||||||| |||||||| ||||| |||||||| || Sbjct: 417 tgttttgcgcatacgtggcaaaaatatcctggagaatgagcacgtaaagattggtgcatt 476 Query: 468 tcatactttagaacttgagctgaagagaccttttgt 503 |||||||| |||||||||||||| |||||||||| Sbjct: 477 ccatactttggaacttgagctgaaacgaccttttgt 512 Score = 46.1 bits (23), Expect = 0.54 Identities = 38/43 (88%) Strand = Plus / Plus Query: 566 ctgcaagtgctgatctagcagttattcttatgcaagaaggact 608 |||| |||||||||||||| || |||| |||||||||||||| Sbjct: 575 ctgctagtgctgatctagctgtagttctaatgcaagaaggact 617
>gb|AF325048.2|AF325048 Arabidopsis thaliana AT4g27650 (AT4g27650/T29A15_140) mRNA, complete cds Length = 1436 Score = 67.9 bits (34), Expect = 1e-07 Identities = 67/78 (85%) Strand = Plus / Plus Query: 661 gaaacatcgatccctaggaaacatggacctgccattgctggttacgaatcggctctcaag 720 |||||||| || |||||||| ||||||||||| |||||||||||||| || ||| | ||| Sbjct: 540 gaaacatccattcctaggaagcatggacctgcaattgctggttacgagtctgctttgaag 599 Query: 721 aagttctttgagcatgtt 738 || || |||||| ||||| Sbjct: 600 aaattttttgagaatgtt 617 Score = 56.0 bits (28), Expect = 6e-04 Identities = 79/96 (82%) Strand = Plus / Plus Query: 408 tgttttgcgagtgcgtggcaaaaatattactgagaatgatcacgtgaagattggccagtt 467 ||||||||| | |||||||||||||| |||||||| ||||| |||||||| || Sbjct: 287 tgttttgcgcatacgtggcaaaaatatcctggagaatgagcacgtaaagattggtgcatt 346 Query: 468 tcatactttagaacttgagctgaagagaccttttgt 503 |||||||| |||||||||||||| |||||||||| Sbjct: 347 ccatactttggaacttgagctgaaacgaccttttgt 382 Score = 46.1 bits (23), Expect = 0.54 Identities = 38/43 (88%) Strand = Plus / Plus Query: 566 ctgcaagtgctgatctagcagttattcttatgcaagaaggact 608 |||| |||||||||||||| || |||| |||||||||||||| Sbjct: 445 ctgctagtgctgatctagctgtagttctaatgcaagaaggact 487
>emb|BX827139.1|CNS0A3ML Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS14ZC01 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1428 Score = 67.9 bits (34), Expect = 1e-07 Identities = 67/78 (85%) Strand = Plus / Plus Query: 661 gaaacatcgatccctaggaaacatggacctgccattgctggttacgaatcggctctcaag 720 |||||||| || |||||||| ||||||||||| |||||||||||||| || ||| | ||| Sbjct: 700 gaaacatccattcctaggaagcatggacctgcaattgctggttacgagtctgctttgaag 759 Query: 721 aagttctttgagcatgtt 738 || || |||||| ||||| Sbjct: 760 aaattttttgagaatgtt 777 Score = 56.0 bits (28), Expect = 6e-04 Identities = 79/96 (82%) Strand = Plus / Plus Query: 408 tgttttgcgagtgcgtggcaaaaatattactgagaatgatcacgtgaagattggccagtt 467 ||||||||| | |||||||||||||| |||||||| ||||| |||||||| || Sbjct: 447 tgttttgcgcatacgtggcaaaaatatcctggagaatgagcacgtaaagattggtgcatt 506 Query: 468 tcatactttagaacttgagctgaagagaccttttgt 503 |||||||| |||||||||||||| |||||||||| Sbjct: 507 ccatactttggaacttgagctgaaacgaccttttgt 542 Score = 46.1 bits (23), Expect = 0.54 Identities = 38/43 (88%) Strand = Plus / Plus Query: 566 ctgcaagtgctgatctagcagttattcttatgcaagaaggact 608 |||| |||||||||||||| || |||| |||||||||||||| Sbjct: 605 ctgctagtgctgatctagctgtagttctaatgcaagaaggact 647
