| Clone Name | FLbaf138l19 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY108991.1| Zea mays PCO060303 mRNA sequence Length = 487 Score = 151 bits (76), Expect = 7e-33 Identities = 141/162 (87%), Gaps = 3/162 (1%) Strand = Plus / Plus Query: 172 atgtcgatcaagcactgtgacaagcac---gactgcgagcggcggcggctgtaccgccag 228 |||||||||||| |||| ||| ||||| ||||||||||||| ||| |||||||| | Sbjct: 177 atgtcgatcaagtactgcgaccagcacaaggactgcgagcggcagcgtctgtaccgtcgc 236 Query: 229 ttctgcgccgccctggtggccatcatcctgctcatcctcctcatcatcctcatcgtctgg 288 ||||||||||||||||||| | ||||| ||||| ||||||||||| | |||||||||||| Sbjct: 237 ttctgcgccgccctggtgggcgtcatcgtgctcgtcctcctcatcgtgctcatcgtctgg 296 Query: 289 ctcgtgctccgccccaccaggccgcgcttctacctcaacgac 330 ||||| ||||||||||||| ||| ||||||| |||||||||| Sbjct: 297 ctcgtcctccgccccaccaagcctcgcttcttcctcaacgac 338 Score = 54.0 bits (27), Expect = 0.001 Identities = 81/99 (81%) Strand = Plus / Plus Query: 370 tcctacctcaccgtgacgctgcaggcgacgattgccgcccgcaaccccaacacccgcgtc 429 |||||||||||||| || ||||||| ||| | || | |||||| ||||| ||||||| Sbjct: 372 tcctacctcaccgtcaccatgcaggccacgctggcgtcgcgcaacaccaacgaccgcgtc 431 Query: 430 ggcatctacttcgaccggacggacgcctacgccgagtac 468 |||||||||| |||||| | |||| |||||||||||| Sbjct: 432 ggcatctactacgaccgcgccgacgtgtacgccgagtac 470
>ref|NM_001067302.1| Oryza sativa (japonica cultivar-group) Os08g0102700 (Os08g0102700) mRNA, complete cds Length = 1519 Score = 143 bits (72), Expect = 2e-30 Identities = 185/222 (83%), Gaps = 3/222 (1%) Strand = Plus / Plus Query: 601 caggacgagacggccggctacgtgctgctcacggtgcgggtggacggctggatcaggtgg 660 ||||||||||| ||||||||| |||| |||| | || || |||||||||||| | | Sbjct: 810 caggacgagaccgccggctacctgctcgtcaccatccgcgtcgacggctggatccgctac 869 Query: 661 aaggccggggcgttcatcacggggcactaccacctccgggtcaggtgccccgctctgctc 720 |||||||| || |||||||| || |||||||||||||| |||||||||||||| |||||| Sbjct: 870 aaggccggcgccttcatcaccggacactaccacctccgcgtcaggtgccccgccctgctc 929 Query: 721 accgtcaacggagggcagggcagctacggctccatcgccggcggcggcgggaacggctac 780 | |||||||| || | ||| ||||||||||||| | ||||||||||| ||||||||| Sbjct: 930 atcgtcaacgacggccggggaagctacggctccaactccggcggcggc---aacggctac 986 Query: 781 ttcaacttccagcgcgccgcgccgtgcgttgtcgacgtctga 822 |||| |||||||| ||||| | ||||| |||||||||||| Sbjct: 987 ttcaggttccagcgagccgccgcctgcgtcgtcgacgtctga 1028 Score = 111 bits (56), Expect = 6e-21 Identities = 71/76 (93%) Strand = Plus / Plus Query: 263 tcctcctcatcatcctcatcgtctggctcgtgctccgccccaccaggccgcgcttctacc 322 ||||||||||| ||||||||||||||||| | ||||||||||||| ||| |||||||||| Sbjct: 439 tcctcctcatcgtcctcatcgtctggctcatcctccgccccaccaagcctcgcttctacc 498 Query: 323 tcaacgacctcaccgt 338 |||||||||||||||| Sbjct: 499 tcaacgacctcaccgt 514 Score = 46.1 bits (23), Expect = 0.30 Identities = 59/71 (83%) Strand = Plus / Plus Query: 403 gccgcccgcaaccccaacacccgcgtcggcatctacttcgaccggacggacgcctacgcc 462 |||||||||||| |||| ||||| |||||||||| |||||| | |||| |||||| Sbjct: 612 gccgcccgcaacggcaacgagcgcgtgggcatctactacgaccgcgccgacgtgtacgcc 671 Query: 463 gagtacaaggg 473 ||||||||||| Sbjct: 672 gagtacaaggg 682
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8 Length = 28434780 Score = 143 bits (72), Expect = 2e-30 Identities = 185/222 (83%), Gaps = 3/222 (1%) Strand = Plus / Minus Query: 601 caggacgagacggccggctacgtgctgctcacggtgcgggtggacggctggatcaggtgg 660 ||||||||||| ||||||||| |||| |||| | || || |||||||||||| | | Sbjct: 146296 caggacgagaccgccggctacctgctcgtcaccatccgcgtcgacggctggatccgctac 146237 Query: 661 aaggccggggcgttcatcacggggcactaccacctccgggtcaggtgccccgctctgctc 720 |||||||| || |||||||| || |||||||||||||| |||||||||||||| |||||| Sbjct: 146236 aaggccggcgccttcatcaccggacactaccacctccgcgtcaggtgccccgccctgctc 146177 Query: 721 accgtcaacggagggcagggcagctacggctccatcgccggcggcggcgggaacggctac 780 | |||||||| || | ||| ||||||||||||| | ||||||||||| ||||||||| Sbjct: 146176 atcgtcaacgacggccggggaagctacggctccaactccggcggcggc---aacggctac 146120 Query: 781 ttcaacttccagcgcgccgcgccgtgcgttgtcgacgtctga 822 |||| |||||||| ||||| | ||||| |||||||||||| Sbjct: 146119 ttcaggttccagcgagccgccgcctgcgtcgtcgacgtctga 146078 Score = 111 bits (56), Expect = 6e-21 Identities = 71/76 (93%) Strand = Plus / Minus Query: 263 tcctcctcatcatcctcatcgtctggctcgtgctccgccccaccaggccgcgcttctacc 322 ||||||||||| ||||||||||||||||| | ||||||||||||| ||| |||||||||| Sbjct: 146667 tcctcctcatcgtcctcatcgtctggctcatcctccgccccaccaagcctcgcttctacc 146608 Query: 323 tcaacgacctcaccgt 338 |||||||||||||||| Sbjct: 146607 tcaacgacctcaccgt 146592 Score = 46.1 bits (23), Expect = 0.30 Identities = 59/71 (83%) Strand = Plus / Minus Query: 403 gccgcccgcaaccccaacacccgcgtcggcatctacttcgaccggacggacgcctacgcc 462 |||||||||||| |||| ||||| |||||||||| |||||| | |||| |||||| Sbjct: 146494 gccgcccgcaacggcaacgagcgcgtgggcatctactacgaccgcgccgacgtgtacgcc 146435 Query: 463 gagtacaaggg 473 ||||||||||| Sbjct: 146434 gagtacaaggg 146424 Score = 42.1 bits (21), Expect = 4.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 257 tgctcatcctcctcatcatcctcatcgtc 285 ||||| ||||||||||| ||||||||||| Sbjct: 947683 tgctcctcctcctcatcctcctcatcgtc 947655
>dbj|AP004654.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0015C07 Length = 149079 Score = 143 bits (72), Expect = 2e-30 Identities = 185/222 (83%), Gaps = 3/222 (1%) Strand = Plus / Minus Query: 601 caggacgagacggccggctacgtgctgctcacggtgcgggtggacggctggatcaggtgg 660 ||||||||||| ||||||||| |||| |||| | || || |||||||||||| | | Sbjct: 61631 caggacgagaccgccggctacctgctcgtcaccatccgcgtcgacggctggatccgctac 61572 Query: 661 aaggccggggcgttcatcacggggcactaccacctccgggtcaggtgccccgctctgctc 720 |||||||| || |||||||| || |||||||||||||| |||||||||||||| |||||| Sbjct: 61571 aaggccggcgccttcatcaccggacactaccacctccgcgtcaggtgccccgccctgctc 61512 Query: 721 accgtcaacggagggcagggcagctacggctccatcgccggcggcggcgggaacggctac 780 | |||||||| || | ||| ||||||||||||| | ||||||||||| ||||||||| Sbjct: 61511 atcgtcaacgacggccggggaagctacggctccaactccggcggcggc---aacggctac 61455 Query: 781 ttcaacttccagcgcgccgcgccgtgcgttgtcgacgtctga 822 |||| |||||||| ||||| | ||||| |||||||||||| Sbjct: 61454 ttcaggttccagcgagccgccgcctgcgtcgtcgacgtctga 61413 Score = 111 bits (56), Expect = 6e-21 Identities = 71/76 (93%) Strand = Plus / Minus Query: 263 tcctcctcatcatcctcatcgtctggctcgtgctccgccccaccaggccgcgcttctacc 322 ||||||||||| ||||||||||||||||| | ||||||||||||| ||| |||||||||| Sbjct: 62002 tcctcctcatcgtcctcatcgtctggctcatcctccgccccaccaagcctcgcttctacc 61943 Query: 323 tcaacgacctcaccgt 338 |||||||||||||||| Sbjct: 61942 tcaacgacctcaccgt 61927 Score = 46.1 bits (23), Expect = 0.30 Identities = 59/71 (83%) Strand = Plus / Minus Query: 403 gccgcccgcaaccccaacacccgcgtcggcatctacttcgaccggacggacgcctacgcc 462 |||||||||||| |||| ||||| |||||||||| |||||| | |||| |||||| Sbjct: 61829 gccgcccgcaacggcaacgagcgcgtgggcatctactacgaccgcgccgacgtgtacgcc 61770 Query: 463 gagtacaaggg 473 ||||||||||| Sbjct: 61769 gagtacaaggg 61759
>dbj|AK104488.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-302-B05, full insert sequence Length = 1219 Score = 143 bits (72), Expect = 2e-30 Identities = 185/222 (83%), Gaps = 3/222 (1%) Strand = Plus / Plus Query: 601 caggacgagacggccggctacgtgctgctcacggtgcgggtggacggctggatcaggtgg 660 ||||||||||| ||||||||| |||| |||| | || || |||||||||||| | | Sbjct: 565 caggacgagaccgccggctacctgctcgtcaccatccgcgtcgacggctggatccgctac 624 Query: 661 aaggccggggcgttcatcacggggcactaccacctccgggtcaggtgccccgctctgctc 720 |||||||| || |||||||| || |||||||||||||| |||||||||||||| |||||| Sbjct: 625 aaggccggcgccttcatcaccggacactaccacctccgcgtcaggtgccccgccctgctc 684 Query: 721 accgtcaacggagggcagggcagctacggctccatcgccggcggcggcgggaacggctac 780 | |||||||| || | ||| ||||||||||||| | ||||||||||| ||||||||| Sbjct: 685 atcgtcaacgacggccggggaagctacggctccaactccggcggcggc---aacggctac 741 Query: 781 ttcaacttccagcgcgccgcgccgtgcgttgtcgacgtctga 822 |||| |||||||| ||||| | ||||| |||||||||||| Sbjct: 742 ttcaggttccagcgagccgccgcctgcgtcgtcgacgtctga 783 Score = 111 bits (56), Expect = 6e-21 Identities = 71/76 (93%) Strand = Plus / Plus Query: 263 tcctcctcatcatcctcatcgtctggctcgtgctccgccccaccaggccgcgcttctacc 322 ||||||||||| ||||||||||||||||| | ||||||||||||| ||| |||||||||| Sbjct: 194 tcctcctcatcgtcctcatcgtctggctcatcctccgccccaccaagcctcgcttctacc 253 Query: 323 tcaacgacctcaccgt 338 |||||||||||||||| Sbjct: 254 tcaacgacctcaccgt 269 Score = 46.1 bits (23), Expect = 0.30 Identities = 59/71 (83%) Strand = Plus / Plus Query: 403 gccgcccgcaaccccaacacccgcgtcggcatctacttcgaccggacggacgcctacgcc 462 |||||||||||| |||| ||||| |||||||||| |||||| | |||| |||||| Sbjct: 367 gccgcccgcaacggcaacgagcgcgtgggcatctactacgaccgcgccgacgtgtacgcc 426 Query: 463 gagtacaaggg 473 ||||||||||| Sbjct: 427 gagtacaaggg 437
>dbj|AK099239.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013116B02, full insert sequence Length = 1386 Score = 143 bits (72), Expect = 2e-30 Identities = 185/222 (83%), Gaps = 3/222 (1%) Strand = Plus / Plus Query: 601 caggacgagacggccggctacgtgctgctcacggtgcgggtggacggctggatcaggtgg 660 ||||||||||| ||||||||| |||| |||| | || || |||||||||||| | | Sbjct: 733 caggacgagaccgccggctacctgctcgtcaccatccgcgtcgacggctggatccgctac 792 Query: 661 aaggccggggcgttcatcacggggcactaccacctccgggtcaggtgccccgctctgctc 720 |||||||| || |||||||| || |||||||||||||| |||||||||||||| |||||| Sbjct: 793 aaggccggcgccttcatcaccggacactaccacctccgcgtcaggtgccccgccctgctc 852 Query: 721 accgtcaacggagggcagggcagctacggctccatcgccggcggcggcgggaacggctac 780 | |||||||| || | ||| ||||||||||||| | ||||||||||| ||||||||| Sbjct: 853 atcgtcaacgacggccggggaagctacggctccaactccggcggcggc---aacggctac 909 Query: 781 ttcaacttccagcgcgccgcgccgtgcgttgtcgacgtctga 822 |||| |||||||| ||||| | ||||| |||||||||||| Sbjct: 910 ttcaggttccagcgagccgccgcctgcgtcgtcgacgtctga 951 Score = 111 bits (56), Expect = 6e-21 Identities = 71/76 (93%) Strand = Plus / Plus Query: 263 tcctcctcatcatcctcatcgtctggctcgtgctccgccccaccaggccgcgcttctacc 322 ||||||||||| ||||||||||||||||| | ||||||||||||| ||| |||||||||| Sbjct: 362 tcctcctcatcgtcctcatcgtctggctcatcctccgccccaccaagcctcgcttctacc 421 Query: 323 tcaacgacctcaccgt 338 |||||||||||||||| Sbjct: 422 tcaacgacctcaccgt 437 Score = 46.1 bits (23), Expect = 0.30 Identities = 59/71 (83%) Strand = Plus / Plus Query: 403 gccgcccgcaaccccaacacccgcgtcggcatctacttcgaccggacggacgcctacgcc 462 |||||||||||| |||| ||||| |||||||||| |||||| | |||| |||||| Sbjct: 535 gccgcccgcaacggcaacgagcgcgtgggcatctactacgaccgcgccgacgtgtacgcc 594 Query: 463 gagtacaaggg 473 ||||||||||| Sbjct: 595 gagtacaaggg 605
>dbj|AK072003.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013097H23, full insert sequence Length = 1445 Score = 143 bits (72), Expect = 2e-30 Identities = 185/222 (83%), Gaps = 3/222 (1%) Strand = Plus / Plus Query: 601 caggacgagacggccggctacgtgctgctcacggtgcgggtggacggctggatcaggtgg 660 ||||||||||| ||||||||| |||| |||| | || || |||||||||||| | | Sbjct: 710 caggacgagaccgccggctacctgctcgtcaccatccgcgtcgacggctggatccgctac 769 Query: 661 aaggccggggcgttcatcacggggcactaccacctccgggtcaggtgccccgctctgctc 720 |||||||| || |||||||| || |||||||||||||| |||||||||||||| |||||| Sbjct: 770 aaggccggcgccttcatcaccggacactaccacctccgcgtcaggtgccccgccctgctc 829 Query: 721 accgtcaacggagggcagggcagctacggctccatcgccggcggcggcgggaacggctac 780 | |||||||| || | ||| ||||||||||||| | ||||||||||| ||||||||| Sbjct: 830 atcgtcaacgacggccggggaagctacggctccaactccggcggcggc---aacggctac 886 Query: 781 ttcaacttccagcgcgccgcgccgtgcgttgtcgacgtctga 822 |||| |||||||| ||||| | ||||| |||||||||||| Sbjct: 887 ttcaggttccagcgagccgccgcctgcgtcgtcgacgtctga 928 Score = 111 bits (56), Expect = 6e-21 Identities = 71/76 (93%) Strand = Plus / Plus Query: 263 tcctcctcatcatcctcatcgtctggctcgtgctccgccccaccaggccgcgcttctacc 322 ||||||||||| ||||||||||||||||| | ||||||||||||| ||| |||||||||| Sbjct: 339 tcctcctcatcgtcctcatcgtctggctcatcctccgccccaccaagcctcgcttctacc 398 Query: 323 tcaacgacctcaccgt 338 |||||||||||||||| Sbjct: 399 tcaacgacctcaccgt 414 Score = 46.1 bits (23), Expect = 0.30 Identities = 59/71 (83%) Strand = Plus / Plus Query: 403 gccgcccgcaaccccaacacccgcgtcggcatctacttcgaccggacggacgcctacgcc 462 |||||||||||| |||| ||||| |||||||||| |||||| | |||| |||||| Sbjct: 512 gccgcccgcaacggcaacgagcgcgtgggcatctactacgaccgcgccgacgtgtacgcc 571 Query: 463 gagtacaaggg 473 ||||||||||| Sbjct: 572 gagtacaaggg 582
>dbj|AK067526.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013109O20, full insert sequence Length = 1520 Score = 143 bits (72), Expect = 2e-30 Identities = 185/222 (83%), Gaps = 3/222 (1%) Strand = Plus / Plus Query: 601 caggacgagacggccggctacgtgctgctcacggtgcgggtggacggctggatcaggtgg 660 ||||||||||| ||||||||| |||| |||| | || || |||||||||||| | | Sbjct: 811 caggacgagaccgccggctacctgctcgtcaccatccgcgtcgacggctggatccgctac 870 Query: 661 aaggccggggcgttcatcacggggcactaccacctccgggtcaggtgccccgctctgctc 720 |||||||| || |||||||| || |||||||||||||| |||||||||||||| |||||| Sbjct: 871 aaggccggcgccttcatcaccggacactaccacctccgcgtcaggtgccccgccctgctc 930 Query: 721 accgtcaacggagggcagggcagctacggctccatcgccggcggcggcgggaacggctac 780 | |||||||| || | ||| ||||||||||||| | ||||||||||| ||||||||| Sbjct: 931 atcgtcaacgacggccggggaagctacggctccaactccggcggcggc---aacggctac 987 Query: 781 ttcaacttccagcgcgccgcgccgtgcgttgtcgacgtctga 822 |||| |||||||| ||||| | ||||| |||||||||||| Sbjct: 988 ttcaggttccagcgagccgccgcctgcgtcgtcgacgtctga 1029 Score = 111 bits (56), Expect = 6e-21 Identities = 71/76 (93%) Strand = Plus / Plus Query: 263 tcctcctcatcatcctcatcgtctggctcgtgctccgccccaccaggccgcgcttctacc 322 ||||||||||| ||||||||||||||||| | ||||||||||||| ||| |||||||||| Sbjct: 440 tcctcctcatcgtcctcatcgtctggctcatcctccgccccaccaagcctcgcttctacc 499 Query: 323 tcaacgacctcaccgt 338 |||||||||||||||| Sbjct: 500 tcaacgacctcaccgt 515 Score = 46.1 bits (23), Expect = 0.30 Identities = 59/71 (83%) Strand = Plus / Plus Query: 403 gccgcccgcaaccccaacacccgcgtcggcatctacttcgaccggacggacgcctacgcc 462 |||||||||||| |||| ||||| |||||||||| |||||| | |||| |||||| Sbjct: 613 gccgcccgcaacggcaacgagcgcgtgggcatctactacgaccgcgccgacgtgtacgcc 672 Query: 463 gagtacaaggg 473 ||||||||||| Sbjct: 673 gagtacaaggg 683
