ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf132b18 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_001062741.1| Oryza sativa (japonica cultivar-group) Os05g0543700 (Os05g0543700) mRNA, complete cds Length = 1432 Score = 848 bits (428), Expect = 0.0 Identities = 839/976 (85%) Strand = Plus / Plus Query: 182 gccatggtgaaggagaccgcctactacgaaaccctgggggtcagcgtcgacgcctccccc 241 |||||||||||||| ||||| |||||||| ||||||||||||||||| |||||||||||| Sbjct: 141 gccatggtgaaggataccgcgtactacgacaccctgggggtcagcgtggacgcctccccc 200 Query: 242 tccgacatcaagaaggcatactacgtccaggccaggctggtgcacccggacaagaatccc 301 |||| ||||||||||| || ||| || |||| | || |||||| |||||||||||||| Sbjct: 201 gccgagatcaagaaggcctattacctcaaggcgaagcaggtgcatccggacaagaatcct 260 Query: 302 ggcaaccccgacgcggcgcggaaattccaggatcttggagaggcctaccaagtcctaagc 361 || |||||||| ||||||| |||||| ||||| || |||||||| |||||||| ||||| Sbjct: 261 gggaaccccgatgcggcgcagaaatttcaggaactcggagaggcataccaagttttaagc 320 Query: 362 gatccagccaagaaggaggcttatgataagcatggaaaggagggcctttcccaggaaaac 421 ||||| | || | |||||||||||||||||||||||||||||| ||| | ||||| ||| Sbjct: 321 gatccttcaaaaagggaggcttatgataagcatggaaaggaggggcttcctcaggataac 380 Query: 422 atggtcgatcccgctgctgtctttgggatgctttttggaagcgactattttgaagactat 481 ||||| ||||| ||||||||||||||||||||||||||||| |||||||||||||| ||| Sbjct: 381 atggtggatcctgctgctgtctttgggatgctttttggaagtgactattttgaagattat 440 Query: 482 gttggtcagcttgctctggcatccatagcttcagtggaggttgatgaaggtttaagcagt 541 ||||| |||||||| |||||||||||||| |||||||| || || ||| |||| |||| Sbjct: 441 gttggacagcttgcactggcatccatagcatcagtggaagtcgaggaaaacttaaacagt 500 Query: 542 caagacgccagagcaaaggttcaagagaaaataaaagggttgcaaacagaaagagagcaa 601 ||||| || |||| ||||||||||||||||| |||| ||| |||| ||||||||| || Sbjct: 501 caagaagcaagagggaaggttcaagagaaaattaaagagttacaaaaagaaagagaacag 560 Query: 602 aagcttactcagagcctaaaggatcgacttcagccatatgtggatggtagaaaggatgat 661 ||||||| |||||||||||| ||||||||||| |||| |||||||| ||||||||||| Sbjct: 561 aagcttattcagagcctaaaagatcgacttcaaccatttgtggatgagagaaaggatgaa 620 Query: 662 tttgtgcactgggcgaatgcagaagctaagcgtttatctgaagcagcttttggtgaggct 721 ||||| ||||||| |||| |||||| |||| ||||| | ||||||||||| |||||| Sbjct: 621 tttgttaactgggcaaatggggaagctcagcggttatcccatgcagcttttggcgaggct 680 Query: 722 atgcttcacactgttggatatatttatgtacggcaagcgtcaagagaacttggaaagagt 781 ||||| |||| |||| ||||||||||| || ||||| | |||||||||||||||||| Sbjct: 681 atgctcaccactattggctatatttatgtgcgacaagcagcgagagaacttggaaagagt 740 Query: 782 aaattgtatatgggtgtaccattcatagctgagtgggtaagagacaagggtcacaccatt 841 || ||||||||||||||||||||||||||||||||||| ||||||||||| ||| |||| Sbjct: 741 aagttgtatatgggtgtaccattcatagctgagtgggtcagagacaagggccactgcatt 800 Query: 842 aaatcgcaagttcatgctgcttcaggtgctattgctctgatgcagctacaagatggaatg 901 ||||| || ||| |||| |||||||| ||||| |||||||||||||||||||| || ||| Sbjct: 801 aaatcacaggttaatgccgcttcaggcgctatcgctctgatgcagctacaagaagggatg 860 Query: 902 aaaaaggtggaggagggtgccaataaggaagaacagcttatgaagagttttgaggagaaa 961 |||||| ||||||| ||| ||||||||| || ||| ||||||||||||| ||||||||| Sbjct: 861 aaaaagatggaggaaagtgacaataaggaggaccagattatgaagagtttcgaggagaaa 920 Query: 962 aaggaagccatgcttaattctctatggaaaattaatgtggttgatatcgagtcaactctt 1021 || || |||||||||| || |||||||||||||||||||||||||| |||||||| ||| Sbjct: 921 aaagatgccatgcttagttacctatggaaaattaatgtggttgatattgagtcaacactt 980 Query: 1022 tcccgagtatgccaagcagttcttaaagatagcactgtctcaaaagatgttctgaagttg 1081 | | || |||||||||||| | ||||| || |||| ||||||||||||||||||| Sbjct: 981 acacatgtttgccaagcagttttgaaagacgccagtgtcccaaaagatgttctgaagtta 1040 Query: 1082 cgaggaaaagcattgaaaaaacttggaacgatattccaaggcgcaaaatctctctaccat 1141 |||| || |||||||||||| ||||| ||||||||||| || || || ||||| |||||| Sbjct: 1041 cgagcaagagcattgaaaaagcttgggacgatattccagggtgcgaagtctctgtaccat 1100 Query: 1142 cgcgagaacagcctac 1157 || || |||||||||| Sbjct: 1101 cgtgaaaacagcctac 1116
>dbj|AK103912.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-010-C07, full insert sequence Length = 1390 Score = 848 bits (428), Expect = 0.0 Identities = 839/976 (85%) Strand = Plus / Plus Query: 182 gccatggtgaaggagaccgcctactacgaaaccctgggggtcagcgtcgacgcctccccc 241 |||||||||||||| ||||| |||||||| ||||||||||||||||| |||||||||||| Sbjct: 99 gccatggtgaaggataccgcgtactacgacaccctgggggtcagcgtggacgcctccccc 158 Query: 242 tccgacatcaagaaggcatactacgtccaggccaggctggtgcacccggacaagaatccc 301 |||| ||||||||||| || ||| || |||| | || |||||| |||||||||||||| Sbjct: 159 gccgagatcaagaaggcctattacctcaaggcgaagcaggtgcatccggacaagaatcct 218 Query: 302 ggcaaccccgacgcggcgcggaaattccaggatcttggagaggcctaccaagtcctaagc 361 || |||||||| ||||||| |||||| ||||| || |||||||| |||||||| ||||| Sbjct: 219 gggaaccccgatgcggcgcagaaatttcaggaactcggagaggcataccaagttttaagc 278 Query: 362 gatccagccaagaaggaggcttatgataagcatggaaaggagggcctttcccaggaaaac 421 ||||| | || | |||||||||||||||||||||||||||||| ||| | ||||| ||| Sbjct: 279 gatccttcaaaaagggaggcttatgataagcatggaaaggaggggcttcctcaggataac 338 Query: 422 atggtcgatcccgctgctgtctttgggatgctttttggaagcgactattttgaagactat 481 ||||| ||||| ||||||||||||||||||||||||||||| |||||||||||||| ||| Sbjct: 339 atggtggatcctgctgctgtctttgggatgctttttggaagtgactattttgaagattat 398 Query: 482 gttggtcagcttgctctggcatccatagcttcagtggaggttgatgaaggtttaagcagt 541 ||||| |||||||| |||||||||||||| |||||||| || || ||| |||| |||| Sbjct: 399 gttggacagcttgcactggcatccatagcatcagtggaagtcgaggaaaacttaaacagt 458 Query: 542 caagacgccagagcaaaggttcaagagaaaataaaagggttgcaaacagaaagagagcaa 601 ||||| || |||| ||||||||||||||||| |||| ||| |||| ||||||||| || Sbjct: 459 caagaagcaagagggaaggttcaagagaaaattaaagagttacaaaaagaaagagaacag 518 Query: 602 aagcttactcagagcctaaaggatcgacttcagccatatgtggatggtagaaaggatgat 661 ||||||| |||||||||||| ||||||||||| |||| |||||||| ||||||||||| Sbjct: 519 aagcttattcagagcctaaaagatcgacttcaaccatttgtggatgagagaaaggatgaa 578 Query: 662 tttgtgcactgggcgaatgcagaagctaagcgtttatctgaagcagcttttggtgaggct 721 ||||| ||||||| |||| |||||| |||| ||||| | ||||||||||| |||||| Sbjct: 579 tttgttaactgggcaaatggggaagctcagcggttatcccatgcagcttttggcgaggct 638 Query: 722 atgcttcacactgttggatatatttatgtacggcaagcgtcaagagaacttggaaagagt 781 ||||| |||| |||| ||||||||||| || ||||| | |||||||||||||||||| Sbjct: 639 atgctcaccactattggctatatttatgtgcgacaagcagcgagagaacttggaaagagt 698 Query: 782 aaattgtatatgggtgtaccattcatagctgagtgggtaagagacaagggtcacaccatt 841 || ||||||||||||||||||||||||||||||||||| ||||||||||| ||| |||| Sbjct: 699 aagttgtatatgggtgtaccattcatagctgagtgggtcagagacaagggccactgcatt 758 Query: 842 aaatcgcaagttcatgctgcttcaggtgctattgctctgatgcagctacaagatggaatg 901 ||||| || ||| |||| |||||||| ||||| |||||||||||||||||||| || ||| Sbjct: 759 aaatcacaggttaatgccgcttcaggcgctatcgctctgatgcagctacaagaagggatg 818 Query: 902 aaaaaggtggaggagggtgccaataaggaagaacagcttatgaagagttttgaggagaaa 961 |||||| ||||||| ||| ||||||||| || ||| ||||||||||||| ||||||||| Sbjct: 819 aaaaagatggaggaaagtgacaataaggaggaccagattatgaagagtttcgaggagaaa 878 Query: 962 aaggaagccatgcttaattctctatggaaaattaatgtggttgatatcgagtcaactctt 1021 || || |||||||||| || |||||||||||||||||||||||||| |||||||| ||| Sbjct: 879 aaagatgccatgcttagttacctatggaaaattaatgtggttgatattgagtcaacactt 938 Query: 1022 tcccgagtatgccaagcagttcttaaagatagcactgtctcaaaagatgttctgaagttg 1081 | | || |||||||||||| | ||||| || |||| ||||||||||||||||||| Sbjct: 939 acacatgtttgccaagcagttttgaaagacgccagtgtcccaaaagatgttctgaagtta 998 Query: 1082 cgaggaaaagcattgaaaaaacttggaacgatattccaaggcgcaaaatctctctaccat 1141 |||| || |||||||||||| ||||| ||||||||||| || || || ||||| |||||| Sbjct: 999 cgagcaagagcattgaaaaagcttgggacgatattccagggtgcgaagtctctgtaccat 1058 Query: 1142 cgcgagaacagcctac 1157 || || |||||||||| Sbjct: 1059 cgtgaaaacagcctac 1074
>dbj|AK071113.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023077E11, full insert sequence Length = 1434 Score = 848 bits (428), Expect = 0.0 Identities = 839/976 (85%) Strand = Plus / Plus Query: 182 gccatggtgaaggagaccgcctactacgaaaccctgggggtcagcgtcgacgcctccccc 241 |||||||||||||| ||||| |||||||| ||||||||||||||||| |||||||||||| Sbjct: 143 gccatggtgaaggataccgcgtactacgacaccctgggggtcagcgtggacgcctccccc 202 Query: 242 tccgacatcaagaaggcatactacgtccaggccaggctggtgcacccggacaagaatccc 301 |||| ||||||||||| || ||| || |||| | || |||||| |||||||||||||| Sbjct: 203 gccgagatcaagaaggcctattacctcaaggcgaagcaggtgcatccggacaagaatcct 262 Query: 302 ggcaaccccgacgcggcgcggaaattccaggatcttggagaggcctaccaagtcctaagc 361 || |||||||| ||||||| |||||| ||||| || |||||||| |||||||| ||||| Sbjct: 263 gggaaccccgatgcggcgcagaaatttcaggaactcggagaggcataccaagttttaagc 322 Query: 362 gatccagccaagaaggaggcttatgataagcatggaaaggagggcctttcccaggaaaac 421 ||||| | || | |||||||||||||||||||||||||||||| ||| | ||||| ||| Sbjct: 323 gatccttcaaaaagggaggcttatgataagcatggaaaggaggggcttcctcaggataac 382 Query: 422 atggtcgatcccgctgctgtctttgggatgctttttggaagcgactattttgaagactat 481 ||||| ||||| ||||||||||||||||||||||||||||| |||||||||||||| ||| Sbjct: 383 atggtggatcctgctgctgtctttgggatgctttttggaagtgactattttgaagattat 442 Query: 482 gttggtcagcttgctctggcatccatagcttcagtggaggttgatgaaggtttaagcagt 541 ||||| |||||||| |||||||||||||| |||||||| || || ||| |||| |||| Sbjct: 443 gttggacagcttgcactggcatccatagcatcagtggaagtcgaggaaaacttaaacagt 502 Query: 542 caagacgccagagcaaaggttcaagagaaaataaaagggttgcaaacagaaagagagcaa 601 ||||| || |||| ||||||||||||||||| |||| ||| |||| ||||||||| || Sbjct: 503 caagaagcaagagggaaggttcaagagaaaattaaagagttacaaaaagaaagagaacag 562 Query: 602 aagcttactcagagcctaaaggatcgacttcagccatatgtggatggtagaaaggatgat 661 ||||||| |||||||||||| ||||||||||| |||| |||||||| ||||||||||| Sbjct: 563 aagcttattcagagcctaaaagatcgacttcaaccatttgtggatgagagaaaggatgaa 622 Query: 662 tttgtgcactgggcgaatgcagaagctaagcgtttatctgaagcagcttttggtgaggct 721 ||||| ||||||| |||| |||||| |||| ||||| | ||||||||||| |||||| Sbjct: 623 tttgttaactgggcaaatggggaagctcagcggttatcccatgcagcttttggcgaggct 682 Query: 722 atgcttcacactgttggatatatttatgtacggcaagcgtcaagagaacttggaaagagt 781 ||||| |||| |||| ||||||||||| || ||||| | |||||||||||||||||| Sbjct: 683 atgctcaccactattggctatatttatgtgcgacaagcagcgagagaacttggaaagagt 742 Query: 782 aaattgtatatgggtgtaccattcatagctgagtgggtaagagacaagggtcacaccatt 841 || ||||||||||||||||||||||||||||||||||| ||||||||||| ||| |||| Sbjct: 743 aagttgtatatgggtgtaccattcatagctgagtgggtcagagacaagggccactgcatt 802 Query: 842 aaatcgcaagttcatgctgcttcaggtgctattgctctgatgcagctacaagatggaatg 901 ||||| || ||| |||| |||||||| ||||| |||||||||||||||||||| || ||| Sbjct: 803 aaatcacaggttaatgccgcttcaggcgctatcgctctgatgcagctacaagaagggatg 862 Query: 902 aaaaaggtggaggagggtgccaataaggaagaacagcttatgaagagttttgaggagaaa 961 |||||| ||||||| ||| ||||||||| || ||| ||||||||||||| ||||||||| Sbjct: 863 aaaaagatggaggaaagtgacaataaggaggaccagattatgaagagtttcgaggagaaa 922 Query: 962 aaggaagccatgcttaattctctatggaaaattaatgtggttgatatcgagtcaactctt 1021 || || |||||||||| || |||||||||||||||||||||||||| |||||||| ||| Sbjct: 923 aaagatgccatgcttagttacctatggaaaattaatgtggttgatattgagtcaacactt 982 Query: 1022 tcccgagtatgccaagcagttcttaaagatagcactgtctcaaaagatgttctgaagttg 1081 | | || |||||||||||| | ||||| || |||| ||||||||||||||||||| Sbjct: 983 acacatgtttgccaagcagttttgaaagacgccagtgtcccaaaagatgttctgaagtta 1042 Query: 1082 cgaggaaaagcattgaaaaaacttggaacgatattccaaggcgcaaaatctctctaccat 1141 |||| || |||||||||||| ||||| ||||||||||| || || || ||||| |||||| Sbjct: 1043 cgagcaagagcattgaaaaagcttgggacgatattccagggtgcgaagtctctgtaccat 1102 Query: 1142 cgcgagaacagcctac 1157 || || |||||||||| Sbjct: 1103 cgtgaaaacagcctac 1118
>gb|DQ245827.1| Zea mays clone 20661 mRNA sequence Length = 1602 Score = 745 bits (376), Expect = 0.0 Identities = 829/980 (84%) Strand = Plus / Plus Query: 182 gccatggtgaaggagaccgcctactacgaaaccctgggggtcagcgtcgacgcctccccc 241 |||||||||||||| | |||||||||||| ||| ||||||||||||||||| ||| || Sbjct: 314 gccatggtgaaggacagcgcctactacgacgtcctaggggtcagcgtcgacgcgtcctcc 373 Query: 242 tccgacatcaagaaggcatactacgtccaggccaggctggtgcacccggacaagaatccc 301 |||| ||||||||||| || ||| || |||| | ||||||||| ||||||||||||||| Sbjct: 374 gccgagatcaagaaggcgtattacatcaaggcgaagctggtgcatccggacaagaatccc 433 Query: 302 ggcaaccccgacgcggcgcggaaattccaggatcttggagaggcctaccaagtcctaagc 361 || ||||| ||||| || | || |||||||| |||||||||||||| ||||| || || Sbjct: 434 gggaaccctgacgccgcactcaagttccaggaacttggagaggcctatcaagttcttagt 493 Query: 362 gatccagccaagaaggaggcttatgataagcatggaaaggagggcctttcccaggaaaac 421 ||||| | || |||||||||||||||||| ||||||||||||| || ||||||| ||| Sbjct: 494 gatcctgggaaaaaggaggcttatgataagtatggaaaggagggtattccccaggataac 553 Query: 422 atggtcgatcccgctgctgtctttgggatgctttttggaagcgactattttgaagactat 481 ||||| ||||| |||||||||||||||||| |||||||||| |||||||||||||| || Sbjct: 554 atggtggatcctgctgctgtctttgggatgatttttggaagtgactattttgaagattac 613 Query: 482 gttggtcagcttgctctggcatccatagcttcagtggaggttgatgaaggtttaagcagt 541 ||||| ||||||||||| ||||| ||||| ||||| |||||||||||| | || |||| Sbjct: 614 gttggccagcttgctctagcatctatagcctcagtagaggttgatgaaaactcaaacagt 673 Query: 542 caagacgccagagcaaaggttcaagagaaaataaaagggttgcaaacagaaagagagcaa 601 ||||| || ||||||||||||||||| || ||||||| ||| |||| ||| ||||| ||| Sbjct: 674 caagaagcaagagcaaaggttcaagaaaagataaaagagttacaaagagagagagaacaa 733 Query: 602 aagcttactcagagcctaaaggatcgacttcagccatatgtggatggtagaaaggatgat 661 |||||||| |||||||| || || |||||||| |||||||| |||| ||||||||||| Sbjct: 734 aagcttacccagagcctgaaagaccgacttcaaccatatgtagatgagagaaaggatgaa 793 Query: 662 tttgtgcactgggcgaatgcagaagctaagcgtttatctgaagcagcttttggtgaggct 721 |||||| || || | ||||||||| |||||||||||||||||| |||||||||||| Sbjct: 794 tttgtgagctacgcaagcacagaagctaggcgtttatctgaagcagcatttggtgaggct 853 Query: 722 atgcttcacactgttggatatatttatgtacggcaagcgtcaagagaacttggaaagagt 781 |||||||||||| |||| |||||||| || |||||||| ||||||||||||| || ||| Sbjct: 854 atgcttcacactattgggtatatttacgtgcggcaagcagcaagagaacttgggaaaagt 913 Query: 782 aaattgtatatgggtgtaccattcatagctgagtgggtaagagacaagggtcacaccatt 841 | | | |||||||||||||| || |||||||||||||| |||||||| || ||| |||| Sbjct: 914 agaatttatatgggtgtaccgtttatagctgagtgggttagagacaaaggacaccacatt 973 Query: 842 aaatcgcaagttcatgctgcttcaggtgctattgctctgatgcagctacaagatggaatg 901 ||||| || ||| |||||||||||||||||||| |||| || || || ||||| || ||| Sbjct: 974 aaatcacaggttaatgctgcttcaggtgctatttctctaatacaacttcaagaagggatg 1033 Query: 902 aaaaaggtggaggagggtgccaataaggaagaacagcttatgaagagttttgaggagaaa 961 |||||| |||| | | | || | ||||| || |||||||||||||||||||||||| Sbjct: 1034 aaaaagatggaaggaagcgagaacagtgaagagcaacttatgaagagttttgaggagaaa 1093 Query: 962 aaggaagccatgcttaattctctatggaaaattaatgtggttgatatcgagtcaactctt 1021 || || |||||||||| || |||||||||||||||||||||||||| |||||||| ||| Sbjct: 1094 aaagatgccatgcttagctcgctatggaaaattaatgtggttgatattgagtcaacactt 1153 Query: 1022 tcccgagtatgccaagcagttcttaaagatagcactgtctcaaaagatgttctgaagttg 1081 || || || |||||||||||||| | ||||| ||| ||||| |||||||| |||||| || Sbjct: 1154 tcacgtgtctgccaagcagttctgagagataacacggtctccaaagatgtcctgaagctg 1213 Query: 1082 cgaggaaaagcattgaaaaaacttggaacgatattccaaggcgcaaaatctctctaccat 1141 |||| ||||| |||||||| || ||||||||||||||||||||||||||| | |||| | Sbjct: 1214 cgagcgaaagcgttgaaaaagctcggaacgatattccaaggcgcaaaatctatgtaccgt 1273 Query: 1142 cgcgagaacagcctacgcgt 1161 || || |||||||| ||||| Sbjct: 1274 cgtgaaaacagcctgcgcgt 1293