>gb|AF069497.1|AF069497 Arabidopsis thaliana pelota (PEL1) mRNA, complete cds Length = 1498 Score = 67.9 bits (34), Expect = 1e-07 Identities = 67/78 (85%) Strand = Plus / Plus Query: 661 gaaacatcgatccctaggaaacatggacctgccattgctggttacgaatcggctctcaag 720 |||||||| || |||||||| ||||||||||| |||||||||||||| || ||| | ||| Sbjct: 691 gaaacatccattcctaggaagcatggacctgcaattgctggttacgagtctgctttgaag 750 Query: 721 aagttctttgagcatgtt 738 || || |||||| ||||| Sbjct: 751 aaattttttgagaatgtt 768 Score = 56.0 bits (28), Expect = 6e-04 Identities = 79/96 (82%) Strand = Plus / Plus Query: 408 tgttttgcgagtgcgtggcaaaaatattactgagaatgatcacgtgaagattggccagtt 467 ||||||||| | |||||||||||||| |||||||| ||||| |||||||| || Sbjct: 438 tgttttgcgcatacgtggcaaaaatatcctggagaatgagcacgtaaagattggtgcatt 497 Query: 468 tcatactttagaacttgagctgaagagaccttttgt 503 |||||||| |||||||||||||| |||||||||| Sbjct: 498 ccatactttggaacttgagctgaaacgaccttttgt 533 Score = 46.1 bits (23), Expect = 0.54 Identities = 38/43 (88%) Strand = Plus / Plus Query: 566 ctgcaagtgctgatctagcagttattcttatgcaagaaggact 608 |||| |||||||||||||| || |||| |||||||||||||| Sbjct: 596 ctgctagtgctgatctagctgtagttctaatgcaagaaggact 638
>emb|AL161571.2|ATCHRIV67 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 67 Length = 200001 Score = 61.9 bits (31), Expect = 9e-06 Identities = 43/47 (91%) Strand = Plus / Minus Query: 661 gaaacatcgatccctaggaaacatggacctgccattgctggttacga 707 |||||||| || |||||||| ||||||||||| |||||||||||||| Sbjct: 115806 gaaacatccattcctaggaagcatggacctgcaattgctggttacga 115760 Score = 46.1 bits (23), Expect = 0.54 Identities = 38/43 (88%) Strand = Plus / Minus Query: 566 ctgcaagtgctgatctagcagttattcttatgcaagaaggact 608 |||| |||||||||||||| || |||| |||||||||||||| Sbjct: 116077 ctgctagtgctgatctagctgtagttctaatgcaagaaggact 116035 Score = 46.1 bits (23), Expect = 0.54 Identities = 32/35 (91%) Strand = Plus / Minus Query: 469 catactttagaacttgagctgaagagaccttttgt 503 |||||||| |||||||||||||| |||||||||| Sbjct: 117116 catactttggaacttgagctgaaacgaccttttgt 117082 Score = 44.1 bits (22), Expect = 2.1 Identities = 31/34 (91%) Strand = Plus / Minus Query: 1841 tgcagaattggcgcagttgacaggaatagcagct 1874 |||||||||||| ||| |||| |||||||||||| Sbjct: 114020 tgcagaattggcacagctgactggaatagcagct 113987
>emb|AL035602.1|ATT29A15 Arabidopsis thaliana DNA chromosome 4, BAC clone T29A15 (ESSA project) Length = 95679 Score = 61.9 bits (31), Expect = 9e-06 Identities = 43/47 (91%) Strand = Plus / Minus Query: 661 gaaacatcgatccctaggaaacatggacctgccattgctggttacga 707 |||||||| || |||||||| ||||||||||| |||||||||||||| Sbjct: 55096 gaaacatccattcctaggaagcatggacctgcaattgctggttacga 55050 Score = 46.1 bits (23), Expect = 0.54 Identities = 38/43 (88%) Strand = Plus / Minus Query: 566 ctgcaagtgctgatctagcagttattcttatgcaagaaggact 608 |||| |||||||||||||| || |||| |||||||||||||| Sbjct: 55367 ctgctagtgctgatctagctgtagttctaatgcaagaaggact 55325 Score = 46.1 bits (23), Expect = 0.54 Identities = 32/35 (91%) Strand = Plus / Minus Query: 469 catactttagaacttgagctgaagagaccttttgt 503 |||||||| |||||||||||||| |||||||||| Sbjct: 56406 catactttggaacttgagctgaaacgaccttttgt 56372 Score = 44.1 bits (22), Expect = 2.1 Identities = 31/34 (91%) Strand = Plus / Minus Query: 1841 tgcagaattggcgcagttgacaggaatagcagct 1874 |||||||||||| ||| |||| |||||||||||| Sbjct: 53310 tgcagaattggcacagctgactggaatagcagct 53277
>gb|AC189237.1| Brassica rapa subsp. pekinensis clone KBrB014O06, complete sequence Length = 105067 Score = 60.0 bits (30), Expect = 4e-05 Identities = 45/50 (90%) Strand = Plus / Minus Query: 661 gaaacatcgatccctaggaaacatggacctgccattgctggttacgaatc 710 |||||||| || |||||||| ||||| ||||| ||||||||||||||||| Sbjct: 52082 gaaacatcaattcctaggaagcatgggcctgcgattgctggttacgaatc 52033 Score = 42.1 bits (21), Expect = 8.5 Identities = 42/49 (85%) Strand = Plus / Minus Query: 1377 cagcccgagcgtgttatggacctaagcatgttgaggttgcacatgagcg 1425 |||| ||||| || |||||||| || ||||| || |||||||||||||| Sbjct: 50993 cagctcgagcatgctatggaccaaaacatgtagaagttgcacatgagcg 50945