>dbj|AK061780.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-039-D12, full insert sequence Length = 1323 Score = 143 bits (72), Expect = 2e-30 Identities = 185/222 (83%), Gaps = 3/222 (1%) Strand = Plus / Plus Query: 601 caggacgagacggccggctacgtgctgctcacggtgcgggtggacggctggatcaggtgg 660 ||||||||||| ||||||||| |||| |||| | || || |||||||||||| | | Sbjct: 588 caggacgagaccgccggctacctgctcgtcaccatccgcgtcgacggctggatccgctac 647 Query: 661 aaggccggggcgttcatcacggggcactaccacctccgggtcaggtgccccgctctgctc 720 |||||||| || |||||||| || |||||||||||||| |||||||||||||| |||||| Sbjct: 648 aaggccggcgccttcatcaccggacactaccacctccgcgtcaggtgccccgccctgctc 707 Query: 721 accgtcaacggagggcagggcagctacggctccatcgccggcggcggcgggaacggctac 780 | |||||||| || | ||| ||||||||||||| | ||||||||||| ||||||||| Sbjct: 708 atcgtcaacgacggccggggaagctacggctccaactccggcggcggc---aacggctac 764 Query: 781 ttcaacttccagcgcgccgcgccgtgcgttgtcgacgtctga 822 |||| |||||||| ||||| | ||||| |||||||||||| Sbjct: 765 ttcaggttccagcgagccgccgcctgcgtcgtcgacgtctga 806 Score = 111 bits (56), Expect = 6e-21 Identities = 71/76 (93%) Strand = Plus / Plus Query: 263 tcctcctcatcatcctcatcgtctggctcgtgctccgccccaccaggccgcgcttctacc 322 ||||||||||| ||||||||||||||||| | ||||||||||||| ||| |||||||||| Sbjct: 217 tcctcctcatcgtcctcatcgtctggctcatcctccgccccaccaagcctcgcttctacc 276 Query: 323 tcaacgacctcaccgt 338 |||||||||||||||| Sbjct: 277 tcaacgacctcaccgt 292 Score = 46.1 bits (23), Expect = 0.30 Identities = 59/71 (83%) Strand = Plus / Plus Query: 403 gccgcccgcaaccccaacacccgcgtcggcatctacttcgaccggacggacgcctacgcc 462 |||||||||||| |||| ||||| |||||||||| |||||| | |||| |||||| Sbjct: 390 gccgcccgcaacggcaacgagcgcgtgggcatctactacgaccgcgccgacgtgtacgcc 449 Query: 463 gagtacaaggg 473 ||||||||||| Sbjct: 450 gagtacaaggg 460
>dbj|AK061546.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-311-A05, full insert sequence Length = 1211 Score = 143 bits (72), Expect = 2e-30 Identities = 185/222 (83%), Gaps = 3/222 (1%) Strand = Plus / Plus Query: 601 caggacgagacggccggctacgtgctgctcacggtgcgggtggacggctggatcaggtgg 660 ||||||||||| ||||||||| |||| |||| | || || |||||||||||| | | Sbjct: 476 caggacgagaccgccggctacctgctcgtcaccatccgcgtcgacggctggatccgctac 535 Query: 661 aaggccggggcgttcatcacggggcactaccacctccgggtcaggtgccccgctctgctc 720 |||||||| || |||||||| || |||||||||||||| |||||||||||||| |||||| Sbjct: 536 aaggccggcgccttcatcaccggacactaccacctccgcgtcaggtgccccgccctgctc 595 Query: 721 accgtcaacggagggcagggcagctacggctccatcgccggcggcggcgggaacggctac 780 | |||||||| || | ||| ||||||||||||| | ||||||||||| ||||||||| Sbjct: 596 atcgtcaacgacggccggggaagctacggctccaactccggcggcggc---aacggctac 652 Query: 781 ttcaacttccagcgcgccgcgccgtgcgttgtcgacgtctga 822 |||| |||||||| ||||| | ||||| |||||||||||| Sbjct: 653 ttcaggttccagcgagccgccgcctgcgtcgtcgacgtctga 694 Score = 111 bits (56), Expect = 6e-21 Identities = 71/76 (93%) Strand = Plus / Plus Query: 263 tcctcctcatcatcctcatcgtctggctcgtgctccgccccaccaggccgcgcttctacc 322 ||||||||||| ||||||||||||||||| | ||||||||||||| ||| |||||||||| Sbjct: 105 tcctcctcatcgtcctcatcgtctggctcatcctccgccccaccaagcctcgcttctacc 164 Query: 323 tcaacgacctcaccgt 338 |||||||||||||||| Sbjct: 165 tcaacgacctcaccgt 180 Score = 46.1 bits (23), Expect = 0.30 Identities = 59/71 (83%) Strand = Plus / Plus Query: 403 gccgcccgcaaccccaacacccgcgtcggcatctacttcgaccggacggacgcctacgcc 462 |||||||||||| |||| ||||| |||||||||| |||||| | |||| |||||| Sbjct: 278 gccgcccgcaacggcaacgagcgcgtgggcatctactacgaccgcgccgacgtgtacgcc 337 Query: 463 gagtacaaggg 473 ||||||||||| Sbjct: 338 gagtacaaggg 348
>dbj|AK061430.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-306-H04, full insert sequence Length = 1046 Score = 143 bits (72), Expect = 2e-30 Identities = 185/222 (83%), Gaps = 3/222 (1%) Strand = Plus / Plus Query: 601 caggacgagacggccggctacgtgctgctcacggtgcgggtggacggctggatcaggtgg 660 ||||||||||| ||||||||| |||| |||| | || || |||||||||||| | | Sbjct: 569 caggacgagaccgccggctacctgctcgtcaccatccgcgtcgacggctggatccgctac 628 Query: 661 aaggccggggcgttcatcacggggcactaccacctccgggtcaggtgccccgctctgctc 720 |||||||| || |||||||| || |||||||||||||| |||||||||||||| |||||| Sbjct: 629 aaggccggcgccttcatcaccggacactaccacctccgcgtcaggtgccccgccctgctc 688 Query: 721 accgtcaacggagggcagggcagctacggctccatcgccggcggcggcgggaacggctac 780 | |||||||| || | ||| ||||||||||||| | ||||||||||| ||||||||| Sbjct: 689 atcgtcaacgacggccggggaagctacggctccaactccggcggcggc---aacggctac 745 Query: 781 ttcaacttccagcgcgccgcgccgtgcgttgtcgacgtctga 822 |||| |||||||| ||||| | ||||| |||||||||||| Sbjct: 746 ttcaggttccagcgagccgccgcctgcgtcgtcgacgtctga 787 Score = 111 bits (56), Expect = 6e-21 Identities = 71/76 (93%) Strand = Plus / Plus Query: 263 tcctcctcatcatcctcatcgtctggctcgtgctccgccccaccaggccgcgcttctacc 322 ||||||||||| ||||||||||||||||| | ||||||||||||| ||| |||||||||| Sbjct: 198 tcctcctcatcgtcctcatcgtctggctcatcctccgccccaccaagcctcgcttctacc 257 Query: 323 tcaacgacctcaccgt 338 |||||||||||||||| Sbjct: 258 tcaacgacctcaccgt 273 Score = 46.1 bits (23), Expect = 0.30 Identities = 59/71 (83%) Strand = Plus / Plus Query: 403 gccgcccgcaaccccaacacccgcgtcggcatctacttcgaccggacggacgcctacgcc 462 |||||||||||| |||| ||||| |||||||||| |||||| | |||| |||||| Sbjct: 371 gccgcccgcaacggcaacgagcgcgtgggcatctactacgaccgcgccgacgtgtacgcc 430 Query: 463 gagtacaaggg 473 ||||||||||| Sbjct: 431 gagtacaaggg 441
>emb|CT832191.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSA015D16, full insert sequence Length = 752 Score = 111 bits (56), Expect = 6e-21 Identities = 71/76 (93%) Strand = Plus / Plus Query: 263 tcctcctcatcatcctcatcgtctggctcgtgctccgccccaccaggccgcgcttctacc 322 ||||||||||| ||||||||||||||||| | ||||||||||||| ||| |||||||||| Sbjct: 377 tcctcctcatcgtcctcatcgtctggctcatcctccgccccaccaagcctcgcttctacc 436 Query: 323 tcaacgacctcaccgt 338 |||||||||||||||| Sbjct: 437 tcaacgacctcaccgt 452 Score = 46.1 bits (23), Expect = 0.30 Identities = 59/71 (83%) Strand = Plus / Plus Query: 403 gccgcccgcaaccccaacacccgcgtcggcatctacttcgaccggacggacgcctacgcc 462 |||||||||||| |||| ||||| |||||||||| |||||| | |||| |||||| Sbjct: 550 gccgcccgcaacggcaacgagcgcgtgggcatctactacgaccgcgccgacgtgtacgcc 609 Query: 463 gagtacaaggg 473 ||||||||||| Sbjct: 610 gagtacaaggg 620
>emb|CT832190.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSA015C15, full insert sequence Length = 752 Score = 111 bits (56), Expect = 6e-21 Identities = 71/76 (93%) Strand = Plus / Plus Query: 263 tcctcctcatcatcctcatcgtctggctcgtgctccgccccaccaggccgcgcttctacc 322 ||||||||||| ||||||||||||||||| | ||||||||||||| ||| |||||||||| Sbjct: 379 tcctcctcatcgtcctcatcgtctggctcatcctccgccccaccaagcctcgcttctacc 438 Query: 323 tcaacgacctcaccgt 338 |||||||||||||||| Sbjct: 439 tcaacgacctcaccgt 454 Score = 46.1 bits (23), Expect = 0.30 Identities = 59/71 (83%) Strand = Plus / Plus Query: 403 gccgcccgcaaccccaacacccgcgtcggcatctacttcgaccggacggacgcctacgcc 462 |||||||||||| |||| ||||| |||||||||| |||||| | |||| |||||| Sbjct: 552 gccgcccgcaacggcaacgagcgcgtgggcatctactacgaccgcgccgacgtgtacgcc 611 Query: 463 gagtacaaggg 473 ||||||||||| Sbjct: 612 gagtacaaggg 622
>emb|CT832189.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSA012A20, full insert sequence Length = 690 Score = 111 bits (56), Expect = 6e-21 Identities = 71/76 (93%) Strand = Plus / Plus Query: 263 tcctcctcatcatcctcatcgtctggctcgtgctccgccccaccaggccgcgcttctacc 322 ||||||||||| ||||||||||||||||| | ||||||||||||| ||| |||||||||| Sbjct: 315 tcctcctcatcgtcctcatcgtctggctcatcctccgccccaccaagcctcgcttctacc 374 Query: 323 tcaacgacctcaccgt 338 |||||||||||||||| Sbjct: 375 tcaacgacctcaccgt 390 Score = 46.1 bits (23), Expect = 0.30 Identities = 59/71 (83%) Strand = Plus / Plus Query: 403 gccgcccgcaaccccaacacccgcgtcggcatctacttcgaccggacggacgcctacgcc 462 |||||||||||| |||| ||||| |||||||||| |||||| | |||| |||||| Sbjct: 488 gccgcccgcaacggcaacgagcgcgtgggcatctactacgaccgcgccgacgtgtacgcc 547 Query: 463 gagtacaaggg 473 ||||||||||| Sbjct: 548 gagtacaaggg 558
>gb|DQ244587.1| Zea mays clone 9443 mRNA sequence Length = 1000 Score = 69.9 bits (35), Expect = 2e-08 Identities = 38/39 (97%) Strand = Plus / Plus Query: 589 gtggcgctggcgcaggacgagacggccggctacgtgctg 627 ||||||||||||||||||||||||||||| ||||||||| Sbjct: 588 gtggcgctggcgcaggacgagacggccgggtacgtgctg 626 Score = 60.0 bits (30), Expect = 2e-05 Identities = 94/114 (82%), Gaps = 1/114 (0%) Strand = Plus / Plus Query: 211 cggcggctgtaccgccagttctgcgccgccctggtggccatcatcctgctcatcctcctc 270 |||||||| |||||| ||| ||||| ||| ||| | ||| || |||| ||| |||| || Sbjct: 206 cggcggctctaccgcaagtgctgcggcgcgctgctcgccctcgtcctcctcgccctcttc 265 Query: 271 atcatcctcatcgtctggctcgtgctccgccccac-caggccgcgcttctacct 323 |||||||||||||||| || |||||||||||| | || ||| ||||||||||| Sbjct: 266 atcatcctcatcgtctacctggtgctccgccccccacaagccccgcttctacct 319
>gb|DQ244147.1| Zea mays clone 2533 mRNA sequence Length = 999 Score = 69.9 bits (35), Expect = 2e-08 Identities = 38/39 (97%) Strand = Plus / Plus Query: 589 gtggcgctggcgcaggacgagacggccggctacgtgctg 627 ||||||||||||||||||||||||||||| ||||||||| Sbjct: 587 gtggcgctggcgcaggacgagacggccgggtacgtgctg 625 Score = 65.9 bits (33), Expect = 3e-07 Identities = 93/113 (82%) Strand = Plus / Plus Query: 211 cggcggctgtaccgccagttctgcgccgccctggtggccatcatcctgctcatcctcctc 270 |||||||| |||||| ||| ||||| ||| ||| | ||| || |||| ||| |||| || Sbjct: 206 cggcggctctaccgcaagtgctgcggcgcgctgctcgccctcgtcctcctcgccctcttc 265 Query: 271 atcatcctcatcgtctggctcgtgctccgccccaccaggccgcgcttctacct 323 |||||||||||||||| || |||||||||||| || ||| ||||||||||| Sbjct: 266 atcatcctcatcgtctacctggtgctccgcccccacaagccccgcttctacct 318
>emb|CT830665.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA110G18, full insert sequence Length = 1466 Score = 60.0 bits (30), Expect = 2e-05 Identities = 57/66 (86%) Strand = Plus / Plus Query: 685 cactaccacctccgggtcaggtgccccgctctgctcaccgtcaacggagggcagggcagc 744 |||||||||||||| |||| |||||||| || ||||||||||||| || |||||||| Sbjct: 987 cactaccacctccgcgtcaactgccccgccctcctcaccgtcaacgacggcaagggcagc 1046 Query: 745 tacggc 750 |||||| Sbjct: 1047 tacggc 1052 Score = 42.1 bits (21), Expect = 4.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 498 gctccccgtggtgtaccagggccac 522 ||||||||||| ||||||||||||| Sbjct: 797 gctccccgtggagtaccagggccac 821
>ref|NM_001060853.1| Oryza sativa (japonica cultivar-group) Os04g0685400 (Os04g0685400) mRNA, complete cds Length = 1419 Score = 60.0 bits (30), Expect = 2e-05 Identities = 57/66 (86%) Strand = Plus / Plus Query: 685 cactaccacctccgggtcaggtgccccgctctgctcaccgtcaacggagggcagggcagc 744 |||||||||||||| |||| |||||||| || ||||||||||||| || |||||||| Sbjct: 941 cactaccacctccgcgtcaactgccccgccctcctcaccgtcaacgacggcaagggcagc 1000 Query: 745 tacggc 750 |||||| Sbjct: 1001 tacggc 1006 Score = 42.1 bits (21), Expect = 4.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 498 gctccccgtggtgtaccagggccac 522 ||||||||||| ||||||||||||| Sbjct: 751 gctccccgtggagtaccagggccac 775
>emb|AL732347.3| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0723C07, complete sequence Length = 112897 Score = 60.0 bits (30), Expect = 2e-05 Identities = 57/66 (86%) Strand = Plus / Minus Query: 685 cactaccacctccgggtcaggtgccccgctctgctcaccgtcaacggagggcagggcagc 744 |||||||||||||| |||| |||||||| || ||||||||||||| || |||||||| Sbjct: 1290 cactaccacctccgcgtcaactgccccgccctcctcaccgtcaacgacggcaagggcagc 1231 Query: 745 tacggc 750 |||||| Sbjct: 1230 tacggc 1225 Score = 42.1 bits (21), Expect = 4.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 498 gctccccgtggtgtaccagggccac 522 ||||||||||| ||||||||||||| Sbjct: 1480 gctccccgtggagtaccagggccac 1456
>emb|AL732343.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0913C04, complete sequence Length = 94152 Score = 60.0 bits (30), Expect = 2e-05 Identities = 57/66 (86%) Strand = Plus / Minus Query: 685 cactaccacctccgggtcaggtgccccgctctgctcaccgtcaacggagggcagggcagc 744 |||||||||||||| |||| |||||||| || ||||||||||||| || |||||||| Sbjct: 78290 cactaccacctccgcgtcaactgccccgccctcctcaccgtcaacgacggcaagggcagc 78231 Query: 745 tacggc 750 |||||| Sbjct: 78230 tacggc 78225 Score = 42.1 bits (21), Expect = 4.7 Identities = 33/37 (89%) Strand = Plus / Minus Query: 408 ccgcaaccccaacacccgcgtcggcatctacttcgac 444 |||||||||||||| ||||||||| |||||| |||| Sbjct: 68625 ccgcaaccccaacaagcgcgtcggcctctactacgac 68589 Score = 42.1 bits (21), Expect = 4.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 498 gctccccgtggtgtaccagggccac 522 ||||||||||| ||||||||||||| Sbjct: 78480 gctccccgtggagtaccagggccac 78456
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 60.0 bits (30), Expect = 2e-05 Identities = 57/66 (86%) Strand = Plus / Minus Query: 685 cactaccacctccgggtcaggtgccccgctctgctcaccgtcaacggagggcagggcagc 744 |||||||||||||| |||| |||||||| || ||||||||||||| || |||||||| Sbjct: 35046622 cactaccacctccgcgtcaactgccccgccctcctcaccgtcaacgacggcaagggcagc 35046563 Query: 745 tacggc 750 |||||| Sbjct: 35046562 tacggc 35046557 Score = 42.1 bits (21), Expect = 4.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 165 gaagaagatgtcgatcaagca 185 ||||||||||||||||||||| Sbjct: 10409370 gaagaagatgtcgatcaagca 10409390 Score = 42.1 bits (21), Expect = 4.7 Identities = 33/37 (89%) Strand = Plus / Minus Query: 408 ccgcaaccccaacacccgcgtcggcatctacttcgac 444 |||||||||||||| ||||||||| |||||| |||| Sbjct: 35036907 ccgcaaccccaacaagcgcgtcggcctctactacgac 35036871 Score = 42.1 bits (21), Expect = 4.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 498 gctccccgtggtgtaccagggccac 522 ||||||||||| ||||||||||||| Sbjct: 35046812 gctccccgtggagtaccagggccac 35046788
>dbj|AK103610.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033133J15, full insert sequence Length = 1420 Score = 60.0 bits (30), Expect = 2e-05 Identities = 57/66 (86%) Strand = Plus / Plus Query: 685 cactaccacctccgggtcaggtgccccgctctgctcaccgtcaacggagggcagggcagc 744 |||||||||||||| |||| |||||||| || ||||||||||||| || |||||||| Sbjct: 942 cactaccacctccgcgtcaactgccccgccctcctcaccgtcaacgacggcaagggcagc 1001 Query: 745 tacggc 750 |||||| Sbjct: 1002 tacggc 1007 Score = 42.1 bits (21), Expect = 4.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 498 gctccccgtggtgtaccagggccac 522 ||||||||||| ||||||||||||| Sbjct: 752 gctccccgtggagtaccagggccac 776
>dbj|AK069353.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023014D16, full insert sequence Length = 1024 Score = 60.0 bits (30), Expect = 2e-05 Identities = 57/66 (86%) Strand = Plus / Plus Query: 685 cactaccacctccgggtcaggtgccccgctctgctcaccgtcaacggagggcagggcagc 744 |||||||||||||| |||| |||||||| || ||||||||||||| || |||||||| Sbjct: 565 cactaccacctccgcgtcaactgccccgccctcctcaccgtcaacgacggcaagggcagc 624 Query: 745 tacggc 750 |||||| Sbjct: 625 tacggc 630 Score = 42.1 bits (21), Expect = 4.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 498 gctccccgtggtgtaccagggccac 522 ||||||||||| ||||||||||||| Sbjct: 375 gctccccgtggagtaccagggccac 399
>dbj|AK061257.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-B04, full insert sequence Length = 1027 Score = 60.0 bits (30), Expect = 2e-05 Identities = 57/66 (86%) Strand = Plus / Plus Query: 685 cactaccacctccgggtcaggtgccccgctctgctcaccgtcaacggagggcagggcagc 744 |||||||||||||| |||| |||||||| || ||||||||||||| || |||||||| Sbjct: 568 cactaccacctccgcgtcaactgccccgccctcctcaccgtcaacgacggcaagggcagc 627 Query: 745 tacggc 750 |||||| Sbjct: 628 tacggc 633 Score = 42.1 bits (21), Expect = 4.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 498 gctccccgtggtgtaccagggccac 522 ||||||||||| ||||||||||||| Sbjct: 378 gctccccgtggagtaccagggccac 402
