| Clone Name | FLbaf131f17 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AF000939.1|AF000939 Hordeum vulgare aleurone ribonuclease mRNA, partial cds Length = 739 Score = 1431 bits (722), Expect = 0.0 Identities = 728/730 (99%) Strand = Plus / Plus Query: 18 acaggccaagatgaagctcgtcgtgctctcggccctgctcctgctttctctcgtcgccgt 77 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10 acaggccaagatgaagctcgtcgtgctctcggccctgctcctgctttctctcgtcgccgt 69 Query: 78 ctcctcggcggaggaattcgatttcttctaccttgtgcagcaatggccagggtccttctg 137 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 70 ctcctcggcggaggaattcgatttcttctaccttgtgcagcaatggccagggtccttctg 129 Query: 138 tgacacgaagaaggggtgctgcttcccggacaccggcaagccggcgacggacttcggcat 197 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130 tgacacgaagaaggggtgctgcttcccggacaccggcaagccggcgacggacttcggcat 189 Query: 198 ccacgggctctggcccaactacgccgagtgcaagacccgcggcgagctcgacggcgcctt 257 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 190 ccacgggctctggcccaactacgccgagtgcaagacccgcggcgagctcgacggtgcctt 249 Query: 258 ggagatggtgaccaggcggaggaagaagtgctggccggagtcctgcaacagcgagcgcct 317 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 250 ggagatggtgaccaggcggaggaagaagtgctggccggagtcctgcaacagcgagcgcct 309 Query: 318 caagctctgggaaatcagggacctggtgacggagctggacgccaactggccgacgctggc 377 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 310 caagctctgggaaatcagggacctggtgacggagctggacgccaactggccgacgctggc 369 Query: 378 gtgcaagggcgggaagagcttcgagttctggacccacgagtgggagaagcacggcacctg 437 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 370 gtgcaagggcgggaagagcttcgagttctggacccacgagtgggagaagcacggcacctg 429 Query: 438 ctccaacctggaccagcacggctacttcgcgacggcgctcggcttcaaggcccgccacaa 497 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 430 ctccaacctggaccagcacggctacttggcgacggcgctcggcttcaaggcccgccacaa 489 Query: 498 cctcaccagcatcctcgccgacgccgggatcgtgccgtccgacaccgagacctacttcct 557 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 490 cctcaccagcatcctcgccgacgccgggatcgtgccgtccgacaccgagacctacttcct 549 Query: 558 cagcagcatcagggacgccatcagggaggggaccgggttcacggcgaacctggagtgcaa 617 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 550 cagcagcatcagggacgccatcagggaggggaccgggttcacggcgaacctggagtgcaa 609 Query: 618 ccgtggcgtcgacggcgagacgcagctgttccaggtgtaccagtgcatcgaccgcgacgg 677 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 610 ccgtggcgtcgacggcgagacgcagctgttccaggtgtaccagtgcatcgaccgcgacgg 669 Query: 678 ggagaacctcatcgactgcccgctgccgatgcagggcaactgcaaagacagggtccagct 737 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 670 ggagaacctcatcgactgcccgctgccgatgcagggcaactgcaaagacagggtccagct 729 Query: 738 gccggccttc 747 |||||||||| Sbjct: 730 gccggccttc 739