>gb|CP000438.1| Pseudomonas aeruginosa UCBPP-PA14, complete genome Length = 6537648 Score = 46.1 bits (23), Expect = 0.54 Identities = 23/23 (100%) Strand = Plus / Plus Query: 222 gctgctgccggaggaggaggacg 244 ||||||||||||||||||||||| Sbjct: 4378766 gctgctgccggaggaggaggacg 4378788 Score = 42.1 bits (21), Expect = 8.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 221 agctgctgccggaggaggagg 241 ||||||||||||||||||||| Sbjct: 3811464 agctgctgccggaggaggagg 3811444
>ref|XM_624736.2| PREDICTED: Apis mellifera similar to solute carrier family 25 (carnitine/acylcarnitine translocase), member 20 (LOC552361), mRNA Length = 1133 Score = 44.1 bits (22), Expect = 2.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1253 tggtataggcatagtttgaagg 1274 |||||||||||||||||||||| Sbjct: 123 tggtataggcatagtttgaagg 102
>ref|XM_962033.1| PREDICTED: Tribolium castaneum similar to Protein pelota (LOC655490), mRNA Length = 1152 Score = 44.1 bits (22), Expect = 2.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 248 tgtggcacgcgtacaatctcat 269 |||||||||||||||||||||| Sbjct: 77 tgtggcacgcgtacaatctcat 98
>gb|AC128706.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0063F24, complete sequence Length = 152738 Score = 44.1 bits (22), Expect = 2.1 Identities = 25/26 (96%) Strand = Plus / Minus Query: 80 tctcctctcctccactcgccgccgtc 105 ||||||||||||| |||||||||||| Sbjct: 53982 tctcctctcctcccctcgccgccgtc 53957
>gb|AC126403.7| Mus musculus chromosome 15, clone RP24-483E7, complete sequence Length = 152384 Score = 44.1 bits (22), Expect = 2.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1441 tcttctgatgacagatactttg 1462 |||||||||||||||||||||| Sbjct: 91549 tcttctgatgacagatactttg 91570
>gb|AC118216.15| Mus musculus chromosome 1, clone RP23-209N14, complete sequence Length = 269784 Score = 44.1 bits (22), Expect = 2.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 75 tcccctctcctctcctccactc 96 |||||||||||||||||||||| Sbjct: 229126 tcccctctcctctcctccactc 229105
>gb|AC161111.2| Mus musculus chromosome 15, clone RP23-50B6, complete sequence Length = 200074 Score = 44.1 bits (22), Expect = 2.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1441 tcttctgatgacagatactttg 1462 |||||||||||||||||||||| Sbjct: 32003 tcttctgatgacagatactttg 32024
>gb|AC080005.24| Homo sapiens 3 BAC RP11-475N22 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 169583 Score = 44.1 bits (22), Expect = 2.1 Identities = 25/26 (96%) Strand = Plus / Plus Query: 1697 aaaattaaaaattaactgaatatagt 1722 ||||||||||||||| |||||||||| Sbjct: 133372 aaaattaaaaattaattgaatatagt 133397
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12 Length = 27566993 Score = 44.1 bits (22), Expect = 2.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 225 gctgccggaggaggaggacgac 246 |||||||||||||||||||||| Sbjct: 10736876 gctgccggaggaggaggacgac 10736897
>emb|AL591686.10| Human DNA sequence from clone RP11-561I11 on chromosome 1 Contains the 3' end of a novel gene (FLJ40773) and two novel genes, complete sequence Length = 175463 Score = 44.1 bits (22), Expect = 2.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 926 ttctatattttctcattcaatt 947 |||||||||||||||||||||| Sbjct: 118566 ttctatattttctcattcaatt 118587