>emb|AL606651.3|OSJN00092 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0088H09, complete sequence Length = 145391 Score = 60.0 bits (30), Expect = 2e-05 Identities = 57/66 (86%) Strand = Plus / Minus Query: 685 cactaccacctccgggtcaggtgccccgctctgctcaccgtcaacggagggcagggcagc 744 |||||||||||||| |||| |||||||| || ||||||||||||| || |||||||| Sbjct: 105669 cactaccacctccgcgtcaactgccccgccctcctcaccgtcaacgacggcaagggcagc 105610 Query: 745 tacggc 750 |||||| Sbjct: 105609 tacggc 105604 Score = 42.1 bits (21), Expect = 4.7 Identities = 33/37 (89%) Strand = Plus / Minus Query: 408 ccgcaaccccaacacccgcgtcggcatctacttcgac 444 |||||||||||||| ||||||||| |||||| |||| Sbjct: 95954 ccgcaaccccaacaagcgcgtcggcctctactacgac 95918 Score = 42.1 bits (21), Expect = 4.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 498 gctccccgtggtgtaccagggccac 522 ||||||||||| ||||||||||||| Sbjct: 105859 gctccccgtggagtaccagggccac 105835
>gb|CP000316.1| Polaromonas sp. JS666, complete genome Length = 5200264 Score = 52.0 bits (26), Expect = 0.005 Identities = 32/34 (94%) Strand = Plus / Minus Query: 251 tcatcctgctcatcctcctcatcatcctcatcgt 284 ||||||| ||||||||||||||| |||||||||| Sbjct: 1289483 tcatcctcctcatcctcctcatcctcctcatcgt 1289450 Score = 48.1 bits (24), Expect = 0.076 Identities = 30/32 (93%) Strand = Plus / Minus Query: 251 tcatcctgctcatcctcctcatcatcctcatc 282 ||||||| ||||||||||||||| |||||||| Sbjct: 1289492 tcatcctcctcatcctcctcatcctcctcatc 1289461
>gb|AC125019.6| Mus musculus chromosome 19, clone RP24-158H8, complete sequence Length = 162617 Score = 52.0 bits (26), Expect = 0.005 Identities = 32/34 (94%) Strand = Plus / Minus Query: 254 tcctgctcatcctcctcatcatcctcatcgtctg 287 |||||||| |||||||||||||| |||||||||| Sbjct: 123277 tcctgctcctcctcctcatcatcatcatcgtctg 123244
>dbj|AP007155.1| Aspergillus oryzae RIB40 genomic DNA, SC003 Length = 4170692 Score = 52.0 bits (26), Expect = 0.005 Identities = 29/30 (96%) Strand = Plus / Minus Query: 254 tcctgctcatcctcctcatcatcctcatcg 283 |||| ||||||||||||||||||||||||| Sbjct: 767903 tcctcctcatcctcctcatcatcctcatcg 767874
>ref|XM_662235.1| Cryptosporidium hominis TU502 CCAAT-box-binding transcription factor (Chro.80478) partial mRNA Length = 3273 Score = 52.0 bits (26), Expect = 0.005 Identities = 32/34 (94%) Strand = Plus / Minus Query: 249 catcatcctgctcatcctcctcatcatcctcatc 282 ||||||||| ||||||||||||||| |||||||| Sbjct: 3097 catcatcctcctcatcctcctcatcctcctcatc 3064 Score = 42.1 bits (21), Expect = 4.7 Identities = 30/33 (90%) Strand = Plus / Minus Query: 250 atcatcctgctcatcctcctcatcatcctcatc 282 |||||||| |||||||||||||| |||||||| Sbjct: 3105 atcatcctcatcatcctcctcatcctcctcatc 3073
>gb|DQ679221.1| Mizuhopecten yessoensis clone XY128 microsatellite sequence Length = 569 Score = 50.1 bits (25), Expect = 0.019 Identities = 28/29 (96%) Strand = Plus / Plus Query: 259 ctcatcctcctcatcatcctcatcgtctg 287 |||||||||||||||||||||||| |||| Sbjct: 73 ctcatcctcctcatcatcctcatcatctg 101
>gb|DQ221723.2| Mizuhopecten yessoensis clone PYER030 microsatellite sequence Length = 723 Score = 50.1 bits (25), Expect = 0.019 Identities = 28/29 (96%) Strand = Plus / Plus Query: 259 ctcatcctcctcatcatcctcatcgtctg 287 |||||||||||||||||||||||| |||| Sbjct: 73 ctcatcctcctcatcatcctcatcatctg 101
>gb|AC126408.6| Mus musculus chromosome 13, clone RP23-216P14, complete sequence Length = 238967 Score = 50.1 bits (25), Expect = 0.019 Identities = 25/25 (100%) Strand = Plus / Minus Query: 148 agaagaaaaaagaggaggaagaaga 172 ||||||||||||||||||||||||| Sbjct: 108118 agaagaaaaaagaggaggaagaaga 108094
>gb|AC133205.3| Mus musculus BAC clone RP23-108P11 from chromosome 13, complete sequence Length = 205640 Score = 50.1 bits (25), Expect = 0.019 Identities = 25/25 (100%) Strand = Plus / Minus Query: 148 agaagaaaaaagaggaggaagaaga 172 ||||||||||||||||||||||||| Sbjct: 31961 agaagaaaaaagaggaggaagaaga 31937
>gb|AC019315.9| Homo sapiens chromosome , clone RP11-153A6, complete sequence Length = 152057 Score = 50.1 bits (25), Expect = 0.019 Identities = 25/25 (100%) Strand = Plus / Plus Query: 148 agaagaaaaaagaggaggaagaaga 172 ||||||||||||||||||||||||| Sbjct: 151727 agaagaaaaaagaggaggaagaaga 151751
>emb|AL031843.2|HS246D7 Human DNA sequence from clone RP1-246D7 on chromosome 22q13.1-13.33, complete sequence Length = 28011 Score = 50.1 bits (25), Expect = 0.019 Identities = 34/37 (91%) Strand = Plus / Plus Query: 249 catcatcctgctcatcctcctcatcatcctcatcgtc 285 ||||||||| ||| ||||||||||||||||| ||||| Sbjct: 21771 catcatcctcctcgtcctcctcatcatcctcctcgtc 21807
>gb|AC034268.4| Homo sapiens chromosome 17, clone RP11-312B18, complete sequence Length = 198935 Score = 50.1 bits (25), Expect = 0.019 Identities = 25/25 (100%) Strand = Plus / Minus Query: 148 agaagaaaaaagaggaggaagaaga 172 ||||||||||||||||||||||||| Sbjct: 192363 agaagaaaaaagaggaggaagaaga 192339
>emb|CT834507.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCEA028N05, full insert sequence Length = 1124 Score = 48.1 bits (24), Expect = 0.076 Identities = 36/40 (90%) Strand = Plus / Plus Query: 407 cccgcaaccccaacacccgcgtcggcatctacttcgaccg 446 |||||||||||||| |||||||||| |||||| |||||| Sbjct: 452 cccgcaaccccaacgaccgcgtcggcgtctactacgaccg 491 Score = 42.1 bits (21), Expect = 4.7 Identities = 42/49 (85%) Strand = Plus / Plus Query: 276 cctcatcgtctggctcgtgctccgccccaccaggccgcgcttctacctc 324 ||||||||||| ||||| |||||||||||| || |||||||||||| Sbjct: 312 cctcatcgtctacctcgtcctccgccccacccaccctcgcttctacctc 360
>emb|CT834506.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCEA023M24, full insert sequence Length = 1124 Score = 48.1 bits (24), Expect = 0.076 Identities = 36/40 (90%) Strand = Plus / Plus Query: 407 cccgcaaccccaacacccgcgtcggcatctacttcgaccg 446 |||||||||||||| |||||||||| |||||| |||||| Sbjct: 452 cccgcaaccccaacgaccgcgtcggcgtctactacgaccg 491 Score = 42.1 bits (21), Expect = 4.7 Identities = 42/49 (85%) Strand = Plus / Plus Query: 276 cctcatcgtctggctcgtgctccgccccaccaggccgcgcttctacctc 324 ||||||||||| ||||| |||||||||||| || |||||||||||| Sbjct: 312 cctcatcgtctacctcgtcctccgccccacccaccctcgcttctacctc 360
>ref|NM_001072743.1| Oryza sativa (japonica cultivar-group) Os12g0159600 (Os12g0159600) mRNA, complete cds Length = 1055 Score = 48.1 bits (24), Expect = 0.076 Identities = 36/40 (90%) Strand = Plus / Plus Query: 407 cccgcaaccccaacacccgcgtcggcatctacttcgaccg 446 |||||||||||||| |||||||||| |||||| |||||| Sbjct: 438 cccgcaaccccaacgaccgcgtcggcgtctactacgaccg 477 Score = 42.1 bits (21), Expect = 4.7 Identities = 42/49 (85%) Strand = Plus / Plus Query: 276 cctcatcgtctggctcgtgctccgccccaccaggccgcgcttctacctc 324 ||||||||||| ||||| |||||||||||| || |||||||||||| Sbjct: 298 cctcatcgtctacctcgtcctccgccccacccaccctcgcttctacctc 346
>ref|NM_001954.4| Homo sapiens discoidin domain receptor family, member 1 (DDR1), transcript variant 2, mRNA Length = 3840 Score = 48.1 bits (24), Expect = 0.076 Identities = 33/36 (91%) Strand = Plus / Plus Query: 240 cctggtggccatcatcctgctcatcctcctcatcat 275 |||||||||||||||||||||| | || |||||||| Sbjct: 1599 cctggtggccatcatcctgctcctgctgctcatcat 1634
>dbj|AB103608.1| Homo sapiens gene for DDR protein, complete cds Length = 14673 Score = 48.1 bits (24), Expect = 0.076 Identities = 33/36 (91%) Strand = Plus / Plus Query: 240 cctggtggccatcatcctgctcatcctcctcatcat 275 |||||||||||||||||||||| | || |||||||| Sbjct: 5964 cctggtggccatcatcctgctcctgctgctcatcat 5999
>ref|NM_001045502.1| Pan troglodytes discoidin domain receptor family, member 1 (DDR1), mRNA Length = 2730 Score = 48.1 bits (24), Expect = 0.076 Identities = 33/36 (91%) Strand = Plus / Plus Query: 240 cctggtggccatcatcctgctcatcctcctcatcat 275 |||||||||||||||||||||| | || |||||||| Sbjct: 1254 cctggtggccatcatcctgctcctgctgctcatcat 1289
>ref|XM_001107898.1| PREDICTED: Macaca mulatta discoidin domain receptor family, member 1, transcript variant 2 (DDR1), mRNA Length = 2587 Score = 48.1 bits (24), Expect = 0.076 Identities = 33/36 (91%) Strand = Plus / Plus Query: 240 cctggtggccatcatcctgctcatcctcctcatcat 275 |||||||||||||||||||||| | || |||||||| Sbjct: 1057 cctggtggccatcatcctgctcctgctgctcatcat 1092
>ref|XM_001107955.1| PREDICTED: Macaca mulatta discoidin domain receptor family, member 1, transcript variant 3 (DDR1), mRNA Length = 2950 Score = 48.1 bits (24), Expect = 0.076 Identities = 33/36 (91%) Strand = Plus / Plus Query: 240 cctggtggccatcatcctgctcatcctcctcatcat 275 |||||||||||||||||||||| | || |||||||| Sbjct: 1420 cctggtggccatcatcctgctcctgctgctcatcat 1455
>ref|XM_001108805.1| PREDICTED: Macaca mulatta discoidin domain receptor family, member 1, transcript variant 18 (DDR1), mRNA Length = 2916 Score = 48.1 bits (24), Expect = 0.076 Identities = 33/36 (91%) Strand = Plus / Plus Query: 240 cctggtggccatcatcctgctcatcctcctcatcat 275 |||||||||||||||||||||| | || |||||||| Sbjct: 1788 cctggtggccatcatcctgctcctgctgctcatcat 1823
>ref|XM_001109055.1| PREDICTED: Macaca mulatta discoidin domain receptor family, member 1, transcript variant 22 (DDR1), mRNA Length = 3447 Score = 48.1 bits (24), Expect = 0.076 Identities = 33/36 (91%) Strand = Plus / Plus Query: 240 cctggtggccatcatcctgctcatcctcctcatcat 275 |||||||||||||||||||||| | || |||||||| Sbjct: 1788 cctggtggccatcatcctgctcctgctgctcatcat 1823
>ref|XM_001109112.1| PREDICTED: Macaca mulatta discoidin domain receptor family, member 1, transcript variant 23 (DDR1), mRNA Length = 3220 Score = 48.1 bits (24), Expect = 0.076 Identities = 33/36 (91%) Strand = Plus / Plus Query: 240 cctggtggccatcatcctgctcatcctcctcatcat 275 |||||||||||||||||||||| | || |||||||| Sbjct: 1788 cctggtggccatcatcctgctcctgctgctcatcat 1823
>ref|XM_001108064.1| PREDICTED: Macaca mulatta discoidin domain receptor family, member 1, transcript variant 5 (DDR1), mRNA Length = 3033 Score = 48.1 bits (24), Expect = 0.076 Identities = 33/36 (91%) Strand = Plus / Plus Query: 240 cctggtggccatcatcctgctcatcctcctcatcat 275 |||||||||||||||||||||| | || |||||||| Sbjct: 1601 cctggtggccatcatcctgctcctgctgctcatcat 1636
>ref|XM_001108007.1| PREDICTED: Macaca mulatta discoidin domain receptor family, member 1, transcript variant 4 (DDR1), mRNA Length = 3024 Score = 48.1 bits (24), Expect = 0.076 Identities = 33/36 (91%) Strand = Plus / Plus Query: 240 cctggtggccatcatcctgctcatcctcctcatcat 275 |||||||||||||||||||||| | || |||||||| Sbjct: 1592 cctggtggccatcatcctgctcctgctgctcatcat 1627
>ref|XM_001108998.1| PREDICTED: Macaca mulatta discoidin domain receptor family, member 1, transcript variant 21 (DDR1), mRNA Length = 3349 Score = 48.1 bits (24), Expect = 0.076 Identities = 33/36 (91%) Strand = Plus / Plus Query: 240 cctggtggccatcatcctgctcatcctcctcatcat 275 |||||||||||||||||||||| | || |||||||| Sbjct: 1788 cctggtggccatcatcctgctcctgctgctcatcat 1823
>ref|XM_001107705.1| PREDICTED: Macaca mulatta discoidin domain receptor family, member 1, transcript variant 1 (DDR1), mRNA Length = 3288 Score = 48.1 bits (24), Expect = 0.076 Identities = 33/36 (91%) Strand = Plus / Plus Query: 240 cctggtggccatcatcctgctcatcctcctcatcat 275 |||||||||||||||||||||| | || |||||||| Sbjct: 1758 cctggtggccatcatcctgctcctgctgctcatcat 1793
>ref|XM_001109377.1| PREDICTED: Macaca mulatta discoidin domain receptor family, member 1, transcript variant 28 (DDR1), mRNA Length = 3331 Score = 48.1 bits (24), Expect = 0.076 Identities = 33/36 (91%) Strand = Plus / Plus Query: 240 cctggtggccatcatcctgctcatcctcctcatcat 275 |||||||||||||||||||||| | || |||||||| Sbjct: 1788 cctggtggccatcatcctgctcctgctgctcatcat 1823
>ref|XM_001109326.1| PREDICTED: Macaca mulatta discoidin domain receptor family, member 1, transcript variant 27 (DDR1), mRNA Length = 3077 Score = 48.1 bits (24), Expect = 0.076 Identities = 33/36 (91%) Strand = Plus / Plus Query: 240 cctggtggccatcatcctgctcatcctcctcatcat 275 |||||||||||||||||||||| | || |||||||| Sbjct: 1534 cctggtggccatcatcctgctcctgctgctcatcat 1569
>ref|XM_001109276.1| PREDICTED: Macaca mulatta discoidin domain receptor family, member 1, transcript variant 26 (DDR1), mRNA Length = 3072 Score = 48.1 bits (24), Expect = 0.076 Identities = 33/36 (91%) Strand = Plus / Plus Query: 240 cctggtggccatcatcctgctcatcctcctcatcat 275 |||||||||||||||||||||| | || |||||||| Sbjct: 1529 cctggtggccatcatcctgctcctgctgctcatcat 1564
>ref|XM_001109224.1| PREDICTED: Macaca mulatta discoidin domain receptor family, member 1, transcript variant 25 (DDR1), mRNA Length = 3049 Score = 48.1 bits (24), Expect = 0.076 Identities = 33/36 (91%) Strand = Plus / Plus Query: 240 cctggtggccatcatcctgctcatcctcctcatcat 275 |||||||||||||||||||||| | || |||||||| Sbjct: 1506 cctggtggccatcatcctgctcctgctgctcatcat 1541
>ref|XM_001109166.1| PREDICTED: Macaca mulatta discoidin domain receptor family, member 1, transcript variant 24 (DDR1), mRNA Length = 3028 Score = 48.1 bits (24), Expect = 0.076 Identities = 33/36 (91%) Strand = Plus / Plus Query: 240 cctggtggccatcatcctgctcatcctcctcatcat 275 |||||||||||||||||||||| | || |||||||| Sbjct: 1485 cctggtggccatcatcctgctcctgctgctcatcat 1520
>ref|XM_001108897.1| PREDICTED: Macaca mulatta discoidin domain receptor family, member 1, transcript variant 20 (DDR1), mRNA Length = 3186 Score = 48.1 bits (24), Expect = 0.076 Identities = 33/36 (91%) Strand = Plus / Plus Query: 240 cctggtggccatcatcctgctcatcctcctcatcat 275 |||||||||||||||||||||| | || |||||||| Sbjct: 1656 cctggtggccatcatcctgctcctgctgctcatcat 1691
>ref|XM_001108856.1| PREDICTED: Macaca mulatta discoidin domain receptor family, member 1, transcript variant 19 (DDR1), mRNA Length = 3029 Score = 48.1 bits (24), Expect = 0.076 Identities = 33/36 (91%) Strand = Plus / Plus Query: 240 cctggtggccatcatcctgctcatcctcctcatcat 275 |||||||||||||||||||||| | || |||||||| Sbjct: 1486 cctggtggccatcatcctgctcctgctgctcatcat 1521
>ref|XM_001108764.1| PREDICTED: Macaca mulatta discoidin domain receptor family, member 1, transcript variant 17 (DDR1), mRNA Length = 3208 Score = 48.1 bits (24), Expect = 0.076 Identities = 33/36 (91%) Strand = Plus / Plus Query: 240 cctggtggccatcatcctgctcatcctcctcatcat 275 |||||||||||||||||||||| | || |||||||| Sbjct: 1678 cctggtggccatcatcctgctcctgctgctcatcat 1713
>ref|XM_001108658.1| PREDICTED: Macaca mulatta discoidin domain receptor family, member 1, transcript variant 16 (DDR1), mRNA Length = 2911 Score = 48.1 bits (24), Expect = 0.076 Identities = 33/36 (91%) Strand = Plus / Plus Query: 240 cctggtggccatcatcctgctcatcctcctcatcat 275 |||||||||||||||||||||| | || |||||||| Sbjct: 1381 cctggtggccatcatcctgctcctgctgctcatcat 1416