>gb|AY105051.1| Zea mays PCO110431 mRNA sequence Length = 1309 Score = 601 bits (303), Expect = e-168 Identities = 792/950 (83%), Gaps = 5/950 (0%) Strand = Plus / Plus Query: 182 gccatggtgaaggagaccgcctactacgaaaccctgggggtcagcgtcgacgcctccccc 241 |||||||||||||| | |||||||||||| ||||||| ||||||||||||| |||||| Sbjct: 221 gccatggtgaaggacagcgcctactacgatgtcctggggctcagcgtcgacgcgtccccc 280 Query: 242 tccgacatcaagaaggcatactacgtccaggccaggctggtgcacccggacaagaatccc 301 |||| ||||||||||| || ||| | |||| | ||||||||| ||||||||||||||| Sbjct: 281 gccgagatcaagaaggcgtattacattaaggcgaagctggtgcatccggacaagaatccc 340 Query: 302 ggcaaccccgacgcggcgcggaaattccaggatcttggagaggcctaccaagtcctaagc 361 || ||||| |||||||| | || |||||||| ||||||||||| || ||||||||||| Sbjct: 341 gggaaccctgacgcggcactcaagttccaggaacttggagaggcttatcaagtcctaagt 400 Query: 362 gatccagccaagaaggaggcttatgataagcatggaaaggagggcctttcccaggaaaac 421 ||||| | || |||||||| |||||||| ||||||||||||| || ||||||| ||| Sbjct: 401 gatcctgggaaaaaggaggcgtatgataattatggaaaggagggtattccccaggataac 460 Query: 422 atggtcgatcccgctgctgtctttgggatgctttttggaagcgactattttgaagactat 481 ||||| ||||| ||||||||||||||||||||||||||||| |||||||||||||| || Sbjct: 461 atggtggatcctgctgctgtctttgggatgctttttggaagtgactattttgaagattac 520 Query: 482 gttggtcagcttgctctggcatccatagcttcagtggaggttgatgaaggtttaagcagt 541 ||||| ||||||||||| ||||| |||||||||||||||||||| ||| | || ||| Sbjct: 521 gttggccagcttgctctagcatctatagcttcagtggaggttgaggaaaactcaaatagt 580 Query: 542 caagacgccagagcaaaggttcaagagaaaataaaagggttgcaaacagaaagagagcaa 601 ||||| || |||||||| |||||||| || ||||||| ||| |||| |||||||| ||| Sbjct: 581 caagaggcaagagcaaaagttcaagaaaagataaaagagttacaaagggaaagagaacaa 640 Query: 602 aagcttactcagagcctaaaggatcgacttcagccatatgtggatggtagaaaggatgat 661 |||||||||||||| || ||||| |||||||| ||||||| ||||| ||||| ||||| Sbjct: 641 aagcttactcagagtctgaaggaccgacttcaatcatatgtagatgggagaaatgatgaa 700 Query: 662 tttgtgcactgggcgaatgcagaagctaagcgtttatctgaagcagcttttggtgaggct 721 |||||| || || | |||||||||| ||||||||| |||||||| ||||| |||||| Sbjct: 701 tttgtgagctatgcaagcgcagaagctaggcgtttatccgaagcagcatttggcgaggct 760 Query: 722 atgcttcacactgttggatatatttatgtacggcaagcgtcaagagaacttggaaagagt 781 ||||||||||| |||| ||||||||||| |||||||| |||||||||| || || ||| Sbjct: 761 atgcttcacaccattggttatatttatgtccggcaagcagcaagagaactcgggaaaagt 820 Query: 782 aaattgtatatgggtgtaccattcatagctgagtgggtaagagacaagggtcacaccatt 841 | | | || ||||||||||| || |||||||| ||||| |||||||| || ||| |||| Sbjct: 821 agaatttacatgggtgtaccttttatagctgaatgggttagagacaaaggacaccacatt 880 Query: 842 aaatcgcaagttcatgctgcttcaggtgctattgctctgatgcagctacaagatggaatg 901 ||||| || ||| |||||||||||||||||||| |||| || || || ||||| || ||| Sbjct: 881 aaatcacaggttaatgctgcttcaggtgctatttctctaatacaacttcaagaagggatg 940 Query: 902 aaaaaggtggaggagggtgccaataaggaagaacagcttatgaagagttttgaggagaaa 961 |||||| |||||| | ||| | | || || || |||||||||||||||||||||||| Sbjct: 941 aaaaagatggaggggagtgaggacagcgaggagcaacttatgaagagttttgaggagaaa 1000 Query: 962 aaggaagccatgcttaattctctat-ggaaaattaatgtggttgatatcgagtcaactct 1020 || || |||||||| | || || | ||||||| |||||||||||||||||||| || || Sbjct: 1001 aaagatgccatgctcagctcgctttgggaaaatcaatgtggttgatatcgagtccacgct 1060 Query: 1021 ttcccgagtatgccaagcagttct-taaagatagcactgtctcaaaagatgttct-gaag 1078 || || || |||||||||||||| | |||||||| ||||| |||||||| || |||| Sbjct: 1061 ctcacgtgtctgccaagcagttctggagagatagcatggtctccaaagatgtcctggaag 1120 Query: 1079 ttgcgaggaaaagcattgaaaaaactt--ggaacgatattccaaggcgca 1126 |||||| ||||| ||| ||||| | ||||||||||||||||||||| Sbjct: 1121 ctgcgagccaaagcgttggaaaaagctcgggaacgatattccaaggcgca 1170
>gb|AC098833.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1288_A07, complete sequence Length = 122120 Score = 167 bits (84), Expect = 1e-37 Identities = 144/164 (87%) Strand = Plus / Minus Query: 705 cagcttttggtgaggctatgcttcacactgttggatatatttatgtacggcaagcgtcaa 764 |||||||||| ||||||||||| |||| |||| ||||||||||| || ||||| | | Sbjct: 67880 cagcttttggcgaggctatgctcaccactattggctatatttatgtgcgacaagcagcga 67821 Query: 765 gagaacttggaaagagtaaattgtatatgggtgtaccattcatagctgagtgggtaagag 824 ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||| Sbjct: 67820 gagaacttggaaagagtaagttgtatatgggtgtaccattcatagctgagtgggtcagag 67761 Query: 825 acaagggtcacaccattaaatcgcaagttcatgctgcttcaggt 868 ||||||| ||| ||||||||| || ||| |||| ||||||||| Sbjct: 67760 acaagggccactgcattaaatcacaggttaatgccgcttcaggt 67717 Score = 167 bits (84), Expect = 1e-37 Identities = 141/160 (88%) Strand = Plus / Minus Query: 419 aacatggtcgatcccgctgctgtctttgggatgctttttggaagcgactattttgaagac 478 |||||||| ||||| ||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 68544 aacatggtggatcctgctgctgtctttgggatgctttttggaagtgactattttgaagat 68485 Query: 479 tatgttggtcagcttgctctggcatccatagcttcagtggaggttgatgaaggtttaagc 538 |||||||| |||||||| |||||||||||||| |||||||| || || ||| |||| | Sbjct: 68484 tatgttggacagcttgcactggcatccatagcatcagtggaagtcgaggaaaacttaaac 68425 Query: 539 agtcaagacgccagagcaaaggttcaagagaaaataaaag 578 |||||||| || |||| ||||||||||||||||| |||| Sbjct: 68424 agtcaagaagcaagagggaaggttcaagagaaaattaaag 68385 Score = 163 bits (82), Expect = 2e-36 Identities = 154/178 (86%) Strand = Plus / Minus Query: 864 caggtgctattgctctgatgcagctacaagatggaatgaaaaaggtggaggagggtgcca 923 |||| ||||| |||||||||||||||||||| || ||||||||| ||||||| ||| || Sbjct: 67644 caggcgctatcgctctgatgcagctacaagaagggatgaaaaagatggaggaaagtgaca 67585 Query: 924 ataaggaagaacagcttatgaagagttttgaggagaaaaaggaagccatgcttaattctc 983 ||||||| || ||| ||||||||||||| ||||||||||| || |||||||||| || | Sbjct: 67584 ataaggaggaccagattatgaagagtttcgaggagaaaaaagatgccatgcttagttacc 67525 Query: 984 tatggaaaattaatgtggttgatatcgagtcaactctttcccgagtatgccaagcagt 1041 ||||||||||||||||||||||||| |||||||| ||| | | || ||||||||||| Sbjct: 67524 tatggaaaattaatgtggttgatattgagtcaacacttacacatgtttgccaagcagt 67467 Score = 105 bits (53), Expect = 4e-19 Identities = 71/77 (92%) Strand = Plus / Minus Query: 182 gccatggtgaaggagaccgcctactacgaaaccctgggggtcagcgtcgacgcctccccc 241 |||||||||||||| ||||| |||||||| ||||||||||||||||| |||||||||||| Sbjct: 69847 gccatggtgaaggataccgcgtactacgacaccctgggggtcagcgtggacgcctccccc 69788 Query: 242 tccgacatcaagaaggc 258 |||| ||||||||||| Sbjct: 69787 gccgagatcaagaaggc 69771 Score = 95.6 bits (48), Expect = 4e-16 Identities = 99/116 (85%) Strand = Plus / Minus Query: 584 caaacagaaagagagcaaaagcttactcagagcctaaaggatcgacttcagccatatgtg 643 |||| ||||||||| || ||||||| |||||||||||| ||||||||||| |||| |||| Sbjct: 68261 caaaaagaaagagaacagaagcttattcagagcctaaaagatcgacttcaaccatttgtg 68202 Query: 644 gatggtagaaaggatgattttgtgcactgggcgaatgcagaagctaagcgtttatc 699 |||| ||||||||||| ||||| ||||||| |||| |||||| |||| ||||| Sbjct: 68201 gatgagagaaaggatgaatttgttaactgggcaaatggggaagctcagcggttatc 68146 Score = 77.8 bits (39), Expect = 1e-10 Identities = 57/63 (90%) Strand = Plus / Minus Query: 1057 tgtctcaaaagatgttctgaagttgcgaggaaaagcattgaaaaaacttggaacgatatt 1116 |||| ||||||||||||||||||| |||| || |||||||||||| ||||| |||||||| Sbjct: 67326 tgtcccaaaagatgttctgaagttacgagcaagagcattgaaaaagcttgggacgatatt 67267 Query: 1117 cca 1119 ||| Sbjct: 67266 cca 67264 Score = 73.8 bits (37), Expect = 2e-09 Identities = 67/77 (87%) Strand = Plus / Minus Query: 329 caggatcttggagaggcctaccaagtcctaagcgatccagccaagaaggaggcttatgat 388 ||||| || |||||||| |||||||| |||||||||| | || | ||||||||||||| Sbjct: 69051 caggaactcggagaggcataccaagttttaagcgatccttcaaaaagggaggcttatgat 68992 Query: 389 aagcatggaaaggaggg 405 ||||||||||||||||| Sbjct: 68991 aagcatggaaaggaggg 68975 Score = 60.0 bits (30), Expect = 2e-05 Identities = 57/66 (86%) Strand = Plus / Minus Query: 267 tccaggccaggctggtgcacccggacaagaatcccggcaaccccgacgcggcgcggaaat 326 ||||||| | || |||||| |||||||||||||| || |||||||| ||||||| ||||| Sbjct: 69608 tccaggcgaagcaggtgcatccggacaagaatcctgggaaccccgatgcggcgcagaaat 69549 Query: 327 tccagg 332 | |||| Sbjct: 69548 ttcagg 69543
>gb|AC118285.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1206_C08, complete sequence Length = 115026 Score = 167 bits (84), Expect = 1e-37 Identities = 144/164 (87%) Strand = Plus / Minus Query: 705 cagcttttggtgaggctatgcttcacactgttggatatatttatgtacggcaagcgtcaa 764 |||||||||| ||||||||||| |||| |||| ||||||||||| || ||||| | | Sbjct: 24181 cagcttttggcgaggctatgctcaccactattggctatatttatgtgcgacaagcagcga 24122 Query: 765 gagaacttggaaagagtaaattgtatatgggtgtaccattcatagctgagtgggtaagag 824 ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||| Sbjct: 24121 gagaacttggaaagagtaagttgtatatgggtgtaccattcatagctgagtgggtcagag 24062 Query: 825 acaagggtcacaccattaaatcgcaagttcatgctgcttcaggt 868 ||||||| ||| ||||||||| || ||| |||| ||||||||| Sbjct: 24061 acaagggccactgcattaaatcacaggttaatgccgcttcaggt 24018 Score = 167 bits (84), Expect = 1e-37 Identities = 141/160 (88%) Strand = Plus / Minus Query: 419 aacatggtcgatcccgctgctgtctttgggatgctttttggaagcgactattttgaagac 478 |||||||| ||||| ||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 24845 aacatggtggatcctgctgctgtctttgggatgctttttggaagtgactattttgaagat 24786 Query: 479 tatgttggtcagcttgctctggcatccatagcttcagtggaggttgatgaaggtttaagc 538 |||||||| |||||||| |||||||||||||| |||||||| || || ||| |||| | Sbjct: 24785 tatgttggacagcttgcactggcatccatagcatcagtggaagtcgaggaaaacttaaac 24726 Query: 539 agtcaagacgccagagcaaaggttcaagagaaaataaaag 578 |||||||| || |||| ||||||||||||||||| |||| Sbjct: 24725 agtcaagaagcaagagggaaggttcaagagaaaattaaag 24686 Score = 163 bits (82), Expect = 2e-36 Identities = 154/178 (86%) Strand = Plus / Minus Query: 864 caggtgctattgctctgatgcagctacaagatggaatgaaaaaggtggaggagggtgcca 923 |||| ||||| |||||||||||||||||||| || ||||||||| ||||||| ||| || Sbjct: 23945 caggcgctatcgctctgatgcagctacaagaagggatgaaaaagatggaggaaagtgaca 23886 Query: 924 ataaggaagaacagcttatgaagagttttgaggagaaaaaggaagccatgcttaattctc 983 ||||||| || ||| ||||||||||||| ||||||||||| || |||||||||| || | Sbjct: 23885 ataaggaggaccagattatgaagagtttcgaggagaaaaaagatgccatgcttagttacc 23826 Query: 984 tatggaaaattaatgtggttgatatcgagtcaactctttcccgagtatgccaagcagt 1041 ||||||||||||||||||||||||| |||||||| ||| | | || ||||||||||| Sbjct: 23825 tatggaaaattaatgtggttgatattgagtcaacacttacacatgtttgccaagcagt 23768 Score = 105 bits (53), Expect = 4e-19 Identities = 71/77 (92%) Strand = Plus / Minus Query: 182 gccatggtgaaggagaccgcctactacgaaaccctgggggtcagcgtcgacgcctccccc 241 |||||||||||||| ||||| |||||||| ||||||||||||||||| |||||||||||| Sbjct: 26148 gccatggtgaaggataccgcgtactacgacaccctgggggtcagcgtggacgcctccccc 26089 Query: 242 tccgacatcaagaaggc 258 |||| ||||||||||| Sbjct: 26088 gccgagatcaagaaggc 26072 Score = 95.6 bits (48), Expect = 4e-16 Identities = 99/116 (85%) Strand = Plus / Minus Query: 584 caaacagaaagagagcaaaagcttactcagagcctaaaggatcgacttcagccatatgtg 643 |||| ||||||||| || ||||||| |||||||||||| ||||||||||| |||| |||| Sbjct: 24562 caaaaagaaagagaacagaagcttattcagagcctaaaagatcgacttcaaccatttgtg 24503 Query: 644 gatggtagaaaggatgattttgtgcactgggcgaatgcagaagctaagcgtttatc 699 |||| ||||||||||| ||||| ||||||| |||| |||||| |||| ||||| Sbjct: 24502 gatgagagaaaggatgaatttgttaactgggcaaatggggaagctcagcggttatc 24447 Score = 77.8 bits (39), Expect = 1e-10 Identities = 57/63 (90%) Strand = Plus / Minus Query: 1057 tgtctcaaaagatgttctgaagttgcgaggaaaagcattgaaaaaacttggaacgatatt 1116 |||| ||||||||||||||||||| |||| || |||||||||||| ||||| |||||||| Sbjct: 23627 tgtcccaaaagatgttctgaagttacgagcaagagcattgaaaaagcttgggacgatatt 23568 Query: 1117 cca 1119 ||| Sbjct: 23567 cca 23565 Score = 73.8 bits (37), Expect = 2e-09 Identities = 67/77 (87%) Strand = Plus / Minus Query: 329 caggatcttggagaggcctaccaagtcctaagcgatccagccaagaaggaggcttatgat 388 ||||| || |||||||| |||||||| |||||||||| | || | ||||||||||||| Sbjct: 25352 caggaactcggagaggcataccaagttttaagcgatccttcaaaaagggaggcttatgat 25293 Query: 389 aagcatggaaaggaggg 405 ||||||||||||||||| Sbjct: 25292 aagcatggaaaggaggg 25276 Score = 60.0 bits (30), Expect = 2e-05 Identities = 57/66 (86%) Strand = Plus / Minus Query: 267 tccaggccaggctggtgcacccggacaagaatcccggcaaccccgacgcggcgcggaaat 326 ||||||| | || |||||| |||||||||||||| || |||||||| ||||||| ||||| Sbjct: 25909 tccaggcgaagcaggtgcatccggacaagaatcctgggaaccccgatgcggcgcagaaat 25850 Query: 327 tccagg 332 | |||| Sbjct: 25849 ttcagg 25844