>emb|CT830174.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA113F22, full insert sequence Length = 1439 Score = 180 bits (91), Expect = 7e-42 Identities = 214/255 (83%) Strand = Plus / Plus Query: 325 tgggaaatcagggacctggtgacggagctggacgccaactggccgacgctggcgtgcaag 384 ||||| |||| |||||| ||| ||||||| ||||| ||||||||||||||| |||||||| Sbjct: 754 tgggagatcaaggacctcgtggcggagctcgacgcgaactggccgacgctgtcgtgcaag 813 Query: 385 ggcgggaagagcttcgagttctggacccacgagtgggagaagcacggcacctgctccaac 444 ||||| ||||||||||||||||||| | |||||||| ||||||||||||||||||| | Sbjct: 814 ggcggcaagagcttcgagttctggagctacgagtggaagaagcacggcacctgctcgggc 873 Query: 445 ctggaccagcacggctacttcgcgacggcgctcggcttcaaggcccgccacaacctcacc 504 ||| ||||||||||||||||||| ||||||| | ||||| || ||| ||||| || Sbjct: 874 atgggccagcacggctacttcgcggcggcgctggagctcaagaagcggcacgacctcgcc 933 Query: 505 agcatcctcgccgacgccgggatcgtgccgtccgacaccgagacctacttcctcagcagc 564 | ||||||||| |||||| ||||| || |||||| ||||| ||||| |||| ||||| Sbjct: 934 gccgtcctcgccggcgccggcatcgtcccctccgacgacgagagctactccctcggcagc 993 Query: 565 atcagggacgccatc 579 ||| | ||||||||| Sbjct: 994 atccgcgacgccatc 1008 Score = 113 bits (57), Expect = 1e-21 Identities = 99/113 (87%) Strand = Plus / Plus Query: 604 aacctggagtgcaaccgtggcgtcgacggcgagacgcagctgttccaggtgtaccagtgc 663 ||||| ||||||||||| | || || |||||||||||||||||||||||||||||||||| Sbjct: 1033 aacctcgagtgcaaccgcgacgccgccggcgagacgcagctgttccaggtgtaccagtgc 1092 Query: 664 atcgaccgcgacggggagaacctcatcgactgcccgctgccgatgcagggcaa 716 |||||||| |||| |||| ||| ||||||||| || |||||||||||||| Sbjct: 1093 gtcgaccgctccgggaagaagctcgtcgactgccaactcccgatgcagggcaa 1145 Score = 105 bits (53), Expect = 3e-19 Identities = 71/77 (92%) Strand = Plus / Plus Query: 151 gggtgctgcttcccggacaccggcaagccggcgacggacttcggcatccacgggctctgg 210 ||||||||||||||||||||||||||||||||| ||| |||||||||||||| || ||| Sbjct: 532 gggtgctgcttcccggacaccggcaagccggcggtggagttcggcatccacggcctgtgg 591 Query: 211 cccaactacgccgagtg 227 |||||||||||| |||| Sbjct: 592 cccaactacgccaagtg 608
>emb|CT830173.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA104L20, full insert sequence Length = 1075 Score = 180 bits (91), Expect = 7e-42 Identities = 214/255 (83%) Strand = Plus / Plus Query: 325 tgggaaatcagggacctggtgacggagctggacgccaactggccgacgctggcgtgcaag 384 ||||| |||| |||||| ||| ||||||| ||||| ||||||||||||||| |||||||| Sbjct: 400 tgggagatcaaggacctcgtggcggagctcgacgcgaactggccgacgctgtcgtgcaag 459 Query: 385 ggcgggaagagcttcgagttctggacccacgagtgggagaagcacggcacctgctccaac 444 ||||| ||||||||||||||||||| | |||||||| ||||||||||||||||||| | Sbjct: 460 ggcggcaagagcttcgagttctggagctacgagtggaagaagcacggcacctgctcgggc 519 Query: 445 