>gb|AC007717.8|AC007717 Homo sapiens chromosome 18, clone RP11-315O17, complete sequence Length = 168787 Score = 44.1 bits (22), Expect = 2.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1498 tgtgaacttggttgagtcagtc 1519 |||||||||||||||||||||| Sbjct: 136477 tgtgaacttggttgagtcagtc 136498
>dbj|AP006656.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT05H03, TM0342a, complete sequence Length = 57652 Score = 44.1 bits (22), Expect = 2.1 Identities = 25/26 (96%) Strand = Plus / Plus Query: 1695 agaaaattaaaaattaactgaatata 1720 |||||||||||||||||| ||||||| Sbjct: 45427 agaaaattaaaaattaacggaatata 45452
>emb|AL358292.4|CNS05TDZ Human chromosome 14 DNA sequence BAC R-736P16 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 180211 Score = 44.1 bits (22), Expect = 2.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1498 tgtgaacttggttgagtcagtc 1519 |||||||||||||||||||||| Sbjct: 54907 tgtgaacttggttgagtcagtc 54928
>emb|AL831795.4|CNS08CA8 Oryza sativa chromosome 12, . BAC OSJNBb0085N21 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 135105 Score = 44.1 bits (22), Expect = 2.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 225 gctgccggaggaggaggacgac 246 |||||||||||||||||||||| Sbjct: 101772 gctgccggaggaggaggacgac 101793
>emb|AL731876.3|CNS08C8G Oryza sativa chromosome 12, . BAC OJ1194_E11 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 119388 Score = 44.1 bits (22), Expect = 2.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 225 gctgccggaggaggaggacgac 246 |||||||||||||||||||||| Sbjct: 3225 gctgccggaggaggaggacgac 3246
>gb|AF008191.1|AF008191 Homo sapiens putative G6 protein (GR6) gene, complete cds Length = 24903 Score = 44.1 bits (22), Expect = 2.1 Identities = 25/26 (96%) Strand = Plus / Plus Query: 1697 aaaattaaaaattaactgaatatagt 1722 ||||||||||||||| |||||||||| Sbjct: 531 aaaattaaaaattaattgaatatagt 556
>gb|AC123917.25| Mus musculus chromosome 15, clone RP23-281P5, complete sequence Length = 184959 Score = 44.1 bits (22), Expect = 2.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1690 tgcaaagaaaattaaaaattaa 1711 |||||||||||||||||||||| Sbjct: 97232 tgcaaagaaaattaaaaattaa 97211
>emb|BX936352.19| Zebrafish DNA sequence from clone DKEY-37I13 in linkage group 6, complete sequence Length = 161193 Score = 42.1 bits (21), Expect = 8.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 352 gtgaagctcaagttggaaatt 372 ||||||||||||||||||||| Sbjct: 121807 gtgaagctcaagttggaaatt 121787
>gb|AE004091.2| Pseudomonas aeruginosa PAO1, complete genome Length = 6264404 Score = 42.1 bits (21), Expect = 8.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 221 agctgctgccggaggaggagg 241 ||||||||||||||||||||| Sbjct: 1823351 agctgctgccggaggaggagg 1823371
>gb|AC188097.1| Pongo pygmaeus abelii chromosome UNK clone CH276-27H12, complete sequence Length = 204235 Score = 42.1 bits (21), Expect = 8.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 2102 ttggttatttttgacttgata 2122 ||||||||||||||||||||| Sbjct: 64601 ttggttatttttgacttgata 64581