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5 Length = 29737217 Score = 167 bits (84), Expect = 1e-37 Identities = 144/164 (87%) Strand = Plus / Minus Query: 705 cagcttttggtgaggctatgcttcacactgttggatatatttatgtacggcaagcgtcaa 764 |||||||||| ||||||||||| |||| |||| ||||||||||| || ||||| | | Sbjct: 26785941 cagcttttggcgaggctatgctcaccactattggctatatttatgtgcgacaagcagcga 26785882 Query: 765 gagaacttggaaagagtaaattgtatatgggtgtaccattcatagctgagtgggtaagag 824 ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||| Sbjct: 26785881 gagaacttggaaagagtaagttgtatatgggtgtaccattcatagctgagtgggtcagag 26785822 Query: 825 acaagggtcacaccattaaatcgcaagttcatgctgcttcaggt 868 ||||||| ||| ||||||||| || ||| |||| ||||||||| Sbjct: 26785821 acaagggccactgcattaaatcacaggttaatgccgcttcaggt 26785778 Score = 167 bits (84), Expect = 1e-37 Identities = 141/160 (88%) Strand = Plus / Minus Query: 419 aacatggtcgatcccgctgctgtctttgggatgctttttggaagcgactattttgaagac 478 |||||||| ||||| ||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 26786605 aacatggtggatcctgctgctgtctttgggatgctttttggaagtgactattttgaagat 26786546 Query: 479 tatgttggtcagcttgctctggcatccatagcttcagtggaggttgatgaaggtttaagc 538 |||||||| |||||||| |||||||||||||| |||||||| || || ||| |||| | Sbjct: 26786545 tatgttggacagcttgcactggcatccatagcatcagtggaagtcgaggaaaacttaaac 26786486 Query: 539 agtcaagacgccagagcaaaggttcaagagaaaataaaag 578 |||||||| || |||| ||||||||||||||||| |||| Sbjct: 26786485 agtcaagaagcaagagggaaggttcaagagaaaattaaag 26786446 Score = 163 bits (82), Expect = 2e-36 Identities = 154/178 (86%) Strand = Plus / Minus Query: 864 caggtgctattgctctgatgcagctacaagatggaatgaaaaaggtggaggagggtgcca 923 |||| ||||| |||||||||||||||||||| || ||||||||| ||||||| ||| || Sbjct: 26785705 caggcgctatcgctctgatgcagctacaagaagggatgaaaaagatggaggaaagtgaca 26785646 Query: 924 ataaggaagaacagcttatgaagagttttgaggagaaaaaggaagccatgcttaattctc 983 ||||||| || ||| ||||||||||||| ||||||||||| || |||||||||| || | Sbjct: 26785645 ataaggaggaccagattatgaagagtttcgaggagaaaaaagatgccatgcttagttacc 26785586 Query: 984 tatggaaaattaatgtggttgatatcgagtcaactctttcccgagtatgccaagcagt 1041 ||||||||||||||||||||||||| |||||||| ||| | | || ||||||||||| Sbjct: 26785585 tatggaaaattaatgtggttgatattgagtcaacacttacacatgtttgccaagcagt 26785528 Score = 105 bits (53), Expect = 4e-19 Identities = 71/77 (92%) Strand = Plus / Minus Query: 182 gccatggtgaaggagaccgcctactacgaaaccctgggggtcagcgtcgacgcctccccc 241 |||||||||||||| ||||| |||||||| ||||||||||||||||| |||||||||||| Sbjct: 26787908 gccatggtgaaggataccgcgtactacgacaccctgggggtcagcgtggacgcctccccc 26787849 Query: 242 tccgacatcaagaaggc 258 |||| ||||||||||| Sbjct: 26787848 gccgagatcaagaaggc 26787832 Score = 95.6 bits (48), Expect = 4e-16 Identities = 99/116 (85%) Strand = Plus / Minus Query: 584 caaacagaaagagagcaaaagcttactcagagcctaaaggatcgacttcagccatatgtg 643 |||| ||||||||| || ||||||| |||||||||||| ||||||||||| |||| |||| Sbjct: 26786322 caaaaagaaagagaacagaagcttattcagagcctaaaagatcgacttcaaccatttgtg 26786263 Query: 644 gatggtagaaaggatgattttgtgcactgggcgaatgcagaagctaagcgtttatc 699 |||| ||||||||||| ||||| ||||||| |||| |||||| |||| ||||| Sbjct: 26786262 gatgagagaaaggatgaatttgttaactgggcaaatggggaagctcagcggttatc 26786207 Score = 77.8 bits (39), Expect = 1e-10 Identities = 57/63 (90%) Strand = Plus / Minus Query: 1057 tgtctcaaaagatgttctgaagttgcgaggaaaagcattgaaaaaacttggaacgatatt 1116 |||| ||||||||||||||||||| |||| || |||||||||||| ||||| |||||||| Sbjct: 26785387 tgtcccaaaagatgttctgaagttacgagcaagagcattgaaaaagcttgggacgatatt 26785328 Query: 1117 cca 1119 ||| Sbjct: 26785327 cca 26785325 Score = 73.8 bits (37), Expect = 2e-09 Identities = 67/77 (87%) Strand = Plus / Minus Query: 329 caggatcttggagaggcctaccaagtcctaagcgatccagccaagaaggaggcttatgat 388 ||||| || |||||||| |||||||| |||||||||| | || | ||||||||||||| Sbjct: 26787112 caggaactcggagaggcataccaagttttaagcgatccttcaaaaagggaggcttatgat 26787053 Query: 389 aagcatggaaaggaggg 405 ||||||||||||||||| Sbjct: 26787052 aagcatggaaaggaggg 26787036 Score = 60.0 bits (30), Expect = 2e-05 Identities = 57/66 (86%) Strand = Plus / Minus Query: 267 tccaggccaggctggtgcacccggacaagaatcccggcaaccccgacgcggcgcggaaat 326 ||||||| | || |||||| |||||||||||||| || |||||||| ||||||| ||||| Sbjct: 26787669 tccaggcgaagcaggtgcatccggacaagaatcctgggaaccccgatgcggcgcagaaat 26787610 Query: 327 tccagg 332 | |||| Sbjct: 26787609 ttcagg 26787604
>gb|AF111710.1|AF111710 Oryza sativa subsp. indica putative dnaJ-like protein, putative myb-related protein, putative farnesyl pyrophosphate synthase, and hypothetical protein genes, complete cds Length = 43422 Score = 167 bits (84), Expect = 1e-37 Identities = 144/164 (87%) Strand = Plus / Plus Query: 705 cagcttttggtgaggctatgcttcacactgttggatatatttatgtacggcaagcgtcaa 764 |||||||||| ||||||||||| |||| |||| ||||||||||| || ||||| | | Sbjct: 8135 cagcttttggcgaggctatgctcaccactattggctatatttatgtgcgacaagcagcga 8194 Query: 765 gagaacttggaaagagtaaattgtatatgggtgtaccattcatagctgagtgggtaagag 824 ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||| Sbjct: 8195 gagaacttggaaagagtaagttgtatatgggtgtaccattcatagctgagtgggtcagag 8254 Query: 825 acaagggtcacaccattaaatcgcaagttcatgctgcttcaggt 868 ||||||| ||| ||||||||| || ||| |||| ||||||||| Sbjct: 8255 acaagggccactgcattaaatcacaggttaatgccgcttcaggt 8298 Score = 163 bits (82), Expect = 2e-36 Identities = 154/178 (86%) Strand = Plus / Plus Query: 864 caggtgctattgctctgatgcagctacaagatggaatgaaaaaggtggaggagggtgcca 923 |||| ||||| |||||||||||||||||||| || ||||||||| ||||||| ||| || Sbjct: 8371 caggcgctatcgctctgatgcagctacaagaagggatgaaaaagatggaggaaagtgaca 8430 Query: 924 ataaggaagaacagcttatgaagagttttgaggagaaaaaggaagccatgcttaattctc 983 ||||||| || ||| ||||||||||||| ||||||||||| || |||||||||| || | Sbjct: 8431 ataaggaggaccagattatgaagagtttcgaggagaaaaaagatgccatgcttagttacc 8490 Query: 984 tatggaaaattaatgtggttgatatcgagtcaactctttcccgagtatgccaagcagt 1041 ||||||||||||||||||||||||| |||||||| ||| | | || ||||||||||| Sbjct: 8491 tatggaaaattaatgtggttgatattgagtcaacacttacacatgtttgccaagcagt 8548 Score = 151 bits (76), Expect = 8e-33 Identities = 139/160 (86%) Strand = Plus / Plus Query: 419 aacatggtcgatcccgctgctgtctttgggatgctttttggaagcgactattttgaagac 478 |||||||| ||||| ||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 7471 aacatggtggatcctgctgctgtctttgggatgctttttggaagtgactattttgaagat 7530 Query: 479 tatgttggtcagcttgctctggcatccatagcttcagtggaggttgatgaaggtttaagc 538 |||||||| || ||||| |||||||||||||| |||||||| || || ||| |||| | Sbjct: 7531 tatgttggacaacttgcactggcatccatagcatcagtggaagtcgaggaaaacttaaac 7590 Query: 539 agtcaagacgccagagcaaaggttcaagagaaaataaaag 578 ||||||| || |||| ||||||||||||||||| |||| Sbjct: 7591 ggtcaagaagcaagagggaaggttcaagagaaaattaaag 7630 Score = 105 bits (53), Expect = 4e-19 Identities = 71/77 (92%) Strand = Plus / Plus Query: 182 gccatggtgaaggagaccgcctactacgaaaccctgggggtcagcgtcgacgcctccccc 241 |||||||||||||| ||||| |||||||| ||||||||||||||||| |||||||||||| Sbjct: 6167 gccatggtgaaggataccgcgtactacgacaccctgggggtcagcgtggacgcctccccc 6226 Query: 242 tccgacatcaagaaggc 258 |||| ||||||||||| Sbjct: 6227 gccgagatcaagaaggc 6243 Score = 95.6 bits (48), Expect = 4e-16 Identities = 99/116 (85%) Strand = Plus / Plus Query: 584 caaacagaaagagagcaaaagcttactcagagcctaaaggatcgacttcagccatatgtg 643 |||| ||||||||| || ||||||| |||||||||||| ||||||||||| |||| |||| Sbjct: 7754 caaaaagaaagagaacagaagcttattcagagcctaaaagatcgacttcaaccatttgtg 7813 Query: 644 gatggtagaaaggatgattttgtgcactgggcgaatgcagaagctaagcgtttatc 699 |||| ||||||||||| ||||| ||||||| |||| |||||| |||| ||||| Sbjct: 7814 gatgagagaaaggatgaatttgttaactgggcaaatggggaagctcagcggttatc 7869 Score = 73.8 bits (37), Expect = 2e-09 Identities = 67/77 (87%) Strand = Plus / Plus Query: 329 caggatcttggagaggcctaccaagtcctaagcgatccagccaagaaggaggcttatgat 388 ||||| || |||||||| |||||||| |||||||||| | || | ||||||||||||| Sbjct: 6964 caggaactcggagaggcataccaagttttaagcgatccttcaaaaagggaggcttatgat 7023 Query: 389 aagcatggaaaggaggg 405 ||||||||||||||||| Sbjct: 7024 aagcatggaaaggaggg 7040 Score = 69.9 bits (35), Expect = 2e-08 Identities = 56/63 (88%) Strand = Plus / Plus Query: 1057 tgtctcaaaagatgttctgaagttgcgaggaaaagcattgaaaaaacttggaacgatatt 1116 |||| ||||||||||||||||||| |||| || |||||||||||| ||||| || ||||| Sbjct: 8689 tgtcccaaaagatgttctgaagttacgagcaagagcattgaaaaagcttgggacaatatt 8748 Query: 1117 cca 1119 ||| Sbjct: 8749 cca 8751 Score = 60.0 bits (30), Expect = 2e-05 Identities = 57/66 (86%) Strand = Plus / Plus Query: 267 tccaggccaggctggtgcacccggacaagaatcccggcaaccccgacgcggcgcggaaat 326 ||||||| | || |||||| |||||||||||||| || |||||||| ||||||| ||||| Sbjct: 6407 tccaggcgaagcaggtgcatccggacaagaatcctgggaaccccgatgcggcgcagaaat 6466 Query: 327 tccagg 332 | |||| Sbjct: 6467 ttcagg 6472
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 111 bits (56), Expect = 7e-21 Identities = 86/96 (89%) Strand = Plus / Plus Query: 435 ctgctgtctttgggatgctttttggaagcgactattttgaagactatgttggtcagcttg 494 ||||||||||||| ||||||||||| ||||||||||||||||| |||||||||||| ||| Sbjct: 29114414 ctgctgtctttggaatgctttttgggagcgactattttgaagattatgttggtcagtttg 29114473 Query: 495 ctctggcatccatagcttcagtggaggttgatgaag 530 | |||||||| |||||||||| ||| |||| |||| Sbjct: 29114474 cactggcatctgtagcttcagtagagattgaggaag 29114509 Score = 109 bits (55), Expect = 3e-20 Identities = 109/127 (85%) Strand = Plus / Plus Query: 705 cagcttttggtgaggctatgcttcacactgttggatatatttatgtacggcaagcgtcaa 764 ||||||| |||||||||||||| |||||| |||| || ||||||| || ||||| ||| Sbjct: 29115013 cagctttcggtgaggctatgctccacactattggctacatttatgctcgtcaagcagcaa 29115072 Query: 765 gagaacttggaaagagtaaattgtatatgggtgtaccattcatagctgagtgggtaagag 824 |||| |||||||| || ||| ||||||||||||| || ||||||||||| |||||||||| Sbjct: 29115073 gagagcttggaaaaagcaaaatgtatatgggtgtgccgttcatagctgaatgggtaagag 29115132 Query: 825 acaaggg 831 | ||||| Sbjct: 29115133 ataaggg 29115139 Score = 87.7 bits (44), Expect = 1e-13 Identities = 98/116 (84%) Strand = Plus / Plus Query: 926 aaggaagaacagcttatgaagagttttgaggagaaaaaggaagccatgcttaattctcta 985 ||||||| ||||||||||||||| ||||||||||||| || || ||| | |||||||| Sbjct: 29115351 aaggaaggccagcttatgaagagtattgaggagaaaaaagacgcaatgttgaattctctg 29115410 Query: 986 tggaaaattaatgtggttgatatcgagtcaactctttcccgagtatgccaagcagt 1041 |||||||| ||||| || ||||| || ||||| ||||| || || ||||||||||| Sbjct: 29115411 tggaaaatcaatgtagtcgatattgaatcaacgctttctcgtgtttgccaagcagt 29115466 Score = 81.8 bits (41), Expect = 6e-12 Identities = 62/69 (89%) Strand = Plus / Plus Query: 580 gttgcaaacagaaagagagcaaaagcttactcagagcctaaaggatcgacttcagccata 639 ||||||||| |||||||||||||||||| ||| ||||| |||||||||||||| ||||| Sbjct: 29114697 gttgcaaaccgaaagagagcaaaagcttgttcaaagccttaaggatcgacttcaaccata 29114756 Query: 640 tgtggatgg 648 ||| ||||| Sbjct: 29114757 tgttgatgg 29114765
>dbj|AP003245.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0421H07 Length = 158126 Score = 111 bits (56), Expect = 7e-21 Identities = 86/96 (89%) Strand = Plus / Plus Query: 435 ctgctgtctttgggatgctttttggaagcgactattttgaagactatgttggtcagcttg 494 ||||||||||||| ||||||||||| ||||||||||||||||| |||||||||||| ||| Sbjct: 74780 ctgctgtctttggaatgctttttgggagcgactattttgaagattatgttggtcagtttg 74839 Query: 495 ctctggcatccatagcttcagtggaggttgatgaag 530 | |||||||| |||||||||| ||| |||| |||| Sbjct: 74840 cactggcatctgtagcttcagtagagattgaggaag 74875 Score = 109 bits (55), Expect = 3e-20 Identities = 109/127 (85%) Strand = Plus / Plus Query: 705 cagcttttggtgaggctatgcttcacactgttggatatatttatgtacggcaagcgtcaa 764 ||||||| |||||||||||||| |||||| |||| || ||||||| || ||||| ||| Sbjct: 75379 cagctttcggtgaggctatgctccacactattggctacatttatgctcgtcaagcagcaa 75438 Query: 765 gagaacttggaaagagtaaattgtatatgggtgtaccattcatagctgagtgggtaagag 824 |||| |||||||| || ||| ||||||||||||| || ||||||||||| |||||||||| Sbjct: 75439 gagagcttggaaaaagcaaaatgtatatgggtgtgccgttcatagctgaatgggtaagag 75498 Query: 825 acaaggg 831 | ||||| Sbjct: 75499 ataaggg 75505 Score = 87.7 bits (44), Expect = 1e-13 Identities = 98/116 (84%) Strand = Plus / Plus Query: 926 aaggaagaacagcttatgaagagttttgaggagaaaaaggaagccatgcttaattctcta 985 ||||||| ||||||||||||||| ||||||||||||| || || ||| | |||||||| Sbjct: 75717 aaggaaggccagcttatgaagagtattgaggagaaaaaagacgcaatgttgaattctctg 75776 Query: 986 tggaaaattaatgtggttgatatcgagtcaactctttcccgagtatgccaagcagt 1041 |||||||| ||||| || ||||| || ||||| ||||| || || ||||||||||| Sbjct: 75777 tggaaaatcaatgtagtcgatattgaatcaacgctttctcgtgtttgccaagcagt 75832 Score = 81.8 bits (41), Expect = 6e-12 Identities = 62/69 (89%) Strand = Plus / Plus Query: 580 gttgcaaacagaaagagagcaaaagcttactcagagcctaaaggatcgacttcagccata 639 ||||||||| |||||||||||||||||| ||| ||||| |||||||||||||| ||||| Sbjct: 75063 gttgcaaaccgaaagagagcaaaagcttgttcaaagccttaaggatcgacttcaaccata 75122 Query: 640 tgtggatgg 648 ||| ||||| Sbjct: 75123 tgttgatgg 75131
>emb|CT985969.1| partial cDNA sequence from a Lambda ZAP II normalized full-length cDNA library of differentiating xylem from Eucalyptus gunnii Length = 694 Score = 83.8 bits (42), Expect = 2e-12 Identities = 87/102 (85%) Strand = Plus / Plus Query: 949 ttttgaggagaaaaaggaagccatgcttaattctctatggaaaattaatgtggttgatat 1008 |||||| || || ||||| |||||||||||||| || ||| |||||||||||||||| || Sbjct: 302 ttttgaagacaagaaggatgccatgcttaattcgctctggcaaattaatgtggttgacat 361 Query: 1009 cgagtcaactctttcccgagtatgccaagcagttcttaaaga 1050 ||||||||| | || | || |||||||||||||||||||| Sbjct: 362 cgagtcaaccttatcgcatgtttgccaagcagttcttaaaga 403
>emb|CT980502.1| partial cDNA sequence from a Lambda ZAP II normalized full-length cDNA library of differentiating xylem from Eucalyptus gunnii Length = 693 Score = 83.8 bits (42), Expect = 2e-12 Identities = 87/102 (85%) Strand = Plus / Plus Query: 949 ttttgaggagaaaaaggaagccatgcttaattctctatggaaaattaatgtggttgatat 1008 |||||| || || ||||| |||||||||||||| || ||| |||||||||||||||| || Sbjct: 302 ttttgaagacaagaaggatgccatgcttaattcgctctggcaaattaatgtggttgacat 361 Query: 1009 cgagtcaactctttcccgagtatgccaagcagttcttaaaga 1050 ||||||||| | || | || |||||||||||||||||||| Sbjct: 362 cgagtcaaccttatcgcatgtttgccaagcagttcttaaaga 403
>gb|AY112585.1| Zea mays CL2587_-2 mRNA sequence Length = 373 Score = 63.9 bits (32), Expect = 1e-06 Identities = 50/56 (89%) Strand = Plus / Minus Query: 1106 ggaacgatattccaaggcgcaaaatctctctaccatcgcgagaacagcctacgcgt 1161 ||||||||||||||||||||||||||| | |||| ||| || |||||||| ||||| Sbjct: 318 ggaacgatattccaaggcgcaaaatctatgtaccgtcgtgaaaacagcctgcgcgt 263
>gb|AY107498.1| Zea mays PCO134240 mRNA sequence Length = 692 Score = 61.9 bits (31), Expect = 6e-06 Identities = 49/55 (89%) Strand = Plus / Plus Query: 243 ccgacatcaagaaggcatactacgtccaggccaggctggtgcacccggacaagaa 297 |||| ||||||||||||||||||||| |||| |||| ||| || ||||||||||| Sbjct: 299 ccgagatcaagaaggcatactacgtcaaggcgaggcaggtccatccggacaagaa 353
>gb|AY108538.1| Zea mays PCO063014 mRNA sequence Length = 842 Score = 56.0 bits (28), Expect = 4e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 242 tccgacatcaagaaggcatactacgtccaggccaggctggtgcacccggacaagaa 297 ||||| ||||||||||| ||||||||| |||| |||||||| ||||| || ||||| Sbjct: 282 tccgagatcaagaaggcgtactacgtcaaggcgaggctggtccaccccgataagaa 337
>ref|XR_021687.1| PREDICTED: Pan troglodytes similar to HMGB3 protein (LOC747998), mRNA Length = 1536 Score = 50.1 bits (25), Expect = 0.022 Identities = 25/25 (100%) Strand = Plus / Minus Query: 58 tctcttcttcctcctcgtcttcttc 82 ||||||||||||||||||||||||| Sbjct: 601 tctcttcttcctcctcgtcttcttc 577
>ref|XM_939877.2| PREDICTED: Homo sapiens similar to high-mobility group box 3 (LOC646993), mRNA Length = 627 Score = 50.1 bits (25), Expect = 0.022 Identities = 25/25 (100%) Strand = Plus / Minus Query: 58 tctcttcttcctcctcgtcttcttc 82 ||||||||||||||||||||||||| Sbjct: 574 tctcttcttcctcctcgtcttcttc 550
>ref|XM_929965.2| PREDICTED: Homo sapiens similar to high-mobility group box 3 (LOC646993), mRNA Length = 627 Score = 50.1 bits (25), Expect = 0.022 Identities = 25/25 (100%) Strand = Plus / Minus Query: 58 tctcttcttcctcctcgtcttcttc 82 ||||||||||||||||||||||||| Sbjct: 574 tctcttcttcctcctcgtcttcttc 550
>emb|AL161792.29| Human DNA sequence from clone RP11-84P7 on chromosome 9 Contains a high-mobility group box pseudogene, two novel gene and the 3' end of the RNF38 gene for ring finger protein 38, complete sequence Length = 77027 Score = 50.1 bits (25), Expect = 0.022 Identities = 25/25 (100%) Strand = Plus / Plus Query: 58 tctcttcttcctcctcgtcttcttc 82 ||||||||||||||||||||||||| Sbjct: 13717 tctcttcttcctcctcgtcttcttc 13741
>emb|AL136094.13| Human DNA sequence from clone RP3-527B10 on chromosome 6q25.1-25.3 Contains a high mobility group (nonhistone chromosomal) protein 4 (HMG4) pseudogene, complete sequence Length = 156667 Score = 50.1 bits (25), Expect = 0.022 Identities = 25/25 (100%) Strand = Plus / Minus Query: 58 tctcttcttcctcctcgtcttcttc 82 ||||||||||||||||||||||||| Sbjct: 34868 tctcttcttcctcctcgtcttcttc 34844