ctggaccagcacggctacttcgcgacggcgctcggcttcaaggcccgccacaacctcacc 504 ||| ||||||||||||||||||| ||||||| | ||||| || ||| ||||| || Sbjct: 520 atgggccagcacggctacttcgcggcggcgctggagctcaagaagcggcacgacctcgcc 579 Query: 505 agcatcctcgccgacgccgggatcgtgccgtccgacaccgagacctacttcctcagcagc 564 | ||||||||| |||||| ||||| || |||||| ||||| ||||| |||| ||||| Sbjct: 580 gccgtcctcgccggcgccggcatcgtcccctccgacgacgagagctactccctcggcagc 639 Query: 565 atcagggacgccatc 579 ||| | ||||||||| Sbjct: 640 atccgcgacgccatc 654 Score = 129 bits (65), Expect = 2e-26 Identities = 119/137 (86%) Strand = Plus / Plus Query: 91 gaattcgatttcttctaccttgtgcagcaatggccagggtccttctgtgacacgaagaag 150 |||||||| ||||||||||| || ||||| ||||| || || ||||| |||||| || Sbjct: 118 gaattcgacttcttctacctcgtccagcagtggcctggctcgttctgcgacacgcaggct 177 Query: 151 gggtgctgcttcccggacaccggcaagccggcgacggacttcggcatccacgggctctgg 210 ||||||||||||||||||||||||||||||||| ||| |||||||||||||| || ||| Sbjct: 178 gggtgctgcttcccggacaccggcaagccggcggtggagttcggcatccacggcctgtgg 237 Query: 211 cccaactacgccgagtg 227 |||||||||||| |||| Sbjct: 238 cccaactacgccaagtg 254 Score = 113 bits (57), Expect = 1e-21 Identities = 99/113 (87%) Strand = Plus / Plus Query: 604 aacctggagtgcaaccgtggcgtcgacggcgagacgcagctgttccaggtgtaccagtgc 663 ||||| ||||||||||| | || || |||||||||||||||||||||||||||||||||| Sbjct: 679 aacctcgagtgcaaccgcgacgccgccggcgagacgcagctgttccaggtgtaccagtgc 738 Query: 664 atcgaccgcgacggggagaacctcatcgactgcccgctgccgatgcagggcaa 716 |||||||| |||| |||| ||| ||||||||| || |||||||||||||| Sbjct: 739 gtcgaccgctccgggaagaagctcgtcgactgccaactcccgatgcagggcaa 791
>ref|NM_001066891.1| Oryza sativa (japonica cultivar-group) Os07g0630400 (Os07g0630400) mRNA, complete cds Length = 1097 Score = 172 bits (87), Expect = 2e-39 Identities = 213/255 (83%) Strand = Plus / Plus Query: 325 tgggaaatcagggacctggtgacggagctggacgccaactggccgacgctggcgtgcaag 384 ||||| |||| |||||| ||| ||||||| || || ||||||||||||||| |||||||| Sbjct: 404 tgggagatcaaggacctcgtggcggagctcgatgcgaactggccgacgctgtcgtgcaag 463 Query: 385 ggcgggaagagcttcgagttctggacccacgagtgggagaagcacggcacctgctccaac 444 ||||| ||||||||||||||||||| | |||||||| ||||||||||||||||||| | Sbjct: 464 ggcggcaagagcttcgagttctggagctacgagtggaagaagcacggcacctgctcgggc 523 Query: 445 ctggaccagcacggctacttcgcgacggcgctcggcttcaaggcccgccacaacctcacc 504 ||| ||||||||||||||||||| ||||||| | ||||| || ||| ||||| || Sbjct: 524 atgggccagcacggctacttcgcggcggcgctggagctcaagaagcggcacgacctcgcc 583 Query: 505 agcatcctcgccgacgccgggatcgtgccgtccgacaccgagacctacttcctcagcagc 564 | ||||||||| |||||| ||||| || |||||| ||||| ||||| |||| ||||| Sbjct: 584 gccgtcctcgccggcgccggcatcgtcccctccgacgacgagagctactccctcggcagc 643 Query: 565 atcagggacgccatc 579 ||| | ||||||||| Sbjct: 644 atccgcgacgccatc 