ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf132b21 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK103266:Os02g0513100 | 37 | 0.015 | 2 | Os12g0476200:Os12g0476200 | 30 | 1.8 | 3 | AK066439:Os03g0323500 | 30 | 3.0 | 4 | AK100573:Os07g0495900 | 29 | 4.0 | 5 | AK067729:Os07g0495900 | 29 | 4.0 | 6 | AK065813:Os07g0495900 | 29 | 4.0 | 7 | AK060293:Os07g0495900 | 29 | 4.0 | 8 | AK103364:Os01g0229300 | 29 | 5.2 | 9 | AF326768:Os01g0229300 | 29 | 5.2 |
|---|
>AK103266:Os02g0513100 | Length = 319 Score = 37.4 bits (85), Expect = 0.015 Identities = 15/19 (78%), Positives = 18/19 (94%) Frame = +1 Query: 166 MAFLNMEQHTWAFTFGILG 222 MAF++ME+ TWAFTFGILG Sbjct: 1 MAFMSMERSTWAFTFGILG 19
>Os12g0476200:Os12g0476200 | Length = 296 Score = 30.4 bits (67), Expect = 1.8 Identities = 15/30 (50%), Positives = 22/30 (73%), Gaps = 3/30 (10%) Frame = +1 Query: 166 MAFLNMEQHTWAFTFGILG---TYTTHIHP 246 MA L++ QH WAF FG+LG ++TT++ P Sbjct: 1 MAGLSL-QHPWAFAFGLLGNLISFTTYLAP 29
>AK066439:Os03g0323500 | Length = 540 Score = 29.6 bits (65), Expect = 3.0 Identities = 14/41 (34%), Positives = 19/41 (46%) Frame = -3 Query: 447 SEQKRWLSSTKGIEEGAQRSDHGSNPCKQPSKQAGTSDGSS 325 ++Q WL S+K + A +D PCK S A S S Sbjct: 411 NDQPTWLQSSKTSKNNASVTDQSDVPCKYTSSDASNSQAWS 451
>AK100573:Os07g0495900 | Length = 694 Score = 29.3 bits (64), Expect = 4.0 Identities = 14/46 (30%), Positives = 26/46 (56%) Frame = -3 Query: 459 RSIYSEQKRWLSSTKGIEEGAQRSDHGSNPCKQPSKQAGTSDGSSF 322 + IY++++ +L +G+ +GA G+NP K++G G SF Sbjct: 378 KKIYNDRRLFLGGGQGVMQGASFGAAGTNPV--ADKRSGRGKGHSF 421
>AK067729:Os07g0495900 | Length = 1121 Score = 29.3 bits (64), Expect = 4.0 Identities = 14/46 (30%), Positives = 26/46 (56%) Frame = -3 Query: 459 RSIYSEQKRWLSSTKGIEEGAQRSDHGSNPCKQPSKQAGTSDGSSF 322 + IY++++ +L +G+ +GA G+NP K++G G SF Sbjct: 805 KKIYNDRRLFLGGGQGVMQGASFGAAGTNPV--ADKRSGRGKGHSF 848
>AK065813:Os07g0495900 | Length = 948 Score = 29.3 bits (64), Expect = 4.0 Identities = 14/46 (30%), Positives = 26/46 (56%) Frame = -3 Query: 459 RSIYSEQKRWLSSTKGIEEGAQRSDHGSNPCKQPSKQAGTSDGSSF 322 + IY++++ +L +G+ +GA G+NP K++G G SF Sbjct: 632 KKIYNDRRLFLGGGQGVMQGASFGAAGTNPV--ADKRSGRGKGHSF 675
>AK060293:Os07g0495900 | Length = 319 Score = 29.3 bits (64), Expect = 4.0 Identities = 14/46 (30%), Positives = 26/46 (56%) Frame = -3 Query: 459 RSIYSEQKRWLSSTKGIEEGAQRSDHGSNPCKQPSKQAGTSDGSSF 322 + IY++++ +L +G+ +GA G+NP K++G G SF Sbjct: 24 KKIYNDRRLFLGGGQGVMQGASFGAAGTNPV--ADKRSGRGKGHSF 67
>AK103364:Os01g0229300 | Length = 1005 Score = 28.9 bits (63), Expect = 5.2 Identities = 13/22 (59%), Positives = 16/22 (72%) Frame = -3 Query: 390 SDHGSNPCKQPSKQAGTSDGSS 325 SD+G+ P P+KQ GTSDG S Sbjct: 130 SDNGTAPRTLPAKQNGTSDGCS 151
>AF326768:Os01g0229300 | Length = 1057 Score = 28.9 bits (63), Expect = 5.2 Identities = 13/22 (59%), Positives = 16/22 (72%) Frame = -3 Query: 390 SDHGSNPCKQPSKQAGTSDGSS 325 SD+G+ P P+KQ GTSDG S Sbjct: 118 SDNGTAPRTLPAKQNGTSDGCS 139 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 26,114,473 Number of extensions: 593298 Number of successful extensions: 1654 Number of sequences better than 10.0: 9 Number of HSP's gapped: 1653 Number of HSP's successfully gapped: 9 Length of query: 302 Length of database: 15,399,855 Length adjustment: 100 Effective length of query: 202 Effective length of database: 11,395,755 Effective search space: 2301942510 Effective search space used: 2301942510 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
