ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf133n04 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_001050946.1| Oryza sativa (japonica cultivar-group) Os01g0775600 (Os01g0775600) mRNA, partial cds Length = 1186 Score = 753 bits (380), Expect = 0.0 Identities = 596/668 (89%) Strand = Plus / Plus Query: 81 ccgccatgatggacctggatccccgcctctacgaggacgcctctgtcagcgataatgacg 140 ||||||||||||||||||||||||||||||||||| ||| ||| || || ||||| || | Sbjct: 156 ccgccatgatggacctggatccccgcctctacgagaacgtctccgtgagtgataacgatg 215 Query: 141 ttcgcaacatagtgctatcttatcttatgcacaattgttttaaggagaccgcagagacct 200 | |||||||||||| | ||||||||||||||||| |||||||||||||| || ||||| | Sbjct: 216 tccgcaacatagtgttgtcttatcttatgcacaactgttttaaggagactgctgagacat 275 Query: 201 tcctatccagcactgggttaaagttgcctgttgattatactgtagatgtggataagcgta 260 || ||||||||||||| || | ||||||||||||| ||||||||||| |||||||||| Sbjct: 276 tcttatccagcactggtttggaactgcctgttgattacactgtagatgtagataagcgta 335 Query: 261 aagcgatcttaaagtttgtggtggaaggggatgccgtgaaagccatagaactgacagaag 320 ||||||| || | |||||| ||||||| ||||| |||| || ||||| |||||||||| Sbjct: 336 aagcgatttttagttttgtgttggaaggcaatgccctgaaggctatagacctgacagaag 395 Query: 321 agttggcgcccaagttgctagagaatgacatggatttacattttgagcttttaagtctcc 380 ||||||| || || |||||||||||||| |||||||| |||||||| ||||||||||| | Sbjct: 396 agttggcacctaacttgctagagaatgatatggatttgcattttgatcttttaagtcttc 455 Query: 381 acttcattgagctaattcgttccagaaaatgcacagaagcacttgagtttggccagaaaa 440 ||||||||||| || ||||||| ||||||||||||||||| ||||||||||| ||||||| Sbjct: 456 acttcattgagttagttcgttctagaaaatgcacagaagctcttgagtttggtcagaaaa 515 Query: 441 aattgacgccctttggtaaagttgccaagtatgttgagcaattagaggactttatggccc 500 | |||||||| ||||| ||||| ||||||| |||||| || |||||||||||||||||| Sbjct: 516 agttgacgccatttgggaaagtgcccaagtacgttgagaaactagaggactttatggccc 575 Query: 501 ttctagcttatgaagagcctgagaagtcacctatgtttcatctactaaccccggagtata 560 | |||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| | Sbjct: 576 tcctagcttatgaagagcctgagaagtcacctatgtttcatctactaagcccagagtaca 635 Query: 561 ggcagaatgttgcagatagcttgaatcgggctattcttgcgcatgctaatctaccagcat 620 |||||||||||||||||||||||||||||||| ||||||| |||||||||| |||||||| Sbjct: 636 ggcagaatgttgcagatagcttgaatcgggctgttcttgcacatgctaatcgaccagcat 695 Query: 621 attcatcattggagagagttatacagcagtcgaccgtggttagacaatatctacatcagg 680 ||||||||||||||||||| |||||||| | || |||||||||||||| ||||| |||| Sbjct: 696 attcatcattggagagagtgatacagcaagcaactgtggttagacaatacctacagcagg 755 Query: 681 aagttgacaaggattcttacccaccgttttctttgaaggcctttctggacaagtaaggcg 740 |||||| ||||||||||||||| || ||||||||||||||||||||| |||||||||| | Sbjct: 756 aagttggcaaggattcttacccgccattttctttgaaggcctttctgaacaagtaaggtg 815 Query: 741 caaccaat 748 |||||||| Sbjct: 816 caaccaat 823