658 Score = 139 bits (70), Expect = 2e-29 Identities = 121/138 (87%) Strand = Plus / Plus Query: 91 gaattcgatttcttctaccttgtgcagcaatggccagggtccttctgtgacacgaagaag 150 |||||||| ||||||||||| || ||||| ||||| || || ||||| |||||| || Sbjct: 122 gaattcgacttcttctacctcgtccagcagtggcctggctcgttctgcgacacgcaggct 181 Query: 151 gggtgctgcttcccggacaccggcaagccggcgacggacttcggcatccacgggctctgg 210 ||||||||||||||||||||||||||||||||| |||| |||||||||||||| || ||| Sbjct: 182 gggtgctgcttcccggacaccggcaagccggcggcggagttcggcatccacggcctgtgg 241 Query: 211 cccaactacgccgagtgc 228 |||||||||||| ||||| Sbjct: 242 cccaactacgccaagtgc 259 Score = 113 bits (57), Expect = 1e-21 Identities = 99/113 (87%) Strand = Plus / Plus Query: 604 aacctggagtgcaaccgtggcgtcgacggcgagacgcagctgttccaggtgtaccagtgc 663 ||||| ||||||||||| | || || |||||||||||||||||||||||||||||||||| Sbjct: 683 aacctcgagtgcaaccgcgacgccgccggcgagacgcagctgttccaggtgtaccagtgc 742 Query: 664 atcgaccgcgacggggagaacctcatcgactgcccgctgccgatgcagggcaa 716 |||||||| |||| |||| ||| ||||||||| || |||||||||||||| Sbjct: 743 gtcgaccgctccgggaagaagctcgtcgactgccaactcccgatgcagggcaa 795
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7 Length = 29644043 Score = 172 bits (87), Expect = 2e-39 Identities = 213/255 (83%) Strand = Plus / Plus Query: 325 tgggaaatcagggacctggtgacggagctggacgccaactggccgacgctggcgtgcaag 384 ||||| |||| |||||| ||| ||||||| || || ||||||||||||||| |||||||| Sbjct: 26088648 tgggagatcaaggacctcgtggcggagctcgatgcgaactggccgacgctgtcgtgcaag 26088707 Query: 385 ggcgggaagagcttcgagttctggacccacgagtgggagaagcacggcacctgctccaac 444 ||||| ||||||||||||||||||| | |||||||| ||||||||||||||||||| | Sbjct: 26088708 ggcggcaagagcttcgagttctggagctacgagtggaagaagcacggcacctgctcgggc 26088767 Query: 445 ctggaccagcacggctacttcgcgacggcgctcggcttcaaggcccgccacaacctcacc 504 ||| ||||||||||||||||||| ||||||| | ||||| || ||| ||||| || Sbjct: 26088768 atgggccagcacggctacttcgcggcggcgctggagctcaagaagcggcacgacctcgcc 26088827 Query: 505 agcatcctcgccgacgccgggatcgtgccgtccgacaccgagacctacttcctcagcagc 564 | ||||||||| |||||| ||||| || |||||| ||||| ||||| |||| ||||| Sbjct: 26088828 gccgtcctcgccggcgccggcatcgtcccctccgacgacgagagctactccctcggcagc 26088887 Query: 565 atcagggacgccatc 579 ||| | ||||||||| Sbjct: 26088888 atccgcgacgccatc 26088902 Score = 115 bits (58), Expect = 3e-22 Identities = 73/78 (93%) Strand = Plus / Plus Query: 151 gggtgctgcttcccggacaccggcaagccggcgacggacttcggcatccacgggctctgg 210 ||||||||||||||||||||||||||||||||| |||| |||||||||||||| || ||| Sbjct: 26088426 gggtgctgcttcccggacaccggcaagccggcggcggagttcggcatccacggcctgtgg 26088485 Query: 211 cccaactacgccgagtgc 228 |||||||||||| ||||| Sbjct: 26088486 cccaactacgccaagtgc 26088503 Score = 113 bits (57), Expect = 1e-21 Identities = 