>gb|AC149277.11| Mus musculus BAC clone RP24-213J23 from chromosome 7, complete sequence Length = 198579 Score = 50.1 bits (25), Expect = 0.022 Identities = 25/25 (100%) Strand = Plus / Minus Query: 59 ctcttcttcctcctcgtcttcttcc 83 ||||||||||||||||||||||||| Sbjct: 100990 ctcttcttcctcctcgtcttcttcc 100966
>emb|AL845487.5| Mouse DNA sequence from clone RP23-288M4 on chromosome 2, complete sequence Length = 120057 Score = 50.1 bits (25), Expect = 0.022 Identities = 25/25 (100%) Strand = Plus / Plus Query: 59 ctcttcttcctcctcgtcttcttcc 83 ||||||||||||||||||||||||| Sbjct: 66250 ctcttcttcctcctcgtcttcttcc 66274
>ref|XR_012185.1| PREDICTED: Macaca mulatta similar to high-mobility group box 3 (LOC710194), mRNA Length = 731 Score = 48.1 bits (24), Expect = 0.088 Identities = 24/24 (100%) Strand = Plus / Minus Query: 59 ctcttcttcctcctcgtcttcttc 82 |||||||||||||||||||||||| Sbjct: 677 ctcttcttcctcctcgtcttcttc 654
>gb|AE017348.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 8, complete sequence Length = 1194300 Score = 48.1 bits (24), Expect = 0.088 Identities = 27/28 (96%) Strand = Plus / Minus Query: 56 aatctcttcttcctcctcgtcttcttcc 83 ||||||||||||||||||||| |||||| Sbjct: 1020101 aatctcttcttcctcctcgtcctcttcc 1020074
>ref|XM_501147.1| Yarrowia lipolytica CLIB122, YALI0B20680g predicted mRNA Length = 2352 Score = 48.1 bits (24), Expect = 0.088 Identities = 24/24 (100%) Strand = Plus / Minus Query: 60 tcttcttcctcctcgtcttcttcc 83 |||||||||||||||||||||||| Sbjct: 2210 tcttcttcctcctcgtcttcttcc 2187
>ref|XM_572548.1| Cryptococcus neoformans var. neoformans JEC21 centromeric DNA binding protein (CNH00580) partial mRNA Length = 2384 Score = 48.1 bits (24), Expect = 0.088 Identities = 27/28 (96%) Strand = Plus / Minus Query: 56 aatctcttcttcctcctcgtcttcttcc 83 ||||||||||||||||||||| |||||| Sbjct: 2118 aatctcttcttcctcctcgtcctcttcc 2091
>ref|XM_572547.1| Cryptococcus neoformans var. neoformans JEC21 centromeric DNA binding protein (CNH00580) partial mRNA Length = 2305 Score = 48.1 bits (24), Expect = 0.088 Identities = 27/28 (96%) Strand = Plus / Minus Query: 56 aatctcttcttcctcctcgtcttcttcc 83 ||||||||||||||||||||| |||||| Sbjct: 2118 aatctcttcttcctcctcgtcctcttcc 2091
>gb|AC154341.2| Mus musculus BAC clone RP23-240C2 from 16, complete sequence Length = 163871 Score = 48.1 bits (24), Expect = 0.088 Identities = 27/28 (96%) Strand = Plus / Plus Query: 58 tctcttcttcctcctcgtcttcttcccc 85 |||||||||||||||| ||||||||||| Sbjct: 5581 tctcttcttcctcctcttcttcttcccc 5608
>emb|CR382128.1| Yarrowia lipolytica chromosome B of strain CLIB122 of Yarrowia lipolytica Length = 3066374 Score = 48.1 bits (24), Expect = 0.088 Identities = 24/24 (100%) Strand = Plus / Minus Query: 60 tcttcttcctcctcgtcttcttcc 83 |||||||||||||||||||||||| Sbjct: 2725191 tcttcttcctcctcgtcttcttcc 2725168
>ref|XM_001224084.1| Chaetomium globosum CBS 148.51 hypothetical protein (CHGG_04871) mRNA, complete cds Length = 1641 Score = 46.1 bits (23), Expect = 0.35 Identities = 26/27 (96%) Strand = Plus / Plus Query: 240 cctccgacatcaagaaggcatactacg 266 ||||||||||||||||||| ||||||| Sbjct: 278 cctccgacatcaagaaggcctactacg 304
>ref|NM_001068817.1| Oryza sativa (japonica cultivar-group) Os08g0522600 (Os08g0522600) mRNA, complete cds Length = 1782 Score = 46.1 bits (23), Expect = 0.35 Identities = 23/23 (100%) Strand = Plus / Plus Query: 176 gcggcggccatggtgaaggagac 198 ||||||||||||||||||||||| Sbjct: 259 gcggcggccatggtgaaggagac 281
>ref|NM_120075.3| Arabidopsis thaliana heat shock protein binding / unfolded protein binding (AT4G39150) mRNA, complete cds Length = 1235 Score = 46.1 bits (23), Expect = 0.35 Identities = 35/39 (89%) Strand = Plus / Plus Query: 709 ttttggtgaggctatgcttcacactgttggatatattta 747 |||||||||||| ||||||||||| ||||| || ||||| Sbjct: 579 ttttggtgaggcaatgcttcacacagttggttacattta 617
>ref|NM_101962.2| Arabidopsis thaliana heat shock protein binding / unfolded protein binding (AT1G21080) mRNA, complete cds Length = 1593 Score = 46.1 bits (23), Expect = 0.35 Identities = 29/31 (93%) Strand = Plus / Plus Query: 338 ggagaggcctaccaagtcctaagcgatccag 368 ||||||||||||||||| ||||| ||||||| Sbjct: 341 ggagaggcctaccaagtgctaagtgatccag 371
>gb|AY046050.1| Arabidopsis thaliana unknown protein (At1g21080) mRNA, complete cds Length = 1609 Score = 46.1 bits (23), Expect = 0.35 Identities = 29/31 (93%) Strand = Plus / Plus Query: 338 ggagaggcctaccaagtcctaagcgatccag 368 ||||||||||||||||| ||||| ||||||| Sbjct: 342 ggagaggcctaccaagtgctaagtgatccag 372
>ref|XM_811341.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053507049.179) partial mRNA Length = 3402 Score = 46.1 bits (23), Expect = 0.35 Identities = 23/23 (100%) Strand = Plus / Minus Query: 60 tcttcttcctcctcgtcttcttc 82 ||||||||||||||||||||||| Sbjct: 1892 tcttcttcctcctcgtcttcttc 1870
>gb|AY093743.1| Arabidopsis thaliana AT4g39150/T22F8_50 mRNA, complete cds Length = 1038 Score = 46.1 bits (23), Expect = 0.35 Identities = 35/39 (89%) Strand = Plus / Plus Query: 709 ttttggtgaggctatgcttcacactgttggatatattta 747 |||||||||||| ||||||||||| ||||| || ||||| Sbjct: 528 ttttggtgaggcaatgcttcacacagttggttacattta 566
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8 Length = 28434780 Score = 46.1 bits (23), Expect = 0.35 Identities = 23/23 (100%) Strand = Plus / Plus Query: 176 gcggcggccatggtgaaggagac 198 ||||||||||||||||||||||| Sbjct: 25972487 gcggcggccatggtgaaggagac 25972509
>gb|AY065033.1| Arabidopsis thaliana AT4g39150/T22F8_50 mRNA, complete cds Length = 1234 Score = 46.1 bits (23), Expect = 0.35 Identities = 35/39 (89%) Strand = Plus / Plus Query: 709 ttttggtgaggctatgcttcacactgttggatatattta 747 |||||||||||| ||||||||||| ||||| || ||||| Sbjct: 579 ttttggtgaggcaatgcttcacacagttggttacattta 617
>ref|XM_690273.1| PREDICTED: Danio rerio similar to somatostatin receptor type 3 (LOC566989), mRNA Length = 1893 Score = 46.1 bits (23), Expect = 0.35 Identities = 23/23 (100%) Strand = Plus / Minus Query: 60 tcttcttcctcctcgtcttcttc 82 ||||||||||||||||||||||| Sbjct: 1151 tcttcttcctcctcgtcttcttc 1129
>gb|AY057531.1| Arabidopsis thaliana At1g21080/T22I11_9 mRNA, complete cds Length = 1463 Score = 46.1 bits (23), Expect = 0.35 Identities = 29/31 (93%) Strand = Plus / Plus Query: 338 ggagaggcctaccaagtcctaagcgatccag 368 ||||||||||||||||| ||||| ||||||| Sbjct: 211 ggagaggcctaccaagtgctaagtgatccag 241
>emb|AL161594.2|ATCHRIV90 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 90 Length = 198987 Score = 46.1 bits (23), Expect = 0.35 Identities = 35/39 (89%) Strand = Plus / Minus Query: 709 ttttggtgaggctatgcttcacactgttggatatattta 747 |||||||||||| ||||||||||| ||||| || ||||| Sbjct: 148611 ttttggtgaggcaatgcttcacacagttggttacattta 148573
>emb|AL050351.1|ATT22F8 Arabidopsis thaliana DNA chromosome 4, BAC clone T22F8 (ESSA project) Length = 89035 Score = 46.1 bits (23), Expect = 0.35 Identities = 35/39 (89%) Strand = Plus / Minus Query: 709 ttttggtgaggctatgcttcacactgttggatatattta 747 |||||||||||| ||||||||||| ||||| || ||||| Sbjct: 17147 ttttggtgaggcaatgcttcacacagttggttacattta 17109
>emb|AL806524.10| Mouse DNA sequence from clone RP23-158E10 on chromosome 4, complete sequence Length = 211513 Score = 46.1 bits (23), Expect = 0.35 Identities = 26/27 (96%) Strand = Plus / Plus Query: 59 ctcttcttcctcctcgtcttcttcccc 85 ||||||||||||||| ||||||||||| Sbjct: 138517 ctcttcttcctcctcctcttcttcccc 138543
>dbj|AP003887.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1186_G01 Length = 112077 Score = 46.1 bits (23), Expect = 0.35 Identities = 23/23 (100%) Strand = Plus / Plus Query: 176 gcggcggccatggtgaaggagac 198 ||||||||||||||||||||||| Sbjct: 8048 gcggcggccatggtgaaggagac 8070
>dbj|AP003865.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1081_B12 Length = 124741 Score = 46.1 bits (23), Expect = 0.35 Identities = 23/23 (100%) Strand = Plus / Plus Query: 176 gcggcggccatggtgaaggagac 198 ||||||||||||||||||||||| Sbjct: 57364 gcggcggccatggtgaaggagac 57386
>ref|XM_956693.1| Neurospora crassa OR74A hypothetical protein (NCU07897.1) partial mRNA Length = 1077 Score = 46.1 bits (23), Expect = 0.35 Identities = 23/23 (100%) Strand = Plus / Minus Query: 59 ctcttcttcctcctcgtcttctt 81 ||||||||||||||||||||||| Sbjct: 150 ctcttcttcctcctcgtcttctt 128
>gb|AC012190.3|T22I11 Arabidopsis thaliana chromosome 1 BAC T22I11 sequence, complete sequence Length = 68986 Score = 46.1 bits (23), Expect = 0.35 Identities = 29/31 (93%) Strand = Plus / Plus Query: 338 ggagaggcctaccaagtcctaagcgatccag 368 ||||||||||||||||| ||||| ||||||| Sbjct: 35483 ggagaggcctaccaagtgctaagtgatccag 35513
>dbj|AK105364.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-119-E12, full insert sequence Length = 1782 Score = 46.1 bits (23), Expect = 0.35 Identities = 23/23 (100%) Strand = Plus / Plus Query: 176 gcggcggccatggtgaaggagac 198 ||||||||||||||||||||||| Sbjct: 259 gcggcggccatggtgaaggagac 281
>gb|AY725776.1| Brassica juncea DnaJ-like protein (DnaJ1) mRNA, complete cds Length = 1538 Score = 46.1 bits (23), Expect = 0.35 Identities = 29/31 (93%) Strand = Plus / Plus Query: 338 ggagaggcctaccaagtcctaagcgatccag 368 ||||||||||||||||| || |||||||||| Sbjct: 272 ggagaggcctaccaagtgctgagcgatccag 302
>emb|BX571960.6| Zebrafish DNA sequence from clone DKEY-165I8 in linkage group 3, complete sequence Length = 192501 Score = 46.1 bits (23), Expect = 0.35 Identities = 23/23 (100%) Strand = Plus / Plus Query: 60 tcttcttcctcctcgtcttcttc 82 ||||||||||||||||||||||| Sbjct: 58055 tcttcttcctcctcgtcttcttc 58077
>emb|BX827447.1|CNS0A4B5 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS56ZC08 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1323 Score = 46.1 bits (23), Expect = 0.35 Identities = 35/39 (89%) Strand = Plus / Plus Query: 709 ttttggtgaggctatgcttcacactgttggatatattta 747 |||||||||||| ||||||||||| ||||| || ||||| Sbjct: 562 ttttggtgaggcaatgcttcacacagttggttacattta 600
>emb|BX826756.1|CNS0A45S Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB60ZF10 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1260 Score = 46.1 bits (23), Expect = 0.35 Identities = 35/39 (89%) Strand = Plus / Plus Query: 709 ttttggtgaggctatgcttcacactgttggatatattta 747 |||||||||||| ||||||||||| ||||| || ||||| Sbjct: 622 ttttggtgaggcaatgcttcacacagttggttacattta 660
>emb|BX828276.1|CNS0A3SO Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH70ZD02 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1229 Score = 46.1 bits (23), Expect = 0.35 Identities = 35/39 (89%) Strand = Plus / Plus Query: 709 ttttggtgaggctatgcttcacactgttggatatattta 747 |||||||||||| ||||||||||| ||||| || ||||| Sbjct: 622 ttttggtgaggcaatgcttcacacagttggttacattta 660
>gb|AC154617.3| Mus musculus BAC clone RP23-319O17 from chromosome 17, complete sequence Length = 197515 Score = 46.1 bits (23), Expect = 0.35 Identities = 23/23 (100%) Strand = Plus / Plus Query: 60 tcttcttcctcctcgtcttcttc 82 ||||||||||||||||||||||| Sbjct: 188641 tcttcttcctcctcgtcttcttc 188663
>gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 complete genome Length = 6397126 Score = 46.1 bits (23), Expect = 0.35 Identities = 23/23 (100%) Strand = Plus / Plus Query: 1271 tggcaccgcaggtttgctctcga 1293 ||||||||||||||||||||||| Sbjct: 369847 tggcaccgcaggtttgctctcga 369869
>gb|DQ249362.1| Daphnia pulex microsatellite Dp887 sequence Length = 207 Score = 46.1 bits (23), Expect = 0.35 Identities = 23/23 (100%) Strand = Plus / Minus Query: 60 tcttcttcctcctcgtcttcttc 82 ||||||||||||||||||||||| Sbjct: 153 tcttcttcctcctcgtcttcttc 131
>gb|CP000463.1| Rhodopseudomonas palustris BisA53, complete genome Length = 5505494 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Minus Query: 283 gcacccggacaagaatcccggc 304 |||||||||||||||||||||| Sbjct: 386162 gcacccggacaagaatcccggc 386141
>ref|NM_001053659.1| Oryza sativa (japonica cultivar-group) Os02g0555700 (Os02g0555700) mRNA, complete cds Length = 1722 Score = 44.1 bits (22), Expect = 1.4 Identities = 28/30 (93%) Strand = Plus / Plus Query: 322 gaaattccaggatcttggagaggcctacca 351 ||||||||||| ||| |||||||||||||| Sbjct: 432 gaaattccaggctctcggagaggcctacca 461
>ref|XR_020200.1| PREDICTED: Pan troglodytes hypothetical protein LOC736840 (LOC736840), mRNA Length = 445 Score = 44.1 bits (22), Expect = 1.4 Identities = 25/26 (96%) Strand = Plus / Minus Query: 60 tcttcttcctcctcgtcttcttcccc 85 |||||||||||||||||||| ||||| Sbjct: 295 tcttcttcctcctcgtcttcctcccc 270
>ref|XR_020986.1| PREDICTED: Pan troglodytes similar to Prothymosin, alpha (gene sequence 28) (LOC739256), mRNA Length = 462 Score = 44.1 bits (22), Expect = 1.4 Identities = 25/26 (96%) Strand = Plus / Minus Query: 60 tcttcttcctcctcgtcttcttcccc 85 |||||||||||||||||||| ||||| Sbjct: 287 tcttcttcctcctcgtcttcctcccc 262
>ref|NM_001079380.1| Xenopus tropicalis hypothetical protein MGC147512 (MGC147512), mRNA gb|BC122079.1| Xenopus tropicalis hypothetical protein MGC147512, mRNA (cDNA clone MGC:147512 IMAGE:7853916), complete cds Length = 1612 Score = 44.1 bits (22), Expect = 1.4 Identities = 34/38 (89%) Strand = Plus / Plus Query: 185 atggtgaaggagaccgcctactacgaaaccctgggggt 222 ||||||||||||||||| ||||| || ||||| ||||| Sbjct: 115 atggtgaaggagaccgcatactatgatacccttggggt 152
>ref|NM_014709.3| Homo sapiens ubiquitin specific peptidase 34 (USP34), mRNA Length = 11326 Score = 44.1 bits (22), Expect = 1.4 Identities = 25/26 (96%) Strand = Plus / Minus Query: 60 tcttcttcctcctcgtcttcttcccc 85 |||||||||||||| ||||||||||| Sbjct: 7521 tcttcttcctcctcttcttcttcccc 7496
>ref|XR_009659.1| PREDICTED: Macaca mulatta similar to high-mobility group box 3 (LOC693406), mRNA Length = 1272 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Minus Query: 58 tctcttcttcctcctcgtcttc 79 |||||||||||||||||||||| Sbjct: 623 tctcttcttcctcctcgtcttc 602
>emb|CT010460.16| Mouse DNA sequence from clone RP23-311G21 on chromosome 12, complete sequence Length = 243288 Score = 44.1 bits (22), Expect = 1.4 Identities = 25/26 (96%) Strand = Plus / Plus Query: 58 tctcttcttcctcctcgtcttcttcc 83 |||||||||||||||| ||||||||| Sbjct: 79996 tctcttcttcctcctcctcttcttcc 80021
>ref|XM_964274.1| PREDICTED: Tribolium castaneum similar to Glutamate [NMDA] receptor subunit 3A precursor (N-methyl-D-aspartate receptor subtype NR3A) (NMDAR-L) (LOC657839), mRNA Length = 4392 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Minus Query: 62 ttcttcctcctcgtcttcttcc 83 |||||||||||||||||||||| Sbjct: 1797 ttcttcctcctcgtcttcttcc 1776
>ref|NM_121263.2| Arabidopsis thaliana TUB6 (BETA-6 TUBULIN) (TUB6) mRNA, complete cds Length = 1641 Score = 44.1 bits (22), Expect = 1.4 Identities = 25/26 (96%) Strand = Plus / Minus Query: 57 atctcttcttcctcctcgtcttcttc 82 ||||||||||| |||||||||||||| Sbjct: 1414 atctcttcttcatcctcgtcttcttc 1389