>dbj|AK122081.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033121A05, full insert sequence Length = 1187 Score = 753 bits (380), Expect = 0.0 Identities = 596/668 (89%) Strand = Plus / Plus Query: 81 ccgccatgatggacctggatccccgcctctacgaggacgcctctgtcagcgataatgacg 140 ||||||||||||||||||||||||||||||||||| ||| ||| || || ||||| || | Sbjct: 157 ccgccatgatggacctggatccccgcctctacgagaacgtctccgtgagtgataacgatg 216 Query: 141 ttcgcaacatagtgctatcttatcttatgcacaattgttttaaggagaccgcagagacct 200 | |||||||||||| | ||||||||||||||||| |||||||||||||| || ||||| | Sbjct: 217 tccgcaacatagtgttgtcttatcttatgcacaactgttttaaggagactgctgagacat 276 Query: 201 tcctatccagcactgggttaaagttgcctgttgattatactgtagatgtggataagcgta 260 || ||||||||||||| || | ||||||||||||| ||||||||||| |||||||||| Sbjct: 277 tcttatccagcactggtttggaactgcctgttgattacactgtagatgtagataagcgta 336 Query: 261 aagcgatcttaaagtttgtggtggaaggggatgccgtgaaagccatagaactgacagaag 320 ||||||| || | |||||| ||||||| ||||| |||| || ||||| |||||||||| Sbjct: 337 aagcgatttttagttttgtgttggaaggcaatgccctgaaggctatagacctgacagaag 396 Query: 321 agttggcgcccaagttgctagagaatgacatggatttacattttgagcttttaagtctcc 380 ||||||| || || |||||||||||||| |||||||| |||||||| ||||||||||| | Sbjct: 397 agttggcacctaacttgctagagaatgatatggatttgcattttgatcttttaagtcttc 456 Query: 381 acttcattgagctaattcgttccagaaaatgcacagaagcacttgagtttggccagaaaa 440 ||||||||||| || ||||||| ||||||||||||||||| ||||||||||| ||||||| Sbjct: 457 acttcattgagttagttcgttctagaaaatgcacagaagctcttgagtttggtcagaaaa 516 Query: 441 aattgacgccctttggtaaagttgccaagtatgttgagcaattagaggactttatggccc 500 | |||||||| ||||| ||||| ||||||| |||||| || |||||||||||||||||| Sbjct: 517 agttgacgccatttgggaaagtgcccaagtacgttgagaaactagaggactttatggccc 576 Query: 501 ttctagcttatgaagagcctgagaagtcacctatgtttcatctactaaccccggagtata 560 | |||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| | Sbjct: 577 tcctagcttatgaagagcctgagaagtcacctatgtttcatctactaagcccagagtaca 636 Query: 561 ggcagaatgttgcagatagcttgaatcgggctattcttgcgcatgctaatctaccagcat 620 |||||||||||||||||||||||||||||||| ||||||| |||||||||| |||||||| Sbjct: 637 ggcagaatgttgcagatagcttgaatcgggctgttcttgcacatgctaatcgaccagcat 696 Query: 621 attcatcattggagagagttatacagcagtcgaccgtggttagacaatatctacatcagg 680 ||||||||||||||||||| |||||||| | || |||||||||||||| ||||| |||| Sbjct: 697 attcatcattggagagagtgatacagcaagcaactgtggttagacaatacctacagcagg 756 Query: 681 aagttgacaaggattcttacccaccgttttctttgaaggcctttctggacaagtaaggcg 740 |||||| ||||||||||||||| || ||||||||||||||||||||| |||||||||| | Sbjct: 757 aagttggcaaggattcttacccgccattttctttgaaggcctttctgaacaagtaaggtg 816 Query: 741 caaccaat 748 |||||||| Sbjct: 817 caaccaat 824
>dbj|AK060390.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-009-H03, full insert sequence Length = 1161 Score = 753 bits (380), Expect = 0.0 Identities = 596/668 (89%) Strand = Plus / Plus Query: 81 ccgccatgatggacctggatccccgcctctacgaggacgcctctgtcagcgataatgacg 140 ||||||||||||||||||||||||||||||||||| ||| ||| || || ||||| || | Sbjct: 129 ccgccatgatggacctggatccccgcctctacgagaacgtctccgtgagtgataacgatg 188 Query: 141 ttcgcaacatagtgctatcttatcttatgcacaattgttttaaggagaccgcagagacct 200 | |||||||||||| | ||||||||||||||||| |||||||||||||| || ||||| | Sbjct: 189 tccgcaacatagtgttgtcttatcttatgcacaactgttttaaggagactgctgagacat 248 Query: 201 