99/113 (87%) Strand = Plus / Plus Query: 604 aacctggagtgcaaccgtggcgtcgacggcgagacgcagctgttccaggtgtaccagtgc 663 ||||| ||||||||||| | || || |||||||||||||||||||||||||||||||||| Sbjct: 26088927 aacctcgagtgcaaccgcgacgccgccggcgagacgcagctgttccaggtgtaccagtgc 26088986 Query: 664 atcgaccgcgacggggagaacctcatcgactgcccgctgccgatgcagggcaa 716 |||||||| |||| |||| ||| ||||||||| || |||||||||||||| Sbjct: 26088987 gtcgaccgctccgggaagaagctcgtcgactgccaactcccgatgcagggcaa 26089039 Score = 89.7 bits (45), Expect = 2e-14 Identities = 63/69 (91%) Strand = Plus / Plus Query: 398 tcgagttctggacccacgagtgggagaagcacggcacctgctccaacctggaccagcacg 457 |||||||||||| || ||||||| ||||||||||||||||||||||||| | |||||||| Sbjct: 26074264 tcgagttctggagcctcgagtggaagaagcacggcacctgctccaacctcggccagcacg 26074323 Query: 458 gctacttcg 466 |||||||| Sbjct: 26074324 cctacttcg 26074332 Score = 67.9 bits (34), Expect = 7e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 406 tggacccacgagtgggagaagcacggcacctgctccaacctggaccagcacggctacttc 465 |||| |||||||||| ||||||||||||||||||||||| |||||||||||||||| Sbjct: 26045957 tggagccacgagtggagcaagcacggcacctgctccaacctcagccagcacggctacttc 26046016 Query: 466 gc 467 || Sbjct: 26046017 gc 26046018 Score = 44.1 bits (22), Expect = 0.98 Identities = 40/46 (86%) Strand = Plus / Plus Query: 495 caacctcaccagcatcctcgccgacgccgggatcgtgccgtccgac 540 |||||| |||| ||||||||||||| ||| |||||||||||||| Sbjct: 26046052 caaccttaccaagatcctcgccgacggcggcgtcgtgccgtccgac 26046097
>dbj|AP004260.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0011H09 Length = 147992 Score = 172 bits (87), Expect = 2e-39 Identities = 213/255 (83%) Strand = Plus / Plus Query: 325 tgggaaatcagggacctggtgacggagctggacgccaactggccgacgctggcgtgcaag 384 ||||| |||| |||||| ||| ||||||| || || ||||||||||||||| |||||||| Sbjct: 122210 tgggagatcaaggacctcgtggcggagctcgatgcgaactggccgacgctgtcgtgcaag 122269 Query: 385 ggcgggaagagcttcgagttctggacccacgagtgggagaagcacggcacctgctccaac 444 ||||| ||||||||||||||||||| | |||||||| ||||||||||||||||||| | Sbjct: 122270 ggcggcaagagcttcgagttctggagctacgagtggaagaagcacggcacctgctcgggc 122329 Query: 445 ctggaccagcacggctacttcgcgacggcgctcggcttcaaggcccgccacaacctcacc 504 ||| ||||||||||||||||||| ||||||| | ||||| || ||| ||||| || Sbjct: 122330 atgggccagcacggctacttcgcggcggcgctggagctcaagaagcggcacgacctcgcc 122389 Query: 505 agcatcctcgccgacgccgggatcgtgccgtccgacaccgagacctacttcctcagcagc 564 | ||||||||| |||||| ||||| || |||||| ||||| ||||| |||| ||||| Sbjct: 122390 gccgtcctcgccggcgccggcatcgtcccctccgacgacgagagctactccctcggcagc 122449 Query: 565 atcagggacgccatc 579 ||| | ||||||||| Sbjct: 122450 atccgcgacgccatc 122464 Score = 115 bits (58), Expect = 3e-22 Identities = 73/78 (93%) Strand = Plus / Plus Query: 151 