>gb|AC162883.4| Mus musculus chromosome 1, clone RP24-148E21, complete sequence Length = 154199 Score = 44.1 bits (22), Expect = 1.4 Identities = 25/26 (96%) Strand = Plus / Plus Query: 58 tctcttcttcctcctcgtcttcttcc 83 |||||||||||||||| ||||||||| Sbjct: 76877 tctcttcttcctcctcttcttcttcc 76902
>gb|AC166079.2| Mus musculus BAC clone RP23-51L15 from chromosome 7, complete sequence Length = 193749 Score = 44.1 bits (22), Expect = 1.4 Identities = 25/26 (96%) Strand = Plus / Minus Query: 58 tctcttcttcctcctcgtcttcttcc 83 |||||||||||||||| ||||||||| Sbjct: 81853 tctcttcttcctcctcttcttcttcc 81828
>gb|AC149306.9| Medicago truncatula clone mth2-88b8, complete sequence Length = 89880 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Minus Query: 60 tcttcttcctcctcgtcttctt 81 |||||||||||||||||||||| Sbjct: 9670 tcttcttcctcctcgtcttctt 9649
>gb|AC137594.2| Oryza sativa (japonica cultivar-group) chromosome 9 BAC clone OSJNBa0065A15, complete sequence Length = 168806 Score = 44.1 bits (22), Expect = 1.4 Identities = 25/26 (96%) Strand = Plus / Plus Query: 57 atctcttcttcctcctcgtcttcttc 82 ||||||||||||||||| |||||||| Sbjct: 56159 atctcttcttcctcctcttcttcttc 56184
>gb|AC147155.2| Mus musculus BAC clone RP24-341L19 from chromosome Y, complete sequence Length = 156459 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Minus Query: 61 cttcttcctcctcgtcttcttc 82 |||||||||||||||||||||| Sbjct: 129277 cttcttcctcctcgtcttcttc 129256
>gb|AC133177.3| Mus musculus BAC clone RP24-116D7 from chromosome 18, complete sequence Length = 185838 Score = 44.1 bits (22), Expect = 1.4 Identities = 25/26 (96%) Strand = Plus / Minus Query: 58 tctcttcttcctcctcgtcttcttcc 83 |||||||||||||||| ||||||||| Sbjct: 69709 tctcttcttcctcctcctcttcttcc 69684 Score = 42.1 bits (21), Expect = 5.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 59 ctcttcttcctcctcgtcttcttcc 83 ||||||||||||||| ||||||||| Sbjct: 69567 ctcttcttcctcctcctcttcttcc 69543 Score = 42.1 bits (21), Expect = 5.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 59 ctcttcttcctcctcgtcttcttcc 83 ||||||||||||||| ||||||||| Sbjct: 69666 ctcttcttcctcctcctcttcttcc 69642
>ref|XM_850041.1| PREDICTED: Canis familiaris similar to ubiquitin specific protease 34 (LOC474608), mRNA Length = 11266 Score = 44.1 bits (22), Expect = 1.4 Identities = 25/26 (96%) Strand = Plus / Minus Query: 60 tcttcttcctcctcgtcttcttcccc 85 |||||||||||||| ||||||||||| Sbjct: 7487 tcttcttcctcctcctcttcttcccc 7462
>gb|AC125467.4| Mus musculus BAC clone RP24-91P24 from chromosome 8, complete sequence Length = 200304 Score = 44.1 bits (22), Expect = 1.4 Identities = 25/26 (96%) Strand = Plus / Minus Query: 58 tctcttcttcctcctcgtcttcttcc 83 |||||||||||||||| ||||||||| Sbjct: 172997 tctcttcttcctcctcctcttcttcc 172972
>gb|AC122930.4| Mus musculus BAC clone RP23-13L19 from chromosome 9, complete sequence Length = 224108 Score = 44.1 bits (22), Expect = 1.4 Identities = 25/26 (96%) Strand = Plus / Minus Query: 58 tctcttcttcctcctcgtcttcttcc 83 |||||||||||||||| ||||||||| Sbjct: 222849 tctcttcttcctcctcatcttcttcc 222824
>gb|AC132610.3| Mus musculus BAC clone RP23-374N15 from chromosome 6, complete sequence Length = 195587 Score = 44.1 bits (22), Expect = 1.4 Identities = 25/26 (96%) Strand = Plus / Minus Query: 58 tctcttcttcctcctcgtcttcttcc 83 |||||||||||||||| ||||||||| Sbjct: 68126 tctcttcttcctcctcctcttcttcc 68101
>gb|AC098717.3| Mus musculus BAC clone RP23-2G2 from 12, complete sequence Length = 211702 Score = 44.1 bits (22), Expect = 1.4 Identities = 25/26 (96%) Strand = Plus / Minus Query: 58 tctcttcttcctcctcgtcttcttcc 83 |||||||||||||||| ||||||||| Sbjct: 197276 tctcttcttcctcctcctcttcttcc 197251
>gb|AC153015.4| Mus musculus BAC clone RP23-200I3 from chromosome 8, complete sequence Length = 232038 Score = 44.1 bits (22), Expect = 1.4 Identities = 25/26 (96%) Strand = Plus / Plus Query: 58 tctcttcttcctcctcgtcttcttcc 83 |||||||||||||||| ||||||||| Sbjct: 130120 tctcttcttcctcctcctcttcttcc 130145
>dbj|AK125898.1| Homo sapiens cDNA FLJ43910 fis, clone TESTI4010851, weakly similar to Probable ubiquitin carboxyl-terminal hydrolase FAF-X (EC 3.1.2.15) Length = 4555 Score = 44.1 bits (22), Expect = 1.4 Identities = 25/26 (96%) Strand = Plus / Minus Query: 60 tcttcttcctcctcgtcttcttcccc 85 |||||||||||||| ||||||||||| Sbjct: 2040 tcttcttcctcctcttcttcttcccc 2015
>dbj|AK023845.1| Homo sapiens cDNA FLJ13783 fis, clone PLACE4000558, weakly similar to PROBABLE UBIQUITIN CARBOXYL-TERMINAL HYDROLASE FAF (EC 3.1.2.15) Length = 6304 Score = 44.1 bits (22), Expect = 1.4 Identities = 25/26 (96%) Strand = Plus / Minus Query: 60 tcttcttcctcctcgtcttcttcccc 85 |||||||||||||| ||||||||||| Sbjct: 1561 tcttcttcctcctcttcttcttcccc 1536
>dbj|AK001193.1| Homo sapiens cDNA FLJ10331 fis, clone NT2RM2000635, highly similar to Homo sapiens mRNA for KIAA0729 protein Length = 3891 Score = 44.1 bits (22), Expect = 1.4 Identities = 25/26 (96%) Strand = Plus / Minus Query: 60 tcttcttcctcctcgtcttcttcccc 85 |||||||||||||| ||||||||||| Sbjct: 112 tcttcttcctcctcttcttcttcccc 87
>gb|AC157606.5| Mus musculus chromosome 7, clone RP23-466J2, complete sequence Length = 174676 Score = 44.1 bits (22), Expect = 1.4 Identities = 25/26 (96%) Strand = Plus / Minus Query: 58 tctcttcttcctcctcgtcttcttcc 83 |||||||||||||||| ||||||||| Sbjct: 97025 tctcttcttcctcctcctcttcttcc 97000
>gb|AC162938.5| Mus musculus BAC clone RP23-104D6 from chromosome 9, complete sequence Length = 204657 Score = 44.1 bits (22), Expect = 1.4 Identities = 25/26 (96%) Strand = Plus / Minus Query: 60 tcttcttcctcctcgtcttcttcccc 85 |||||||||||||| ||||||||||| Sbjct: 86888 tcttcttcctcctcctcttcttcccc 86863
>gb|AY040074.1| Arabidopsis thaliana putative tubulin beta-6 chain (At5g12250) mRNA, complete cds Length = 1350 Score = 44.1 bits (22), Expect = 1.4 Identities = 25/26 (96%) Strand = Plus / Minus Query: 57 atctcttcttcctcctcgtcttcttc 82 ||||||||||| |||||||||||||| Sbjct: 1334 atctcttcttcatcctcgtcttcttc 1309
>gb|AF360260.1| Arabidopsis thaliana putative tubulin beta-6 chain (At5g12250) mRNA, complete cds Length = 1661 Score = 44.1 bits (22), Expect = 1.4 Identities = 25/26 (96%) Strand = Plus / Minus Query: 57 atctcttcttcctcctcgtcttcttc 82 ||||||||||| |||||||||||||| Sbjct: 1406 atctcttcttcatcctcgtcttcttc 1381
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9 Length = 22696651 Score = 44.1 bits (22), Expect = 1.4 Identities = 25/26 (96%) Strand = Plus / Plus Query: 57 atctcttcttcctcctcgtcttcttc 82 ||||||||||||||||| |||||||| Sbjct: 19573084 atctcttcttcctcctcttcttcttc 19573109
>emb|AL121585.22|HSBA504H3 Human DNA sequence from clone RP11-504H3 on chromosome 20 Contains gene SNX5 for sorting nexin 5, the C20orf72 gene, the PTMAP3 gene for PTMA (prothymosin, alpha) pseudogene 3, the 3' end of the ZNF339 gene for zinc finger protein 339 and two CpG islands, complete sequence Length = 139953 Score = 44.1 bits (22), Expect = 1.4 Identities = 25/26 (96%) Strand = Plus / Minus Query: 60 tcttcttcctcctcgtcttcttcccc 85 |||||||||||||||||||| ||||| Sbjct: 118784 tcttcttcctcctcgtcttcctcccc 118759
>gb|AC159899.2| Mus musculus BAC clone RP23-114N1 from chromosome 9, complete sequence Length = 198173 Score = 44.1 bits (22), Expect = 1.4 Identities = 25/26 (96%) Strand = Plus / Plus Query: 58 tctcttcttcctcctcgtcttcttcc 83 |||||||||||||||| ||||||||| Sbjct: 153393 tctcttcttcctcctcatcttcttcc 153418
>ref|NM_214643.1| Strongylocentrotus purpuratus heat shock protein gp96 (Gp96), mRNA gb|AY187547.1| Strongylocentrotus purpuratus heat shock protein gp96 mRNA, complete cds Length = 2497 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Minus Query: 62 ttcttcctcctcgtcttcttcc 83 |||||||||||||||||||||| Sbjct: 2380 ttcttcctcctcgtcttcttcc 2359
>emb|AL592312.1|ATT2L20 Arabidopsis thaliana DNA chromosome 5, BAC clone T2L20 (ESSA project) Length = 98506 Score = 44.1 bits (22), Expect = 1.4 Identities = 25/26 (96%) Strand = Plus / Plus Query: 57 atctcttcttcctcctcgtcttcttc 82 ||||||||||| |||||||||||||| Sbjct: 3414 atctcttcttcatcctcgtcttcttc 3439
>gb|AC153497.8| Mus musculus 10 BAC RP23-226H21 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 179741 Score = 44.1 bits (22), Expect = 1.4 Identities = 25/26 (96%) Strand = Plus / Plus Query: 58 tctcttcttcctcctcgtcttcttcc 83 |||||||||||||||| ||||||||| Sbjct: 93769 tctcttcttcctcctcctcttcttcc 93794 Score = 42.1 bits (21), Expect = 5.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 59 ctcttcttcctcctcgtcttcttcc 83 ||||||||||||||| ||||||||| Sbjct: 93785 ctcttcttcctcctcctcttcttcc 93809
>gb|AC017040.7| Homo sapiens BAC clone RP11-319B20 from 2, complete sequence Length = 178446 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1046 aaagatagcactgtctcaaaag 1067 |||||||||||||||||||||| Sbjct: 160019 aaagatagcactgtctcaaaag 159998
>gb|AC018889.7| Homo sapiens BAC clone RP11-479F13 from 2, complete sequence Length = 94084 Score = 44.1 bits (22), Expect = 1.4 Identities = 25/26 (96%) Strand = Plus / Plus Query: 60 tcttcttcctcctcgtcttcttcccc 85 |||||||||||||| ||||||||||| Sbjct: 21219 tcttcttcctcctcttcttcttcccc 21244
>dbj|AB007727.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MXC9 Length = 79590 Score = 44.1 bits (22), Expect = 1.4 Identities = 25/26 (96%) Strand = Plus / Plus Query: 57 atctcttcttcctcctcgtcttcttc 82 ||||||||||| |||||||||||||| Sbjct: 69837 atctcttcttcatcctcgtcttcttc 69862
>dbj|AK117925.1| Arabidopsis thaliana At5g12250 mRNA for putative tubulin beta-6 chain, complete cds, clone: RAFL19-11-D12 Length = 1649 Score = 44.1 bits (22), Expect = 1.4 Identities = 25/26 (96%) Strand = Plus / Minus Query: 57 atctcttcttcctcctcgtcttcttc 82 ||||||||||| |||||||||||||| Sbjct: 1449 atctcttcttcatcctcgtcttcttc 1424
>dbj|AK108057.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-138-A01, full insert sequence Length = 1722 Score = 44.1 bits (22), Expect = 1.4 Identities = 28/30 (93%) Strand = Plus / Plus Query: 322 gaaattccaggatcttggagaggcctacca 351 ||||||||||| ||| |||||||||||||| Sbjct: 432 gaaattccaggctctcggagaggcctacca 461
>emb|AJ586138.1| Homo sapiens mRNA for ubiquitin-specific proteinase 34 (USP34 gene) Length = 10188 Score = 44.1 bits (22), Expect = 1.4 Identities = 25/26 (96%) Strand = Plus / Minus Query: 60 tcttcttcctcctcgtcttcttcccc 85 |||||||||||||| ||||||||||| Sbjct: 7046 tcttcttcctcctcttcttcttcccc 7021
>gb|AC134793.10| Mus musculus chromosome 15, clone RP23-159M8, complete sequence Length = 216860 Score = 44.1 bits (22), Expect = 1.4 Identities = 25/26 (96%) Strand = Plus / Minus Query: 58 tctcttcttcctcctcgtcttcttcc 83 |||||||||||||||| ||||||||| Sbjct: 51452 tctcttcttcctcctcttcttcttcc 51427
>emb|AL671907.6| Mouse DNA sequence from clone RP23-245F8 on chromosome X, complete sequence Length = 144116 Score = 44.1 bits (22), Expect = 1.4 Identities = 25/26 (96%) Strand = Plus / Minus Query: 58 tctcttcttcctcctcgtcttcttcc 83 |||||||||||||||| ||||||||| Sbjct: 8906 tctcttcttcctcctcttcttcttcc 8881
>ref|XM_722670.1| Plasmodium yoelii yoelii str. 17XNL hypothetical protein (PY06994) partial mRNA Length = 1713 Score = 44.1 bits (22), Expect = 1.4 Identities = 25/26 (96%) Strand = Plus / Minus Query: 60 tcttcttcctcctcgtcttcttcccc 85 |||||||||||||| ||||||||||| Sbjct: 443 tcttcttcctcctcatcttcttcccc 418
>gb|AC153825.7| Mus musculus 10 BAC RP23-70B19 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 279677 Score = 44.1 bits (22), Expect = 1.4 Identities = 25/26 (96%) Strand = Plus / Plus Query: 58 tctcttcttcctcctcgtcttcttcc 83 |||||||||||||||| ||||||||| Sbjct: 271698 tctcttcttcctcctcctcttcttcc 271723 Score = 42.1 bits (21), Expect = 5.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 59 ctcttcttcctcctcgtcttcttcc 83 ||||||||||||||| ||||||||| Sbjct: 271714 ctcttcttcctcctcctcttcttcc 271738
>gb|AC127585.3| Mus musculus BAC clone RP24-141G21 from 15, complete sequence Length = 145858 Score = 44.1 bits (22), Expect = 1.4 Identities = 25/26 (96%) Strand = Plus / Plus Query: 58 tctcttcttcctcctcgtcttcttcc 83 |||||||||||||||| ||||||||| Sbjct: 39687 tctcttcttcctcctcttcttcttcc 39712
>gb|AC135083.4| Mus musculus BAC clone RP24-238A21 from 14, complete sequence Length = 179469 Score = 44.1 bits (22), Expect = 1.4 Identities = 25/26 (96%) Strand = Plus / Minus Query: 58 tctcttcttcctcctcgtcttcttcc 83 |||||||||||||||| ||||||||| Sbjct: 126201 tctcttcttcctcctcctcttcttcc 126176
>emb|AL606976.25| Mouse DNA sequence from clone RP23-113P22 on chromosome 4, complete sequence Length = 169465 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Minus Query: 61 cttcttcctcctcgtcttcttc 82 |||||||||||||||||||||| Sbjct: 81226 cttcttcctcctcgtcttcttc 81205
>gb|AC146617.3| Mus musculus BAC clone RP23-14M15 from 14, complete sequence Length = 221015 Score = 44.1 bits (22), Expect = 1.4 Identities = 25/26 (96%) Strand = Plus / Minus Query: 58 tctcttcttcctcctcgtcttcttcc 83 |||||||||||||||| ||||||||| Sbjct: 96442 tctcttcttcctcctcctcttcttcc 96417
>gb|AC124587.5| Mus musculus BAC clone RP23-132G24 from 1, complete sequence Length = 220046 Score = 44.1 bits (22), Expect = 1.4 Identities = 25/26 (96%) Strand = Plus / Minus Query: 58 tctcttcttcctcctcgtcttcttcc 83 |||||||||||||||| ||||||||| Sbjct: 150431 tctcttcttcctcctcctcttcttcc 150406
>gb|AC102776.10| Mus musculus chromosome 1, clone RP23-469D21, complete sequence Length = 190746 Score = 44.1 bits (22), Expect = 1.4 Identities = 25/26 (96%) Strand = Plus / Plus Query: 58 tctcttcttcctcctcgtcttcttcc 83 |||||||||||||||| ||||||||| Sbjct: 154508 tctcttcttcctcctcctcttcttcc 154533
>emb|AL807763.7| Mouse DNA sequence from clone RP23-28B24 on chromosome 4, complete sequence Length = 219463 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Minus Query: 58 tctcttcttcctcctcgtcttc 79 |||||||||||||||||||||| Sbjct: 140890 tctcttcttcctcctcgtcttc 140869
>emb|AL831918.1|HSM803251 Homo sapiens mRNA; cDNA DKFZp761F2418 (from clone DKFZp761F2418) Length = 2731 Score = 44.1 bits (22), Expect = 1.4 Identities = 25/26 (96%) Strand = Plus / Minus Query: 60 tcttcttcctcctcgtcttcttcccc 85 |||||||||||||| ||||||||||| Sbjct: 2333 tcttcttcctcctcttcttcttcccc 2308
>gb|M84703.1|ATHTUB6B Arabidopsis thaliana beta-6 tubulin (TUB6) gene, complete cds Length = 2061 Score = 44.1 bits (22), Expect = 1.4 Identities = 25/26 (96%) Strand = Plus / Minus Query: 57 atctcttcttcctcctcgtcttcttc 82 ||||||||||| |||||||||||||| Sbjct: 1856 atctcttcttcatcctcgtcttcttc 1831