tcctatccagcactgggttaaagttgcctgttgattatactgtagatgtggataagcgta 260 || ||||||||||||| || | ||||||||||||| ||||||||||| |||||||||| Sbjct: 249 tcttatccagcactggtttggaactgcctgttgattacactgtagatgtagataagcgta 308 Query: 261 aagcgatcttaaagtttgtggtggaaggggatgccgtgaaagccatagaactgacagaag 320 ||||||| || | |||||| ||||||| ||||| |||| || ||||| |||||||||| Sbjct: 309 aagcgatttttagttttgtgttggaaggcaatgccctgaaggctatagacctgacagaag 368 Query: 321 agttggcgcccaagttgctagagaatgacatggatttacattttgagcttttaagtctcc 380 ||||||| || || |||||||||||||| |||||||| |||||||| ||||||||||| | Sbjct: 369 agttggcacctaacttgctagagaatgatatggatttgcattttgatcttttaagtcttc 428 Query: 381 acttcattgagctaattcgttccagaaaatgcacagaagcacttgagtttggccagaaaa 440 ||||||||||| || ||||||| ||||||||||||||||| ||||||||||| ||||||| Sbjct: 429 acttcattgagttagttcgttctagaaaatgcacagaagctcttgagtttggtcagaaaa 488 Query: 441 aattgacgccctttggtaaagttgccaagtatgttgagcaattagaggactttatggccc 500 | |||||||| ||||| ||||| ||||||| |||||| || |||||||||||||||||| Sbjct: 489 agttgacgccatttgggaaagtgcccaagtacgttgagaaactagaggactttatggccc 548 Query: 501 ttctagcttatgaagagcctgagaagtcacctatgtttcatctactaaccccggagtata 560 | |||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| | Sbjct: 549 tcctagcttatgaagagcctgagaagtcacctatgtttcatctactaagcccagagtaca 608 Query: 561 ggcagaatgttgcagatagcttgaatcgggctattcttgcgcatgctaatctaccagcat 620 |||||||||||||||||||||||||||||||| ||||||| |||||||||| |||||||| Sbjct: 609 ggcagaatgttgcagatagcttgaatcgggctgttcttgcacatgctaatcgaccagcat 668 Query: 621 attcatcattggagagagttatacagcagtcgaccgtggttagacaatatctacatcagg 680 ||||||||||||||||||| |||||||| | || |||||||||||||| ||||| |||| Sbjct: 669 attcatcattggagagagtgatacagcaagcaactgtggttagacaatacctacagcagg 728 Query: 681 aagttgacaaggattcttacccaccgttttctttgaaggcctttctggacaagtaaggcg 740 |||||| ||||||||||||||| || ||||||||||||||||||||| |||||||||| | Sbjct: 729 aagttggcaaggattcttacccgccattttctttgaaggcctttctgaacaagtaaggtg 788 Query: 741 caaccaat 748 |||||||| Sbjct: 789 caaccaat 796
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 186 bits (94), Expect = 1e-43 Identities = 109/114 (95%) Strand = Plus / Minus Query: 486 aggactttatggcccttctagcttatgaagagcctgagaagtcacctatgtttcatctac 545 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 32809335 aggactttatggccctcctagcttatgaagagcctgagaagtcacctatgtttcatctac 32809276 Query: 546 taaccccggagtataggcagaatgttgcagatagcttgaatcgggctattcttg 599 ||| ||| ||||| ||||||||||||||||||||||||||||||||| |||||| Sbjct: 32809275 taagcccagagtacaggcagaatgttgcagatagcttgaatcgggctgttcttg 32809222 Score = 137 bits (69), Expect = 9e-29 Identities = 120/137 (87%) Strand = Plus / Minus Query: 275 tttgtggtggaaggggatgccgtgaaagccatagaactgacagaagagttggcgcccaag 334 |||||| ||||||| ||||| |||| || ||||| ||||||||||||||||| || || Sbjct: 32810290 tttgtgttggaaggcaatgccctgaaggctatagacctgacagaagagttggcacctaac 32810231 Query: 335 ttgctagagaatgacatggatttacattttgagcttttaagtctccacttcattgagcta 394 |||||||||||||| |||||||| |||||||| ||||||||||| |||||||||||| || Sbjct: 32810230 