ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf139c17
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1P32257:GAL11_KLULA Transcription regulatory protein GAL11 - Kluy... 34 0.91

>P32257:GAL11_KLULA Transcription regulatory protein GAL11 - Kluyveromyces lactis|
           (Yeast) (Candida sphaerica)
          Length = 1034
 Score = 34.3 bits (77), Expect = 0.91
 Identities = 34/110 (30%), Positives = 47/110 (42%), Gaps = 15/110 (13%)
 Frame = +2

Query: 146 DWRAQLQPEERSRVVN---QILDAMMK-NPPVSVPGRLNQLQIIADAIEDKFYAQATN-- 307
           DWR+ +  +ERS+ V    QIL  M + N        L +L+  A+  E   YA   +  
Sbjct: 3   DWRSTISTQERSQFVTELAQILADMSRINGGEKANFNLEKLKKSAEQFESSLYASCNSKD 62

Query: 308 -HSDYVRK-----ISLKLVSIETNGQ---QAHGNAQVIPNQNDSDGKQAH 430
            + D +RK      S K  SIE   Q   QA   AQ +  Q     +Q H
Sbjct: 63  LYLDAMRKRIAAMDSAKRKSIEAQRQKLAQAQAQAQAVQRQQQQQQQQHH 112


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 164,750,172
Number of extensions: 3144805
Number of successful extensions: 8059
Number of sequences better than 10.0: 1
Number of HSP's gapped: 8057
Number of HSP's successfully gapped: 1
Length of query: 359
Length of database: 100,686,439
Length adjustment: 114
Effective length of query: 245
Effective length of database: 69,416,809
Effective search space: 17007118205
Effective search space used: 17007118205
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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