ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf131g20 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | Os07g0671000:Os07g0671000 | 140 | 1e-33 | 2 | Os03g0346200:Os03g0346200 | 112 | 3e-25 | 3 | AY659938:Os01g0257300 | 98 | 6e-21 | 4 | AK070626:Os01g0257300 | 98 | 6e-21 | 5 | AK104536:Os02g0460200 | 87 | 1e-17 | 6 | AK065150:Os02g0460200 | 87 | 1e-17 | 7 | AK060911:Os02g0460200 | 87 | 1e-17 | 8 | AY304538:Os01g0933500 | 86 | 2e-17 | 9 | AK120187:Os04g0282400 | 82 | 5e-16 |
|---|
>Os07g0671000:Os07g0671000 | Length = 106 Score = 140 bits (352), Expect = 1e-33 Identities = 68/108 (62%), Positives = 81/108 (75%) Frame = +3 Query: 33 MAGGGVWVFRKDGVMELMSAGVQXXXXXXXXXXXLVYVPANETMRSLEALEQRLGSLGWE 212 MAGGGVWVFR +GVMEL LV+V +E +RS EALE+RLG+LGWE Sbjct: 1 MAGGGVWVFRNNGVMELEEQATSRKA--------LVHVATSEVIRSTEALERRLGALGWE 52 Query: 213 RYYENRDIVQLHRRDGGVDLIALPRDFAKFRSTHMYDIVVKNRHHFKV 356 RYYE+R +QLHRRDG DLI++PRDF++FRSTHMYD+VVKNR HFKV Sbjct: 53 RYYEDRATLQLHRRDGSADLISIPRDFSRFRSTHMYDVVVKNRDHFKV 100
>Os03g0346200:Os03g0346200 | Length = 101 Score = 112 bits (279), Expect = 3e-25 Identities = 50/64 (78%), Positives = 58/64 (90%) Frame = +3 Query: 162 MRSLEALEQRLGSLGWERYYENRDIVQLHRRDGGVDLIALPRDFAKFRSTHMYDIVVKNR 341 M SL+ALE+RL LGWERYYE+R +VQLHRRDGG DLI+LPRDFA+FRSTHMYD+V+KNR Sbjct: 1 MGSLQALERRLAGLGWERYYEDRAVVQLHRRDGGADLISLPRDFARFRSTHMYDVVLKNR 60 Query: 342 HHFK 353 HFK Sbjct: 61 DHFK 64
>AY659938:Os01g0257300 | Length = 109 Score = 97.8 bits (242), Expect = 6e-21 Identities = 53/108 (49%), Positives = 68/108 (62%), Gaps = 2/108 (1%) Frame = +3 Query: 45 GVWVFRKDGVMELMSA--GVQXXXXXXXXXXXLVYVPANETMRSLEALEQRLGSLGWERY 218 GVWVF K+GV+ L+ LV+ P+ + + S ALE RL +LGWERY Sbjct: 3 GVWVF-KNGVVRLVEKQQATAGTAVAGGRRKALVHTPSGQVVSSYAALEARLTALGWERY 61 Query: 219 YENRDIVQLHRRDGGVDLIALPRDFAKFRSTHMYDIVVKNRHHFKVVD 362 YE+ + Q H+R G +DLI+LP DF+ F S HMYDIVVKNR F+VVD Sbjct: 62 YEDPSLFQFHKR-GSLDLISLPADFSAFSSVHMYDIVVKNRDSFRVVD 108
>AK070626:Os01g0257300 | Length = 109 Score = 97.8 bits (242), Expect = 6e-21 Identities = 53/108 (49%), Positives = 68/108 (62%), Gaps = 2/108 (1%) Frame = +3 Query: 45 GVWVFRKDGVMELMSA--GVQXXXXXXXXXXXLVYVPANETMRSLEALEQRLGSLGWERY 218 GVWVF K+GV+ L+ LV+ P+ + + S ALE RL +LGWERY Sbjct: 3 GVWVF-KNGVVRLVEKQQATAGTAVAGGRRKALVHTPSGQVVSSYAALEARLTALGWERY 61 Query: 219 YENRDIVQLHRRDGGVDLIALPRDFAKFRSTHMYDIVVKNRHHFKVVD 362 YE+ + Q H+R G +DLI+LP DF+ F S HMYDIVVKNR F+VVD Sbjct: 62 YEDPSLFQFHKR-GSLDLISLPADFSAFSSVHMYDIVVKNRDSFRVVD 108
>AK104536:Os02g0460200 | Length = 122 Score = 86.7 bits (213), Expect = 1e-17 Identities = 53/115 (46%), Positives = 69/115 (60%), Gaps = 9/115 (7%) Frame = +3 Query: 45 GVWVFRKDGVM---------ELMSAGVQXXXXXXXXXXXLVYVPANETMRSLEALEQRLG 197 GVWVF KDG++ E SAG LV+VP+ E + S E LE+RL Sbjct: 3 GVWVF-KDGIVRRVENPGSEESSSAG---DGGGGGRRKVLVHVPSGEVVASYEVLERRLR 58 Query: 198 SLGWERYYENRDIVQLHRRDGGVDLIALPRDFAKFRSTHMYDIVVKNRHHFKVVD 362 LGWERY + ++Q H+R V LI++PRDF+KF+ HMYDIVVK R+ F+V D Sbjct: 59 ELGWERYLTDPCLLQFHQRST-VHLISVPRDFSKFKLVHMYDIVVKTRNVFEVRD 112