>dbj|AB018272.1| Homo sapiens mRNA for KIAA0729 protein, partial cds Length = 4143 Score = 44.1 bits (22), Expect = 1.4 Identities = 25/26 (96%) Strand = Plus / Minus Query: 60 tcttcttcctcctcgtcttcttcccc 85 |||||||||||||| ||||||||||| Sbjct: 450 tcttcttcctcctcttcttcttcccc 425
>dbj|AB011142.2| Homo sapiens mRNA for KIAA0570 protein, partial cds Length = 11269 Score = 44.1 bits (22), Expect = 1.4 Identities = 25/26 (96%) Strand = Plus / Minus Query: 60 tcttcttcctcctcgtcttcttcccc 85 |||||||||||||| ||||||||||| Sbjct: 7576 tcttcttcctcctcttcttcttcccc 7551
>ref|NM_006885.3| Homo sapiens AT-binding transcription factor 1 (ATBF1), mRNA Length = 16064 Score = 42.1 bits (21), Expect = 5.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 59 ctcttcttcctcctcgtcttcttcc 83 ||||||||||||||| ||||||||| Sbjct: 2125 ctcttcttcctcctcctcttcttcc 2101
>ref|XM_430201.2| PREDICTED: Gallus gallus hypothetical LOC424931 (LOC424931), mRNA Length = 1191 Score = 42.1 bits (21), Expect = 5.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 63 tcttcctcctcgtcttcttcc 83 ||||||||||||||||||||| Sbjct: 182 tcttcctcctcgtcttcttcc 162
>ref|XM_418464.2| PREDICTED: Gallus gallus similar to Defective in sister chromatid cohesion homolog 1 (S. cerevisiae) (LOC420358), mRNA Length = 2045 Score = 42.1 bits (21), Expect = 5.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1199 cactgaagactgacatttaacaatt 1223 |||||||||||||||||||| |||| Sbjct: 1478 cactgaagactgacatttaaaaatt 1502
>ref|XM_425518.2| PREDICTED: Gallus gallus similar to atrophin-1 (LOC427946), mRNA Length = 4482 Score = 42.1 bits (21), Expect = 5.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 59 ctcttcttcctcctcgtcttcttcc 83 ||||||||||||||| ||||||||| Sbjct: 876 ctcttcttcctcctcctcttcttcc 900
>gb|AC006050.2| Homo sapiens chromosome 17, clone RP11-268F2, complete sequence Length = 160585 Score = 42.1 bits (21), Expect = 5.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 59 ctcttcttcctcctcgtcttcttcc 83 ||||||||||||||| ||||||||| Sbjct: 41473 ctcttcttcctcctcctcttcttcc 41497
>emb|CR855046.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSIGBa0125J07, complete sequence Length = 73885 Score = 42.1 bits (21), Expect = 5.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 59 ctcttcttcctcctcgtcttcttcc 83 ||||||||||||||| ||||||||| Sbjct: 49449 ctcttcttcctcctcttcttcttcc 49425
>ref|XM_001195633.1| PREDICTED: Strongylocentrotus purpuratus hypothetical protein LOC765256 (LOC765256), mRNA Length = 339 Score = 42.1 bits (21), Expect = 5.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 59 ctcttcttcctcctcgtcttcttcc 83 ||||||||||||||| ||||||||| Sbjct: 126 ctcttcttcctcctcctcttcttcc 102 Score = 42.1 bits (21), Expect = 5.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 59 ctcttcttcctcctcgtcttcttcc 83 ||||||||||||||| ||||||||| Sbjct: 141 ctcttcttcctcctcctcttcttcc 117
>ref|XM_001177590.1| PREDICTED: Strongylocentrotus purpuratus hypothetical LOC587510 (LOC587510), mRNA Length = 1962 Score = 42.1 bits (21), Expect = 5.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 59 ctcttcttcctcctcgtcttcttcc 83 |||||||||||||||| |||||||| Sbjct: 993 ctcttcttcctcctcgacttcttcc 969
>ref|XM_790266.2| PREDICTED: Strongylocentrotus purpuratus hypothetical LOC590669 (LOC590669), partial mRNA Length = 2418 Score = 42.1 bits (21), Expect = 5.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 59 ctcttcttcctcctcgtcttcttcc 83 |||||||||||||||| |||||||| Sbjct: 1254 ctcttcttcctcctcgacttcttcc 1230
>ref|XM_001184447.1| PREDICTED: Strongylocentrotus purpuratus similar to RNA binding motif protein 19 (LOC754111), partial mRNA Length = 1086 Score = 42.1 bits (21), Expect = 5.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 59 ctcttcttcctcctcgtcttcttcc 83 ||||||||||||||| ||||||||| Sbjct: 660 ctcttcttcctcctcctcttcttcc 636
>ref|XM_795364.2| PREDICTED: Strongylocentrotus purpuratus hypothetical LOC587510 (LOC587510), mRNA Length = 1962 Score = 42.1 bits (21), Expect = 5.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 59 ctcttcttcctcctcgtcttcttcc 83 |||||||||||||||| |||||||| Sbjct: 993 ctcttcttcctcctcgacttcttcc 969
>ref|XM_001198575.1| PREDICTED: Strongylocentrotus purpuratus hypothetical LOC590669 (LOC590669), partial mRNA Length = 2418 Score = 42.1 bits (21), Expect = 5.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 59 ctcttcttcctcctcgtcttcttcc 83 |||||||||||||||| |||||||| Sbjct: 1254 ctcttcttcctcctcgacttcttcc 1230
>ref|XM_001198676.1| PREDICTED: Strongylocentrotus purpuratus similar to RNA binding motif protein 19 (LOC765889), partial mRNA Length = 1086 Score = 42.1 bits (21), Expect = 5.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 59 ctcttcttcctcctcgtcttcttcc 83 ||||||||||||||| ||||||||| Sbjct: 660 ctcttcttcctcctcctcttcttcc 636
>ref|XM_001200390.1| PREDICTED: Strongylocentrotus purpuratus hypothetical protein LOC764166 (LOC764166), mRNA Length = 339 Score = 42.1 bits (21), Expect = 5.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 59 ctcttcttcctcctcgtcttcttcc 83 ||||||||||||||| ||||||||| Sbjct: 126 ctcttcttcctcctcctcttcttcc 102 Score = 42.1 bits (21), Expect = 5.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 59 ctcttcttcctcctcgtcttcttcc 83 ||||||||||||||| ||||||||| Sbjct: 141 ctcttcttcctcctcctcttcttcc 117
>ref|NM_001058956.1| Oryza sativa (japonica cultivar-group) Os04g0307200 (Os04g0307200) mRNA, complete cds Length = 2398 Score = 42.1 bits (21), Expect = 5.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 59 ctcttcttcctcctcgtcttcttcc 83 ||||||||||||||| ||||||||| Sbjct: 2093 ctcttcttcctcctcttcttcttcc 2069
>ref|XR_025515.1| PREDICTED: Pan troglodytes AT-binding transcription factor 1 (ATBF1), mRNA Length = 15316 Score = 42.1 bits (21), Expect = 5.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 59 ctcttcttcctcctcgtcttcttcc 83 ||||||||||||||| ||||||||| Sbjct: 1446 ctcttcttcctcctcctcttcttcc 1422
>dbj|AB260685.1| Oryza rufipogon DNA, locus RLD27, clone:27SNP99W1965 Length = 1000 Score = 42.1 bits (21), Expect = 5.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 59 ctcttcttcctcctcgtcttcttcc 83 ||||||||||||||| ||||||||| Sbjct: 742 ctcttcttcctcctcttcttcttcc 718
>dbj|AB260684.1| Oryza rufipogon DNA, locus RLD27, clone:27SNP98W1964 Length = 1000 Score = 42.1 bits (21), Expect = 5.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 59 ctcttcttcctcctcgtcttcttcc 83 ||||||||||||||| ||||||||| Sbjct: 742 ctcttcttcctcctcttcttcttcc 718
>dbj|AB260683.1| Oryza rufipogon DNA, locus RLD27, clone:27SNP96W1956 Length = 1000 Score = 42.1 bits (21), Expect = 5.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 59 ctcttcttcctcctcgtcttcttcc 83 ||||||||||||||| ||||||||| Sbjct: 742 ctcttcttcctcctcttcttcttcc 718
>dbj|AB260682.1| Oryza rufipogon DNA, locus RLD27, clone:27SNP91W108 Length = 1000 Score = 42.1 bits (21), Expect = 5.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 59 ctcttcttcctcctcgtcttcttcc 83 ||||||||||||||| ||||||||| Sbjct: 742 ctcttcttcctcctcctcttcttcc 718
>dbj|AB260681.1| Oryza glaberrima DNA, locus RLD27, clone:27SNP87W440 Length = 1002 Score = 42.1 bits (21), Expect = 5.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 59 ctcttcttcctcctcgtcttcttcc 83 ||||||||||||||| ||||||||| Sbjct: 746 ctcttcttcctcctcttcttcttcc 722
>dbj|AB260680.1| Oryza glaberrima DNA, locus RLD27, clone:27SNP85W401 Length = 1002 Score = 42.1 bits (21), Expect = 5.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 59 ctcttcttcctcctcgtcttcttcc 83 ||||||||||||||| ||||||||| Sbjct: 746 ctcttcttcctcctcttcttcttcc 722
>dbj|AB260679.1| Oryza sativa (indica cultivar-group) DNA, locus RLD27, clone:27SNP84C8005 Length = 1000 Score = 42.1 bits (21), Expect = 5.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 59 ctcttcttcctcctcgtcttcttcc 83 ||||||||||||||| ||||||||| Sbjct: 742 ctcttcttcctcctcctcttcttcc 718
>dbj|AB260678.1| Oryza sativa (indica cultivar-group) DNA, locus RLD27, clone:27SNP82_1034 Length = 1000 Score = 42.1 bits (21), Expect = 5.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 59 ctcttcttcctcctcgtcttcttcc 83 ||||||||||||||| ||||||||| Sbjct: 742 ctcttcttcctcctcttcttcttcc 718
>dbj|AB260677.1| Oryza sativa (indica cultivar-group) DNA, locus RLD27, clone:27SNP79_435 Length = 1000 Score = 42.1 bits (21), Expect = 5.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 59 ctcttcttcctcctcgtcttcttcc 83 ||||||||||||||| ||||||||| Sbjct: 742 ctcttcttcctcctcctcttcttcc 718
>dbj|AB260676.1| Oryza sativa (indica cultivar-group) DNA, locus RLD27, clone:27SNP77_415 Length = 1000 Score = 42.1 bits (21), Expect = 5.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 59 ctcttcttcctcctcgtcttcttcc 83 ||||||||||||||| ||||||||| Sbjct: 742 ctcttcttcctcctcttcttcttcc 718
>dbj|AB260675.1| Oryza sativa (indica cultivar-group) DNA, locus RLD27, clone:27SNP71_101 Length = 1000 Score = 42.1 bits (21), Expect = 5.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 59 ctcttcttcctcctcgtcttcttcc 83 ||||||||||||||| ||||||||| Sbjct: 742 ctcttcttcctcctcttcttcttcc 718
>dbj|AB260674.1| Oryza sativa (indica cultivar-group) DNA, locus RLD27, clone:27SNP70IR36 Length = 1000 Score = 42.1 bits (21), Expect = 5.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 59 ctcttcttcctcctcgtcttcttcc 83 ||||||||||||||| ||||||||| Sbjct: 742 ctcttcttcctcctcttcttcttcc 718
>dbj|AB260673.1| Oryza sativa (japonica cultivar-group) DNA, locus RLD27, clone:27SNP62Nippo Length = 1000 Score = 42.1 bits (21), Expect = 5.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 59 ctcttcttcctcctcgtcttcttcc 83 ||||||||||||||| ||||||||| Sbjct: 742 ctcttcttcctcctcttcttcttcc 718
>dbj|AB260672.1| Oryza sativa (indica cultivar-group) DNA, locus RLD27, clone:27SNP45Kasal Length = 1000 Score = 42.1 bits (21), Expect = 5.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 59 ctcttcttcctcctcgtcttcttcc 83 ||||||||||||||| ||||||||| Sbjct: 742 ctcttcttcctcctcctcttcttcc 718
>dbj|AB260671.1| Oryza sativa (japonica cultivar-group) DNA, locus RLD27, clone:27SNP42Dungh Length = 1000 Score = 42.1 bits (21), Expect = 5.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 59 ctcttcttcctcctcgtcttcttcc 83 ||||||||||||||| ||||||||| Sbjct: 742 ctcttcttcctcctcttcttcttcc 718
>dbj|AB260670.1| Oryza sativa (japonica cultivar-group) DNA, locus RLD27, clone:27SNP356_CT55 Length = 1000 Score = 42.1 bits (21), Expect = 5.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 59 ctcttcttcctcctcgtcttcttcc 83 ||||||||||||||| ||||||||| Sbjct: 742 ctcttcttcctcctcttcttcttcc 718
>dbj|AB260669.1| Oryza sativa (japonica cultivar-group) DNA, locus RLD27, clone:27SNP40Iwate Length = 1000 Score = 42.1 bits (21), Expect = 5.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 59 ctcttcttcctcctcgtcttcttcc 83 ||||||||||||||| ||||||||| Sbjct: 742 ctcttcttcctcctcttcttcttcc 718
>dbj|AB260668.1| Oryza rufipogon DNA, locus RLD27, clone:27SNP375W1294-1 Length = 1000 Score = 42.1 bits (21), Expect = 5.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 59 ctcttcttcctcctcgtcttcttcc 83 ||||||||||||||| ||||||||| Sbjct: 742 ctcttcttcctcctcttcttcttcc 718
>dbj|AB260667.1| Oryza rufipogon DNA, locus RLD27, clone:27SNP374W1236-1 Length = 1000 Score = 42.1 bits (21), Expect = 5.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 59 ctcttcttcctcctcgtcttcttcc 83 ||||||||||||||| ||||||||| Sbjct: 742 ctcttcttcctcctcttcttcttcc 718
>dbj|AB260666.1| Oryza rufipogon DNA, locus RLD27, clone:27SNP369_SN Length = 1000 Score = 42.1 bits (21), Expect = 5.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 59 ctcttcttcctcctcgtcttcttcc 83 ||||||||||||||| ||||||||| Sbjct: 742 ctcttcttcctcctcttcttcttcc 718
>dbj|AB260665.1| Oryza rufipogon DNA, locus RLD27, clone:27SNP362_CB22 Length = 1001 Score = 42.1 bits (21), Expect = 5.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 59 ctcttcttcctcctcgtcttcttcc 83 ||||||||||||||| ||||||||| Sbjct: 743 ctcttcttcctcctcttcttcttcc 719
>dbj|AB260664.1| Oryza rufipogon DNA, locus RLD27, clone:27SNP358_YG2A Length = 1000 Score = 42.1 bits (21), Expect = 5.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 59 ctcttcttcctcctcgtcttcttcc 83 ||||||||||||||| ||||||||| Sbjct: 742 ctcttcttcctcctcttcttcttcc 718
>dbj|AB260663.1| Oryza rufipogon DNA, locus RLD27, clone:27SNP356_CT55 Length = 1000 Score = 42.1 bits (21), Expect = 5.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 59 ctcttcttcctcctcgtcttcttcc 83 ||||||||||||||| ||||||||| Sbjct: 742 ctcttcttcctcctcttcttcttcc 718
>dbj|AB260662.1| Oryza sativa (japonica cultivar-group) DNA, locus RLD27, clone:27SNP225Kosh Length = 1000 Score = 42.1 bits (21), Expect = 5.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 59 ctcttcttcctcctcgtcttcttcc 83 ||||||||||||||| ||||||||| Sbjct: 742 ctcttcttcctcctcttcttcttcc 718
>dbj|AB260661.1| Oryza sativa (japonica cultivar-group) DNA, locus RLD27, clone:27SNP216Yume Length = 1000 Score = 42.1 bits (21), Expect = 5.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 59 ctcttcttcctcctcgtcttcttcc 83 ||||||||||||||| ||||||||| Sbjct: 742 ctcttcttcctcctcttcttcttcc 718
>dbj|AB260660.1| Oryza sativa (japonica cultivar-group) DNA, locus RLD27, clone:27SNP208Some Length = 1000 Score = 42.1 bits (21), Expect = 5.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 59 ctcttcttcctcctcgtcttcttcc 83 ||||||||||||||| ||||||||| Sbjct: 742 ctcttcttcctcctcttcttcttcc 718
>dbj|AB260659.1| Oryza sativa (japonica cultivar-group) DNA, locus RLD27, clone:27SNP16Unr17 Length = 1000 Score = 42.1 bits (21), Expect = 5.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 59 ctcttcttcctcctcgtcttcttcc 83 ||||||||||||||| ||||||||| Sbjct: 742 ctcttcttcctcctcttcttcttcc 718
>dbj|AB260658.1| Oryza sativa (japonica cultivar-group) DNA, locus RLD27, clone:27SNP166Hime Length = 1000 Score = 42.1 bits (21), Expect = 5.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 59 ctcttcttcctcctcgtcttcttcc 83 ||||||||||||||| ||||||||| Sbjct: 742 ctcttcttcctcctcttcttcttcc 718
>dbj|AB260657.1| Oryza sativa (japonica cultivar-group) DNA, locus RLD27, clone:27SNP117Kake Length = 1000 Score = 42.1 bits (21), Expect = 5.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 59 ctcttcttcctcctcgtcttcttcc 83 ||||||||||||||| ||||||||| Sbjct: 742 ctcttcttcctcctcttcttcttcc 718
>dbj|AB260656.1| Oryza barthii DNA, locus RLD27, clone:27SNP114W720 Length = 1002 Score = 42.1 bits (21), Expect = 5.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 59 ctcttcttcctcctcgtcttcttcc 83 ||||||||||||||| ||||||||| Sbjct: 746 ctcttcttcctcctcttcttcttcc 722