>emb|CR847870.16| Zebrafish DNA sequence from clone DKEY-170G11 in linkage group 22, complete sequence Length = 237985 Score = 42.1 bits (21), Expect = 8.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1506 tggttgagtcagtcaagaaat 1526 ||||||||||||||||||||| Sbjct: 116507 tggttgagtcagtcaagaaat 116487
>ref|NM_001036447.1| Arabidopsis thaliana unknown protein (AT2G41350) mRNA, complete cds Length = 1115 Score = 42.1 bits (21), Expect = 8.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 477 agaacttgagctgaagagacc 497 ||||||||||||||||||||| Sbjct: 556 agaacttgagctgaagagacc 536
>ref|NM_129698.1| Arabidopsis thaliana unknown protein (AT2G41350) mRNA, complete cds Length = 1217 Score = 42.1 bits (21), Expect = 8.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 477 agaacttgagctgaagagacc 497 ||||||||||||||||||||| Sbjct: 565 agaacttgagctgaagagacc 545
>gb|BT015461.1| Arabidopsis thaliana At2g41350 mRNA sequence Length = 897 Score = 42.1 bits (21), Expect = 8.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 477 agaacttgagctgaagagacc 497 ||||||||||||||||||||| Sbjct: 338 agaacttgagctgaagagacc 318
>gb|AY682094.1| Homo sapiens fibroblast growth factor 9 (glia-activating factor) (FGF9) gene, complete cds Length = 33221 Score = 42.1 bits (21), Expect = 8.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 222 gctgctgccggaggaggagga 242 ||||||||||||||||||||| Sbjct: 5024 gctgctgccggaggaggagga 5004
>gb|AC135567.3| Mus musculus BAC clone RP23-312I24 from chromosome 16, complete sequence Length = 208603 Score = 42.1 bits (21), Expect = 8.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1846 aattggcgcagttgacaggaa 1866 ||||||||||||||||||||| Sbjct: 121923 aattggcgcagttgacaggaa 121903
>gb|DQ132068.1| Arabidopsis thaliana ecotype Kas-1 At5g24300 gene, partial cds Length = 1145 Score = 42.1 bits (21), Expect = 8.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 2051 tttcttttgagaagatatctttatt 2075 |||||||||| |||||||||||||| Sbjct: 316 tttcttttgataagatatctttatt 340
>gb|DQ132067.1| Arabidopsis thaliana ecotype Lisse-1 At5g24300 gene, partial cds Length = 1144 Score = 42.1 bits (21), Expect = 8.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 2051 tttcttttgagaagatatctttatt 2075 |||||||||| |||||||||||||| Sbjct: 316 tttcttttgataagatatctttatt 340
>gb|DQ132066.1| Arabidopsis thaliana ecotype Nok-0 At5g24300 gene, partial cds Length = 1144 Score = 42.1 bits (21), Expect = 8.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 2051 tttcttttgagaagatatctttatt 2075 |||||||||| |||||||||||||| Sbjct: 316 tttcttttgataagatatctttatt 340
>gb|DQ132065.1| Arabidopsis thaliana ecotype Bla-10 At5g24300 gene, partial cds Length = 1145 Score = 42.1 bits (21), Expect = 8.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 2051 tttcttttgagaagatatctttatt 2075 |||||||||| |||||||||||||| Sbjct: 316 tttcttttgataagatatctttatt 340
>gb|DQ132064.1| Arabidopsis thaliana ecotype Cvi-0 At5g24300 gene, partial cds Length = 1145 Score = 42.1 bits (21), Expect = 8.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 2051 tttcttttgagaagatatctttatt 2075 |||||||||| |||||||||||||| Sbjct: 316 tttcttttgataagatatctttatt 340
>gb|DQ132063.1| Arabidopsis thaliana ecotype Ler-0 At5g24300 gene, partial cds Length = 1145 Score = 42.1 bits (21), Expect = 8.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 2051 tttcttttgagaagatatctttatt 2075 |||||||||| |||||||||||||| Sbjct: 316 tttcttttgataagatatctttatt 340
