ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | FLbaf133j18 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK067207:Os07g0639600 | 416 | e-116 | 2 | AK105043:Os09g0396300 | 412 | e-115 | 3 | AK060069:Os09g0396300 | 412 | e-115 | 4 | AK099464:Os03g0367900 | 347 | 8e-96 | 5 | AK062116:Os03g0367900 | 347 | 8e-96 | 6 | AK067030:Os12g0641400 | 35 | 0.091 | 7 | AK099489:Os09g0467200 | 31 | 1.7 | 8 | AK061838:Os09g0467200 | 31 | 1.7 | 9 | AK060223:Os09g0467200 | 31 | 1.7 | 10 | AF402804:Os09g0467200 | 31 | 1.7 |
|---|
>AK067207:Os07g0639600 | Length = 219 Score = 416 bits (1070), Expect = e-116 Identities = 200/219 (91%), Positives = 214/219 (97%) Frame = +2 Query: 140 MGSEGPSIVTVHVTGFKKFHGVAENPTEKLVTNIKSFIEKRGLPKNLVLGSCEILETAGQ 319 MGSEGPS+VTVHVTGFKKFHGVAENPTEK+V N+KSF+EK+GLPKNLVLGSC +LETAGQ Sbjct: 1 MGSEGPSVVTVHVTGFKKFHGVAENPTEKIVGNLKSFVEKKGLPKNLVLGSCTVLETAGQ 60 Query: 320 GALGTLYKVLESAIADRENGSSAQGQIIWVHFGVNSGASRFALENQAVNEATFRCPDELG 499 GALGTLYKVLESAIA+RENGSSAQGQ+IW+HFGVNSGA+RFALENQAVNEATFRCPDELG Sbjct: 61 GALGTLYKVLESAIAERENGSSAQGQVIWIHFGVNSGATRFALENQAVNEATFRCPDELG 120 Query: 500 WKPQRVPIVPSDGSISRTRETTLPVKELTKSLRKTGYDVMPSDDAGRFVCNYVYYHSLRF 679 WKPQRVPIVPSDG+ISRTRETTLPV ELTKSLRKTGYDVMPSDDAGRFVCNYVYYHSLRF Sbjct: 121 WKPQRVPIVPSDGAISRTRETTLPVNELTKSLRKTGYDVMPSDDAGRFVCNYVYYHSLRF 180 Query: 680 AEQHGIKSLFVHVPLFSTVDEEVQIHFVASLVEALASLN 796 AEQHGIKSLFVHVPLF T+DEEVQ+HFVASL+EALA LN Sbjct: 181 AEQHGIKSLFVHVPLFLTIDEEVQMHFVASLLEALAVLN 219
>AK105043:Os09g0396300 | Length = 216 Score = 412 bits (1058), Expect = e-115 Identities = 196/216 (90%), Positives = 211/216 (97%) Frame = +2 Query: 140 MGSEGPSIVTVHVTGFKKFHGVAENPTEKLVTNIKSFIEKRGLPKNLVLGSCEILETAGQ 319 MGSEGPS+VTVHVTGFKKFHGVAENPTEK+VTN+KSF+EK+GLPKNLVLGSC +LETAGQ Sbjct: 1 MGSEGPSVVTVHVTGFKKFHGVAENPTEKIVTNLKSFVEKKGLPKNLVLGSCTVLETAGQ 60 Query: 320 GALGTLYKVLESAIADRENGSSAQGQIIWVHFGVNSGASRFALENQAVNEATFRCPDELG 499 GALGTLYKVLES+IA+RENGSSAQGQ+IW+HFGVNSGA+RFALENQAVNEATFRCPDELG Sbjct: 61 GALGTLYKVLESSIAERENGSSAQGQVIWIHFGVNSGATRFALENQAVNEATFRCPDELG 120 Query: 500 WKPQRVPIVPSDGSISRTRETTLPVKELTKSLRKTGYDVMPSDDAGRFVCNYVYYHSLRF 679 WKPQR PIVPSDG ISRTRETTLPV ELTKSLRKTGYDVMPSDDAGRFVCNYVYYHSLRF Sbjct: 121 WKPQRAPIVPSDGGISRTRETTLPVNELTKSLRKTGYDVMPSDDAGRFVCNYVYYHSLRF 180 Query: 680 AEQHGIKSLFVHVPLFSTVDEEVQIHFVASLVEALA 787 AEQHGIKSLFVHVPLF T+DEEVQ+HFVASL+EAL+ Sbjct: 181 AEQHGIKSLFVHVPLFLTIDEEVQMHFVASLLEALS 216