>ref|XM_001108611.1| PREDICTED: Macaca mulatta discoidin domain receptor family, member 1, transcript variant 15 (DDR1), mRNA Length = 3011 Score = 48.1 bits (24), Expect = 0.076 Identities = 33/36 (91%) Strand = Plus / Plus Query: 240 cctggtggccatcatcctgctcatcctcctcatcat 275 |||||||||||||||||||||| | || |||||||| Sbjct: 1481 cctggtggccatcatcctgctcctgctgctcatcat 1516
>ref|XM_001108557.1| PREDICTED: Macaca mulatta discoidin domain receptor family, member 1, transcript variant 14 (DDR1), mRNA Length = 2909 Score = 48.1 bits (24), Expect = 0.076 Identities = 33/36 (91%) Strand = Plus / Plus Query: 240 cctggtggccatcatcctgctcatcctcctcatcat 275 |||||||||||||||||||||| | || |||||||| Sbjct: 1379 cctggtggccatcatcctgctcctgctgctcatcat 1414
>ref|XM_001108506.1| PREDICTED: Macaca mulatta discoidin domain receptor family, member 1, transcript variant 13 (DDR1), mRNA Length = 2869 Score = 48.1 bits (24), Expect = 0.076 Identities = 33/36 (91%) Strand = Plus / Plus Query: 240 cctggtggccatcatcctgctcatcctcctcatcat 275 |||||||||||||||||||||| | || |||||||| Sbjct: 1339 cctggtggccatcatcctgctcctgctgctcatcat 1374
>ref|XM_001108445.1| PREDICTED: Macaca mulatta discoidin domain receptor family, member 1, transcript variant 12 (DDR1), mRNA Length = 2942 Score = 48.1 bits (24), Expect = 0.076 Identities = 33/36 (91%) Strand = Plus / Plus Query: 240 cctggtggccatcatcctgctcatcctcctcatcat 275 |||||||||||||||||||||| | || |||||||| Sbjct: 1412 cctggtggccatcatcctgctcctgctgctcatcat 1447
>ref|XM_001108387.1| PREDICTED: Macaca mulatta discoidin domain receptor family, member 1, transcript variant 11 (DDR1), mRNA Length = 2967 Score = 48.1 bits (24), Expect = 0.076 Identities = 33/36 (91%) Strand = Plus / Plus Query: 240 cctggtggccatcatcctgctcatcctcctcatcat 275 |||||||||||||||||||||| | || |||||||| Sbjct: 1437 cctggtggccatcatcctgctcctgctgctcatcat 1472
>ref|XM_001108330.1| PREDICTED: Macaca mulatta discoidin domain receptor family, member 1, transcript variant 10 (DDR1), mRNA Length = 3060 Score = 48.1 bits (24), Expect = 0.076 Identities = 33/36 (91%) Strand = Plus / Plus Query: 240 cctggtggccatcatcctgctcatcctcctcatcat 275 |||||||||||||||||||||| | || |||||||| Sbjct: 1517 cctggtggccatcatcctgctcctgctgctcatcat 1552
>ref|XM_001108273.1| PREDICTED: Macaca mulatta discoidin domain receptor family, member 1, transcript variant 9 (DDR1), mRNA Length = 3229 Score = 48.1 bits (24), Expect = 0.076 Identities = 33/36 (91%) Strand = Plus / Plus Query: 240 cctggtggccatcatcctgctcatcctcctcatcat 275 |||||||||||||||||||||| | || |||||||| Sbjct: 1699 cctggtggccatcatcctgctcctgctgctcatcat 1734
>ref|XM_001108228.1| PREDICTED: Macaca mulatta discoidin domain receptor family, member 1, transcript variant 8 (DDR1), mRNA Length = 2916 Score = 48.1 bits (24), Expect = 0.076 Identities = 33/36 (91%) Strand = Plus / Plus Query: 240 cctggtggccatcatcctgctcatcctcctcatcat 275 |||||||||||||||||||||| | || |||||||| Sbjct: 1386 cctggtggccatcatcctgctcctgctgctcatcat 1421
>ref|XM_001108173.1| PREDICTED: Macaca mulatta discoidin domain receptor family, member 1, transcript variant 7 (DDR1), mRNA Length = 2919 Score = 48.1 bits (24), Expect = 0.076 Identities = 33/36 (91%) Strand = Plus / Plus Query: 240 cctggtggccatcatcctgctcatcctcctcatcat 275 |||||||||||||||||||||| | || |||||||| Sbjct: 1389 cctggtggccatcatcctgctcctgctgctcatcat 1424
>ref|XM_001108124.1| PREDICTED: Macaca mulatta discoidin domain receptor family, member 1, transcript variant 6 (DDR1), mRNA Length = 2961 Score = 48.1 bits (24), Expect = 0.076 Identities = 33/36 (91%) Strand = Plus / Plus Query: 240 cctggtggccatcatcctgctcatcctcctcatcat 275 |||||||||||||||||||||| | || |||||||| Sbjct: 1431 cctggtggccatcatcctgctcctgctgctcatcat 1466
>dbj|AB210150.1| Pan troglodytes DDR1 gene for discoidin receptor tyrosine kinase isoform b, complete cds, cell_line: Ericka Length = 14676 Score = 48.1 bits (24), Expect = 0.076 Identities = 33/36 (91%) Strand = Plus / Plus Query: 240 cctggtggccatcatcctgctcatcctcctcatcat 275 |||||||||||||||||||||| | || |||||||| Sbjct: 5977 cctggtggccatcatcctgctcctgctgctcatcat 6012
>dbj|AB210149.1| Pan troglodytes DDR1 gene for discoidin receptor tyrosine kinase isoform b, complete cds, cell_line: Borie Length = 14676 Score = 48.1 bits (24), Expect = 0.076 Identities = 33/36 (91%) Strand = Plus / Plus Query: 240 cctggtggccatcatcctgctcatcctcctcatcat 275 |||||||||||||||||||||| | || |||||||| Sbjct: 5977 cctggtggccatcatcctgctcctgctgctcatcat 6012
>gb|AC161870.4| Mus musculus BAC clone RP24-70M22 from chromosome 14, complete sequence Length = 240578 Score = 48.1 bits (24), Expect = 0.076 Identities = 30/32 (93%) Strand = Plus / Minus Query: 251 tcatcctgctcatcctcctcatcatcctcatc 282 ||||||| ||||||||||||||| |||||||| Sbjct: 93416 tcatcctcctcatcctcctcatcctcctcatc 93385
>ref|NM_013994.2| Homo sapiens discoidin domain receptor family, member 1 (DDR1), transcript variant 3, mRNA Length = 3678 Score = 48.1 bits (24), Expect = 0.076 Identities = 33/36 (91%) Strand = Plus / Plus Query: 240 cctggtggccatcatcctgctcatcctcctcatcat 275 |||||||||||||||||||||| | || |||||||| Sbjct: 1308 cctggtggccatcatcctgctcctgctgctcatcat 1343
>ref|NM_013993.2| Homo sapiens discoidin domain receptor family, member 1 (DDR1), transcript variant 1, mRNA Length = 3877 Score = 48.1 bits (24), Expect = 0.076 Identities = 33/36 (91%) Strand = Plus / Plus Query: 240 cctggtggccatcatcctgctcatcctcctcatcat 275 |||||||||||||||||||||| | || |||||||| Sbjct: 1525 cctggtggccatcatcctgctcctgctgctcatcat 1560
>gb|BC008716.2| Homo sapiens discoidin domain receptor family, member 1, mRNA (cDNA clone MGC:8681 IMAGE:2964574), complete cds Length = 3840 Score = 48.1 bits (24), Expect = 0.076 Identities = 33/36 (91%) Strand = Plus / Plus Query: 240 cctggtggccatcatcctgctcatcctcctcatcat 275 |||||||||||||||||||||| | || |||||||| Sbjct: 1599 cctggtggccatcatcctgctcctgctgctcatcat 1634
>gb|BC013400.2| Homo sapiens discoidin domain receptor family, member 1, mRNA (cDNA clone MGC:3909 IMAGE:2964574), complete cds Length = 3840 Score = 48.1 bits (24), Expect = 0.076 Identities = 33/36 (91%) Strand = Plus / Plus Query: 240 cctggtggccatcatcctgctcatcctcctcatcat 275 |||||||||||||||||||||| | || |||||||| Sbjct: 1599 cctggtggccatcatcctgctcctgctgctcatcat 1634
>ref|XM_658404.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN5892.2), mRNA Length = 2229 Score = 48.1 bits (24), Expect = 0.076 Identities = 30/32 (93%) Strand = Plus / Minus Query: 251 tcatcctgctcatcctcctcatcatcctcatc 282 ||||||| ||||||||||||||| |||||||| Sbjct: 488 tcatcctcctcatcctcctcatcctcctcatc 457 Score = 42.1 bits (21), Expect = 4.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 251 tcatcctgctcatcctcctcatcatcctc 279 ||||||| ||||||||||||||| ||||| Sbjct: 479 tcatcctcctcatcctcctcatcctcctc 451
>gb|AC119943.12| Mus musculus chromosome 10, clone RP24-271F24, complete sequence Length = 174009 Score = 48.1 bits (24), Expect = 0.076 Identities = 24/24 (100%) Strand = Plus / Minus Query: 146 gaagaagaaaaaagaggaggaaga 169 |||||||||||||||||||||||| Sbjct: 121243 gaagaagaaaaaagaggaggaaga 121220
>gb|AC142107.2| Mus musculus BAC clone RP24-192I1 from chromosome 14, complete sequence Length = 160766 Score = 48.1 bits (24), Expect = 0.076 Identities = 30/32 (93%) Strand = Plus / Plus Query: 251 tcatcctgctcatcctcctcatcatcctcatc 282 ||||||| ||||||||||||||| |||||||| Sbjct: 38995 tcatcctcctcatcctcctcatcctcctcatc 39026
>gb|AC130969.4| Rattus norvegicus 2 BAC CH230-105B13 (Children's Hospital Oakland Research Institute) complete sequence Length = 238254 Score = 48.1 bits (24), Expect = 0.076 Identities = 30/32 (93%) Strand = Plus / Minus Query: 251 tcatcctgctcatcctcctcatcatcctcatc 282 ||||||| ||||||||||||||| |||||||| Sbjct: 233147 tcatcctcctcatcctcctcatcctcctcatc 233116 Score = 48.1 bits (24), Expect = 0.076 Identities = 30/32 (93%) Strand = Plus / Minus Query: 251 tcatcctgctcatcctcctcatcatcctcatc 282 ||||||| ||||||||||||||| |||||||| Sbjct: 233180 tcatcctcctcatcctcctcatcctcctcatc 233149 Score = 48.1 bits (24), Expect = 0.076 Identities = 30/32 (93%) Strand = Plus / Minus Query: 251 tcatcctgctcatcctcctcatcatcctcatc 282 ||||||| ||||||||||||||| |||||||| Sbjct: 233219 tcatcctcctcatcctcctcatcctcctcatc 233188 Score = 48.1 bits (24), Expect = 0.076 Identities = 30/32 (93%) Strand = Plus / Minus Query: 251 tcatcctgctcatcctcctcatcatcctcatc 282 ||||||| ||||||||||||||| |||||||| Sbjct: 233282 tcatcctcctcatcctcctcatcctcctcatc 233251 Score = 42.1 bits (21), Expect = 4.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 254 tcctgctcatcctcctcatcatcctcatc 282 |||| ||||||||||||||| |||||||| Sbjct: 233312 tcctcctcatcctcctcatcctcctcatc 233284 Score = 42.1 bits (21), Expect = 4.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 254 tcctgctcatcctcctcatcatcctcatc 282 |||| ||||||||||||||| |||||||| Sbjct: 233360 tcctcctcatcctcctcatcctcctcatc 233332
>gb|AC113114.9| Mus musculus chromosome 17, clone RP23-338H10, complete sequence Length = 183828 Score = 48.1 bits (24), Expect = 0.076 Identities = 30/32 (93%) Strand = Plus / Minus Query: 251 tcatcctgctcatcctcctcatcatcctcatc 282 ||||||| |||||||||||| ||||||||||| Sbjct: 86221 tcatcctcctcatcctcctcctcatcctcatc 86190
>ref|NM_013137.1| Rattus norvegicus discoidin domain receptor family, member 1 (Ddr1), mRNA Length = 2733 Score = 48.1 bits (24), Expect = 0.076 Identities = 33/36 (91%) Strand = Plus / Plus Query: 240 cctggtggccatcatcctgctcatcctcctcatcat 275 |||||||||||||||||| ||| ||||||| ||||| Sbjct: 1257 cctggtggccatcatccttctcctcctccttatcat 1292
>dbj|AB202100.1| Homo sapiens DDR1 gene for discoidin domain receptor family, member 1, complete cds Length = 14673 Score = 48.1 bits (24), Expect = 0.076 Identities = 33/36 (91%) Strand = Plus / Plus Query: 240 cctggtggccatcatcctgctcatcctcctcatcat 275 |||||||||||||||||||||| | || |||||||| Sbjct: 5964 cctggtggccatcatcctgctcctgctgctcatcat 5999
>gb|AC171140.2| Helobdella robusta clone CH306-1B2, complete sequence Length = 105143 Score = 48.1 bits (24), Expect = 0.076 Identities = 30/32 (93%) Strand = Plus / Minus Query: 251 tcatcctgctcatcctcctcatcatcctcatc 282 ||||||| ||||||||| |||||||||||||| Sbjct: 64549 tcatcctcctcatcctcatcatcatcctcatc 64518
>dbj|AK137232.1| Mus musculus adult male urinary bladder cDNA, RIKEN full-length enriched library, clone:9530059B22 product:hypothetical protein, full insert sequence Length = 3323 Score = 48.1 bits (24), Expect = 0.076 Identities = 24/24 (100%) Strand = Plus / Minus Query: 146 gaagaagaaaaaagaggaggaaga 169 |||||||||||||||||||||||| Sbjct: 1161 gaagaagaaaaaagaggaggaaga 1138
>gb|BT008202.1| Synthetic construct Homo sapiens discoidin domain receptor family, member 1 mRNA, partial cds Length = 2631 Score = 48.1 bits (24), Expect = 0.076 Identities = 33/36 (91%) Strand = Plus / Plus Query: 240 cctggtggccatcatcctgctcatcctcctcatcat 275 |||||||||||||||||||||| | || |||||||| Sbjct: 1266 cctggtggccatcatcctgctcctgctgctcatcat 1301
>gb|BC070070.1| Homo sapiens discoidin domain receptor family, member 1, mRNA (cDNA clone MGC:87336 IMAGE:5262509), complete cds Length = 3609 Score = 48.1 bits (24), Expect = 0.076 Identities = 33/36 (91%) Strand = Plus / Plus Query: 240 cctggtggccatcatcctgctcatcctcctcatcat 275 |||||||||||||||||||||| | || |||||||| Sbjct: 1370 cctggtggccatcatcctgctcctgctgctcatcat 1405
>emb|CR788303.14| Zebrafish DNA sequence from clone DKEY-178E17 in linkage group 8, complete sequence Length = 175313 Score = 48.1 bits (24), Expect = 0.076 Identities = 27/28 (96%) Strand = Plus / Minus Query: 146 gaagaagaaaaaagaggaggaagaagat 173 ||||||||| |||||||||||||||||| Sbjct: 165399 gaagaagaagaaagaggaggaagaagat 165372
>gb|AC084701.5| Homo sapiens chromosome 18, clone RP11-1005F9, complete sequence Length = 140712 Score = 48.1 bits (24), Expect = 0.076 Identities = 24/24 (100%) Strand = Plus / Plus Query: 146 gaagaagaaaaaagaggaggaaga 169 |||||||||||||||||||||||| Sbjct: 73579 gaagaagaaaaaagaggaggaaga 73602
>gb|AC148705.1| Macaca mulatta Major Histocompatibility Complex MMU348N13, complete sequence Length = 186491 Score = 48.1 bits (24), Expect = 0.076 Identities = 33/36 (91%) Strand = Plus / Plus Query: 240 cctggtggccatcatcctgctcatcctcctcatcat 275 |||||||||||||||||||||| | || |||||||| Sbjct: 179295 cctggtggccatcatcctgctcctgctgctcatcat 179330
>gb|AC148704.1| Macaca mulatta Major Histocompatibility Complex BAC MMU337E21, complete sequence Length = 147539 Score = 48.1 bits (24), Expect = 0.076 Identities = 33/36 (91%) Strand = Plus / Plus Query: 240 cctggtggccatcatcctgctcatcctcctcatcat 275 |||||||||||||||||||||| | || |||||||| Sbjct: 80765 cctggtggccatcatcctgctcctgctgctcatcat 80800
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12 Length = 27566993 Score = 48.1 bits (24), Expect = 0.076 Identities = 36/40 (90%) Strand = Plus / Minus Query: 407 cccgcaaccccaacacccgcgtcggcatctacttcgaccg 446 |||||||||||||| |||||||||| |||||| |||||| Sbjct: 2979463 cccgcaaccccaacgaccgcgtcggcgtctactacgaccg 2979424 Score = 42.1 bits (21), Expect = 4.7 Identities = 42/49 (85%) Strand = Plus / Minus Query: 276 cctcatcgtctggctcgtgctccgccccaccaggccgcgcttctacctc 324 ||||||||||| ||||| |||||||||||| || |||||||||||| Sbjct: 2979603 cctcatcgtctacctcgtcctccgccccacccaccctcgcttctacctc 2979555
>dbj|AB128049.1| Macaca mulatta genes, MHC class I region, partial and complete cds Length = 3284914 Score = 48.1 bits (24), Expect = 0.076 Identities = 33/36 (91%) Strand = Plus / Minus Query: 240 cctggtggccatcatcctgctcatcctcctcatcat 275 |||||||||||||||||||||| | || |||||||| Sbjct: 1546758 cctggtggccatcatcctgctcctgctgctcatcat 1546723
>dbj|AB210021.1| Homo sapiens mRNA for DDR1 variant protein, partial cds, clone: fk11093 Length = 3641 Score = 48.1 bits (24), Expect = 0.076 Identities = 33/36 (91%) Strand = Plus / Plus Query: 240 cctggtggccatcatcctgctcatcctcctcatcat 275 |||||||||||||||||||||| | || |||||||| Sbjct: 1420 cctggtggccatcatcctgctcctgctgctcatcat 1455
>emb|AL773589.3| Human DNA sequence from clone DAQB-196C18 on chromosome 6 Contains the central part of the DDR1 gene for discoidin domain receptor family, member 1, and no CpG islands, complete sequence Length = 15168 Score = 48.1 bits (24), Expect = 0.076 Identities = 33/36 (91%) Strand = Plus / Plus Query: 240 cctggtggccatcatcctgctcatcctcctcatcat 275 |||||||||||||||||||||| | || |||||||| Sbjct: 11070 cctggtggccatcatcctgctcctgctgctcatcat 11105