>gb|AC133967.2| Mus musculus BAC clone RP23-14J5 from chromosome 16, complete sequence Length = 195446 Score = 42.1 bits (21), Expect = 8.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1846 aattggcgcagttgacaggaa 1866 ||||||||||||||||||||| Sbjct: 189060 aattggcgcagttgacaggaa 189040
>ref|XM_848587.1| PREDICTED: Canis familiaris similar to Transcription factor Sp8 (LOC610985), mRNA Length = 1327 Score = 42.1 bits (21), Expect = 8.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 225 gctgccggaggaggaggacga 245 ||||||||||||||||||||| Sbjct: 268 gctgccggaggaggaggacga 248
>gb|AC122250.4| Mus musculus BAC clone RP23-167A3 from chromosome 19, complete sequence Length = 202060 Score = 42.1 bits (21), Expect = 8.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 2044 gttgtattttcttttgagaag 2064 ||||||||||||||||||||| Sbjct: 87748 gttgtattttcttttgagaag 87728
>dbj|AP008230.1| Desulfitobacterium hafniense Y51 genomic DNA, complete genome Length = 5727534 Score = 42.1 bits (21), Expect = 8.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 311 ttctcagggattctgcttctg 331 ||||||||||||||||||||| Sbjct: 3531892 ttctcagggattctgcttctg 3531912
>gb|AY143923.1| Arabidopsis thaliana At2g41350/F13H10.10 mRNA, complete cds Length = 897 Score = 42.1 bits (21), Expect = 8.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 477 agaacttgagctgaagagacc 497 ||||||||||||||||||||| Sbjct: 341 agaacttgagctgaagagacc 321
>gb|AC073493.27| Homo sapiens Xp BAC RP11-631N21 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 211422 Score = 42.1 bits (21), Expect = 8.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 75 tcccctctcctctcctccactcgcc 99 |||||||||||||||||| |||||| Sbjct: 10415 tcccctctcctctcctcccctcgcc 10439
>gb|AC005662.3| Arabidopsis thaliana chromosome 2 clone F13H10 map CIC11C08, complete sequence Length = 96066 Score = 42.1 bits (21), Expect = 8.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 477 agaacttgagctgaagagacc 497 ||||||||||||||||||||| Sbjct: 39790 agaacttgagctgaagagacc 39810
>gb|AY075602.1| Arabidopsis thaliana At2g41350/F13H10.10 mRNA, complete cds Length = 1201 Score = 42.1 bits (21), Expect = 8.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 477 agaacttgagctgaagagacc 497 ||||||||||||||||||||| Sbjct: 555 agaacttgagctgaagagacc 535
>gb|AF435944.1| Chalinolobus beatrix protamine P1 gene, complete cds Length = 349 Score = 42.1 bits (21), Expect = 8.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 222 gctgctgccggaggaggagga 242 ||||||||||||||||||||| Sbjct: 128 gctgctgccggaggaggagga 148
>emb|CR695420.2|CNS0FZJC Tetraodon nigroviridis full-length cDNA Length = 1003 Score = 42.1 bits (21), Expect = 8.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 76 cccctctcctctcctccactc 96 ||||||||||||||||||||| Sbjct: 854 cccctctcctctcctccactc 874
>emb|Z75889.1|HS267P19 Human DNA sequence from clone RP1-267P19 on chromosome 13 Contains part of the gene for androgen-induced prostate proliferative shutoff associated protein (AS3) (CG008, FLJ23236, KIAA0979) and two CpG islands, complete sequence Length = 113704 Score = 42.1 bits (21), Expect = 8.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 2102 ttggttatttttgacttgata 2122 ||||||||||||||||||||| Sbjct: 12434 ttggttatttttgacttgata 12454