>AK060069:Os09g0396300 | Length = 216 Score = 412 bits (1058), Expect = e-115 Identities = 196/216 (90%), Positives = 211/216 (97%) Frame = +2 Query: 140 MGSEGPSIVTVHVTGFKKFHGVAENPTEKLVTNIKSFIEKRGLPKNLVLGSCEILETAGQ 319 MGSEGPS+VTVHVTGFKKFHGVAENPTEK+VTN+KSF+EK+GLPKNLVLGSC +LETAGQ Sbjct: 1 MGSEGPSVVTVHVTGFKKFHGVAENPTEKIVTNLKSFVEKKGLPKNLVLGSCTVLETAGQ 60 Query: 320 GALGTLYKVLESAIADRENGSSAQGQIIWVHFGVNSGASRFALENQAVNEATFRCPDELG 499 GALGTLYKVLES+IA+RENGSSAQGQ+IW+HFGVNSGA+RFALENQAVNEATFRCPDELG Sbjct: 61 GALGTLYKVLESSIAERENGSSAQGQVIWIHFGVNSGATRFALENQAVNEATFRCPDELG 120 Query: 500 WKPQRVPIVPSDGSISRTRETTLPVKELTKSLRKTGYDVMPSDDAGRFVCNYVYYHSLRF 679 WKPQR PIVPSDG ISRTRETTLPV ELTKSLRKTGYDVMPSDDAGRFVCNYVYYHSLRF Sbjct: 121 WKPQRAPIVPSDGGISRTRETTLPVNELTKSLRKTGYDVMPSDDAGRFVCNYVYYHSLRF 180 Query: 680 AEQHGIKSLFVHVPLFSTVDEEVQIHFVASLVEALA 787 AEQHGIKSLFVHVPLF T+DEEVQ+HFVASL+EAL+ Sbjct: 181 AEQHGIKSLFVHVPLFLTIDEEVQMHFVASLLEALS 216
>AK099464:Os03g0367900 | Length = 222 Score = 347 bits (890), Expect = 8e-96 Identities = 167/219 (76%), Positives = 191/219 (87%) Frame = +2 Query: 140 MGSEGPSIVTVHVTGFKKFHGVAENPTEKLVTNIKSFIEKRGLPKNLVLGSCEILETAGQ 319 MGSEGPS VTVHVTGFKKFHGVAENPTEK+V N++SF+EKRGLPK L LGSC +LETAGQ Sbjct: 1 MGSEGPSGVTVHVTGFKKFHGVAENPTEKIVRNLESFMEKRGLPKGLTLGSCTVLETAGQ 60 Query: 320 GALGTLYKVLESAIADRENGSSAQGQIIWVHFGVNSGASRFALENQAVNEATFRCPDELG 499 G LG LY+V ESAI D+E G + QGQ+I +HFGVNSG +RFALENQA+NEATFRCPDELG Sbjct: 61 GGLGPLYEVFESAIVDKEYGLNDQGQVILLHFGVNSGTTRFALENQAINEATFRCPDELG 120 Query: 500 WKPQRVPIVPSDGSISRTRETTLPVKELTKSLRKTGYDVMPSDDAGRFVCNYVYYHSLRF 679 WKPQR PIV SDGSIS R+TT+PV E+ KSL++ G+DV PSDDAGRFVCNYVYY SLRF Sbjct: 121 WKPQRAPIVSSDGSISNLRKTTVPVNEVNKSLQQMGFDVAPSDDAGRFVCNYVYYQSLRF 180 Query: 680 AEQHGIKSLFVHVPLFSTVDEEVQIHFVASLVEALASLN 796 AEQ GIKSLFVH PLF+T+ EEVQ++FVA+L+E LAS N Sbjct: 181 AEQRGIKSLFVHFPLFTTISEEVQMNFVATLLEVLASQN 219
>AK062116:Os03g0367900 | Length = 222 Score = 347 bits (890), Expect = 8e-96 Identities = 167/219 (76%), Positives = 191/219 (87%) Frame = +2 Query: 140 MGSEGPSIVTVHVTGFKKFHGVAENPTEKLVTNIKSFIEKRGLPKNLVLGSCEILETAGQ 319 MGSEGPS VTVHVTGFKKFHGVAENPTEK+V N++SF+EKRGLPK L LGSC +LETAGQ Sbjct: 1 MGSEGPSGVTVHVTGFKKFHGVAENPTEKIVRNLESFMEKRGLPKGLTLGSCTVLETAGQ 60 Query: 320 GALGTLYKVLESAIADRENGSSAQGQIIWVHFGVNSGASRFALENQAVNEATFRCPDELG 499 G LG LY+V ESAI D+E G + QGQ+I +HFGVNSG +RFALENQA+NEATFRCPDELG Sbjct: 61 GGLGPLYEVFESAIVDKEYGLNDQGQVILLHFGVNSGTTRFALENQAINEATFRCPDELG 120 Query: 500 WKPQRVPIVPSDGSISRTRETTLPVKELTKSLRKTGYDVMPSDDAGRFVCNYVYYHSLRF 679 WKPQR PIV SDGSIS R+TT+PV E+ KSL++ G+DV PSDDAGRFVCNYVYY SLRF Sbjct: 121 WKPQRAPIVSSDGSISNLRKTTVPVNEVNKSLQQMGFDVAPSDDAGRFVCNYVYYQSLRF 180 Query: 680 AEQHGIKSLFVHVPLFSTVDEEVQIHFVASLVEALASLN 796 AEQ GIKSLFVH PLF+T+ EEVQ++FVA+L+E LAS N Sbjct: 181 AEQRGIKSLFVHFPLFTTISEEVQMNFVATLLEVLASQN 219