ttgctagagaatgatatggatttgcattttgatcttttaagtcttcacttcattgagtta 32810171 Query: 395 attcgttccagaaaatg 411 ||||||| |||||||| Sbjct: 32810170 gttcgttctagaaaatg 32810154 Score = 129 bits (65), Expect = 2e-26 Identities = 107/121 (88%) Strand = Plus / Minus Query: 143 cgcaacatagtgctatcttatcttatgcacaattgttttaaggagaccgcagagaccttc 202 |||||||||||| | ||||||||||||||||| |||||||||||||| || ||||| ||| Sbjct: 32811315 cgcaacatagtgttgtcttatcttatgcacaactgttttaaggagactgctgagacattc 32811256 Query: 203 ctatccagcactgggttaaagttgcctgttgattatactgtagatgtggataagcgtaaa 262 ||||||||||||| || | ||||||||||||| ||||||||||| |||||||||||| Sbjct: 32811255 ttatccagcactggtttggaactgcctgttgattacactgtagatgtagataagcgtaaa 32811196 Query: 263 g 263 | Sbjct: 32811195 g 32811195 Score = 109 bits (55), Expect = 2e-20 Identities = 82/91 (90%) Strand = Plus / Minus Query: 602 catgctaatctaccagcatattcatcattggagagagttatacagcagtcgaccgtggtt 661 |||||||||| ||||||||||||||||||||||||||| |||||||| | || |||||| Sbjct: 32809116 catgctaatcgaccagcatattcatcattggagagagtgatacagcaagcaactgtggtt 32809057 Query: 662 agacaatatctacatcaggaagttgacaagg 692 |||||||| ||||| |||||||||| ||||| Sbjct: 32809056 agacaatacctacagcaggaagttggcaagg 32809026 Score = 85.7 bits (43), Expect = 3e-13 Identities = 55/59 (93%) Strand = Plus / Minus Query: 690 aggattcttacccaccgttttctttgaaggcctttctggacaagtaaggcgcaaccaat 748 ||||||||||||| || ||||||||||||||||||||| |||||||||| ||||||||| Sbjct: 32808792 aggattcttacccgccattttctttgaaggcctttctgaacaagtaaggtgcaaccaat 32808734 Score = 75.8 bits (38), Expect = 3e-10 Identities = 68/78 (87%) Strand = Plus / Minus Query: 411 gcacagaagcacttgagtttggccagaaaaaattgacgccctttggtaaagttgccaagt 470 |||||||||| ||||||||||| |||||||| |||||||| ||||| ||||| |||||| Sbjct: 32810079 gcacagaagctcttgagtttggtcagaaaaagttgacgccatttgggaaagtgcccaagt 32810020 Query: 471 atgttgagcaattagagg 488 | |||||| || |||||| Sbjct: 32810019 acgttgagaaactagagg 32810002 Score = 69.9 bits (35), Expect = 2e-08 Identities = 35/35 (100%) Strand = Plus / Minus Query: 81 ccgccatgatggacctggatccccgcctctacgag 115 ||||||||||||||||||||||||||||||||||| Sbjct: 32812555 ccgccatgatggacctggatccccgcctctacgag 32812521
>dbj|AP003344.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0413G02 Length = 155633 Score = 186 bits (94), Expect = 1e-43 Identities = 109/114 (95%) Strand = Plus / Minus Query: 486 aggactttatggcccttctagcttatgaagagcctgagaagtcacctatgtttcatctac 545 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 30740 aggactttatggccctcctagcttatgaagagcctgagaagtcacctatgtttcatctac 30681 Query: 546 taaccccggagtataggcagaatgttgcagatagcttgaatcgggctattcttg 599 ||| ||| ||||| ||||||||||||||||||||||||||||||||| |||||| Sbjct: 30680 taagcccagagtacaggcagaatgttgcagatagcttgaatcgggctgttcttg 30627 Score = 137 bits (69), Expect = 9e-29 Identities = 120/137 (87%) Strand = Plus / Minus Query: 275 tttgtggtggaaggggatgccgtgaaagccatagaactgacagaagagttggcgcccaag 334 |||||| ||||||| ||||| |||| || ||||| ||||||||||||||||| || || Sbjct: 31695 