>emb|AL603791.3| Human DNA sequence from clone RP11-44E1 on chromosome 1 Contains part of the KCNH1 gene for a potassium voltage-gated channel, subfamily H (eag-related), member, complete sequence Length = 17716 Score = 42.1 bits (21), Expect = 8.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1860 acaggaatagcagctatactt 1880 ||||||||||||||||||||| Sbjct: 17556 acaggaatagcagctatactt 17576
>emb|AL365181.24| Human DNA sequence from clone RP11-284F21 on chromosome 1 Contains the 5' end of the MEF2D gene for MADS box transcription enhancer factor 2 polypeptide D (myocyte enhancer factor 2D), the IQGAP3 gene for IQ motif containing GTPase activating protein 3, a novel gene, the APOA1BP gene for apolipoprotein A-I binding protein, a novel gene (FLJ20249), a novel gene, the gene for brain link protein-1 (BRAL1), a novel gene, the 5' end of the BCAN gene for brevican, the 3' end of a novel gene and three CpG islands, complete sequence Length = 164512 Score = 42.1 bits (21), Expect = 8.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1697 aaaattaaaaattaactgaat 1717 ||||||||||||||||||||| Sbjct: 117420 aaaattaaaaattaactgaat 117440
>emb|AL353140.13| Human DNA sequence from clone RP13-153N15 on chromosome X Contains the 3' end of a anovel gene, complete sequence Length = 174196 Score = 42.1 bits (21), Expect = 8.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1697 aaaattaaaaattaactgaat 1717 ||||||||||||||||||||| Sbjct: 96984 aaaattaaaaattaactgaat 97004
>emb|AL158831.15| Human DNA sequence from clone RP11-564A4 on chromosome 9, complete sequence Length = 162700 Score = 42.1 bits (21), Expect = 8.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 2093 ccacatctattggttattttt 2113 ||||||||||||||||||||| Sbjct: 141960 ccacatctattggttattttt 141940
>emb|AL139378.15| Human DNA sequence from clone RP11-271B5 on chromosome 13 Contains the FGF9 gene for fibroblast growth factor 9 (glia-activating factor (GAF, HBFG-9)), a ribosomal protein S7 (40S ribosomal protein S7) (RPS7) pseudogene and two CpG islands, complete sequence Length = 166703 Score = 42.1 bits (21), Expect = 8.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 222 gctgctgccggaggaggagga 242 ||||||||||||||||||||| Sbjct: 58139 gctgctgccggaggaggagga 58119
>gb|AC092017.2| Homo sapiens chromosome 1 clone RP11-543B16, complete sequence Length = 193041 Score = 42.1 bits (21), Expect = 8.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1860 acaggaatagcagctatactt 1880 ||||||||||||||||||||| Sbjct: 1840 acaggaatagcagctatactt 1860
>gb|AY084814.1| Arabidopsis thaliana clone 11854 mRNA, complete sequence Length = 1217 Score = 42.1 bits (21), Expect = 8.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 477 agaacttgagctgaagagacc 497 ||||||||||||||||||||| Sbjct: 565 agaacttgagctgaagagacc 545
>gb|AF121673.1|AF121673 Arabidopsis thaliana soluble starch synthase gene, complete cds Length = 4617 Score = 42.1 bits (21), Expect = 8.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 2051 tttcttttgagaagatatctttatt 2075 |||||||||| |||||||||||||| Sbjct: 2811 tttcttttgataagatatctttatt 2835
>emb|CR388164.9| Zebrafish DNA sequence from clone DKEY-74H17 in linkage group 17, complete sequence Length = 115163 Score = 42.1 bits (21), Expect = 8.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 2030 tttaatgtatccttgttgtattttctttt 2058 ||||||||||||||||||| |||| |||| Sbjct: 28949 tttaatgtatccttgttgttttttatttt 28977