>emb|AL662870.16| Human DNA sequence from clone XXbac-70P20 on chromosome 6 contains the DDR1 gene for discoidin domain receptor family, member 1, a putative novel transcript and two CpG islands, complete sequence Length = 61698 Score = 48.1 bits (24), Expect = 0.076 Identities = 33/36 (91%) Strand = Plus / Plus Query: 240 cctggtggccatcatcctgctcatcctcctcatcat 275 |||||||||||||||||||||| | || |||||||| Sbjct: 46800 cctggtggccatcatcctgctcctgctgctcatcat 46835
>emb|AL662854.7| Human DNA sequence from clone XXbac-105N19 on chromosome 6 contains the DDR1 gene for discoidin domain receptor family, member 1, the GTF2H4 gene for general transcrition factor IIH, polypeptide 4, 52kDa, the gene for KIAA1885 protein, two putative novel transcripts, the gene for DPCR1 protein and four CpG islands, complete sequence Length = 84474 Score = 48.1 bits (24), Expect = 0.076 Identities = 33/36 (91%) Strand = Plus / Plus Query: 240 cctggtggccatcatcctgctcatcctcctcatcat 275 |||||||||||||||||||||| | || |||||||| Sbjct: 17937 cctggtggccatcatcctgctcctgctgctcatcat 17972
>gb|S77556.1| Ptk-3S=radiation-induced gene {alternatively spliced} [rats, neonatal Sprague-Dawley, brain primary astrocyte, mRNA Partial, 549 nt] Length = 549 Score = 48.1 bits (24), Expect = 0.076 Identities = 33/36 (91%) Strand = Plus / Plus Query: 240 cctggtggccatcatcctgctcatcctcctcatcat 275 |||||||||||||||||| ||| ||||||| ||||| Sbjct: 57 cctggtggccatcatccttctcctcctccttatcat 92
>gb|S77585.1| Ptk-3L=radiation-induced gene [rats, neonatal Sprague-Dawley, brain primary astrocyte, mRNA Partial, 660 nt] Length = 660 Score = 48.1 bits (24), Expect = 0.076 Identities = 33/36 (91%) Strand = Plus / Plus Query: 240 cctggtggccatcatcctgctcatcctcctcatcat 275 |||||||||||||||||| ||| ||||||| ||||| Sbjct: 57 cctggtggccatcatccttctcctcctccttatcat 92
>gb|AC013660.9| Homo sapiens, clone RP11-20A14, complete sequence Length = 164324 Score = 48.1 bits (24), Expect = 0.076 Identities = 24/24 (100%) Strand = Plus / Minus Query: 146 gaagaagaaaaaagaggaggaaga 169 |||||||||||||||||||||||| Sbjct: 21792 gaagaagaaaaaagaggaggaaga 21769
>emb|Z29093.1|HSRETYK1 H.sapiens EDDR1 gene for receptor tyrosine kinase Length = 3841 Score = 48.1 bits (24), Expect = 0.076 Identities = 33/36 (91%) Strand = Plus / Plus Query: 240 cctggtggccatcatcctgctcatcctcctcatcat 275 |||||||||||||||||||||| | || |||||||| Sbjct: 1602 cctggtggccatcatcctgctcctgctgctcatcat 1637
>emb|X74979.1|HSTRKE H.sapiens TRK E mRNA Length = 3554 Score = 48.1 bits (24), Expect = 0.076 Identities = 33/36 (91%) Strand = Plus / Plus Query: 240 cctggtggccatcatcctgctcatcctcctcatcat 275 |||||||||||||||||||||| | || |||||||| Sbjct: 1311 cctggtggccatcatcctgctcctgctgctcatcat 1346
>gb|AY335786.1| Synthetic construct Homo sapiens discoidin domain receptor family, member 1 (DDR1) mRNA, partial cds Length = 2631 Score = 48.1 bits (24), Expect = 0.076 Identities = 33/36 (91%) Strand = Plus / Plus Query: 240 cctggtggccatcatcctgctcatcctcctcatcat 275 |||||||||||||||||||||| | || |||||||| Sbjct: 1266 cctggtggccatcatcctgctcctgctgctcatcat 1301
>emb|BX883047.1| Rattus norvegicus chromosome 20, major histocompatibility complex, assembled from 40 BACs, strain Brown Norway (BN/ssNHsd), RT1n haplotype; segment 6/11 Length = 349571 Score = 48.1 bits (24), Expect = 0.076 Identities = 33/36 (91%) Strand = Plus / Minus Query: 240 cctggtggccatcatcctgctcatcctcctcatcat 275 |||||||||||||||||| ||| ||||||| ||||| Sbjct: 266765 cctggtggccatcatccttctcctcctccttatcat 266730
>gb|AC104785.5| Homo sapiens BAC clone RP11-84C13 from 4, complete sequence Length = 112003 Score = 48.1 bits (24), Expect = 0.076 Identities = 24/24 (100%) Strand = Plus / Plus Query: 147 aagaagaaaaaagaggaggaagaa 170 |||||||||||||||||||||||| Sbjct: 42297 aagaagaaaaaagaggaggaagaa 42320
>dbj|BA000025.2| Homo sapiens genomic DNA, chromosome 6p21.3, HLA Class I region Length = 2229817 Score = 48.1 bits (24), Expect = 0.076 Identities = 33/36 (91%) Strand = Plus / Minus Query: 240 cctggtggccatcatcctgctcatcctcctcatcat 275 |||||||||||||||||||||| | || |||||||| Sbjct: 1048747 cctggtggccatcatcctgctcctgctgctcatcat 1048712
>emb|CR759747.7| Human DNA sequence from clone DADB-160J14 on chromosome 6, complete sequence Length = 114883 Score = 48.1 bits (24), Expect = 0.076 Identities = 33/36 (91%) Strand = Plus / Plus Query: 240 cctggtggccatcatcctgctcatcctcctcatcat 275 |||||||||||||||||||||| | || |||||||| Sbjct: 9152 cctggtggccatcatcctgctcctgctgctcatcat 9187
>dbj|BA000041.2| Pan troglodytes DNA, major histocompatibility complex class I region Length = 1750601 Score = 48.1 bits (24), Expect = 0.076 Identities = 33/36 (91%) Strand = Plus / Minus Query: 240 cctggtggccatcatcctgctcatcctcctcatcat 275 |||||||||||||||||||||| | || |||||||| Sbjct: 622871 cctggtggccatcatcctgctcctgctgctcatcat 622836
>emb|BX927194.9| Human DNA sequence from clone DAMA-342O2 on chromosome 6, complete sequence Length = 110208 Score = 48.1 bits (24), Expect = 0.076 Identities = 33/36 (91%) Strand = Plus / Plus Query: 240 cctggtggccatcatcctgctcatcctcctcatcat 275 |||||||||||||||||||||| | || |||||||| Sbjct: 67195 cctggtggccatcatcctgctcctgctgctcatcat 67230
>dbj|AK130776.1| Homo sapiens cDNA FLJ27266 fis, clone TMS00356, highly similar to Epithelial discoidin domain receptor 1 precursor (EC 2.7.1.112) Length = 1593 Score = 48.1 bits (24), Expect = 0.076 Identities = 33/36 (91%) Strand = Plus / Plus Query: 240 cctggtggccatcatcctgctcatcctcctcatcat 275 |||||||||||||||||||||| | || |||||||| Sbjct: 654 cctggtggccatcatcctgctcctgctgctcatcat 689
>dbj|AK104185.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-302-D07, full insert sequence Length = 1021 Score = 48.1 bits (24), Expect = 0.076 Identities = 36/40 (90%) Strand = Plus / Plus Query: 407 cccgcaaccccaacacccgcgtcggcatctacttcgaccg 446 |||||||||||||| |||||||||| |||||| |||||| Sbjct: 315 cccgcaaccccaacgaccgcgtcggcgtctactacgaccg 354 Score = 42.1 bits (21), Expect = 4.7 Identities = 42/49 (85%) Strand = Plus / Plus Query: 276 cctcatcgtctggctcgtgctccgccccaccaggccgcgcttctacctc 324 ||||||||||| ||||| |||||||||||| || |||||||||||| Sbjct: 175 cctcatcgtctacctcgtcctccgccccacccaccctcgcttctacctc 223
>dbj|AK061582.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-311-H12, full insert sequence Length = 1034 Score = 48.1 bits (24), Expect = 0.076 Identities = 36/40 (90%) Strand = Plus / Plus Query: 407 cccgcaaccccaacacccgcgtcggcatctacttcgaccg 446 |||||||||||||| |||||||||| |||||| |||||| Sbjct: 328 cccgcaaccccaacgaccgcgtcggcgtctactacgaccg 367 Score = 42.1 bits (21), Expect = 4.7 Identities = 42/49 (85%) Strand = Plus / Plus Query: 276 cctcatcgtctggctcgtgctccgccccaccaggccgcgcttctacctc 324 ||||||||||| ||||| |||||||||||| || |||||||||||| Sbjct: 188 cctcatcgtctacctcgtcctccgccccacccaccctcgcttctacctc 236
>gb|AY892205.1| Synthetic construct Homo sapiens clone FLH012771.01L discoidin domain receptor family member 1 (DDR1) mRNA, partial cds Length = 2631 Score = 48.1 bits (24), Expect = 0.076 Identities = 33/36 (91%) Strand = Plus / Plus Query: 240 cctggtggccatcatcctgctcatcctcctcatcat 275 |||||||||||||||||||||| | || |||||||| Sbjct: 1266 cctggtggccatcatcctgctcctgctgctcatcat 1301
>gb|AY892204.1| Synthetic construct Homo sapiens clone FLH012770.01L discoidin domain receptor family member 1 (DDR1) mRNA, partial cds Length = 2631 Score = 48.1 bits (24), Expect = 0.076 Identities = 33/36 (91%) Strand = Plus / Plus Query: 240 cctggtggccatcatcctgctcatcctcctcatcat 275 |||||||||||||||||||||| | || |||||||| Sbjct: 1266 cctggtggccatcatcctgctcctgctgctcatcat 1301
>gb|AF083424.1|AF083424 Ateline herpesvirus 3 complete genome Length = 108409 Score = 48.1 bits (24), Expect = 0.076 Identities = 30/32 (93%) Strand = Plus / Plus Query: 251 tcatcctgctcatcctcctcatcatcctcatc 282 ||||||| ||||||||||||||| |||||||| Sbjct: 62943 tcatcctcctcatcctcctcatcctcctcatc 62974 Score = 48.1 bits (24), Expect = 0.076 Identities = 30/32 (93%) Strand = Plus / Plus Query: 251 tcatcctgctcatcctcctcatcatcctcatc 282 ||||||| ||||||||||||||| |||||||| Sbjct: 62952 tcatcctcctcatcctcctcatcctcctcatc 62983 Score = 48.1 bits (24), Expect = 0.076 Identities = 30/32 (93%) Strand = Plus / Plus Query: 251 tcatcctgctcatcctcctcatcatcctcatc 282 ||||||| ||||||||||||||| |||||||| Sbjct: 62961 tcatcctcctcatcctcctcatcctcctcatc 62992 Score = 48.1 bits (24), Expect = 0.076 Identities = 30/32 (93%) Strand = Plus / Plus Query: 251 tcatcctgctcatcctcctcatcatcctcatc 282 ||||||| ||||||||||||||| |||||||| Sbjct: 62970 tcatcctcctcatcctcctcatcctcctcatc 63001 Score = 48.1 bits (24), Expect = 0.076 Identities = 30/32 (93%) Strand = Plus / Plus Query: 251 tcatcctgctcatcctcctcatcatcctcatc 282 ||||||| ||||||||||||||| |||||||| Sbjct: 62979 tcatcctcctcatcctcctcatcctcctcatc 63010 Score = 48.1 bits (24), Expect = 0.076 Identities = 30/32 (93%) Strand = Plus / Plus Query: 251 tcatcctgctcatcctcctcatcatcctcatc 282 ||||||| ||||||||||||||| |||||||| Sbjct: 62988 tcatcctcctcatcctcctcatcctcctcatc 63019 Score = 42.1 bits (21), Expect = 4.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 254 tcctgctcatcctcctcatcatcctcatc 282 |||| ||||||||||||||| |||||||| Sbjct: 62829 tcctcctcatcctcctcatcctcctcatc 62857 Score = 42.1 bits (21), Expect = 4.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 251 tcatcctgctcatcctcctcatcatcctc 279 ||||||| ||||||||||||||| ||||| Sbjct: 62835 tcatcctcctcatcctcctcatcctcctc 62863 Score = 42.1 bits (21), Expect = 4.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 254 tcctgctcatcctcctcatcatcctcatc 282 |||| ||||||||||||||| |||||||| Sbjct: 62937 tcctcctcatcctcctcatcctcctcatc 62965 Score = 42.1 bits (21), Expect = 4.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 251 tcatcctgctcatcctcctcatcatcctc 279 ||||||| ||||||||||||||| ||||| Sbjct: 62997 tcatcctcctcatcctcctcatcctcctc 63025
>dbj|AB088102.1| Homo sapiens DDR gene for receptor tyrosine kinase, complete cds Length = 14673 Score = 48.1 bits (24), Expect = 0.076 Identities = 33/36 (91%) Strand = Plus / Plus Query: 240 cctggtggccatcatcctgctcatcctcctcatcat 275 |||||||||||||||||||||| | || |||||||| Sbjct: 5964 cctggtggccatcatcctgctcctgctgctcatcat 5999
>emb|X99027.1|HSDRTK9 H.sapiens gene encoding discoidin receptor tyrosine kinase, exon 9 Length = 266 Score = 48.1 bits (24), Expect = 0.076 Identities = 33/36 (91%) Strand = Plus / Plus Query: 240 cctggtggccatcatcctgctcatcctcctcatcat 275 |||||||||||||||||||||| | || |||||||| Sbjct: 136 cctggtggccatcatcctgctcctgctgctcatcat 171
>ref|XM_671331.1| Plasmodium berghei strain ANKA hypothetical protein (PB000807.03.0) partial mRNA Length = 2199 Score = 48.1 bits (24), Expect = 0.076 Identities = 30/32 (93%) Strand = Plus / Minus Query: 251 tcatcctgctcatcctcctcatcatcctcatc 282 ||||||| ||||||||||||||| |||||||| Sbjct: 1223 tcatcctcctcatcctcctcatcctcctcatc 1192
>gb|U48705.1|HSU48705 Human receptor tyrosine kinase DDR gene, complete cds Length = 12010 Score = 48.1 bits (24), Expect = 0.076 Identities = 33/36 (91%) Strand = Plus / Plus Query: 240 cctggtggccatcatcctgctcatcctcctcatcat 275 |||||||||||||||||||||| | || |||||||| Sbjct: 5184 cctggtggccatcatcctgctcctgctgctcatcat 5219
>gb|AC004211.1|AC004211 Homo sapiens clone UWGC:Y67C112 from 6p21, complete sequence Length = 48731 Score = 48.1 bits (24), Expect = 0.076 Identities = 33/36 (91%) Strand = Plus / Minus Query: 240 cctggtggccatcatcctgctcatcctcctcatcat 275 |||||||||||||||||||||| | || |||||||| Sbjct: 30411 cctggtggccatcatcctgctcctgctgctcatcat 30376
>emb|AL844498.4|CNS08CAV Oryza sativa chromosome 12, . BAC OSJNBb0059G18 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 145661 Score = 48.1 bits (24), Expect = 0.076 Identities = 36/40 (90%) Strand = Plus / Plus Query: 407 cccgcaaccccaacacccgcgtcggcatctacttcgaccg 446 |||||||||||||| |||||||||| |||||| |||||| Sbjct: 36639 cccgcaaccccaacgaccgcgtcggcgtctactacgaccg 36678 Score = 42.1 bits (21), Expect = 4.7 Identities = 42/49 (85%) Strand = Plus / Plus Query: 276 cctcatcgtctggctcgtgctccgccccaccaggccgcgcttctacctc 324 ||||||||||| ||||| |||||||||||| || |||||||||||| Sbjct: 36499 cctcatcgtctacctcgtcctccgccccacccaccctcgcttctacctc 36547
>gb|L57508.1|HUMCAKA Homo sapiens Cak receptor kinase mRNA, complete cds Length = 3692 Score = 48.1 bits (24), Expect = 0.076 Identities = 33/36 (91%) Strand = Plus / Plus Query: 240 cctggtggccatcatcctgctcatcctcctcatcat 275 |||||||||||||||||||||| | || |||||||| Sbjct: 1458 cctggtggccatcatcctgctcctgctgctcatcat 1493
>dbj|AB023050.1| Homo sapiens genomic DNA, chromosome 6p21.3, HLA class I region, clone:832F2, complete sequence Length = 112018 Score = 48.1 bits (24), Expect = 0.076 Identities = 33/36 (91%) Strand = Plus / Minus Query: 240 cctggtggccatcatcctgctcatcctcctcatcat 275 |||||||||||||||||||||| | || |||||||| Sbjct: 23777 cctggtggccatcatcctgctcctgctgctcatcat 23742
>gb|L26525.1|RATPTK3D Rattus norvegicus tyrosine kinase receptor (Ptk-3) gene, complete cds Length = 3743 Score = 48.1 bits (24), Expect = 0.076 Identities = 33/36 (91%) Strand = Plus / Plus Query: 240 cctggtggccatcatcctgctcatcctcctcatcat 275 |||||||||||||||||| ||| ||||||| ||||| Sbjct: 1434 cctggtggccatcatccttctcctcctccttatcat 1469
>gb|L20817.1|HUMCAK Homo sapiens tyrosine protein kinase (CAK) gene, complete cds Length = 3803 Score = 48.1 bits (24), Expect = 0.076 Identities = 33/36 (91%) Strand = Plus / Plus Query: 240 cctggtggccatcatcctgctcatcctcctcatcat 275 |||||||||||||||||||||| | || |||||||| Sbjct: 1458 cctggtggccatcatcctgctcctgctgctcatcat 1493
>gb|L11315.1|HUMRTK Homo sapiens receptor tyrosine kinase mRNA, complete cds Length = 3738 Score = 48.1 bits (24), Expect = 0.076 Identities = 33/36 (91%) Strand = Plus / Plus Query: 240 cctggtggccatcatcctgctcatcctcctcatcat 275 |||||||||||||||||||||| | || |||||||| Sbjct: 1407 cctggtggccatcatcctgctcctgctgctcatcat 1442
>ref|XM_001181095.1| PREDICTED: Strongylocentrotus purpuratus similar to integrin alpha-ps (LOC593469), mRNA Length = 1470 Score = 46.1 bits (23), Expect = 0.30 Identities = 29/31 (93%) Strand = Plus / Plus Query: 249 catcatcctgctcatcctcctcatcatcctc 279 ||||||||| ||||||||||||||| ||||| Sbjct: 1317 catcatccttctcatcctcctcatcctcctc 1347
>ref|XM_792942.2| PREDICTED: Strongylocentrotus purpuratus similar to integrin alpha-ps (LOC593469), mRNA Length = 1470 Score = 46.1 bits (23), Expect = 0.30 Identities = 29/31 (93%) Strand = Plus / Plus Query: 249 catcatcctgctcatcctcctcatcatcctc 279 ||||||||| ||||||||||||||| ||||| Sbjct: 1317 catcatccttctcatcctcctcatcctcctc 1347