>AK065150:Os02g0460200 | Length = 122 Score = 86.7 bits (213), Expect = 1e-17 Identities = 53/115 (46%), Positives = 69/115 (60%), Gaps = 9/115 (7%) Frame = +3 Query: 45 GVWVFRKDGVM---------ELMSAGVQXXXXXXXXXXXLVYVPANETMRSLEALEQRLG 197 GVWVF KDG++ E SAG LV+VP+ E + S E LE+RL Sbjct: 3 GVWVF-KDGIVRRVENPGSEESSSAG---DGGGGGRRKVLVHVPSGEVVASYEVLERRLR 58 Query: 198 SLGWERYYENRDIVQLHRRDGGVDLIALPRDFAKFRSTHMYDIVVKNRHHFKVVD 362 LGWERY + ++Q H+R V LI++PRDF+KF+ HMYDIVVK R+ F+V D Sbjct: 59 ELGWERYLTDPCLLQFHQRST-VHLISVPRDFSKFKLVHMYDIVVKTRNVFEVRD 112
>AK060911:Os02g0460200 | Length = 122 Score = 86.7 bits (213), Expect = 1e-17 Identities = 53/115 (46%), Positives = 69/115 (60%), Gaps = 9/115 (7%) Frame = +3 Query: 45 GVWVFRKDGVM---------ELMSAGVQXXXXXXXXXXXLVYVPANETMRSLEALEQRLG 197 GVWVF KDG++ E SAG LV+VP+ E + S E LE+RL Sbjct: 3 GVWVF-KDGIVRRVENPGSEESSSAG---DGGGGGRRKVLVHVPSGEVVASYEVLERRLR 58 Query: 198 SLGWERYYENRDIVQLHRRDGGVDLIALPRDFAKFRSTHMYDIVVKNRHHFKVVD 362 LGWERY + ++Q H+R V LI++PRDF+KF+ HMYDIVVK R+ F+V D Sbjct: 59 ELGWERYLTDPCLLQFHQRST-VHLISVPRDFSKFKLVHMYDIVVKTRNVFEVRD 112
>AY304538:Os01g0933500 | Length = 127 Score = 85.9 bits (211), Expect = 2e-17 Identities = 50/127 (39%), Positives = 72/127 (56%), Gaps = 20/127 (15%) Frame = +3 Query: 45 GVWVFRKDGVMELMS------------AGVQXXXXXXXXXXXLVYVPANETMRSLEALEQ 188 GVWVFR +GV++L+ G L+++P E + S +LE+ Sbjct: 3 GVWVFR-NGVVKLVENPPASANSGGGGGGGGGGGGGGIRRKALLHMPTGEVVTSYASLER 61 Query: 189 RLGSLGWERYYENRD--------IVQLHRRDGGVDLIALPRDFAKFRSTHMYDIVVKNRH 344 +L +LGWERYY ++Q H+R VDLI+LP+DF++F S HMYDIVVKNR Sbjct: 62 KLAALGWERYYSGGGGAAAAAAMMLQFHKRSS-VDLISLPKDFSQFGSVHMYDIVVKNRD 120 Query: 345 HFKVVDI 365 F+V+D+ Sbjct: 121 AFRVIDV 127
>AK120187:Os04g0282400 | Length = 118 Score = 81.6 bits (200), Expect = 5e-16 Identities = 48/111 (43%), Positives = 69/111 (62%), Gaps = 5/111 (4%) Frame = +3 Query: 45 GVWVFRKDGVM-----ELMSAGVQXXXXXXXXXXXLVYVPANETMRSLEALEQRLGSLGW 209 GVWVF +DG++ E S G + LV+VP++E + S E LE+RL LGW Sbjct: 3 GVWVF-EDGMVRRADSEAPSRG-RGVGGGGGGGKVLVHVPSSEVVTSYEVLERRLRELGW 60 Query: 210 ERYYENRDIVQLHRRDGGVDLIALPRDFAKFRSTHMYDIVVKNRHHFKVVD 362 ERY + ++Q H+R V LI++PRDF++ + HMYD+VVK R+ F+V D Sbjct: 61 ERYLNDPCLLQFHQR-STVHLISVPRDFSRLKLVHMYDVVVKTRNVFEVRD 110 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 15,886,404 Number of extensions: 297411 Number of successful extensions: 939 Number of sequences better than 10.0: 9 Number of HSP's gapped: 931 Number of HSP's successfully gapped: 9 Length of query: 238 Length of database: 15,399,855 Length adjustment: 98 Effective length of query: 140 Effective length of database: 11,475,837 Effective search space: 1606617180 Effective search space used: 1606617180 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
