ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf138l19
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1Q9P6S0:YJP1_SCHPO Uncharacterized threonine-rich protein C1742.0... 33 2.4
2Q5GH56:XKR7_RAT XK-related protein 7 - Rattus norvegicus (Rat) 33 2.4
3P22808:VND_DROME Homeobox protein vnd - Drosophila melanogaster ... 32 4.2
4Q9C615:SYP24_ARATH Putative syntaxin-24 - Arabidopsis thaliana (... 31 9.3

>Q9P6S0:YJP1_SCHPO Uncharacterized threonine-rich protein C1742.01 precursor -|
            Schizosaccharomyces pombe (Fission yeast)
          Length = 1563
 Score = 33.1 bits (74), Expect = 2.4
 Identities = 20/55 (36%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
 Frame = -1

Query: 647  PSTRTVSST*PAVSSCASATARYGASG--TFDPTRNGDHTETSRWPWYTTGSAVG 489
            P+T TVSST    SS  ++   Y  SG  T+   R  + + T  + +YTTG   G
Sbjct: 1473 PATETVSSTEAPESSTVTSNPIYQGSGTSTWSTVRQWNGSATYNYTYYTTGGFTG 1527



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>Q5GH56:XKR7_RAT XK-related protein 7 - Rattus norvegicus (Rat)|
          Length = 580

 Score = 33.1 bits (74), Expect = 2.4
 Identities = 16/36 (44%), Positives = 20/36 (55%)
 Frame = -3

Query: 732 SVDGEQSGAPDPEVVVPRDERPGLPPDPAVHPHREQ 625
           +V GE++G P P V      RPGLPP P   P R +
Sbjct: 488 AVGGERAGTPTPPVF---QVRPGLPPTPVARPLRTE 520



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>P22808:VND_DROME Homeobox protein vnd - Drosophila melanogaster (Fruit fly)|
          Length = 723

 Score = 32.3 bits (72), Expect = 4.2
 Identities = 14/30 (46%), Positives = 16/30 (53%)
 Frame = -1

Query: 1184 QQEGPRREDHHLPLLYQKQQHRNNAHAPTP 1095
            QQ+ P  + HH P L   QQH   A AP P
Sbjct: 295  QQQHPHHQQHHHPHLLLPQQHHQQAVAPLP 324



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>Q9C615:SYP24_ARATH Putative syntaxin-24 - Arabidopsis thaliana (Mouse-ear cress)|
          Length = 416

 Score = 31.2 bits (69), Expect = 9.3
 Identities = 20/70 (28%), Positives = 37/70 (52%), Gaps = 1/70 (1%)
 Frame = +1

Query: 313 RFYLNDLTVACLNATSNPASYLTVTLQATIAARNPNTRVGIYFDRTDAYAEYKGQQV-TV 489
           +F + D  +   +  SN  + L  +L   ++ RN  + +GI++DR +A   Y  Q++  V
Sbjct: 8   KFQVYDAELTHFDLESN--NNLQYSLSLNLSIRNSKSSIGIHYDRFEATVYYMNQRLGAV 65

Query: 490 PTALPVVYQG 519
           P  +P+ Y G
Sbjct: 66  P--MPLFYLG 73


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 157,427,715
Number of extensions: 2973735
Number of successful extensions: 7842
Number of sequences better than 10.0: 4
Number of HSP's gapped: 7820
Number of HSP's successfully gapped: 4
Length of query: 412
Length of database: 100,686,439
Length adjustment: 116
Effective length of query: 296
Effective length of database: 68,868,219
Effective search space: 20384992824
Effective search space used: 20384992824
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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