ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf134e12
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1AK099024:Os04g0446300 353 7e-98
2AK071742:Os04g0446300 353 7e-98
3AK059953:Os04g0446300 353 7e-98
4AK102047:Os02g0565200 287 5e-78
5AK061593:Os02g0565200 287 5e-78
6AK073089:Os07g0106000 30 1.9
7AK064319:Os07g0106000 30 1.9
8Os01g0621300:Os01g0621300 29 4.1
9AK120761:Os08g0375900 28 5.4
10AK069663:Os08g0375900 28 5.4
11Os01g0240700:Os01g0240700 28 7.1
12AK111295:Os11g0671100 28 7.1
13AK108202:Os04g0637500 28 7.1
14AK106964:Os08g0502400 28 7.1
15AK108952: 28 9.3
16AK100485:Os11g0582300 28 9.3
17AK065661:Os11g0582300 28 9.3 
>AK099024:Os04g0446300 |
          Length = 192
 Score =  353 bits (906), Expect = 7e-98
 Identities = 172/192 (89%), Positives = 184/192 (95%)
 Frame = +2

Query: 47  MASDGAVATPAKVTPKKANLLDPHSIKHLLDETVSEVVKAKGYAENTRLGNWKLLIGTVV 226
           MASDGA ATPAK +PKKANLLDPHSIKHLLDET+S+VVK+KGYAE+TRLGNWKL IG  V
Sbjct: 1   MASDGAAATPAKASPKKANLLDPHSIKHLLDETISDVVKSKGYAEDTRLGNWKLAIGAAV 60

Query: 227 IAIALLAQFYPKKFPQNREFLLGCIALYVVMNVVLLILSYTKEKDAIIFTHPPAGSFNNT 406
           IAIALLAQFYPKKFPQNREFLLGCIALYVV+NVVLLILSYTKEKDAI+FTHPPAGSFN+T
Sbjct: 61  IAIALLAQFYPKKFPQNREFLLGCIALYVVLNVVLLILSYTKEKDAIMFTHPPAGSFNST 120

Query: 407 GLVISSKLPRFSDMYNLSIASADPESISAHKPVHFTKSVTKWFTKEGVLVEGLFWKDVER 586
           GLVISSKLPRFSDMY ++IASADP+SISA+KPVHFTKSVTKWFTKEGVLVEGLFWKDVER
Sbjct: 121 GLVISSKLPRFSDMYTITIASADPQSISANKPVHFTKSVTKWFTKEGVLVEGLFWKDVER 180

Query: 587 LIDDYNNERKSK 622
           LIDDYN ERK K
Sbjct: 181 LIDDYNTERKGK 192
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>AK071742:Os04g0446300 |
          Length = 192

 Score =  353 bits (906), Expect = 7e-98
 Identities = 172/192 (89%), Positives = 184/192 (95%)
 Frame = +2

Query: 47  MASDGAVATPAKVTPKKANLLDPHSIKHLLDETVSEVVKAKGYAENTRLGNWKLLIGTVV 226
           MASDGA ATPAK +PKKANLLDPHSIKHLLDET+S+VVK+KGYAE+TRLGNWKL IG  V
Sbjct: 1   MASDGAAATPAKASPKKANLLDPHSIKHLLDETISDVVKSKGYAEDTRLGNWKLAIGAAV 60

Query: 227 IAIALLAQFYPKKFPQNREFLLGCIALYVVMNVVLLILSYTKEKDAIIFTHPPAGSFNNT 406
           IAIALLAQFYPKKFPQNREFLLGCIALYVV+NVVLLILSYTKEKDAI+FTHPPAGSFN+T
Sbjct: 61  IAIALLAQFYPKKFPQNREFLLGCIALYVVLNVVLLILSYTKEKDAIMFTHPPAGSFNST 120

Query: 407 GLVISSKLPRFSDMYNLSIASADPESISAHKPVHFTKSVTKWFTKEGVLVEGLFWKDVER 586
           GLVISSKLPRFSDMY ++IASADP+SISA+KPVHFTKSVTKWFTKEGVLVEGLFWKDVER
Sbjct: 121 GLVISSKLPRFSDMYTITIASADPQSISANKPVHFTKSVTKWFTKEGVLVEGLFWKDVER 180

Query: 587 LIDDYNNERKSK 622
           LIDDYN ERK K
Sbjct: 181 LIDDYNTERKGK 192
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>AK059953:Os04g0446300 |
          Length = 192

 Score =  353 bits (906), Expect = 7e-98
 Identities = 172/192 (89%), Positives = 184/192 (95%)
 Frame = +2