gggtgctgcttcccggacaccggcaagccggcgacggacttcggcatccacgggctctgg 210 ||||||||||||||||||||||||||||||||| |||| |||||||||||||| || ||| Sbjct: 121988 gggtgctgcttcccggacaccggcaagccggcggcggagttcggcatccacggcctgtgg 122047 Query: 211 cccaactacgccgagtgc 228 |||||||||||| ||||| Sbjct: 122048 cccaactacgccaagtgc 122065 Score = 113 bits (57), Expect = 1e-21 Identities = 99/113 (87%) Strand = Plus / Plus Query: 604 aacctggagtgcaaccgtggcgtcgacggcgagacgcagctgttccaggtgtaccagtgc 663 ||||| ||||||||||| | || || |||||||||||||||||||||||||||||||||| Sbjct: 122489 aacctcgagtgcaaccgcgacgccgccggcgagacgcagctgttccaggtgtaccagtgc 122548 Query: 664 atcgaccgcgacggggagaacctcatcgactgcccgctgccgatgcagggcaa 716 |||||||| |||| |||| ||| ||||||||| || |||||||||||||| Sbjct: 122549 gtcgaccgctccgggaagaagctcgtcgactgccaactcccgatgcagggcaa 122601 Score = 89.7 bits (45), Expect = 2e-14 Identities = 63/69 (91%) Strand = Plus / Plus Query: 398 tcgagttctggacccacgagtgggagaagcacggcacctgctccaacctggaccagcacg 457 |||||||||||| || ||||||| ||||||||||||||||||||||||| | |||||||| Sbjct: 107826 tcgagttctggagcctcgagtggaagaagcacggcacctgctccaacctcggccagcacg 107885 Query: 458 gctacttcg 466 |||||||| Sbjct: 107886 cctacttcg 107894 Score = 67.9 bits (34), Expect = 7e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 406 tggacccacgagtgggagaagcacggcacctgctccaacctggaccagcacggctacttc 465 |||| |||||||||| ||||||||||||||||||||||| |||||||||||||||| Sbjct: 79519 tggagccacgagtggagcaagcacggcacctgctccaacctcagccagcacggctacttc 79578 Query: 466 gc 467 || Sbjct: 79579 gc 79580 Score = 44.1 bits (22), Expect = 0.98 Identities = 40/46 (86%) Strand = Plus / Plus Query: 495 caacctcaccagcatcctcgccgacgccgggatcgtgccgtccgac 540 |||||| |||| ||||||||||||| ||| |||||||||||||| Sbjct: 79614 caaccttaccaagatcctcgccgacggcggcgtcgtgccgtccgac 79659
>dbj|AK104512.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-302-H11, full insert sequence Length = 1085 Score = 172 bits (87), Expect = 2e-39 Identities = 213/255 (83%) Strand = Plus / Plus Query: 325 tgggaaatcagggacctggtgacggagctggacgccaactggccgacgctggcgtgcaag 384 ||||| |||| |||||| ||| ||||||| || || ||||||||||||||| |||||||| Sbjct: 402 tgggagatcaaggacctcgtggcggagctcgatgcgaactggccgacgctgtcgtgcaag 461 Query: 385 ggcgggaagagcttcgagttctggacccacgagtgggagaagcacggcacctgctccaac 444 ||||| ||||||||||||||||||| | |||||||| ||||||||||||||||||| | Sbjct: 462 ggcggcaagagcttcgagttctggagctacgagtggaagaagcacggcacctgctcgggc 521 Query: 445 ctggaccagcacggctacttcgcgacggcgctcggcttcaaggcccgccacaacctcacc 504 ||| ||||||||||||||||||| ||||||| | ||||| || ||| ||||| || Sbjct: 522 atgggccagcacggctacttcgcggcggcgctggagctcaagaagcggcacgacctcgcc 581 Query: 505 agcatcctcgccgacgccgggatcgtgccgtccgacaccgagacctacttcctcagcagc 564 | ||||||||| |||||| ||||| || |||||| ||||| ||||| |||| ||||| Sbjct: 582 gccgtcctcgccggcgccggcatcgtcccctccgacgacgagagctactccctcggcagc 641 Query: 565 atcagggacgccatc 579 ||| | ||||||||| Sbjct: 642 atccgcgacgccatc 656 Score = 139 bits (70), Expect = 2e-29 Identities = 121/138 (87%) Strand = Plus / Plus Query: 91 gaattcgatttcttctaccttgtgcagcaatggccagggtccttctgtgacacgaagaag 150 |||||||| ||||||||||| || ||||| ||||| || || ||||| |||||| || Sbjct: 120 gaattcgacttcttctacctcgtccagcagtggcctggctcgttctgcgacacgcaggct 179 Query: 151 gggtgctgcttcccggacaccggcaagccggcgacggacttcggcatccacgggctctgg 210 ||||||||||||||||||||||||||||||||| |||| |||||||||||||| || ||| Sbjct: 180 gggtgctgcttcccggacaccggcaagccggcggcggagttcggcatccacggcctgtgg 239 Query: 211 cccaactacgccgagtgc 228 |||||||||||| ||||| Sbjct: 240 cccaactacgccaagtgc 257 Score = 113 bits (57), Expect = 1e-21 Identities = 99/113 (87%) Strand = Plus / Plus Query: 604 aacctggagtgcaaccgtggcgtcgacggcgagacgcagctgttccaggtgtaccagtgc 663 ||||| ||||||||||| | || || |||||||||||||||||||||||||||||||||| Sbjct: 681 aacctcgagtgcaaccgcgacgccgccggcgagacgcagctgttccaggtgtaccagtgc 740 Query: 664 atcgaccgcgacggggagaacctcatcgactgcccgctgccgatgcagggcaa 716 |||||||| |||| |||| ||| ||||||||| || |||||||||||||| Sbjct: 741 gtcgaccgctccgggaagaagctcgtcgactgccaactcccgatgcagggcaa 793
>dbj|AK060320.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-007-F07, full insert sequence Length = 1097 Score = 172 bits (87), Expect = 2e-39 Identities = 213/255 (83%) Strand = Plus / Plus Query: 325 tgggaaatcagggacctggtgacggagctggacgccaactggccgacgctggcgtgcaag 384 ||||| |||| |||||| ||| ||||||| || || ||||||||||||||| |||||||| Sbjct: 404 tgggagatcaaggacctcgtggcggagctcgatgcgaactggccgacgctgtcgtgcaag 463 Query: 385 ggcgggaagagcttcgagttctggacccacgagtgggagaagcacggcacctgctccaac 444 ||||| ||||||||||||||||||| | |||||||| ||||||||||||||||||| | Sbjct: 464 ggcggcaagagcttcgagttctggagctacgagtggaagaagcacggcacctgctcgggc 523 Query: 445 ctggaccagcacggctacttcgcgacggcgctcggcttcaaggcccgccacaacctcacc 504 ||| ||||||||||||||||||| ||||||| | ||||| || ||| ||||| || Sbjct: 524 atgggccagcacggctacttcgcggcggcgctggagctcaagaagcggcacgacctcgcc 583 Query: 505 agcatcctcgccgacgccgggatcgtgccgtccgacaccgagacctacttcctcagcagc 564 | ||||||||| |||||| ||||| || |||||| ||||| ||||| |||| ||||| Sbjct: 584 gccgtcctcgccggcgccggcatcgtcccctccgacgacgagagctactccctcggcagc 643 Query: 565 atcagggacgccatc 579 ||| | ||||||||| Sbjct: 644 atccgcgacgccatc 658 Score = 139 bits (70), Expect = 2e-29 Identities = 121/138 (87%) Strand = Plus / Plus Query: 91 gaattcgatttcttctaccttgtgcagcaatggccagggtccttctgtgacacgaagaag 150 |||||||| ||||||||||| || ||||| ||||| || || ||||| |||||| || Sbjct: 122 