>AK067030:Os12g0641400 | Length = 489 Score = 35.0 bits (79), Expect = 0.091 Identities = 19/48 (39%), Positives = 24/48 (50%) Frame = +1 Query: 553 KRDYTASERVNQVTPKDRLRCDAFG*RRAVRVQLCVLPLSPVRGAARH 696 +R ++ R Q P + C G RRAVRV LP P+R ARH Sbjct: 4 RRRWSRGGRGAQGPPAEASACGVGGVRRAVRVGAAALPADPLRPGARH 51
>AK099489:Os09g0467200 | Length = 223 Score = 30.8 bits (68), Expect = 1.7 Identities = 25/79 (31%), Positives = 41/79 (51%) Frame = +2 Query: 509 QRVPIVPSDGSISRTRETTLPVKELTKSLRKTGYDVMPSDDAGRFVCNYVYYHSLRFAEQ 688 ++VP++ DG E+T+ V+ + ++ K GY +MPSD R + RFAE+ Sbjct: 54 KKVPVLVHDGK--PLAESTVIVEYIDEAW-KHGYPIMPSDPFDRAQARF----WARFAEE 106 Query: 689 HGIKSLFVHVPLFSTVDEE 745 +L+ P+F T EE Sbjct: 107 KCNAALY---PIFMTTGEE 122
>AK061838:Os09g0467200 | Length = 223 Score = 30.8 bits (68), Expect = 1.7 Identities = 25/79 (31%), Positives = 41/79 (51%) Frame = +2 Query: 509 QRVPIVPSDGSISRTRETTLPVKELTKSLRKTGYDVMPSDDAGRFVCNYVYYHSLRFAEQ 688 ++VP++ DG E+T+ V+ + ++ K GY +MPSD R + RFAE+ Sbjct: 54 KKVPVLVHDGK--PLAESTVIVEYIDEAW-KHGYPIMPSDPFDRAQARF----WARFAEE 106 Query: 689 HGIKSLFVHVPLFSTVDEE 745 +L+ P+F T EE Sbjct: 107 KCNAALY---PIFMTTGEE 122
>AK060223:Os09g0467200 | Length = 223 Score = 30.8 bits (68), Expect = 1.7 Identities = 25/79 (31%), Positives = 41/79 (51%) Frame = +2 Query: 509 QRVPIVPSDGSISRTRETTLPVKELTKSLRKTGYDVMPSDDAGRFVCNYVYYHSLRFAEQ 688 ++VP++ DG E+T+ V+ + ++ K GY +MPSD R + RFAE+ Sbjct: 54 KKVPVLVHDGK--PLAESTVIVEYIDEAW-KHGYPIMPSDPFDRAQARF----WARFAEE 106 Query: 689 HGIKSLFVHVPLFSTVDEE 745 +L+ P+F T EE Sbjct: 107 KCNAALY---PIFMTTGEE 122
>AF402804:Os09g0467200 | Length = 223 Score = 30.8 bits (68), Expect = 1.7 Identities = 25/79 (31%), Positives = 41/79 (51%) Frame = +2 Query: 509 QRVPIVPSDGSISRTRETTLPVKELTKSLRKTGYDVMPSDDAGRFVCNYVYYHSLRFAEQ 688 ++VP++ DG E+T+ V+ + ++ K GY +MPSD R + RFAE+ Sbjct: 54 KKVPVLVHDGK--PLAESTVIVEYIDEAW-KHGYPIMPSDPFDRAQARF----WARFAEE 106 Query: 689 HGIKSLFVHVPLFSTVDEE 745 +L+ P+F T EE Sbjct: 107 KCNAALY---PIFMTTGEE 122 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 30,222,670 Number of extensions: 677403 Number of successful extensions: 1806 Number of sequences better than 10.0: 10 Number of HSP's gapped: 1804 Number of HSP's successfully gapped: 10 Length of query: 358 Length of database: 15,399,855 Length adjustment: 102 Effective length of query: 256 Effective length of database: 11,315,673 Effective search space: 2896812288 Effective search space used: 2896812288 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