>dbj|AB260655.1| Oryza meridionalis DNA, locus RLD27, clone:27SNP108W1300 Length = 1000 Score = 42.1 bits (21), Expect = 5.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 59 ctcttcttcctcctcgtcttcttcc 83 ||||||||||||||| ||||||||| Sbjct: 742 ctcttcttcctcctcttcttcttcc 718
>dbj|AB260654.1| Oryza glumipatula DNA, locus RLD27, clone:27SNP102W1169 Length = 1003 Score = 42.1 bits (21), Expect = 5.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 59 ctcttcttcctcctcgtcttcttcc 83 ||||||||||||||| ||||||||| Sbjct: 745 ctcttcttcctcctcctcttcttcc 721
>gb|AE013599.4| Drosophila melanogaster chromosome 2R, complete sequence Length = 21146708 Score = 42.1 bits (21), Expect = 5.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 15 gcggatccacggtgtcctccc 35 ||||||||||||||||||||| Sbjct: 4347765 gcggatccacggtgtcctccc 4347745
>gb|BC090620.1| Mus musculus proline, glutamic acid and leucine rich protein 1, mRNA (cDNA clone MGC:116580 IMAGE:30699968), complete cds Length = 3457 Score = 42.1 bits (21), Expect = 5.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 59 ctcttcttcctcctcgtcttcttcc 83 ||||||||||||||| ||||||||| Sbjct: 2875 ctcttcttcctcctcttcttcttcc 2851
>tpg|BK001744.1| TPA_exp: Suid herpesvirus 1, complete genome Length = 143461 Score = 42.1 bits (21), Expect = 5.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 63 tcttcctcctcgtcttcttcc 83 ||||||||||||||||||||| Sbjct: 116707 tcttcctcctcgtcttcttcc 116687 Score = 42.1 bits (21), Expect = 5.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 63 tcttcctcctcgtcttcttcc 83 ||||||||||||||||||||| Sbjct: 127895 tcttcctcctcgtcttcttcc 127915
>gb|AC095567.7| Rattus norvegicus BAC CH230-7O16 () complete sequence Length = 224240 Score = 42.1 bits (21), Expect = 5.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 59 ctcttcttcctcctcgtcttcttcc 83 ||||||||||||||| ||||||||| Sbjct: 162887 ctcttcttcctcctcctcttcttcc 162911
>gb|AY964106.1| Xenopus laevis Mnt/Rox mRNA, complete cds Length = 2693 Score = 42.1 bits (21), Expect = 5.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 59 ctcttcttcctcctcgtcttcttcc 83 ||||||||||||||| ||||||||| Sbjct: 370 ctcttcttcctcctcctcttcttcc 346
>ref|XM_222200.4| PREDICTED: Rattus norvegicus RNA binding motif protein 19 (predicted) (Rbm19_predicted), mRNA Length = 4073 Score = 42.1 bits (21), Expect = 5.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 59 ctcttcttcctcctcgtcttcttcc 83 ||||||||||||||| ||||||||| Sbjct: 2261 ctcttcttcctcctcctcttcttcc 2237
>ref|XM_001064587.1| PREDICTED: Rattus norvegicus hypothetical protein LOC685628 (LOC685628), mRNA Length = 357 Score = 42.1 bits (21), Expect = 5.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 59 ctcttcttcctcctcgtcttcttcc 83 ||||||||||||||| ||||||||| Sbjct: 153 ctcttcttcctcctcctcttcttcc 129
>ref|XM_001069006.1| PREDICTED: Rattus norvegicus similar to SGT1 protein homolog (Ecdysoneless homolog) (LOC688968), mRNA Length = 1668 Score = 42.1 bits (21), Expect = 5.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 59 ctcttcttcctcctcgtcttcttcc 83 ||||||||||||||| ||||||||| Sbjct: 1383 ctcttcttcctcctcctcttcttcc 1359
>ref|XM_344284.3| PREDICTED: Rattus norvegicus similar to potassium large conductance calcium-activated channel, subfamily M, alpha member 1 (LOC498438), mRNA Length = 453 Score = 42.1 bits (21), Expect = 5.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 59 ctcttcttcctcctcgtcttcttcc 83 ||||||||||||||| ||||||||| Sbjct: 132 ctcttcttcctcctcctcttcttcc 156
>ref|XM_001079940.1| PREDICTED: Rattus norvegicus similar to RNA binding motif protein 19 (LOC687727), mRNA Length = 3746 Score = 42.1 bits (21), Expect = 5.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 59 ctcttcttcctcctcgtcttcttcc 83 ||||||||||||||| ||||||||| Sbjct: 1934 ctcttcttcctcctcctcttcttcc 1910
>ref|XM_001066990.1| PREDICTED: Rattus norvegicus hypothetical protein LOC683669 (LOC683669), mRNA Length = 648 Score = 42.1 bits (21), Expect = 5.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 59 ctcttcttcctcctcgtcttcttcc 83 ||||||||||||||| ||||||||| Sbjct: 234 ctcttcttcctcctcctcttcttcc 210
>ref|XM_001063728.1| PREDICTED: Rattus norvegicus similar to p53-associated parkin-like cytoplasmic protein (predicted) (RGD1562008_predicted), mRNA Length = 7668 Score = 42.1 bits (21), Expect = 5.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 59 ctcttcttcctcctcgtcttc 79 ||||||||||||||||||||| Sbjct: 7386 ctcttcttcctcctcgtcttc 7366
>ref|XR_007870.1| PREDICTED: Rattus norvegicus similar to Scaffold attachment factor B2 (LOC301126), mRNA Length = 3353 Score = 42.1 bits (21), Expect = 5.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 59 ctcttcttcctcctcgtcttcttcc 83 ||||||||||||||| ||||||||| Sbjct: 1026 ctcttcttcctcctcttcttcttcc 1002
>ref|XM_236927.4| PREDICTED: Rattus norvegicus similar to p53-associated parkin-like cytoplasmic protein (predicted) (RGD1562008_predicted), mRNA Length = 7669 Score = 42.1 bits (21), Expect = 5.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 59 ctcttcttcctcctcgtcttc 79 ||||||||||||||||||||| Sbjct: 7386 ctcttcttcctcctcgtcttc 7366
>ref|XM_001077058.1| PREDICTED: Rattus norvegicus hypothetical protein LOC687091 (LOC687091), mRNA Length = 1101 Score = 42.1 bits (21), Expect = 5.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 59 ctcttcttcctcctcgtcttcttcc 83 ||||||||||||||| ||||||||| Sbjct: 633 ctcttcttcctcctcctcttcttcc 609 Score = 42.1 bits (21), Expect = 5.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 59 ctcttcttcctcctcgtcttcttcc 83 ||||||||||||||| ||||||||| Sbjct: 648 ctcttcttcctcctcctcttcttcc 624
>ref|XM_001059413.1| PREDICTED: Rattus norvegicus similar to HESB like domain containing 1 (predicted) (RGD1563216_predicted), mRNA Length = 1262 Score = 42.1 bits (21), Expect = 5.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 59 ctcttcttcctcctcgtcttcttcc 83 ||||||||||||||| ||||||||| Sbjct: 1188 ctcttcttcctcctcttcttcttcc 1212
>ref|XM_576075.2| PREDICTED: Rattus norvegicus similar to HESB like domain containing 1 (predicted) (RGD1563216_predicted), mRNA Length = 1262 Score = 42.1 bits (21), Expect = 5.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 59 ctcttcttcctcctcgtcttcttcc 83 ||||||||||||||| ||||||||| Sbjct: 1188 ctcttcttcctcctcttcttcttcc 1212
>ref|XM_001059385.1| PREDICTED: Rattus norvegicus hypothetical protein LOC680900 (LOC680900), mRNA Length = 486 Score = 42.1 bits (21), Expect = 5.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 59 ctcttcttcctcctcgtcttcttcc 83 ||||||||||||||| ||||||||| Sbjct: 138 ctcttcttcctcctcctcttcttcc 114
>ref|XM_001055147.1| PREDICTED: Rattus norvegicus myelin transcription factor 1 (predicted) (Myt1_predicted), mRNA Length = 5286 Score = 42.1 bits (21), Expect = 5.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 59 ctcttcttcctcctcgtcttcttcc 83 ||||||||||||||| ||||||||| Sbjct: 1009 ctcttcttcctcctcctcttcttcc 985
>ref|XM_342605.3| PREDICTED: Rattus norvegicus myelin transcription factor 1 (predicted) (Myt1_predicted), mRNA Length = 5286 Score = 42.1 bits (21), Expect = 5.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 59 ctcttcttcctcctcgtcttcttcc 83 ||||||||||||||| ||||||||| Sbjct: 1009 ctcttcttcctcctcctcttcttcc 985
>ref|XR_008181.1| PREDICTED: Rattus norvegicus hypothetical protein LOC683140 (LOC683140), mRNA Length = 794 Score = 42.1 bits (21), Expect = 5.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 59 ctcttcttcctcctcgtcttcttcc 83 ||||||||||||||| ||||||||| Sbjct: 422 ctcttcttcctcctcctcttcttcc 398
>ref|XM_001077190.1| PREDICTED: Rattus norvegicus hypothetical protein LOC691198 (LOC691198), mRNA Length = 561 Score = 42.1 bits (21), Expect = 5.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 59 ctcttcttcctcctcgtcttcttcc 83 ||||||||||||||| ||||||||| Sbjct: 321 ctcttcttcctcctcttcttcttcc 297
>ref|XM_001102516.1| PREDICTED: Macaca mulatta AT-binding transcription factor 1, transcript variant 1 (ATBF1), mRNA Length = 14293 Score = 42.1 bits (21), Expect = 5.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 59 ctcttcttcctcctcgtcttcttcc 83 ||||||||||||||| ||||||||| Sbjct: 426 ctcttcttcctcctcctcttcttcc 402
>ref|XM_001102605.1| PREDICTED: Macaca mulatta AT-binding transcription factor 1, transcript variant 2 (ATBF1), mRNA Length = 16022 Score = 42.1 bits (21), Expect = 5.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 59 ctcttcttcctcctcgtcttcttcc 83 ||||||||||||||| ||||||||| Sbjct: 2125 ctcttcttcctcctcctcttcttcc 2101
>ref|XM_001112090.1| PREDICTED: Macaca mulatta reticulon 4 (RTN4), mRNA Length = 4958 Score = 42.1 bits (21), Expect = 5.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 59 ctcttcttcctcctcgtcttcttcc 83 ||||||||||||||| ||||||||| Sbjct: 558 ctcttcttcctcctcctcttcttcc 534
>ref|XM_001085665.1| PREDICTED: Macaca mulatta similar to high-mobility group box 2 (LOC697057), mRNA Length = 1505 Score = 42.1 bits (21), Expect = 5.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 63 tcttcctcctcgtcttcttcc 83 ||||||||||||||||||||| Sbjct: 947 tcttcctcctcgtcttcttcc 927
>emb|AM055943.1| Toxoplasma gondii, strain RH, genomic DNA chromosome Ib Length = 2013089 Score = 42.1 bits (21), Expect = 5.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 59 ctcttcttcctcctcgtcttcttcc 83 ||||||||| ||||||||||||||| Sbjct: 1348417 ctcttcttcttcctcgtcttcttcc 1348441
>gb|DQ440272.1| Aedes aegypti clone AET-3489 nucleosome assembly protein NAP-17 mRNA, complete cds Length = 1188 Score = 42.1 bits (21), Expect = 5.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 59 ctcttcttcctcctcgtcttcttcc 83 ||||||||||||||| ||||||||| Sbjct: 1035 ctcttcttcctcctcctcttcttcc 1011
>gb|AC119163.23| Mus musculus chromosome 3, clone RP24-527P22, complete sequence Length = 202675 Score = 42.1 bits (21), Expect = 5.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 59 ctcttcttcctcctcgtcttcttcc 83 ||||||||||||||| ||||||||| Sbjct: 15385 ctcttcttcctcctcctcttcttcc 15409
>emb|CT009561.24| Mouse DNA sequence from clone RP23-128B6 on chromosome 16, complete sequence Length = 141692 Score = 42.1 bits (21), Expect = 5.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 59 ctcttcttcctcctcgtcttcttcc 83 ||||||||||||||| ||||||||| Sbjct: 99182 ctcttcttcctcctcctcttcttcc 99206 Score = 42.1 bits (21), Expect = 5.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 59 ctcttcttcctcctcgtcttcttcc 83 ||||||||||||||| ||||||||| Sbjct: 99197 ctcttcttcctcctcctcttcttcc 99221
>ref|XM_363379.1| Magnaporthe grisea 70-15 hypothetical protein (MG01305.4) partial mRNA Length = 474 Score = 42.1 bits (21), Expect = 5.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 59 ctcttcttcctcctcgtcttcttcc 83 ||||||||||||||| ||||||||| Sbjct: 207 ctcttcttcctcctcctcttcttcc 183
>ref|NM_103876.2| Arabidopsis thaliana unknown protein (AT1G49890) mRNA, complete cds Length = 2547 Score = 42.1 bits (21), Expect = 5.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 59 ctcttcttcctcctcgtcttcttcc 83 ||||||||||||||| ||||||||| Sbjct: 396 ctcttcttcctcctcttcttcttcc 420
>gb|BC105968.1| Homo sapiens KIAA1285 protein, mRNA (cDNA clone IMAGE:4446489), partial cds Length = 1737 Score = 42.1 bits (21), Expect = 5.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 59 ctcttcttcctcctcgtcttcttcc 83 |||||||||||||||||||| |||| Sbjct: 883 ctcttcttcctcctcgtcttgttcc 859
>gb|AC168212.7| Mus musculus chromosome 18, clone RP23-290N19, complete sequence Length = 197719 Score = 42.1 bits (21), Expect = 5.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 58 tctcttcttcctcctcgtcttcttc 82 |||||||||||||||| |||||||| Sbjct: 170422 tctcttcttcctcctcttcttcttc 170446
>gb|AC135667.5| Mus musculus BAC clone RP24-536G18 from chromosome 13, complete sequence Length = 166185 Score = 42.1 bits (21), Expect = 5.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 59 ctcttcttcctcctcgtcttcttcc 83 ||||||||||||||| ||||||||| Sbjct: 81372 ctcttcttcctcctcctcttcttcc 81396
>gb|AC142244.11| Mus musculus chromosome 1, clone RP23-79H24, complete sequence Length = 132061 Score = 42.1 bits (21), Expect = 5.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 59 ctcttcttcctcctcgtcttcttcc 83 ||||||||||||||| ||||||||| Sbjct: 128621 ctcttcttcctcctcctcttcttcc 128645
>gb|AC120180.19| Mus musculus chromosome 1, clone RP24-499I2, complete sequence Length = 183516 Score = 42.1 bits (21), Expect = 5.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 59 ctcttcttcctcctcgtcttcttcc 83 ||||||||||||||| ||||||||| Sbjct: 66756 ctcttcttcctcctcctcttcttcc 66732
>gb|AC115877.13| Mus musculus chromosome 15, clone RP24-358H21, complete sequence Length = 169136 Score = 42.1 bits (21), Expect = 5.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 59 ctcttcttcctcctcgtcttcttcc 83 ||||||||||||||| ||||||||| Sbjct: 76012 ctcttcttcctcctcctcttcttcc 75988
>ref|XM_629259.1| Dictyostelium discoideum AX4 CHD gene family protein containing chromodomain, helicase domain, and DNA-binding domain (DDB_0220643) mRNA, complete cds Length = 9216 Score = 42.1 bits (21), Expect = 5.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 59 ctcttcttcctcctcgtcttcttcc 83 ||||||||||||||| ||||||||| Sbjct: 687 ctcttcttcctcctcctcttcttcc 663
>gb|AC165426.3| Mus musculus BAC clone RP23-157G2 from chromosome 5, complete sequence Length = 245594 Score = 42.1 bits (21), Expect = 5.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 59 ctcttcttcctcctcgtcttcttcc 83 ||||||||||||||| ||||||||| Sbjct: 58462 ctcttcttcctcctcctcttcttcc 58486
>gb|AC167972.3| Mus musculus BAC clone RP24-73H24 from chromosome 13, complete sequence Length = 224330 Score = 42.1 bits (21), Expect = 5.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 59 ctcttcttcctcctcgtcttcttcc 83 ||||||||||||||| ||||||||| Sbjct: 55784 ctcttcttcctcctcctcttcttcc 55760
>gb|AC134474.4| Mus musculus BAC clone RP23-234N16 from chromosome 6, complete sequence Length = 171491 Score = 42.1 bits (21), Expect = 5.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 59 ctcttcttcctcctcgtcttcttcc 83 ||||||||||||||| ||||||||| Sbjct: 168174 ctcttcttcctcctcctcttcttcc 168150
>gb|AC168206.7| Mus musculus chromosome 1, clone RP23-17B20, complete sequence Length = 245358 Score = 42.1 bits (21), Expect = 5.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 59 ctcttcttcctcctcgtcttcttcc 83 ||||||||||||||| ||||||||| Sbjct: 216846 ctcttcttcctcctcctcttcttcc 216822
>gb|AC167466.6| Mus musculus chromosome 7, clone RP24-220N8, complete sequence Length = 163721 Score = 42.1 bits (21), Expect = 5.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 58 tctcttcttcctcctcgtcttcttc 82 |||||||||||||||| |||||||| Sbjct: 56948 tctcttcttcctcctcctcttcttc 56924