>emb|CT025541.14| Mouse DNA sequence from clone RP23-479F10 on chromosome 17, complete sequence Length = 190685 Score = 46.1 bits (23), Expect = 0.30 Identities = 26/27 (96%) Strand = Plus / Plus Query: 146 gaagaagaaaaaagaggaggaagaaga 172 |||||||||||||||||| |||||||| Sbjct: 116233 gaagaagaaaaaagaggaagaagaaga 116259 Score = 42.1 bits (21), Expect = 4.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 254 tcctgctcatcctcctcatcatcctcatc 282 |||||||| |||||||| ||||||||||| Sbjct: 116917 tcctgctcctcctcctcctcatcctcatc 116889
>gb|AC186754.1| Musa balbisiana clone MBP_81C12, complete sequence Length = 142973 Score = 46.1 bits (23), Expect = 0.30 Identities = 23/23 (100%) Strand = Plus / Plus Query: 147 aagaagaaaaaagaggaggaaga 169 ||||||||||||||||||||||| Sbjct: 140014 aagaagaaaaaagaggaggaaga 140036
>ref|XM_994047.1| PREDICTED: Mus musculus hypothetical protein LOC672514 (LOC672514), mRNA Length = 576 Score = 46.1 bits (23), Expect = 0.30 Identities = 29/31 (93%) Strand = Plus / Minus Query: 249 catcatcctgctcatcctcctcatcatcctc 279 ||||||||| ||| ||||||||||||||||| Sbjct: 469 catcatcctcctcctcctcctcatcatcctc 439
>ref|XM_987857.1| PREDICTED: Mus musculus hypothetical protein LOC667029 (LOC667029), mRNA Length = 768 Score = 46.1 bits (23), Expect = 0.30 Identities = 29/31 (93%) Strand = Plus / Minus Query: 249 catcatcctgctcatcctcctcatcatcctc 279 ||||||||| ||| ||||||||||||||||| Sbjct: 661 catcatcctcctcctcctcctcatcatcctc 631 Score = 44.1 bits (22), Expect = 1.2 Identities = 25/26 (96%) Strand = Plus / Minus Query: 251 tcatcctgctcatcctcctcatcatc 276 ||||||| |||||||||||||||||| Sbjct: 518 tcatcctcctcatcctcctcatcatc 493 Score = 42.1 bits (21), Expect = 4.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 254 tcctgctcatcctcctcatcatcctcatc 282 |||| ||||||||||||||| |||||||| Sbjct: 524 tcctcctcatcctcctcatcctcctcatc 496
>gb|AC155174.2| Pan troglodytes BAC clone CH251-396C20 from chromosome unknown, complete sequence Length = 185465 Score = 46.1 bits (23), Expect = 0.30 Identities = 26/27 (96%) Strand = Plus / Minus Query: 244 gtggccatcatcctgctcatcctcctc 270 |||||||||||||| |||||||||||| Sbjct: 156715 gtggccatcatcctcctcatcctcctc 156689
>ref|XM_639616.1| Dictyostelium discoideum AX4 hypothetical protein (DDBDRAFT_0168049) mRNA, complete cds Length = 753 Score = 46.1 bits (23), Expect = 0.30 Identities = 23/23 (100%) Strand = Plus / Plus Query: 260 tcatcctcctcatcatcctcatc 282 ||||||||||||||||||||||| Sbjct: 367 tcatcctcctcatcatcctcatc 389
>ref|XM_639450.1| Dictyostelium discoideum AX4 hypothetical protein (DDBDRAFT_0217339) mRNA, complete cds Length = 753 Score = 46.1 bits (23), Expect = 0.30 Identities = 23/23 (100%) Strand = Plus / Plus Query: 260 tcatcctcctcatcatcctcatc 282 ||||||||||||||||||||||| Sbjct: 367 tcatcctcctcatcatcctcatc 389
>ref|XM_874293.1| PREDICTED: Bos taurus nucleolin, transcript variant 9 (NCL), mRNA Length = 2862 Score = 46.1 bits (23), Expect = 0.30 Identities = 32/35 (91%) Strand = Plus / Minus Query: 251 tcatcctgctcatcctcctcatcatcctcatcgtc 285 ||||||| |||||||||||| || ||||||||||| Sbjct: 728 tcatcctcctcatcctcctcctcctcctcatcgtc 694 Score = 42.1 bits (21), Expect = 4.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 258 gctcatcctcctcatcatcctcatcgtct 286 ||||||||||||| ||||| ||||||||| Sbjct: 613 gctcatcctcctcttcatcatcatcgtct 585
>ref|XM_874208.1| PREDICTED: Bos taurus nucleolin, transcript variant 8 (NCL), mRNA Length = 2631 Score = 46.1 bits (23), Expect = 0.30 Identities = 32/35 (91%) Strand = Plus / Minus Query: 251 tcatcctgctcatcctcctcatcatcctcatcgtc 285 ||||||| |||||||||||| || ||||||||||| Sbjct: 728 tcatcctcctcatcctcctcctcctcctcatcgtc 694 Score = 42.1 bits (21), Expect = 4.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 258 gctcatcctcctcatcatcctcatcgtct 286 ||||||||||||| ||||| ||||||||| Sbjct: 613 gctcatcctcctcttcatcatcatcgtct 585
>ref|XM_874117.1| PREDICTED: Bos taurus nucleolin, transcript variant 7 (NCL), mRNA Length = 2613 Score = 46.1 bits (23), Expect = 0.30 Identities = 32/35 (91%) Strand = Plus / Minus Query: 251 tcatcctgctcatcctcctcatcatcctcatcgtc 285 ||||||| |||||||||||| || ||||||||||| Sbjct: 728 tcatcctcctcatcctcctcctcctcctcatcgtc 694 Score = 42.1 bits (21), Expect = 4.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 258 gctcatcctcctcatcatcctcatcgtct 286 ||||||||||||| ||||| ||||||||| Sbjct: 613 gctcatcctcctcttcatcatcatcgtct 585
>ref|XM_874028.1| PREDICTED: Bos taurus nucleolin, transcript variant 6 (NCL), mRNA Length = 2700 Score = 46.1 bits (23), Expect = 0.30 Identities = 32/35 (91%) Strand = Plus / Minus Query: 251 tcatcctgctcatcctcctcatcatcctcatcgtc 285 ||||||| |||||||||||| || ||||||||||| Sbjct: 728 tcatcctcctcatcctcctcctcctcctcatcgtc 694 Score = 42.1 bits (21), Expect = 4.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 258 gctcatcctcctcatcatcctcatcgtct 286 ||||||||||||| ||||| ||||||||| Sbjct: 613 gctcatcctcctcttcatcatcatcgtct 585
>ref|XM_873936.1| PREDICTED: Bos taurus nucleolin, transcript variant 5 (NCL), mRNA Length = 2576 Score = 46.1 bits (23), Expect = 0.30 Identities = 32/35 (91%) Strand = Plus / Minus Query: 251 tcatcctgctcatcctcctcatcatcctcatcgtc 285 ||||||| |||||||||||| || ||||||||||| Sbjct: 691 tcatcctcctcatcctcctcctcctcctcatcgtc 657 Score = 42.1 bits (21), Expect = 4.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 258 gctcatcctcctcatcatcctcatcgtct 286 ||||||||||||| ||||| ||||||||| Sbjct: 576 gctcatcctcctcttcatcatcatcgtct 548
>ref|XM_873838.1| PREDICTED: Bos taurus nucleolin, transcript variant 4 (NCL), mRNA Length = 2546 Score = 46.1 bits (23), Expect = 0.30 Identities = 32/35 (91%) Strand = Plus / Minus Query: 251 tcatcctgctcatcctcctcatcatcctcatcgtc 285 ||||||| |||||||||||| || ||||||||||| Sbjct: 691 tcatcctcctcatcctcctcctcctcctcatcgtc 657 Score = 42.1 bits (21), Expect = 4.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 258 gctcatcctcctcatcatcctcatcgtct 286 ||||||||||||| ||||| ||||||||| Sbjct: 576 gctcatcctcctcttcatcatcatcgtct 548
>ref|XM_873744.1| PREDICTED: Bos taurus nucleolin, transcript variant 3 (NCL), mRNA Length = 2489 Score = 46.1 bits (23), Expect = 0.30 Identities = 32/35 (91%) Strand = Plus / Minus Query: 251 tcatcctgctcatcctcctcatcatcctcatcgtc 285 ||||||| |||||||||||| || ||||||||||| Sbjct: 604 tcatcctcctcatcctcctcctcctcctcatcgtc 570
>ref|XM_873649.1| PREDICTED: Bos taurus nucleolin, transcript variant 2 (NCL), mRNA Length = 2456 Score = 46.1 bits (23), Expect = 0.30 Identities = 32/35 (91%) Strand = Plus / Minus Query: 251 tcatcctgctcatcctcctcatcatcctcatcgtc 285 ||||||| |||||||||||| || ||||||||||| Sbjct: 728 tcatcctcctcatcctcctcctcctcctcatcgtc 694 Score = 42.1 bits (21), Expect = 4.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 258 gctcatcctcctcatcatcctcatcgtct 286 ||||||||||||| ||||| ||||||||| Sbjct: 613 gctcatcctcctcttcatcatcatcgtct 585
>ref|XM_614626.2| PREDICTED: Bos taurus nucleolin, transcript variant 1 (NCL), mRNA Length = 2694 Score = 46.1 bits (23), Expect = 0.30 Identities = 32/35 (91%) Strand = Plus / Minus Query: 251 tcatcctgctcatcctcctcatcatcctcatcgtc 285 ||||||| |||||||||||| || ||||||||||| Sbjct: 728 tcatcctcctcatcctcctcctcctcctcatcgtc 694 Score = 42.1 bits (21), Expect = 4.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 258 gctcatcctcctcatcatcctcatcgtct 286 ||||||||||||| ||||| ||||||||| Sbjct: 613 gctcatcctcctcttcatcatcatcgtct 585
>gb|AC132833.10| Mus musculus chromosome 15, clone RP24-498G7, complete sequence Length = 154206 Score = 46.1 bits (23), Expect = 0.30 Identities = 23/23 (100%) Strand = Plus / Minus Query: 147 aagaagaaaaaagaggaggaaga 169 ||||||||||||||||||||||| Sbjct: 35020 aagaagaaaaaagaggaggaaga 34998
>gb|AY327500.1| Pan troglodytes killer-cell Ig-like receptor mRNA, partial cds Length = 1307 Score = 46.1 bits (23), Expect = 0.30 Identities = 26/27 (96%) Strand = Plus / Plus Query: 244 gtggccatcatcctgctcatcctcctc 270 |||||||||||||| |||||||||||| Sbjct: 978 gtggccatcatcctcctcatcctcctc 1004
>ref|XM_505055.1| Yarrowia lipolytica CLIB122, YALI0F05918g predicted mRNA Length = 1530 Score = 46.1 bits (23), Expect = 0.30 Identities = 32/35 (91%) Strand = Plus / Minus Query: 251 tcatcctgctcatcctcctcatcatcctcatcgtc 285 ||||||| ||||||||||||||| ||||| ||||| Sbjct: 200 tcatcctcctcatcctcctcatcctcctcttcgtc 166 Score = 42.1 bits (21), Expect = 4.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 254 tcctgctcatcctcctcatcatcctcatc 282 |||| ||||||||||||||| |||||||| Sbjct: 206 tcctcctcatcctcctcatcctcctcatc 178
>gb|AC165142.3| Mus musculus BAC clone RP24-484I1 from chromosome 7, complete sequence Length = 165049 Score = 46.1 bits (23), Expect = 0.30 Identities = 23/23 (100%) Strand = Plus / Plus Query: 150 aagaaaaaagaggaggaagaaga 172 ||||||||||||||||||||||| Sbjct: 76725 aagaaaaaagaggaggaagaaga 76747
>gb|AC133193.3| Mus musculus BAC clone RP23-396L1 from chromosome 2, complete sequence Length = 180931 Score = 46.1 bits (23), Expect = 0.30 Identities = 26/27 (96%) Strand = Plus / Minus Query: 146 gaagaagaaaaaagaggaggaagaaga 172 ||||||||||||||| ||||||||||| Sbjct: 100961 gaagaagaaaaaagaagaggaagaaga 100935
>gb|AC116718.21| Mus musculus chromosome 5, clone RP23-203O7, complete sequence Length = 204327 Score = 46.1 bits (23), Expect = 0.30 Identities = 26/27 (96%) Strand = Plus / Minus Query: 146 gaagaagaaaaaagaggaggaagaaga 172 ||||||||| ||||||||||||||||| Sbjct: 130954 gaagaagaagaaagaggaggaagaaga 130928
>gb|AC158235.3| Mus musculus BAC clone RP23-185P17 from chromosome 16, complete sequence Length = 198822 Score = 46.1 bits (23), Expect = 0.30 Identities = 26/27 (96%) Strand = Plus / Plus Query: 146 gaagaagaaaaaagaggaggaagaaga 172 ||||| ||||||||||||||||||||| Sbjct: 152511 gaagaggaaaaaagaggaggaagaaga 152537
>gb|AC160648.3| Pan troglodytes BAC clone CH251-568C23 from chromosome unknown, complete sequence Length = 205923 Score = 46.1 bits (23), Expect = 0.30 Identities = 26/27 (96%) Strand = Plus / Plus Query: 244 gtggccatcatcctgctcatcctcctc 270 |||||||||||||| |||||||||||| Sbjct: 172607 gtggccatcatcctcctcatcctcctc 172633
>gb|AC158565.2| Mus musculus chromosome 15, clone RP24-354O12, complete sequence Length = 150125 Score = 46.1 bits (23), Expect = 0.30 Identities = 23/23 (100%) Strand = Plus / Plus Query: 147 aagaagaaaaaagaggaggaaga 169 ||||||||||||||||||||||| Sbjct: 25254 aagaagaaaaaagaggaggaaga 25276
>gb|AC163355.2| Mus musculus BAC clone RP23-11P15 from chromosome 16, complete sequence Length = 225547 Score = 46.1 bits (23), Expect = 0.30 Identities = 26/27 (96%) Strand = Plus / Minus Query: 146 gaagaagaaaaaagaggaggaagaaga 172 ||||||||| ||||||||||||||||| Sbjct: 67686 gaagaagaagaaagaggaggaagaaga 67660
>ref|NM_063823.2| Caenorhabditis elegans C07E3.2 (C07E3.2) mRNA, complete cds Length = 2307 Score = 46.1 bits (23), Expect = 0.30 Identities = 23/23 (100%) Strand = Plus / Minus Query: 260 tcatcctcctcatcatcctcatc 282 ||||||||||||||||||||||| Sbjct: 388 tcatcctcctcatcatcctcatc 366
>emb|Z49908.1|CEC07E3 Caenorhabditis elegans Cosmid C07E3, complete sequence Length = 43815 Score = 46.1 bits (23), Expect = 0.30 Identities = 23/23 (100%) Strand = Plus / Plus Query: 260 tcatcctcctcatcatcctcatc 282 ||||||||||||||||||||||| Sbjct: 1775 tcatcctcctcatcatcctcatc 1797
>emb|AL591378.2| Human DNA sequence from clone RP11-64P15 on chromosome X Contains the 5' end of a novel gene and a CpG island, complete sequence Length = 166016 Score = 46.1 bits (23), Expect = 0.30 Identities = 26/27 (96%) Strand = Plus / Plus Query: 146 gaagaagaaaaaagaggaggaagaaga 172 |||||||||||| |||||||||||||| Sbjct: 46768 gaagaagaaaaaggaggaggaagaaga 46794
>emb|AL390777.13| Human DNA sequence from clone RP11-301F14 on chromosome 9 Contains the 5' end of the NTRK2 gene for Neurotrophic tyrosine kinase, receptor, type 2 (TRKB) and a CpG island, complete sequence Length = 182914 Score = 46.1 bits (23), Expect = 0.30 Identities = 26/27 (96%) Strand = Plus / Minus Query: 146 gaagaagaaaaaagaggaggaagaaga 172 |||||||||| |||||||||||||||| Sbjct: 78886 gaagaagaaagaagaggaggaagaaga 78860
>emb|AL356421.10| Human DNA sequence from clone RP11-550C4 on chromosome 6 Contains the 3' end of the CD2AP gene for CD2-associated protein, the GPR111 gene for G protein-coupled receptor 111, the GPR115 gene for G protein-coupled receptor 115, the 5' end of a gene for novel protein similar to seven transmembrane receptor (Rhodopsin family), a novel gene and a ribosomal protein 27A (RPL27A) pseudogene, complete sequence Length = 170532 Score = 46.1 bits (23), Expect = 0.30 Identities = 23/23 (100%) Strand = Plus / Minus Query: 835 aatccagagcccttctggttctg 857 ||||||||||||||||||||||| Sbjct: 9261 aatccagagcccttctggttctg 9239
>emb|AL138894.11| Human DNA sequence from clone RP11-28O4 on chromosome 9 Contains the 5' end of the DBCCR1 gene for deleted in bladder cancer chromosome region candidate 1 (IB3089A) and a CpG island, complete sequence Length = 152366 Score = 46.1 bits (23), Expect = 0.30 Identities = 26/27 (96%) Strand = Plus / Plus Query: 146 gaagaagaaaaaagaggaggaagaaga 172 ||||||||||||||||||||| ||||| Sbjct: 1093 gaagaagaaaaaagaggaggatgaaga 1119
>gb|AC158955.2| Mus musculus chromosome 15, clone RP23-22C17, complete sequence Length = 256999 Score = 46.1 bits (23), Expect = 0.30 Identities = 26/27 (96%) Strand = Plus / Plus Query: 146 gaagaagaaaaaagaggaggaagaaga 172 ||||||||||||||||||||| ||||| Sbjct: 202081 gaagaagaaaaaagaggaggaggaaga 202107
>emb|AL161505.2|ATCHRIV17 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 17 Length = 198176 Score = 46.1 bits (23), Expect = 0.30 Identities = 23/23 (100%) Strand = Plus / Minus Query: 157 aagaggaggaagaagatgtcgat 179 ||||||||||||||||||||||| Sbjct: 163807 aagaggaggaagaagatgtcgat 163785
>emb|AL732607.9| Mouse DNA sequence from clone RP23-16B24 on chromosome 11 Contains a novel pseudogene, two novel genes and a methionine aminopeptidase 2 (Metap2) pseudogene, complete sequence Length = 66800 Score = 46.1 bits (23), Expect = 0.30 Identities = 26/27 (96%) Strand = Plus / Minus Query: 146 gaagaagaaaaaagaggaggaagaaga 172 ||||||||||||||| ||||||||||| Sbjct: 58593 gaagaagaaaaaagaagaggaagaaga 58567
>emb|BX908384.15| Zebrafish DNA sequence from clone DKEY-38K3 in linkage group 13, complete sequence Length = 213699 Score = 46.1 bits (23), Expect = 0.30 Identities = 23/23 (100%) Strand = Plus / Plus Query: 260 tcatcctcctcatcatcctcatc 282 ||||||||||||||||||||||| Sbjct: 211551 tcatcctcctcatcatcctcatc 211573
>gb|AC120373.10| Mus musculus chromosome 15, clone RP24-512O2, complete sequence Length = 159741 Score = 46.1 bits (23), Expect = 0.30 Identities = 26/27 (96%) Strand = Plus / Minus Query: 146 gaagaagaaaaaagaggaggaagaaga 172 ||||||||||||||||||||| ||||| Sbjct: 117363 gaagaagaaaaaagaggaggaggaaga 117337