Query: 47  MASDGAVATPAKVTPKKANLLDPHSIKHLLDETVSEVVKAKGYAENTRLGNWKLLIGTVV 226
           MASDGA ATPAK +PKKANLLDPHSIKHLLDET+S+VVK+KGYAE+TRLGNWKL IG  V
Sbjct: 1   MASDGAAATPAKASPKKANLLDPHSIKHLLDETISDVVKSKGYAEDTRLGNWKLAIGAAV 60

Query: 227 IAIALLAQFYPKKFPQNREFLLGCIALYVVMNVVLLILSYTKEKDAIIFTHPPAGSFNNT 406
           IAIALLAQFYPKKFPQNREFLLGCIALYVV+NVVLLILSYTKEKDAI+FTHPPAGSFN+T
Sbjct: 61  IAIALLAQFYPKKFPQNREFLLGCIALYVVLNVVLLILSYTKEKDAIMFTHPPAGSFNST 120

Query: 407 GLVISSKLPRFSDMYNLSIASADPESISAHKPVHFTKSVTKWFTKEGVLVEGLFWKDVER 586
           GLVISSKLPRFSDMY ++IASADP+SISA+KPVHFTKSVTKWFTKEGVLVEGLFWKDVER
Sbjct: 121 GLVISSKLPRFSDMYTITIASADPQSISANKPVHFTKSVTKWFTKEGVLVEGLFWKDVER 180

Query: 587 LIDDYNNERKSK 622
           LIDDYN ERK K
Sbjct: 181 LIDDYNTERKGK 192
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>AK102047:Os02g0565200 |
          Length = 191

 Score =  287 bits (735), Expect = 5e-78
 Identities = 140/192 (72%), Positives = 165/192 (85%)
 Frame = +2

Query: 47  MASDGAVATPAKVTPKKANLLDPHSIKHLLDETVSEVVKAKGYAENTRLGNWKLLIGTVV 226
           MA+DG  ATP+    KKANLLDP+SIKHLLDETVSEV K+KGY E+ RL N +L +G  V
Sbjct: 1   MATDGGGATPSPAA-KKANLLDPYSIKHLLDETVSEVAKSKGYPEDARLSNRRLAVGAAV 59

Query: 227 IAIALLAQFYPKKFPQNREFLLGCIALYVVMNVVLLILSYTKEKDAIIFTHPPAGSFNNT 406
           IA+ALLAQFYP+KFP+NR+ LL CIALY  +NV L I++YTKEK+AI+FT+PPAGSFN T
Sbjct: 60  IAVALLAQFYPRKFPENRDVLLACIALYAALNVALQIVTYTKEKNAILFTYPPAGSFNRT 119

Query: 407 GLVISSKLPRFSDMYNLSIASADPESISAHKPVHFTKSVTKWFTKEGVLVEGLFWKDVER 586
           GLVISSKLPR SDMY L+IASADP S S+ +PVHFTKSVTKWFTK+GVLVEGLFWKDVE+
Sbjct: 120 GLVISSKLPRLSDMYTLTIASADPHSKSSSEPVHFTKSVTKWFTKDGVLVEGLFWKDVEK 179

Query: 587 LIDDYNNERKSK 622
           LIDDYN++ +SK
Sbjct: 180 LIDDYNSDHRSK 191
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>AK061593:Os02g0565200 |
          Length = 191

 Score =  287 bits (735), Expect = 5e-78
 Identities = 140/192 (72%), Positives = 165/192 (85%)
 Frame = +2

Query: 47  MASDGAVATPAKVTPKKANLLDPHSIKHLLDETVSEVVKAKGYAENTRLGNWKLLIGTVV 226
           MA+DG  ATP+    KKANLLDP+SIKHLLDETVSEV K+KGY E+ RL N +L +G  V
Sbjct: 1   MATDGGGATPSPAA-KKANLLDPYSIKHLLDETVSEVAKSKGYPEDARLSNRRLAVGAAV 59

Query: 227 IAIALLAQFYPKKFPQNREFLLGCIALYVVMNVVLLILSYTKEKDAIIFTHPPAGSFNNT 406
           IA+ALLAQFYP+KFP+NR+ LL CIALY  +NV L I++YTKEK+AI+FT+PPAGSFN T
Sbjct: 60  IAVALLAQFYPRKFPENRDVLLACIALYAALNVALQIVTYTKEKNAILFTYPPAGSFNRT 119

Query: 407 GLVISSKLPRFSDMYNLSIASADPESISAHKPVHFTKSVTKWFTKEGVLVEGLFWKDVER 586
           GLVISSKLPR SDMY L+IASADP S S+ +PVHFTKSVTKWFTK+GVLVEGLFWKDVE+
Sbjct: 120 GLVISSKLPRLSDMYTLTIASADPHSKSSSEPVHFTKSVTKWFTKDGVLVEGLFWKDVEK 179