>gb|AC154392.18| Mus musculus chromosome 1, clone RP23-413K6, complete sequence Length = 205076 Score = 42.1 bits (21), Expect = 5.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 59 ctcttcttcctcctcgtcttcttcc 83 ||||||||||||||| ||||||||| Sbjct: 105791 ctcttcttcctcctcctcttcttcc 105815
>gb|AC163217.9| Mus musculus chromosome 1, clone RP23-474A1, complete sequence Length = 184175 Score = 42.1 bits (21), Expect = 5.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 58 tctcttcttcctcctcgtcttcttc 82 |||||||||||||||| |||||||| Sbjct: 28109 tctcttcttcctcctcttcttcttc 28133
>gb|AC167405.5| Mus musculus chromosome 18, clone wi1-977A17, complete sequence Length = 41204 Score = 42.1 bits (21), Expect = 5.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 58 tctcttcttcctcctcgtcttcttc 82 |||||||||||||||| |||||||| Sbjct: 32308 tctcttcttcctcctcttcttcttc 32284
>gb|AC124333.13| Mus musculus chromosome 1, clone RP24-511E9, complete sequence Length = 185857 Score = 42.1 bits (21), Expect = 5.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 59 ctcttcttcctcctcgtcttcttcc 83 ||||||||||||||| ||||||||| Sbjct: 170757 ctcttcttcctcctcctcttcttcc 170781
>gb|AC158767.3| Mus musculus chromosome 1, clone RP24-128E5, complete sequence Length = 188758 Score = 42.1 bits (21), Expect = 5.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 59 ctcttcttcctcctcgtcttcttcc 83 ||||||||||||||| ||||||||| Sbjct: 177646 ctcttcttcctcctcctcttcttcc 177622
>gb|AE017356.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 14, complete sequence Length = 762694 Score = 42.1 bits (21), Expect = 5.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 379 ggcttatgataagcatggaaa 399 ||||||||||||||||||||| Sbjct: 706427 ggcttatgataagcatggaaa 706447
>gb|AF005370.1| Alcelaphine herpesvirus 1 L-DNA, complete sequence Length = 130608 Score = 42.1 bits (21), Expect = 5.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 59 ctcttcttcctcctcgtcttcttcc 83 ||||||||||||||| ||||||||| Sbjct: 117768 ctcttcttcctcctcctcttcttcc 117792
>gb|AC102923.10| Mus musculus chromosome 1, clone RP24-262J2, complete sequence Length = 159541 Score = 42.1 bits (21), Expect = 5.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 59 ctcttcttcctcctcgtcttcttcc 83 ||||||||||||||| ||||||||| Sbjct: 31175 ctcttcttcctcctcttcttcttcc 31151
>ref|XM_879303.1| PREDICTED: Bos taurus similar to SEC24-related protein C, transcript variant 8 (LOC509488), mRNA Length = 4381 Score = 42.1 bits (21), Expect = 5.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1295 gcacctgtatgtatgttttcc 1315 ||||||||||||||||||||| Sbjct: 3758 gcacctgtatgtatgttttcc 3738
>ref|XM_879271.1| PREDICTED: Bos taurus similar to SEC24-related protein C, transcript variant 7 (LOC509488), mRNA Length = 4465 Score = 42.1 bits (21), Expect = 5.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1295 gcacctgtatgtatgttttcc 1315 ||||||||||||||||||||| Sbjct: 3842 gcacctgtatgtatgttttcc 3822
>ref|XM_879243.1| PREDICTED: Bos taurus similar to SEC24-related protein C, transcript variant 6 (LOC509488), mRNA Length = 4273 Score = 42.1 bits (21), Expect = 5.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1295 gcacctgtatgtatgttttcc 1315 ||||||||||||||||||||| Sbjct: 3650 gcacctgtatgtatgttttcc 3630
>ref|XM_879217.1| PREDICTED: Bos taurus similar to SEC24-related protein C, transcript variant 5 (LOC509488), mRNA Length = 4522 Score = 42.1 bits (21), Expect = 5.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1295 gcacctgtatgtatgttttcc 1315 ||||||||||||||||||||| Sbjct: 3899 gcacctgtatgtatgttttcc 3879
>ref|XM_879143.1| PREDICTED: Bos taurus similar to SEC24-related protein C, transcript variant 2 (LOC509488), mRNA Length = 2422 Score = 42.1 bits (21), Expect = 5.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1295 gcacctgtatgtatgttttcc 1315 ||||||||||||||||||||| Sbjct: 1799 gcacctgtatgtatgttttcc 1779
>ref|XM_586458.2| PREDICTED: Bos taurus similar to SEC24-related protein C, transcript variant 1 (LOC509488), mRNA Length = 4465 Score = 42.1 bits (21), Expect = 5.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1295 gcacctgtatgtatgttttcc 1315 ||||||||||||||||||||| Sbjct: 3842 gcacctgtatgtatgttttcc 3822
>gb|AC099582.7| Mus musculus chromosome 1, clone RP23-188D7, complete sequence Length = 192016 Score = 42.1 bits (21), Expect = 5.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 59 ctcttcttcctcctcgtcttcttcc 83 ||||||||||||||| ||||||||| Sbjct: 62150 ctcttcttcctcctcctcttcttcc 62174
>gb|AC100427.25| Mus musculus chromosome 10, clone RP23-136J15, complete sequence Length = 206339 Score = 42.1 bits (21), Expect = 5.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 61 cttcttcctcctcgtcttcttcccc 85 ||||||||||||| ||||||||||| Sbjct: 59514 cttcttcctcctcctcttcttcccc 59490
>gb|AC118628.11| Mus musculus chromosome 19, clone RP24-92P15, complete sequence Length = 202071 Score = 42.1 bits (21), Expect = 5.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 59 ctcttcttcctcctcgtcttcttcc 83 ||||||||||||||| ||||||||| Sbjct: 11235 ctcttcttcctcctcctcttcttcc 11259
>gb|AC112633.6| Rattus norvegicus 11 BAC CH230-200K21 (Children's Hospital Oakland Research Institute) complete sequence Length = 230130 Score = 42.1 bits (21), Expect = 5.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 59 ctcttcttcctcctcgtcttcttcc 83 ||||||||||||||| ||||||||| Sbjct: 37640 ctcttcttcctcctcctcttcttcc 37616
>gb|AF133093.2| Mus musculus chromosome X clones CT7-116D19, CT7-309B4, CT7-567G9, MGSPI-15528, MGSPI-15530 complete sequence Length = 235497 Score = 42.1 bits (21), Expect = 5.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 59 ctcttcttcctcctcgtcttcttcc 83 ||||||||||||||| ||||||||| Sbjct: 1607 ctcttcttcctcctcctcttcttcc 1631
>gb|AC091453.2| Mus musculus chromosome X clones RP21-19N11, RP21-667A15, RP21-395M8 complete sequence Length = 350000 Score = 42.1 bits (21), Expect = 5.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 59 ctcttcttcctcctcgtcttcttcc 83 ||||||||||||||| ||||||||| Sbjct: 345147 ctcttcttcctcctcctcttcttcc 345171
>gb|AC115036.10| Mus musculus chromosome 7, clone RP24-274F20, complete sequence Length = 173506 Score = 42.1 bits (21), Expect = 5.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 59 ctcttcttcctcctcgtcttcttcc 83 ||||||||||||||| ||||||||| Sbjct: 105142 ctcttcttcctcctcctcttcttcc 105166
>gb|AC132948.3| Mus musculus BAC clone RP24-467P6 from chromosome 8, complete sequence Length = 166801 Score = 42.1 bits (21), Expect = 5.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 59 ctcttcttcctcctcgtcttcttcc 83 ||||||||||||||| ||||||||| Sbjct: 120087 ctcttcttcctcctcctcttcttcc 120111
>gb|AC129332.6| Mus musculus BAC clone RP23-91I19 from chromosome 9, complete sequence Length = 219117 Score = 42.1 bits (21), Expect = 5.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 59 ctcttcttcctcctcgtcttcttcc 83 ||||||||||||||| ||||||||| Sbjct: 135374 ctcttcttcctcctcctcttcttcc 135398
>gb|AC124779.4| Mus musculus BAC clone RP23-100O18 from chromosome 6, complete sequence Length = 197482 Score = 42.1 bits (21), Expect = 5.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 59 ctcttcttcctcctcgtcttcttcc 83 ||||||||||||||| ||||||||| Sbjct: 33026 ctcttcttcctcctcctcttcttcc 33002
>gb|AF030001.1|MMMHC29N7 Mus musculus major histocompatibility locus class III region:butyrophilin-like protein gene, partial cds; Notch4, PBX2, RAGE, lysophatidic acid acyl transferase-alpha, palmitoyl-protein thioesterase 2 (PPT2), CREB-RP, and tenascin X (TNX) genes, complete cds; and CYP21OHB pseudogene, complete sequence Length = 201964 Score = 42.1 bits (21), Expect = 5.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 59 ctcttcttcctcctcgtcttcttcc 83 ||||||||||||||| ||||||||| Sbjct: 146084 ctcttcttcctcctcctcttcttcc 146060
>gb|BC071848.1| Homo sapiens reticulon 4, mRNA (cDNA clone IMAGE:4635625), complete cds Length = 1466 Score = 42.1 bits (21), Expect = 5.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 59 ctcttcttcctcctcgtcttc 79 ||||||||||||||||||||| Sbjct: 100 ctcttcttcctcctcgtcttc 80
>gb|BC060716.1| Mus musculus connector enhancer of kinase suppressor of Ras 2, mRNA (cDNA clone MGC:67575 IMAGE:6405389), complete cds Length = 5434 Score = 42.1 bits (21), Expect = 5.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 59 ctcttcttcctcctcgtcttcttcc 83 ||||||||||||||| ||||||||| Sbjct: 2925 ctcttcttcctcctcctcttcttcc 2901
>ref|NM_177751.2| Mus musculus connector enhancer of kinase suppressor of Ras 2 (Cnksr2), mRNA gb|BC043093.1| Mus musculus connector enhancer of kinase suppressor of Ras 2, mRNA (cDNA clone MGC:58012 IMAGE:6405389), complete cds Length = 5434 Score = 42.1 bits (21), Expect = 5.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 59 ctcttcttcctcctcgtcttcttcc 83 ||||||||||||||| ||||||||| Sbjct: 2925 ctcttcttcctcctcctcttcttcc 2901
>gb|AC159994.7| Mus musculus chromosome 7, clone RP23-368F23, complete sequence Length = 181238 Score = 42.1 bits (21), Expect = 5.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 59 ctcttcttcctcctcgtcttcttcc 83 ||||||||||||||| ||||||||| Sbjct: 126110 ctcttcttcctcctcttcttcttcc 126086
>gb|AC162389.6| Mus musculus 6 BAC RP24-114M8 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 189477 Score = 42.1 bits (21), Expect = 5.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 59 ctcttcttcctcctcgtcttcttcc 83 ||||||||||||||| ||||||||| Sbjct: 46997 ctcttcttcctcctcctcttcttcc 46973
>gb|AC134243.3| Mus musculus BAC clone RP24-90E15 from chromosome 17, complete sequence Length = 193151 Score = 42.1 bits (21), Expect = 5.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 59 ctcttcttcctcctcgtcttcttcc 83 ||||||||||||||| ||||||||| Sbjct: 113994 ctcttcttcctcctcttcttcttcc 113970
>gb|AC122458.3| Mus musculus BAC clone RP24-270D10 from chromosome 8, complete sequence Length = 185268 Score = 42.1 bits (21), Expect = 5.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 59 ctcttcttcctcctcgtcttcttcc 83 ||||||||||||||| ||||||||| Sbjct: 3096 ctcttcttcctcctcctcttcttcc 3120
>gb|AC140354.2| Mus musculus BAC clone RP24-249A13 from chromosome 12, complete sequence Length = 157998 Score = 42.1 bits (21), Expect = 5.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 59 ctcttcttcctcctcgtcttcttcc 83 ||||||||||||||| ||||||||| Sbjct: 62719 ctcttcttcctcctcctcttcttcc 62695
>gb|AC141426.3| Mus musculus BAC clone RP23-280I14 from chromosome 12, complete sequence Length = 227835 Score = 42.1 bits (21), Expect = 5.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 59 ctcttcttcctcctcgtcttcttcc 83 ||||||||||||||| ||||||||| Sbjct: 209800 ctcttcttcctcctcctcttcttcc 209776
>gb|AC110376.4| Mus musculus chromosome 12 clone RP23-441E7, complete sequence Length = 190516 Score = 42.1 bits (21), Expect = 5.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 59 ctcttcttcctcctcgtcttcttcc 83 ||||||||||||||| ||||||||| Sbjct: 5922 ctcttcttcctcctcctcttcttcc 5898
>gb|AC158983.2| Mus musculus BAC clone RP23-264L8 from chromosome 14, complete sequence Length = 218519 Score = 42.1 bits (21), Expect = 5.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 59 ctcttcttcctcctcgtcttcttcc 83 ||||||||||||||| ||||||||| Sbjct: 62540 ctcttcttcctcctcttcttcttcc 62564
>gb|AC150896.6| Mus musculus BAC clone RP23-414N3 from chromosome 1, complete sequence Length = 207503 Score = 42.1 bits (21), Expect = 5.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 59 ctcttcttcctcctcgtcttcttcc 83 ||||||||||||||| ||||||||| Sbjct: 197967 ctcttcttcctcctcctcttcttcc 197943
>gb|AC122282.5| Mus musculus BAC clone RP23-240B12 from chromosome 5, complete sequence Length = 227388 Score = 42.1 bits (21), Expect = 5.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 59 ctcttcttcctcctcgtcttcttcc 83 ||||||||||||||| ||||||||| Sbjct: 214667 ctcttcttcctcctcctcttcttcc 214691
>gb|AC114583.7| Mus musculus chromosome 1, clone RP23-195A24, complete sequence Length = 227529 Score = 42.1 bits (21), Expect = 5.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 58 tctcttcttcctcctcgtcttcttc 82 |||||||||||||||| |||||||| Sbjct: 106132 tctcttcttcctcctcctcttcttc 106156
>gb|AY557985.1| Saccharomyces cerevisiae clone FLH005233.01X YMR043W gene, complete cds Length = 861 Score = 42.1 bits (21), Expect = 5.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 63 tcttcctcctcgtcttcttcc 83 ||||||||||||||||||||| Sbjct: 320 tcttcctcctcgtcttcttcc 300
>ref|XM_857646.1| PREDICTED: Canis familiaris similar to PGC-1 related co-activator, transcript variant 2 (LOC477805), mRNA Length = 4914 Score = 42.1 bits (21), Expect = 5.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 59 ctcttcttcctcctcgtcttcttcc 83 ||||||||||||||| ||||||||| Sbjct: 4077 ctcttcttcctcctcatcttcttcc 4101
>ref|XM_534998.2| PREDICTED: Canis familiaris similar to PGC-1 related co-activator, transcript variant 1 (LOC477805), mRNA Length = 5283 Score = 42.1 bits (21), Expect = 5.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 59 ctcttcttcctcctcgtcttcttcc 83 ||||||||||||||| ||||||||| Sbjct: 4440 ctcttcttcctcctcatcttcttcc 4464
>gb|AC004593.1| Homo sapiens PAC clone RP5-964C11 from 7, complete sequence Length = 150221 Score = 42.1 bits (21), Expect = 5.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 59 ctcttcttcctcctcgtcttcttcc 83 ||||||||||||||| ||||||||| Sbjct: 118174 ctcttcttcctcctcttcttcttcc 118198
>gb|AC114676.7| Mus musculus chromosome 5, clone RP24-211H1, complete sequence Length = 153903 Score = 42.1 bits (21), Expect = 5.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 59 ctcttcttcctcctcgtcttcttcc 83 ||||||||||||||| ||||||||| Sbjct: 99656 ctcttcttcctcctcctcttcttcc 99632
>gb|AC120922.4| Rattus norvegicus 9 BAC CH230-104J1 (Children's Hospital Oakland Research Institute) complete sequence Length = 256354 Score = 42.1 bits (21), Expect = 5.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 59 ctcttcttcctcctcgtcttcttcc 83 ||||||||||||||| ||||||||| Sbjct: 7620 ctcttcttcctcctcttcttcttcc 7596 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 272,580,121 Number of extensions: 15769575 Number of successful extensions: 355246 Number of sequences better than 10.0: 453 Number of HSP's gapped: 355238 Number of HSP's successfully gapped: 517 Length of query: 1428 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1405 Effective length of database: 18,503,978,556 Effective search space: 25998089871180 Effective search space used: 25998089871180 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)