>gb|AC116984.2| Dictyostelium discoideum chromosome 2 map 2567470-3108875 strain AX4, complete sequence Length = 541399 Score = 46.1 bits (23), Expect = 0.30 Identities = 23/23 (100%) Strand = Plus / Minus Query: 260 tcatcctcctcatcatcctcatc 282 ||||||||||||||||||||||| Sbjct: 283272 tcatcctcctcatcatcctcatc 283250
>gb|AC024901.29| Homo sapiens 12 BAC RP11-684M17 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 129638 Score = 46.1 bits (23), Expect = 0.30 Identities = 26/27 (96%) Strand = Plus / Minus Query: 146 gaagaagaaaaaagaggaggaagaaga 172 ||||||||||||||||||||| ||||| Sbjct: 94336 gaagaagaaaaaagaggaggaggaaga 94310
>gb|AF147262.1|F28D6 Arabidopsis thaliana BAC F28D6 Length = 112629 Score = 46.1 bits (23), Expect = 0.30 Identities = 23/23 (100%) Strand = Plus / Minus Query: 157 aagaggaggaagaagatgtcgat 179 ||||||||||||||||||||||| Sbjct: 100715 aagaggaggaagaagatgtcgat 100693
>emb|BX284624.4| Mouse DNA sequence from clone RP23-299A2 on chromosome 2, complete sequence Length = 209836 Score = 46.1 bits (23), Expect = 0.30 Identities = 26/27 (96%) Strand = Plus / Plus Query: 146 gaagaagaaaaaagaggaggaagaaga 172 ||||||||||||||| ||||||||||| Sbjct: 151930 gaagaagaaaaaagaagaggaagaaga 151956
>emb|AL591067.35| Mouse DNA sequence from clone RP23-333D2 on chromosome 11, complete sequence Length = 196512 Score = 46.1 bits (23), Expect = 0.30 Identities = 26/27 (96%) Strand = Plus / Minus Query: 146 gaagaagaaaaaagaggaggaagaaga 172 ||||||||||||||||||||| ||||| Sbjct: 5484 gaagaagaaaaaagaggaggaggaaga 5458
>gb|AC165956.4| Mus musculus BAC clone RP23-437I5 from chromosome 13, complete sequence Length = 211774 Score = 46.1 bits (23), Expect = 0.30 Identities = 26/27 (96%) Strand = Plus / Plus Query: 146 gaagaagaaaaaagaggaggaagaaga 172 |||||||||||||||||||| |||||| Sbjct: 115704 gaagaagaaaaaagaggagggagaaga 115730
>emb|CR382132.1| Yarrowia lipolytica chromosome F of strain CLIB122 of Yarrowia lipolytica Length = 4003362 Score = 46.1 bits (23), Expect = 0.30 Identities = 32/35 (91%) Strand = Plus / Minus Query: 251 tcatcctgctcatcctcctcatcatcctcatcgtc 285 ||||||| ||||||||||||||| ||||| ||||| Sbjct: 875807 tcatcctcctcatcctcctcatcctcctcttcgtc 875773 Score = 42.1 bits (21), Expect = 4.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 254 tcctgctcatcctcctcatcatcctcatc 282 |||| ||||||||||||||| |||||||| Sbjct: 875813 tcctcctcatcctcctcatcctcctcatc 875785 Score = 42.1 bits (21), Expect = 4.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 258 gctcatcctcctcatcatcctcatc 282 ||||||||||||||||||| ||||| Sbjct: 2808172 gctcatcctcctcatcatcatcatc 2808196
>emb|AL772333.5| Mouse DNA sequence from clone RP23-305E1 on chromosome 1, complete sequence Length = 142174 Score = 46.1 bits (23), Expect = 0.30 Identities = 26/27 (96%) Strand = Plus / Minus Query: 146 gaagaagaaaaaagaggaggaagaaga 172 ||||||||| ||||||||||||||||| Sbjct: 27083 gaagaagaagaaagaggaggaagaaga 27057
>gb|AC115744.9| Mus musculus chromosome 12, clone RP23-479M19, complete sequence Length = 211776 Score = 46.1 bits (23), Expect = 0.30 Identities = 26/27 (96%) Strand = Plus / Minus Query: 146 gaagaagaaaaaagaggaggaagaaga 172 |||||||||| |||||||||||||||| Sbjct: 36941 gaagaagaaagaagaggaggaagaaga 36915
>gb|DQ367034.1| Nicholsicypris normalis recombination activating protein 2 (rag2) gene, partial cds Length = 1212 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 260 tcatcctcctcatcatcctcat 281 |||||||||||||||||||||| Sbjct: 1055 tcatcctcctcatcatcctcat 1034
>gb|DQ366958.1| Discogobio brachyphysallidos recombination activating protein 2 (rag2) gene, partial cds Length = 1254 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 260 tcatcctcctcatcatcctcat 281 |||||||||||||||||||||| Sbjct: 1073 tcatcctcctcatcatcctcat 1052
>gb|DQ366949.1| Discogobio laticeps recombination activating protein 2 (rag2) gene, partial cds Length = 1254 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 260 tcatcctcctcatcatcctcat 281 |||||||||||||||||||||| Sbjct: 1073 tcatcctcctcatcatcctcat 1052
>gb|DQ366947.1| Discogobio bismargaritus recombination activating protein 2 (rag2) gene, partial cds Length = 1236 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 260 tcatcctcctcatcatcctcat 281 |||||||||||||||||||||| Sbjct: 1073 tcatcctcctcatcatcctcat 1052
>emb|CT027699.14| Zebrafish DNA sequence from clone DKEY-184E21 in linkage group 17, complete sequence Length = 112202 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1052 tatctatacatgtatttgtttt 1073 |||||||||||||||||||||| Sbjct: 62160 tatctatacatgtatttgtttt 62139
>ref|XM_001180423.1| PREDICTED: Strongylocentrotus purpuratus similar to diacylglycerol kinase eta (LOC758126), mRNA Length = 783 Score = 44.1 bits (22), Expect = 1.2 Identities = 31/34 (91%) Strand = Plus / Minus Query: 249 catcatcctgctcatcctcctcatcatcctcatc 282 ||||||| | |||||| ||||||||||||||||| Sbjct: 433 catcatcatcctcatcatcctcatcatcctcatc 400
>ref|XM_001199263.1| PREDICTED: Strongylocentrotus purpuratus similar to diacylglycerol kinase eta (LOC763332), mRNA Length = 783 Score = 44.1 bits (22), Expect = 1.2 Identities = 31/34 (91%) Strand = Plus / Minus Query: 249 catcatcctgctcatcctcctcatcatcctcatc 282 ||||||| | |||||| ||||||||||||||||| Sbjct: 433 catcatcatcctcatcatcctcatcatcctcatc 400
>ref|NM_001072331.1| Oryza sativa (japonica cultivar-group) Os11g0157200 (Os11g0157200) mRNA, complete cds Length = 1025 Score = 44.1 bits (22), Expect = 1.2 Identities = 28/30 (93%) Strand = Plus / Plus Query: 277 ctcatcgtctggctcgtgctccgccccacc 306 |||||||||| |||||||||||||||||| Sbjct: 279 ctcatcgtctacctcgtgctccgccccacc 308
>gb|AE014298.4| Drosophila melanogaster chromosome X, complete sequence Length = 22422827 Score = 44.1 bits (22), Expect = 1.2 Identities = 31/34 (91%) Strand = Plus / Plus Query: 249 catcatcctgctcatcctcctcatcatcctcatc 282 ||||||| | |||||||||||||||||| ||||| Sbjct: 3594324 catcatcgtcctcatcctcctcatcatcatcatc 3594357
>gb|AE014297.2| Drosophila melanogaster chromosome 3R, complete sequence Length = 27905053 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 258 gctcatcctcctcatcatcctc 279 |||||||||||||||||||||| Sbjct: 15382116 gctcatcctcctcatcatcctc 15382137 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 747 cggctccatcgccggcggcggc 768 |||||||||||||||||||||| Sbjct: 20481195 cggctccatcgccggcggcggc 20481174
>emb|CT573213.2| Frankia alni str. ACN14A chromosome, complete sequence Length = 7497934 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 288 gctcgtgctccgccccaccagg 309 |||||||||||||||||||||| Sbjct: 2212604 gctcgtgctccgccccaccagg 2212583 Score = 42.1 bits (21), Expect = 4.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 20 cggccacatcgggctgcgcgg 40 ||||||||||||||||||||| Sbjct: 7227090 cggccacatcgggctgcgcgg 7227070
>emb|CR974585.16| Mouse DNA sequence from clone RP23-107N10 on chromosome 12, complete sequence Length = 177782 Score = 44.1 bits (22), Expect = 1.2 Identities = 31/34 (91%) Strand = Plus / Plus Query: 249 catcatcctgctcatcctcctcatcatcctcatc 282 ||||||||| ||| |||||||||||||| ||||| Sbjct: 45589 catcatcctcctcctcctcctcatcatcatcatc 45622 Score = 44.1 bits (22), Expect = 1.2 Identities = 31/34 (91%) Strand = Plus / Plus Query: 249 catcatcctgctcatcctcctcatcatcctcatc 282 ||||||||| || |||||||||||||||||||| Sbjct: 45699 catcatcctcatcctcctcctcatcatcctcatc 45732 Score = 44.1 bits (22), Expect = 1.2 Identities = 31/34 (91%) Strand = Plus / Plus Query: 249 catcatcctgctcatcctcctcatcatcctcatc 282 ||||||||| |||||||||||| ||||| ||||| Sbjct: 45917 catcatcctcctcatcctcctcctcatcatcatc 45950 Score = 44.1 bits (22), Expect = 1.2 Identities = 25/26 (96%) Strand = Plus / Plus Query: 251 tcatcctgctcatcctcctcatcatc 276 ||||||| |||||||||||||||||| Sbjct: 46491 tcatcctcctcatcctcctcatcatc 46516 Score = 42.1 bits (21), Expect = 4.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 254 tcctgctcatcctcctcatcatcctcatc 282 |||| ||||||||||||||| |||||||| Sbjct: 46485 tcctcctcatcctcctcatcctcctcatc 46513
>gb|AC188310.1| Taeniopygia guttata chromosome UNK clone TG_Ba-280G18, complete sequence Length = 154503 Score = 44.1 bits (22), Expect = 1.2 Identities = 31/34 (91%) Strand = Plus / Plus Query: 249 catcatcctgctcatcctcctcatcatcctcatc 282 ||||||||| ||| |||||||||||||| ||||| Sbjct: 107111 catcatcctcctcctcctcctcatcatcatcatc 107144
>ref|XM_001081580.1| PREDICTED: Rattus norvegicus hypothetical protein LOC688234 (LOC688234), mRNA Length = 390 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 151 agaaaaaagaggaggaagaaga 172 |||||||||||||||||||||| Sbjct: 227 agaaaaaagaggaggaagaaga 248
>ref|XM_001005436.1| PREDICTED: Mus musculus similar to Nucleophosmin (NPM) (Nucleolar phosphoprotein B23) (Numatrin) (Nucleolar protein NO38) (LOC620421), mRNA Length = 1266 Score = 44.1 bits (22), Expect = 1.2 Identities = 31/34 (91%) Strand = Plus / Minus Query: 249 catcatcctgctcatcctcctcatcatcctcatc 282 ||||||||| ||| |||||||||||||| ||||| Sbjct: 608 catcatcctcctcctcctcctcatcatcttcatc 575
>gb|BC090842.1| Mus musculus cDNA clone IMAGE:5710461, **** WARNING: chimeric clone **** Length = 2250 Score = 44.1 bits (22), Expect = 1.2 Identities = 25/26 (96%) Strand = Plus / Minus Query: 260 tcatcctcctcatcatcctcatcgtc 285 ||||| |||||||||||||||||||| Sbjct: 611 tcatcatcctcatcatcctcatcgtc 586
>ref|XM_632862.1| Dictyostelium discoideum AX4 hypothetical protein (DDBDRAFT_0218769) mRNA, complete cds Length = 675 Score = 44.1 bits (22), Expect = 1.2 Identities = 31/34 (91%) Strand = Plus / Plus Query: 249 catcatcctgctcatcctcctcatcatcctcatc 282 ||||||||| |||||||| |||||||||||||| Sbjct: 566 catcatcctcttcatcctcttcatcatcctcatc 599
>ref|XM_638940.1| Dictyostelium discoideum AX4 hypothetical protein (DDBDRAFT_0167791) mRNA, complete cds Length = 702 Score = 44.1 bits (22), Expect = 1.2 Identities = 31/34 (91%) Strand = Plus / Plus Query: 249 catcatcctgctcatcctcctcatcatcctcatc 282 ||||||||| |||||||| |||||||||||||| Sbjct: 283 catcatcctcatcatcctcatcatcatcctcatc 316
>gb|AC154044.2| Drosophila melanogaster clone BACR32E02, complete sequence Length = 186002 Score = 44.1 bits (22), Expect = 1.2 Identities = 31/34 (91%) Strand = Plus / Minus Query: 249 catcatcctgctcatcctcctcatcatcctcatc 282 ||||||| | |||||||||||||||||| ||||| Sbjct: 42626 catcatcgtcctcatcctcctcatcatcatcatc 42593
>gb|AY713945.1| Gasterosteus aculeatus MHC class II antigen gene cluster, complete sequence Length = 99318 Score = 44.1 bits (22), Expect = 1.2 Identities = 31/34 (91%) Strand = Plus / Plus Query: 249 catcatcctgctcatcctcctcatcatcctcatc 282 |||||||| |||||||||||||||||| ||||| Sbjct: 5290 catcatccccctcatcctcctcatcatcatcatc 5323
>gb|AC134048.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0076K20, complete sequence Length = 127338 Score = 44.1 bits (22), Expect = 1.2 Identities = 28/30 (93%) Strand = Plus / Plus Query: 277 ctcatcgtctggctcgtgctccgccccacc 306 |||||||||| |||||||||||||||||| Sbjct: 4803 ctcatcgtctacctcgtgctccgccccacc 4832
>gb|BC085278.1| Mus musculus nucleophosmin 1, mRNA (cDNA clone MGC:103199 IMAGE:30438901), complete cds Length = 1258 Score = 44.1 bits (22), Expect = 1.2 Identities = 25/26 (96%) Strand = Plus / Minus Query: 260 tcatcctcctcatcatcctcatcgtc 285 ||||| |||||||||||||||||||| Sbjct: 585 tcatcatcctcatcatcctcatcgtc 560
>gb|BT019028.1| Zea mays clone Contig534.F mRNA sequence Length = 1159 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 151 agaaaaaagaggaggaagaaga 172 |||||||||||||||||||||| Sbjct: 435 agaaaaaagaggaggaagaaga 456
>gb|AC133217.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0052H02, complete sequence Length = 159632 Score = 44.1 bits (22), Expect = 1.2 Identities = 28/30 (93%) Strand = Plus / Minus Query: 277 ctcatcgtctggctcgtgctccgccccacc 306 |||||||||| |||||||||||||||||| Sbjct: 1802 ctcatcgtctacctcgtgctccgccccacc 1773
>gb|BC054755.1| Mus musculus nucleophosmin 1, mRNA (cDNA clone MGC:64789 IMAGE:6411700), complete cds Length = 1281 Score = 44.1 bits (22), Expect = 1.2 Identities = 25/26 (96%) Strand = Plus / Minus Query: 260 tcatcctcctcatcatcctcatcgtc 285 ||||| |||||||||||||||||||| Sbjct: 607 tcatcatcctcatcatcctcatcgtc 582
>ref|XM_705535.1| Candida albicans SC5314 mitochondrial ribosomal large subunit protein MRP51p (CaO19.7816), mRNA Length = 1116 Score = 44.1 bits (22), Expect = 1.2 Identities = 31/34 (91%) Strand = Plus / Plus Query: 249 catcatcctgctcatcctcctcatcatcctcatc 282 ||||||||| ||| |||||||||||||| ||||| Sbjct: 512 catcatcctcctcctcctcctcatcatcatcatc 545
>ref|NM_001078179.1| Taeniopygia guttata chromo-helicase DNA-binding protein (CHD1Z), mRNA gb|AY217131.1| Taeniopygia guttata chromo-helicase DNA-binding protein (CHD1Z) mRNA, complete cds Length = 6951 Score = 44.1 bits (22), Expect = 1.2 Identities = 31/34 (91%) Strand = Plus / Minus Query: 249 catcatcctgctcatcctcctcatcatcctcatc 282 ||||||||| ||| |||||||||||||| ||||| Sbjct: 832 catcatcctcctcctcctcctcatcatcatcatc 799
>ref|NM_206565.1| Drosophila melanogaster CG6695-RB, transcript variant B (CG6695), mRNA Length = 3127 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 747 cggctccatcgccggcggcggc 768 |||||||||||||||||||||| Sbjct: 312 cggctccatcgccggcggcggc 291
>ref|NM_166984.1| Drosophila melanogaster Mnt CG13316-RC, transcript variant C (Mnt), mRNA Length = 2585 Score = 44.1 bits (22), Expect = 1.2 Identities = 31/34 (91%) Strand = Plus / Plus Query: 249 catcatcctgctcatcctcctcatcatcctcatc 282 ||||||| | |||||||||||||||||| ||||| Sbjct: 2296 catcatcgtcctcatcctcctcatcatcatcatc 2329
>ref|NM_166983.1| Drosophila melanogaster Mnt CG13316-RA, transcript variant A (Mnt), mRNA Length = 2444 Score = 44.1 bits (22), Expect = 1.2 Identities = 31/34 (91%) Strand = Plus / Plus Query: 249 catcatcctgctcatcctcctcatcatcctcatc 282 ||||||| | |||||||||||||||||| ||||| Sbjct: 2155 catcatcgtcctcatcctcctcatcatcatcatc 2188
>ref|NM_143019.2| Drosophila melanogaster CG6695-RA, transcript variant A (CG6695), mRNA Length = 3168 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 747 cggctccatcgccggcggcggc 768 |||||||||||||||||||||| Sbjct: 312 cggctccatcgccggcggcggc 291
>gb|AY344225.1| Candida glabrata Epa5p (EPA5) and Epa4p (EPA4) genes, complete cds Length = 27514 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 258 gctcatcctcctcatcatcctc 279 |||||||||||||||||||||| Sbjct: 10282 gctcatcctcctcatcatcctc 10261 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 258 gctcatcctcctcatcatcctc 279 |||||||||||||||||||||| Sbjct: 10495 gctcatcctcctcatcatcctc 10474 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 258 gctcatcctcctcatcatcctc 279 |||||||||||||||||||||| Sbjct: 20256 gctcatcctcctcatcatcctc 20277 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 258 gctcatcctcctcatcatcctc 279 |||||||||||||||||||||| Sbjct: 20370 gctcatcctcctcatcatcctc 20391