Query: 587 LIDDYNNERKSK 622
           LIDDYN++ +SK
Sbjct: 180 LIDDYNSDHRSK 191
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>AK073089:Os07g0106000 |
          Length = 1016

 Score = 30.0 bits (66), Expect = 1.9
 Identities = 23/82 (28%), Positives = 34/82 (41%)
 Frame = +2

Query: 437 FSDMYNLSIASADPESISAHKPVHFTKSVTKWFTKEGVLVEGLFWKDVERLIDDYNNERK 616
           F+++    I   D   +  H+P      +  W+ KE         K+V  LI DY N R 
Sbjct: 557 FAELCRNKIGENDSVIVMTHEP----NWLLDWYWKETT------GKNVSHLIQDYLNGRC 606

Query: 617 SK*ITGPCHHYQDELSLIEIDN 682
              + G  HH+    S  +IDN
Sbjct: 607 KLRLAGDLHHFMRH-SANQIDN 627
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>AK064319:Os07g0106000 |
          Length = 467

 Score = 30.0 bits (66), Expect = 1.9
 Identities = 23/82 (28%), Positives = 34/82 (41%)
 Frame = +2

Query: 437 FSDMYNLSIASADPESISAHKPVHFTKSVTKWFTKEGVLVEGLFWKDVERLIDDYNNERK 616
           F+++    I   D   +  H+P      +  W+ KE         K+V  LI DY N R 
Sbjct: 8   FAELCRNKIGENDSVIVMTHEP----NWLLDWYWKETT------GKNVSHLIQDYLNGRC 57

Query: 617 SK*ITGPCHHYQDELSLIEIDN 682
              + G  HH+    S  +IDN
Sbjct: 58  KLRLAGDLHHFMRH-SANQIDN 78
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>Os01g0621300:Os01g0621300 |
          Length = 827

 Score = 28.9 bits (63), Expect = 4.1
 Identities = 12/29 (41%), Positives = 15/29 (51%)
 Frame = -3

Query: 626 FICSCAHCCSHQSVSQRPSRTGPPQEHLP 540
           + CSC HC   Q       RT P +EH+P
Sbjct: 147 YTCSCPHCLHGQ-------RTAPQEEHIP 168
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>AK120761:Os08g0375900 |
          Length = 120

 Score = 28.5 bits (62), Expect = 5.4
 Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
 Frame = +2

Query: 11  HRPAPSPSTTAQMASDGAVATPAKV--TPKKANLL 109
           HRP PSP   A   S  A A PA++   P++A +L
Sbjct: 28  HRPRPSPYAAAAAPSPDAAAPPAELLFRPRRAAVL 62
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>AK069663:Os08g0375900 |
          Length = 250

 Score = 28.5 bits (62), Expect = 5.4
 Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
 Frame = +2

Query: 11  HRPAPSPSTTAQMASDGAVATPAKV--TPKKANLL 109
           HRP PSP   A   S  A A PA++   P++A +L
Sbjct: 28  HRPRPSPYAAAAAPSPDAAAPPAELLFRPRRAAVL 62
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>Os01g0240700:Os01g0240700 |
          Length = 1373

 Score = 28.1 bits (61), Expect = 7.1
 Identities = 22/66 (33%), Positives = 30/66 (45%), Gaps = 10/66 (15%)
 Frame = +2

Query: 383 PAGSFNNTGLVISSKLPRFSDMYNLSI----------ASADPESISAHKPVHFTKSVTKW 532
           PAG+   TGL I S LP  S++  L+I          +  DPE   A  P  F  ++ + 
Sbjct: 547 PAGAGRLTGLYICSALPILSNITALTICGNSLKGSDCSRFDPEGQGAPTPCGFGATLRRE 606

Query: 533 FTKEGV 550
              EGV
Sbjct: 607 EALEGV 612
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>AK111295:Os11g0671100 |
          Length = 97

 Score = 28.1 bits (61), Expect = 7.1
 Identities = 16/49 (32%), Positives = 29/49 (59%)
 Frame = +2

Query: 17  PAPSPSTTAQMASDGAVATPAKVTPKKANLLDPHSIKHLLDETVSEVVK 163
           PA SP+++   AS  +  TP + +P++ +L    +I+   D + SE+VK
Sbjct: 41  PAASPASSGSSASTASACTPPR-SPRRRHL----NIQRFSDGSESEIVK 84
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>AK108202:Os04g0637500 |
          Length = 393

 Score = 28.1 bits (61), Expect = 7.1
 Identities = 25/84 (29%), Positives = 35/84 (41%), Gaps = 10/84 (11%)
 Frame = +2

