ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf134c21
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1AK119720:Os04g0445200 31 0.55
2AK062427:Os04g0445200 31 0.55
3AK110196:Os05g0516400 30 1.2
4AK111270:Os12g0545900 29 2.1
5AK100176:Os12g0545900 29 2.1
6AK071577:Os12g0545900 29 2.1
7Os08g0529300:Os08g0529300 28 6.1
8AK066681:Os11g0630300 27 7.9 
>AK119720:Os04g0445200 |
          Length = 154
 Score = 31.2 bits (69), Expect = 0.55
 Identities = 14/29 (48%), Positives = 17/29 (58%)
 Frame = -3

Query: 94  HTTTMADLLCFCSKQRRGRRREKVAAARR 8
           HTTT   L C C+   RG RR ++A A R
Sbjct: 17  HTTTTGRLSCACAPPTRGTRRRRLAVAVR 45
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>AK062427:Os04g0445200 |
          Length = 154

 Score = 31.2 bits (69), Expect = 0.55
 Identities = 14/29 (48%), Positives = 17/29 (58%)
 Frame = -3

Query: 94  HTTTMADLLCFCSKQRRGRRREKVAAARR 8
           HTTT   L C C+   RG RR ++A A R
Sbjct: 17  HTTTTGRLSCACAPPTRGTRRRRLAVAVR 45
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>AK110196:Os05g0516400 |
          Length = 827

 Score = 30.0 bits (66), Expect = 1.2
 Identities = 12/18 (66%), Positives = 15/18 (83%)
 Frame = -3

Query: 79  ADLLCFCSKQRRGRRREK 26
           A LLCFCS++RR RRR +
Sbjct: 314 AGLLCFCSRRRRRRRRRQ 331
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>AK111270:Os12g0545900 |
          Length = 108

 Score = 29.3 bits (64), Expect = 2.1
 Identities = 12/19 (63%), Positives = 13/19 (68%)
 Frame = +2

Query: 2  RVPPRRRHFLPSSPSPLFR 58
          R PP RRH LP SP+P  R
Sbjct: 27 RKPPGRRHLLPPSPAPTSR 45
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>AK100176:Os12g0545900 |
          Length = 108

 Score = 29.3 bits (64), Expect = 2.1
 Identities = 12/19 (63%), Positives = 13/19 (68%)
 Frame = +2

Query: 2  RVPPRRRHFLPSSPSPLFR 58
          R PP RRH LP SP+P  R
Sbjct: 27 RKPPGRRHLLPPSPAPTSR 45
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>AK071577:Os12g0545900 |
          Length = 108

 Score = 29.3 bits (64), Expect = 2.1
 Identities = 12/19 (63%), Positives = 13/19 (68%)
 Frame = +2

Query: 2  RVPPRRRHFLPSSPSPLFR 58
          R PP RRH LP SP+P  R
Sbjct: 27 RKPPGRRHLLPPSPAPTSR 45
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>Os08g0529300:Os08g0529300 |
          Length = 510

 Score = 27.7 bits (60), Expect = 6.1
 Identities = 9/25 (36%), Positives = 18/25 (72%)
 Frame = -3

Query: 340 DLLHLYTGGRVVDHTMAMGTTTCYC 266
           D+++ ++  +VV+H +   TTTC+C
Sbjct: 311 DVVYTWSPWKVVEHDLRRKTTTCHC 335
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>AK066681:Os11g0630300 |
          Length = 100

 Score = 27.3 bits (59), Expect = 7.9
 Identities = 11/21 (52%), Positives = 15/21 (71%)
 Frame = -1

Query: 579 VIRFDLHSPQIKLQDPRYIYS 517
           +I F+ H+PQ KL DP Y+ S
Sbjct: 55  MIPFNEHTPQYKLGDPHYVES 75


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 13,906,693
Number of extensions: 264510
Number of successful extensions: 693
Number of sequences better than 10.0: 8
Number of HSP's gapped: 693
Number of HSP's successfully gapped: 8
Length of query: 200
Length of database: 15,399,855
Length adjustment: 96
Effective length of query: 104
Effective length of database: 11,555,919
Effective search space: 1201815576
Effective search space used: 1201815576
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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