>gb|AF016672.3| Caenorhabditis elegans cosmid F56D12, complete sequence Length = 44036 Score = 44.1 bits (22), Expect = 1.2 Identities = 25/26 (96%) Strand = Plus / Minus Query: 261 catcctcctcatcatcctcatcgtct 286 ||||||||||||| |||||||||||| Sbjct: 25126 catcctcctcatcttcctcatcgtct 25101
>ref|NM_130715.2| Drosophila melanogaster Mnt CG13316-RB, transcript variant B (Mnt), mRNA Length = 1828 Score = 44.1 bits (22), Expect = 1.2 Identities = 31/34 (91%) Strand = Plus / Plus Query: 249 catcatcctgctcatcctcctcatcatcctcatc 282 ||||||| | |||||||||||||||||| ||||| Sbjct: 1544 catcatcgtcctcatcctcctcatcatcatcatc 1577
>gb|AC113595.11| Mus musculus chromosome 15, clone RP23-373B5, complete sequence Length = 235814 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 150 aagaaaaaagaggaggaagaag 171 |||||||||||||||||||||| Sbjct: 92772 aagaaaaaagaggaggaagaag 92793
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 131 gaacagcaggagcacgaagaag 152 |||||||||||||||||||||| Sbjct: 1182304 gaacagcaggagcacgaagaag 1182325
>dbj|AK135517.1| Mus musculus 12 days embryo female mullerian duct includes surrounding region cDNA, RIKEN full-length enriched library, clone:6820441K12 product:nucleophosmin 1, full insert sequence Length = 1281 Score = 44.1 bits (22), Expect = 1.2 Identities = 25/26 (96%) Strand = Plus / Minus Query: 260 tcatcctcctcatcatcctcatcgtc 285 ||||| |||||||||||||||||||| Sbjct: 625 tcatcatcctcatcatcctcatcgtc 600
>dbj|AK145124.1| Mus musculus mammary gland RCB-0526 Jyg-MC(A) cDNA, RIKEN full-length enriched library, clone:G830048F21 product:nucleophosmin 1, full insert sequence Length = 1282 Score = 44.1 bits (22), Expect = 1.2 Identities = 31/34 (91%) Strand = Plus / Minus Query: 249 catcatcctgctcatcctcctcatcatcctcatc 282 ||||||| | |||||| ||||||||||||||||| Sbjct: 626 catcatcatcctcatcatcctcatcatcctcatc 593
>dbj|AK153901.1| Mus musculus 2 days neonate thymus thymic cells cDNA, RIKEN full-length enriched library, clone:E430004C03 product:nucleophosmin 1, full insert sequence Length = 1283 Score = 44.1 bits (22), Expect = 1.2 Identities = 31/34 (91%) Strand = Plus / Minus Query: 249 catcatcctgctcatcctcctcatcatcctcatc 282 ||||||| | |||||| ||||||||||||||||| Sbjct: 627 catcatcatcctcatcatcctcatcatcctcatc 594
>dbj|AK145813.1| Mus musculus blastocyst blastocyst cDNA, RIKEN full-length enriched library, clone:I1C0050D07 product:nucleophosmin 1, full insert sequence Length = 1280 Score = 44.1 bits (22), Expect = 1.2 Identities = 25/26 (96%) Strand = Plus / Minus Query: 260 tcatcctcctcatcatcctcatcgtc 285 ||||| |||||||||||||||||||| Sbjct: 625 tcatcatcctcatcatcctcatcgtc 600
>dbj|AK150164.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:G530141B10 product:nucleophosmin 1, full insert sequence Length = 697 Score = 44.1 bits (22), Expect = 1.2 Identities = 25/26 (96%) Strand = Plus / Minus Query: 260 tcatcctcctcatcatcctcatcgtc 285 ||||| |||||||||||||||||||| Sbjct: 624 tcatcatcctcatcatcctcatcgtc 599
>dbj|AK165860.1| Mus musculus lung RCB-0558 LLC cDNA, RIKEN full-length enriched library, clone:G730008D22 product:nucleophosmin 1, full insert sequence Length = 1276 Score = 44.1 bits (22), Expect = 1.2 Identities = 25/26 (96%) Strand = Plus / Minus Query: 260 tcatcctcctcatcatcctcatcgtc 285 ||||| |||||||||||||||||||| Sbjct: 626 tcatcatcctcatcatcctcatcgtc 601
>dbj|AK029681.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched library, clone:4930465J06 product:hypothetical protein, full insert sequence Length = 3083 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 259 ctcatcctcctcatcatcctca 280 |||||||||||||||||||||| Sbjct: 263 ctcatcctcctcatcatcctca 242
>dbj|AK088923.1| Mus musculus 2 days neonate thymus thymic cells cDNA, RIKEN full-length enriched library, clone:E430031K14 product:nucleophosmin 1, full insert sequence Length = 1159 Score = 44.1 bits (22), Expect = 1.2 Identities = 31/34 (91%) Strand = Plus / Minus Query: 249 catcatcctgctcatcctcctcatcatcctcatc 282 ||||||| | |||||| ||||||||||||||||| Sbjct: 626 catcatcatcctcatcatcctcatcatcctcatc 593
>gb|AY118441.1| Drosophila melanogaster SD06668 full insert cDNA Length = 3162 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 747 cggctccatcgccggcggcggc 768 |||||||||||||||||||||| Sbjct: 252 cggctccatcgccggcggcggc 231
>ref|NM_001038241.1| Caenorhabditis elegans JNK Interacting Protein (scaffold protein) family member (jip-1) (jip-1) mRNA, complete cds Length = 3080 Score = 44.1 bits (22), Expect = 1.2 Identities = 25/26 (96%) Strand = Plus / Minus Query: 261 catcctcctcatcatcctcatcgtct 286 ||||||||||||| |||||||||||| Sbjct: 1084 catcctcctcatcttcctcatcgtct 1059
>emb|AJ296686.1|PAB296686 Picea abies ATC microsatellite DNA, clone EATC1A02 Length = 421 Score = 44.1 bits (22), Expect = 1.2 Identities = 25/26 (96%) Strand = Plus / Plus Query: 260 tcatcctcctcatcatcctcatcgtc 285 ||||||||||||||||| |||||||| Sbjct: 296 tcatcctcctcatcatcatcatcgtc 321
>dbj|AK005498.1| Mus musculus adult female placenta cDNA, RIKEN full-length enriched library, clone:1600019K04 product:nucleophosmin 1, full insert sequence Length = 966 Score = 44.1 bits (22), Expect = 1.2 Identities = 25/26 (96%) Strand = Plus / Minus Query: 260 tcatcctcctcatcatcctcatcgtc 285 ||||| |||||||||||||||||||| Sbjct: 624 tcatcatcctcatcatcctcatcgtc 599
>dbj|AK005420.1| Mus musculus adult female placenta cDNA, RIKEN full-length enriched library, clone:1600012A15 product:nucleophosmin 1, full insert sequence Length = 1157 Score = 44.1 bits (22), Expect = 1.2 Identities = 25/26 (96%) Strand = Plus / Minus Query: 260 tcatcctcctcatcatcctcatcgtc 285 ||||| |||||||||||||||||||| Sbjct: 625 tcatcatcctcatcatcctcatcgtc 600
>dbj|AK028370.1| Mus musculus 18 days pregnant adult female placenta and extra embryonic tissue cDNA, RIKEN full-length enriched library, clone:3830425O06 product:nucleophosmin 1, full insert sequence Length = 775 Score = 44.1 bits (22), Expect = 1.2 Identities = 25/26 (96%) Strand = Plus / Minus Query: 260 tcatcctcctcatcatcctcatcgtc 285 ||||| |||||||||||||||||||| Sbjct: 624 tcatcatcctcatcatcctcatcgtc 599
>dbj|AK028253.1| Mus musculus 12 days embryo head cDNA, RIKEN full-length enriched library, clone:3010003I05 product:nucleophosmin 1, full insert sequence Length = 1280 Score = 44.1 bits (22), Expect = 1.2 Identities = 25/26 (96%) Strand = Plus / Minus Query: 260 tcatcctcctcatcatcctcatcgtc 285 ||||| |||||||||||||||||||| Sbjct: 625 tcatcatcctcatcatcctcatcgtc 600
>emb|CR706630.2|CNS0G86Q Tetraodon nigroviridis full-length cDNA Length = 439 Score = 44.1 bits (22), Expect = 1.2 Identities = 25/26 (96%) Strand = Plus / Plus Query: 260 tcatcctcctcatcatcctcatcgtc 285 |||||||||||| ||||||||||||| Sbjct: 49 tcatcctcctcaacatcctcatcgtc 74
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11 Length = 28386948 Score = 44.1 bits (22), Expect = 1.2 Identities = 28/30 (93%) Strand = Plus / Minus Query: 277 ctcatcgtctggctcgtgctccgccccacc 306 |||||||||| |||||||||||||||||| Sbjct: 2721995 ctcatcgtctacctcgtgctccgccccacc 2721966 Score = 42.1 bits (21), Expect = 4.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 152 gaaaaaagaggaggaagaaga 172 ||||||||||||||||||||| Sbjct: 18106538 gaaaaaagaggaggaagaaga 18106518
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6 Length = 30731886 Score = 44.1 bits (22), Expect = 1.2 Identities = 25/26 (96%) Strand = Plus / Plus Query: 260 tcatcctcctcatcatcctcatcgtc 285 ||||| |||||||||||||||||||| Sbjct: 12236094 tcatcatcctcatcatcctcatcgtc 12236119
>gb|AY075354.1| Drosophila melanogaster GH28809 full length cDNA Length = 2350 Score = 44.1 bits (22), Expect = 1.2 Identities = 31/34 (91%) Strand = Plus / Plus Query: 249 catcatcctgctcatcctcctcatcatcctcatc 282 ||||||| | |||||||||||||||||| ||||| Sbjct: 2047 catcatcgtcctcatcctcctcatcatcatcatc 2080
>emb|Z93021.2|HS516C23 Human DNA sequence from clone RP3-516C23 on chromosome 6q12 Contains the 5' end of the KHDRBS2 gene for KH domain containing RNA binding signal transduction associated protein 2, complete sequence Length = 116685 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1058 tacatgtatttgtttttagaga 1079 |||||||||||||||||||||| Sbjct: 79621 tacatgtatttgtttttagaga 79642
>emb|AL138881.12| Human DNA sequence from clone RP11-528H16 on chromosome 6 Contains the 5' end of a putative novel gene, complete sequence Length = 38809 Score = 44.1 bits (22), Expect = 1.2 Identities = 25/26 (96%) Strand = Plus / Minus Query: 249 catcatcctgctcatcctcctcatca 274 ||||||||| |||||||||||||||| Sbjct: 9942 catcatcctcctcatcctcctcatca 9917
>gb|AY804072.1| Exodon paradoxus voucher AMNH233426 recombination activating gene 2 (RAG2) gene, partial cds Length = 1211 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 260 tcatcctcctcatcatcctcat 281 |||||||||||||||||||||| Sbjct: 1070 tcatcctcctcatcatcctcat 1049
>gb|AY804058.1| Cheirodontops sp. AMNH233215 recombination activating gene 2 (RAG2) gene, partial cds Length = 1222 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 260 tcatcctcctcatcatcctcat 281 |||||||||||||||||||||| Sbjct: 1068 tcatcctcctcatcatcctcat 1047
>emb|Z98254.1|DMC114E2 Drosophila melanogaster cosmid 114E2 Length = 37467 Score = 44.1 bits (22), Expect = 1.2 Identities = 31/34 (91%) Strand = Plus / Minus Query: 249 catcatcctgctcatcctcctcatcatcctcatc 282 ||||||| | |||||||||||||||||| ||||| Sbjct: 5921 catcatcgtcctcatcctcctcatcatcatcatc 5888
>emb|BX640446.1| Bordetella bronchiseptica strain RB50, complete genome; segment 10/16 Length = 348642 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 581 acctggcggtggcgctggcgca 602 |||||||||||||||||||||| Sbjct: 128727 acctggcggtggcgctggcgca 128706
>emb|BX640432.1| Bordetella parapertussis strain 12822, complete genome; segment 10/14 Length = 346301 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 581 acctggcggtggcgctggcgca 602 |||||||||||||||||||||| Sbjct: 201734 acctggcggtggcgctggcgca 201713
>emb|BX640419.1| Bordetella pertussis strain Tohama I, complete genome; segment 9/12 Length = 349672 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 581 acctggcggtggcgctggcgca 602 |||||||||||||||||||||| Sbjct: 16330 acctggcggtggcgctggcgca 16309
>emb|AL929352.1|PFA929352 Plasmodium falciparum strain 3D7, chromosome 5, segment 2/4 Length = 313050 Score = 44.1 bits (22), Expect = 1.2 Identities = 31/34 (91%) Strand = Plus / Minus Query: 249 catcatcctgctcatcctcctcatcatcctcatc 282 ||||||||| |||||||| |||||||||||||| Sbjct: 164614 catcatcctcatcatcctcatcatcatcctcatc 164581
>emb|AL807371.1|NC5F3 Neurospora crassa DNA linkage group V cosmid contig 5F3 Length = 83192 Score = 44.1 bits (22), Expect = 1.2 Identities = 28/30 (93%) Strand = Plus / Plus Query: 251 tcatcctgctcatcctcctcatcatcctca 280 |||||| ||||||| ||||||||||||||| Sbjct: 29997 tcatccagctcatcttcctcatcatcctca 30026
>emb|AL607152.21| Mouse DNA sequence from clone RP23-198N14 on chromosome 11, complete sequence Length = 232408 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 152 gaaaaaagaggaggaagaagat 173 |||||||||||||||||||||| Sbjct: 184708 gaaaaaagaggaggaagaagat 184687
>gb|AC012354.11| Homo sapiens BAC clone RP11-89K21 from 2, complete sequence Length = 171167 Score = 44.1 bits (22), Expect = 1.2 Identities = 25/26 (96%) Strand = Plus / Minus Query: 146 gaagaagaaaaaagaggaggaagaag 171 ||||||||| |||||||||||||||| Sbjct: 5419 gaagaagaagaaagaggaggaagaag 5394
>gb|AC144715.4| Mus musculus BAC clone RP23-295N8 from chromosome unknown, complete sequence Length = 208503 Score = 44.1 bits (22), Expect = 1.2 Identities = 31/34 (91%) Strand = Plus / Minus Query: 249 catcatcctgctcatcctcctcatcatcctcatc 282 ||||||||| ||| |||||||||||||| ||||| Sbjct: 48109 catcatcctcctcctcctcctcatcatcttcatc 48076
>gb|AC093748.3| Homo sapiens BAC clone RP11-29P18 from 4, complete sequence Length = 112626 Score = 44.1 bits (22), Expect = 1.2 Identities = 28/30 (93%) Strand = Plus / Plus Query: 251 tcatcctgctcatcctcctcatcatcctca 280 ||||||| ||||||||||||||| |||||| Sbjct: 74864 tcatcctcctcatcctcctcatcctcctca 74893 Score = 42.1 bits (21), Expect = 4.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 254 tcctgctcatcctcctcatcatcctcatc 282 |||| ||||||||||||||| |||||||| Sbjct: 74858 tcctcctcatcctcctcatcctcctcatc 74886
>gb|AC008192.8|AC008192 Drosophila melanogaster, chromosome 3R, region 92A-92A, BAC clone BACR12P10, complete sequence Length = 186686 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 258 gctcatcctcctcatcatcctc 279 |||||||||||||||||||||| Sbjct: 150618 gctcatcctcctcatcatcctc 150639
>gb|AC008237.4|AC008237 Drosophila melanogaster, chromosome 3R, region 96A-96A, BAC clone BACR47D16, complete sequence Length = 200216 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 747 cggctccatcgccggcggcggc 768 |||||||||||||||||||||| Sbjct: 187809 cggctccatcgccggcggcggc 187788
>gb|AC009916.5|AC009916 Drosophila melanogaster, chromosome 3R, region 96A-96A, BAC clone BACR35N03, complete sequence Length = 169271 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 747 cggctccatcgccggcggcggc 768 |||||||||||||||||||||| Sbjct: 87574 cggctccatcgccggcggcggc 87595
>gb|AC093910.2| Homo sapiens BAC clone RP11-762H11 from 2, complete sequence Length = 166731 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 147 aagaagaaaaaagaggaggaag 168 |||||||||||||||||||||| Sbjct: 15694 aagaagaaaaaagaggaggaag 15673
>gb|AC152504.2| Pan troglodytes BAC clone RP43-147M24 from chromosome 7, complete sequence Length = 178619 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1058 tacatgtatttgtttttagaga 1079 |||||||||||||||||||||| Sbjct: 2307 tacatgtatttgtttttagaga 2286
>emb|CR376858.7| Zebrafish DNA sequence from clone CH211-87A2 in linkage group 8, complete sequence Length = 165716 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1052 tatctatacatgtatttgtttt 1073 |||||||||||||||||||||| Sbjct: 140085 tatctatacatgtatttgtttt 140064 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 189,952,494 Number of extensions: 12053848 Number of successful extensions: 349471 Number of sequences better than 10.0: 482 Number of HSP's gapped: 349392 Number of HSP's successfully gapped: 572 Length of query: 1238 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1215 Effective length of database: 18,503,978,556 Effective search space: 22482333945540 Effective search space used: 22482333945540 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)