| Clone Name | FLbaf133o17 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | O42701:NAH2_ZYGRO Na(+)/H(+) antiporter 2 - Zygosaccharomyces ro... | 30 | 4.5 | 2 | Q11194:YX23_CAEEL Uncharacterized protein C04E7.3 - Caenorhabdit... | 29 | 7.7 | 3 | P55416:TRAB_RHISN Probable conjugal transfer protein traB - Rhiz... | 29 | 7.7 |
|---|
>O42701:NAH2_ZYGRO Na(+)/H(+) antiporter 2 - Zygosaccharomyces rouxii (Candida mogii)| Length = 808 Score = 29.6 bits (65), Expect = 4.5 Identities = 21/61 (34%), Positives = 28/61 (45%), Gaps = 4/61 (6%) Frame = -2 Query: 387 HKR*GLAIKPQTLQIHQATNQQNVNPYHYQSSNNSAT--DRKG--FIQPRTSPIHGSRAK 220 H R AI P ++HQ TN+ N Y+ N D G F + R SP HG + K Sbjct: 684 HDRPKRAISPPLEKLHQITNEARKNKYYAYKVGNDLVIEDESGEVFRRYRISP-HGGKRK 742 Query: 219 L 217 + Sbjct: 743 I 743
>Q11194:YX23_CAEEL Uncharacterized protein C04E7.3 - Caenorhabditis elegans| Length = 518 Score = 28.9 bits (63), Expect = 7.7 Identities = 22/62 (35%), Positives = 27/62 (43%) Frame = -2 Query: 375 GLAIKPQTLQIHQATNQQNVNPYHYQSSNNSATDRKGFIQPRTSPIHGSRAKLAAPRLGA 196 GL +P L NQQ Y+ SN + DRK PR S + RA A P +G Sbjct: 58 GLVSRP--LNTGVGPNQQVQEQYN-AFSNQNENDRKMMEDPRESAVPNKRAAAAPPWIGY 114 Query: 195 HQ 190 Q Sbjct: 115 TQ 116
>P55416:TRAB_RHISN Probable conjugal transfer protein traB - Rhizobium sp. (strain| NGR234) Length = 387 Score = 28.9 bits (63), Expect = 7.7 Identities = 17/50 (34%), Positives = 24/50 (48%), Gaps = 7/50 (14%) Frame = +2 Query: 185 VIW-----CAPRRG--AASFALLPCMGLVRGWINPFLSVALLLLDW*WYG 313 V+W C P R AA +P MG+ GW +P + +L W W+G Sbjct: 96 VLWTKRSDCRPFRYLLAAVLMAVPPMGIT-GWAHPVTAAGILFPGWGWWG 144 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 61,387,668 Number of extensions: 1160155 Number of successful extensions: 2820 Number of sequences better than 10.0: 3 Number of HSP's gapped: 2820 Number of HSP's successfully gapped: 3 Length of query: 150 Length of database: 100,686,439 Length adjustment: 103 Effective length of query: 47 Effective length of database: 72,434,054 Effective search space: 3404400538 Effective search space used: 3404400538 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)