>emb|AL935208.8| Zebrafish DNA sequence from clone CH211-241N17, complete sequence Length = 151406 Score = 42.1 bits (21), Expect = 8.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 352 gtgaagctcaagttggaaatt 372 ||||||||||||||||||||| Sbjct: 53042 gtgaagctcaagttggaaatt 53022
>emb|BX293544.7| Mouse DNA sequence from clone RP23-109C9 on chromosome 2, complete sequence Length = 97505 Score = 42.1 bits (21), Expect = 8.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 765 tttcgaagtggtccaatgtgttgta 789 ||||||||||||| ||||||||||| Sbjct: 39569 tttcgaagtggtctaatgtgttgta 39545
>emb|AL731781.23| Mouse DNA sequence from clone RP23-257N12 on chromosome X, complete sequence Length = 137279 Score = 42.1 bits (21), Expect = 8.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1682 ggaaatgttgcaaagaaaattaaaa 1706 |||||||||| |||||||||||||| Sbjct: 54761 ggaaatgttgaaaagaaaattaaaa 54785
>emb|AL034393.1|CEY18D10A Caenorhabditis elegans YAC Y18D10A, complete sequence Length = 152878 Score = 42.1 bits (21), Expect = 8.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1143 atatttgctaaatgagtggttggtt 1167 ||||||||||||||| ||||||||| Sbjct: 46334 atatttgctaaatgactggttggtt 46358
>emb|CT010477.16| Mouse DNA sequence from clone RP23-361M19 on chromosome 13, complete sequence Length = 192967 Score = 42.1 bits (21), Expect = 8.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1696 gaaaattaaaaattaactgaatata 1720 |||||||||||||||| |||||||| Sbjct: 164713 gaaaattaaaaattaaatgaatata 164737
>emb|AL110498.1|CEY64G10A Caenorhabditis elegans YAC Y64G10A, complete sequence Length = 87428 Score = 42.1 bits (21), Expect = 8.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1691 gcaaagaaaattaaaaattaa 1711 ||||||||||||||||||||| Sbjct: 10708 gcaaagaaaattaaaaattaa 10728
>emb|AL627103.13| Mouse DNA sequence from clone RP23-414M10 on chromosome 4, complete sequence Length = 194995 Score = 42.1 bits (21), Expect = 8.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 2042 ttgttgtattttcttttgaga 2062 ||||||||||||||||||||| Sbjct: 97663 ttgttgtattttcttttgaga 97643
>emb|AL353724.11| Human DNA sequence from clone RP11-448I13 on chromosome 13, complete sequence Length = 120652 Score = 42.1 bits (21), Expect = 8.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 2102 ttggttatttttgacttgata 2122 ||||||||||||||||||||| Sbjct: 31543 ttggttatttttgacttgata 31563
>gb|M29764.1|CHKMHBLIIB Chicken MHC class II B-LBIII-beta gene, exon 1 Length = 444 Score = 42.1 bits (21), Expect = 8.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 222 gctgctgccggaggaggagga 242 ||||||||||||||||||||| Sbjct: 123 gctgctgccggaggaggagga 103 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 425,997,834 Number of extensions: 23693354 Number of successful extensions: 158439 Number of sequences better than 10.0: 79 Number of HSP's gapped: 158432 Number of HSP's successfully gapped: 193 Length of query: 2214 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 2191 Effective length of database: 18,503,978,556 Effective search space: 40542217016196 Effective search space used: 40542217016196 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 15 (30.2 bits)