Query: 281 EFLL---GCIALYVVMNVVLLILSYTKEK-------DAIIFTHPPAGSFNNTGLVISSKL 430
           EFL+   GC A ++V N VLL LS  K         +A+       G   N G V+    
Sbjct: 300 EFLMAEAGCDATHIVTNPVLLTLSLGKRMAPRCRVVEALRSRGVGIGKKANLGSVMRYPE 359

Query: 431 PRFSDMYNLSIASADPESISAHKP 502
            +F + Y L      PE +  + P
Sbjct: 360 DKFVERYVLRYKEEVPELLELYPP 383
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>AK106964:Os08g0502400 |
          Length = 274

 Score = 28.1 bits (61), Expect = 7.1
 Identities = 13/31 (41%), Positives = 18/31 (58%)
 Frame = +2

Query: 8   PHRPAPSPSTTAQMASDGAVATPAKVTPKKA 100
           P  P+P+P+  A+ ASD A   P K +  KA
Sbjct: 205 PMAPSPAPAPDAKPASDAASPLPGKSSSAKA 235
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>AK108952: |
          Length = 496

 Score = 27.7 bits (60), Expect = 9.3
 Identities = 16/61 (26%), Positives = 30/61 (49%)
 Frame = +2

Query: 395 FNNTGLVISSKLPRFSDMYNLSIASADPESISAHKPVHFTKSVTKWFTKEGVLVEGLFWK 574
           +++ G ++  + P+     +++  + DP  +  HK  ++ KSV         LV GLFW 
Sbjct: 180 YSHLGWMVMKQNPKRIGRTDITDLNEDPVVVWQHK--NYIKSVVFMGLVSPTLVSGLFWG 237

Query: 575 D 577
           D
Sbjct: 238 D 238
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>AK100485:Os11g0582300 |
          Length = 823

 Score = 27.7 bits (60), Expect = 9.3
 Identities = 38/165 (23%), Positives = 60/165 (36%), Gaps = 4/165 (2%)
 Frame = +2

Query: 26   SPSTTAQMASDGAVATPAKVTPKKANLLDPHSIKHLLD----ETVSEVVKAKGYAENTRL 193
            S   + +  SD   ++  +   +K  L+ P   K +      ET   V +A    E  R 
Sbjct: 624  SQKRSIEFTSDPLASSTWEEVSEKNTLITPVQCKSIWRQFNAETEYAVAQAISMQEAHRR 683

Query: 194  GNWKLLIGTVVIAIALLAQFYPKKFPQNREFLLGCIALYVVMNVVLLILSYTKEKDAIIF 373
             N  L     V+ +A+L         +N  +LLG    +VV     L    T       F
Sbjct: 684  SNNWLPPAWTVLLLAILGYNEFIFLLRNPLYLLGLFVAFVVSYAAWLQYDITA-----YF 738

Query: 374  THPPAGSFNNTGLVISSKLPRFSDMYNLSIASADPESISAHKPVH 508
             H   G+ +    + S  LP   D+    I  +  +  S+H P H
Sbjct: 739  RH---GTLSGLLTITSGFLPTIMDIITAVINMSHNQKSSSHPPRH 780
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>AK065661:Os11g0582300 |
          Length = 536

 Score = 27.7 bits (60), Expect = 9.3
 Identities = 38/165 (23%), Positives = 60/165 (36%), Gaps = 4/165 (2%)
 Frame = +2

Query: 26  SPSTTAQMASDGAVATPAKVTPKKANLLDPHSIKHLLD----ETVSEVVKAKGYAENTRL 193
           S   + +  SD   ++  +   +K  L+ P   K +      ET   V +A    E  R 
Sbjct: 337 SQKRSIEFTSDPLASSTWEEVSEKNTLITPVQCKSIWRQFNAETEYAVAQAISMQEAHRR 396

Query: 194 GNWKLLIGTVVIAIALLAQFYPKKFPQNREFLLGCIALYVVMNVVLLILSYTKEKDAIIF 373
            N  L     V+ +A+L         +N  +LLG    +VV     L    T       F
Sbjct: 397 SNNWLPPAWTVLLLAILGYNEFIFLLRNPLYLLGLFVAFVVSYAAWLQYDITA-----YF 451

Query: 374 THPPAGSFNNTGLVISSKLPRFSDMYNLSIASADPESISAHKPVH 508
            H   G+ +    + S  LP   D+    I  +  +  S+H P H
Sbjct: 452 RH---GTLSGLLTITSGFLPTIMDIITAVINMSHNQKSSSHPPRH 493


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 18,555,253
Number of extensions: 408660
Number of successful extensions: 1455
Number of sequences better than 10.0: 17
Number of HSP's gapped: 1453
Number of HSP's successfully gapped: 17
Length of query: 260
Length of database: 15,399,855
Length adjustment: 99
Effective length of query: 161
Effective length of database: 11,435,796
Effective search space: 1841163156
Effective search space used: 1841163156
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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