tttgtgttggaaggcaatgccctgaaggctatagacctgacagaagagttggcacctaac 31636 Query: 335 ttgctagagaatgacatggatttacattttgagcttttaagtctccacttcattgagcta 394 |||||||||||||| |||||||| |||||||| ||||||||||| |||||||||||| || Sbjct: 31635 ttgctagagaatgatatggatttgcattttgatcttttaagtcttcacttcattgagtta 31576 Query: 395 attcgttccagaaaatg 411 ||||||| |||||||| Sbjct: 31575 gttcgttctagaaaatg 31559 Score = 129 bits (65), Expect = 2e-26 Identities = 107/121 (88%) Strand = Plus / Minus Query: 143 cgcaacatagtgctatcttatcttatgcacaattgttttaaggagaccgcagagaccttc 202 |||||||||||| | ||||||||||||||||| |||||||||||||| || ||||| ||| Sbjct: 32720 cgcaacatagtgttgtcttatcttatgcacaactgttttaaggagactgctgagacattc 32661 Query: 203 ctatccagcactgggttaaagttgcctgttgattatactgtagatgtggataagcgtaaa 262 ||||||||||||| || | ||||||||||||| ||||||||||| |||||||||||| Sbjct: 32660 ttatccagcactggtttggaactgcctgttgattacactgtagatgtagataagcgtaaa 32601 Query: 263 g 263 | Sbjct: 32600 g 32600 Score = 109 bits (55), Expect = 2e-20 Identities = 82/91 (90%) Strand = Plus / Minus Query: 602 catgctaatctaccagcatattcatcattggagagagttatacagcagtcgaccgtggtt 661 |||||||||| ||||||||||||||||||||||||||| |||||||| | || |||||| Sbjct: 30521 catgctaatcgaccagcatattcatcattggagagagtgatacagcaagcaactgtggtt 30462 Query: 662 agacaatatctacatcaggaagttgacaagg 692 |||||||| ||||| |||||||||| ||||| Sbjct: 30461 agacaatacctacagcaggaagttggcaagg 30431 Score = 85.7 bits (43), Expect = 3e-13 Identities = 55/59 (93%) Strand = Plus / Minus Query: 690 aggattcttacccaccgttttctttgaaggcctttctggacaagtaaggcgcaaccaat 748 ||||||||||||| || ||||||||||||||||||||| |||||||||| ||||||||| Sbjct: 30197 aggattcttacccgccattttctttgaaggcctttctgaacaagtaaggtgcaaccaat 30139 Score = 75.8 bits (38), Expect = 3e-10 Identities = 68/78 (87%) Strand = Plus / Minus Query: 411 gcacagaagcacttgagtttggccagaaaaaattgacgccctttggtaaagttgccaagt 470 |||||||||| ||||||||||| |||||||| |||||||| ||||| ||||| |||||| Sbjct: 31484 gcacagaagctcttgagtttggtcagaaaaagttgacgccatttgggaaagtgcccaagt 31425 Query: 471 atgttgagcaattagagg 488 | |||||| || |||||| Sbjct: 31424 acgttgagaaactagagg 31407 Score = 69.9 bits (35), Expect = 2e-08 Identities = 35/35 (100%) Strand = Plus / Minus Query: 81 ccgccatgatggacctggatccccgcctctacgag 115 ||||||||||||||||||||||||||||||||||| Sbjct: 33960 ccgccatgatggacctggatccccgcctctacgag 33926
>gb|AY108682.1| Zea mays PCO062018 mRNA sequence Length = 562 Score = 127 bits (64), Expect = 9e-26 Identities = 106/120 (88%) Strand = Plus / Plus Query: 617 gcatattcatcattggagagagttatacagcagtcgaccgtggttagacaatatctacat 676 ||||||||||| |||||||| || | ||||| |||| |||||||||||||| ||||| Sbjct: 1 gcatattcatcgttggagagggtggtccagcaagcgactgtggttagacaatacctacag 60 Query: 677 caggaagttgacaaggattcttacccaccgttttctttgaaggcctttctggacaagtaa 736 |||||||||| |||||||||||||||||| ||||||||||||||||||||| ||||||| Sbjct: 61 caggaagttggcaaggattcttacccaccattttctttgaaggcctttctgagcaagtaa 120
>emb|CR361552.19| Zebrafish DNA sequence from clone CH211-239J15 in linkage group 22, complete sequence Length = 166346 Score = 44.1 bits (22), Expect = 1.0 Identities = 22/22 (100%) Strand = Plus / Minus Query: 353 gatttacattttgagcttttaa 374 |||||||||||||||||||||| Sbjct: 106432 gatttacattttgagcttttaa 106411
>emb|BX649488.9| Zebrafish DNA sequence from clone DKEY-21O6 in linkage group 22, complete sequence Length = 183230 Score = 44.1 bits (22), Expect = 1.0 Identities = 22/22 (100%) Strand = Plus / Plus Query: 353 gatttacattttgagcttttaa 374 |||||||||||||||||||||| Sbjct: 155417 gatttacattttgagcttttaa 155438
>gb|AC093399.6| Homo sapiens BAC clone RP13-625I15 from 2, complete sequence Length = 33471 Score = 44.1 bits (22), Expect = 1.0 Identities = 22/22 (100%) Strand = Plus / Minus Query: 618 catattcatcattggagagagt 639 |||||||||||||||||||||| Sbjct: 20258 catattcatcattggagagagt 20237
>gb|AE017285.1| Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, complete genome Length = 3570858 Score = 42.1 bits (21), Expect = 4.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 278 gtggtggaaggggatgccgtg 298 ||||||||||||||||||||| Sbjct: 1607426 gtggtggaaggggatgccgtg 1607446
>gb|AC072041.21| Homo sapiens 3 BAC RP11-450A18 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 111809 Score = 42.1 bits (21), Expect = 4.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 404 agaaaatgcacagaagcactt 424 ||||||||||||||||||||| Sbjct: 105775 agaaaatgcacagaagcactt 105795
>emb|AJ248287.2|CNSPAX05 Pyrococcus abyssi complete genome; segment 5/6 Length = 305600 Score = 42.1 bits (21), Expect = 4.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 434 cagaaaaaattgacgcccttt 454 ||||||||||||||||||||| Sbjct: 66306 cagaaaaaattgacgcccttt 66326
>gb|AC160099.1| Unidentified bacterium clone zdt-45e5, complete sequence Length = 35743 Score = 42.1 bits (21), Expect = 4.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 452 tttggtaaagttgccaagtat 472 ||||||||||||||||||||| Sbjct: 196 tttggtaaagttgccaagtat 216
>gb|AC008062.3| Homo sapiens BAC clone RP11-68L6 from 2, complete sequence Length = 131250 Score = 42.1 bits (21), Expect = 4.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 757 atcagaaaggaaaaggctattatca 781 ||||| ||||||||||||||||||| Sbjct: 109762 atcagcaaggaaaaggctattatca 109786
>emb|BX294661.14| Zebrafish DNA sequence from clone CH211-199I18 in linkage group 20, complete sequence Length = 197237 Score = 42.1 bits (21), Expect = 4.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 979 cattaaacatgtacatatgga 999 ||||||||||||||||||||| Sbjct: 5092 cattaaacatgtacatatgga 5072 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 181,786,605 Number of extensions: 9598299 Number of successful extensions: 164403 Number of sequences better than 10.0: 15 Number of HSP's gapped: 164398 Number of HSP's successfully gapped: 27 Length of query: 1081 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1058 Effective length of database: 18,503,978,556 Effective search space: 19577209312248 Effective search space used: 19577209312248 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)