gaattcgacttcttctacctcgtccagcagtggcctggctcgttctgcgacacgcaggct 181 Query: 151 gggtgctgcttcccggacaccggcaagccggcgacggacttcggcatccacgggctctgg 210 ||||||||||||||||||||||||||||||||| |||| |||||||||||||| || ||| Sbjct: 182 gggtgctgcttcccggacaccggcaagccggcggcggagttcggcatccacggcctgtgg 241 Query: 211 cccaactacgccgagtgc 228 |||||||||||| ||||| Sbjct: 242 cccaactacgccaagtgc 259 Score = 113 bits (57), Expect = 1e-21 Identities = 99/113 (87%) Strand = Plus / Plus Query: 604 aacctggagtgcaaccgtggcgtcgacggcgagacgcagctgttccaggtgtaccagtgc 663 ||||| ||||||||||| | || || |||||||||||||||||||||||||||||||||| Sbjct: 683 aacctcgagtgcaaccgcgacgccgccggcgagacgcagctgttccaggtgtaccagtgc 742 Query: 664 atcgaccgcgacggggagaacctcatcgactgcccgctgccgatgcagggcaa 716 |||||||| |||| |||| ||| ||||||||| || |||||||||||||| Sbjct: 743 gtcgaccgctccgggaagaagctcgtcgactgccaactcccgatgcagggcaa 795
>ref|NM_001068412.1| Oryza sativa (japonica cultivar-group) Os08g0434100 (Os08g0434100) mRNA, complete cds Length = 1142 Score = 89.7 bits (45), Expect = 2e-14 Identities = 99/117 (84%) Strand = Plus / Plus Query: 100 ttcttctaccttgtgcagcaatggccagggtccttctgtgacacgaagaaggggtgctgc 159 ||||||| ||| |||| ||| ||||| ||||| | ||| ||||||||| || | |||||| Sbjct: 152 ttcttcttcctggtgctgcagtggcccgggtcgtactgcgacacgaagcagagctgctgc 211 Query: 160 ttcccggacaccggcaagccggcgacggacttcggcatccacgggctctggcccaac 216 | |||| | |||||||||||||| | ||||||||||||||||| |||||||||||| Sbjct: 212 tacccgcgctccggcaagccggcggccgacttcggcatccacggcctctggcccaac 268 Score = 58.0 bits (29), Expect = 7e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 402 gttctggacccacgagtgggagaagcacggcacctgc 438 ||||||| | ||||||||||||||||||||||||||| Sbjct: 400 gttctgggcgcacgagtgggagaagcacggcacctgc 436
>gb|AY528721.1| Triticum aestivum S-like RNase (WRN3) mRNA, partial cds Length = 799 Score = 89.7 bits (45), Expect = 2e-14 Identities = 102/121 (84%) Strand = Plus / Plus Query: 96 cgatttcttctaccttgtgcagcaatggccagggtccttctgtgacacgaagaaggggtg 155 ||||||||||||||| |||| ||| ||||| ||||| | ||| ||||||||| || | || Sbjct: 86 cgatttcttctacctcgtgctgcagtggccggggtcgtactgcgacacgaagcagagctg 145 Query: 156 ctgcttcccggacaccggcaagccggcgacggacttcggcatccacgggctctggcccaa 215 ||||| |||| ||||||| |||||| |||||||||| ||||||||||| |||||||| Sbjct: 146 ctgctacccgcggtccggcaaaccggcggcggacttcgggatccacgggctgtggcccaa 205 Query: 216 c 216 | Sbjct: 206 c 206 Score = 56.0 bits (28), Expect = 3e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 403 ttctggacccacgagtgggagaagcacggcacctgc 438 |||||| | ||||||||||||||||||||||||||| Sbjct: 339 ttctgggcgcacgagtgggagaagcacggcacctgc 374
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8 Length = 28434780 Score = 89.7 bits (45), Expect = 2e-14 Identities = 99/117 (84%) Strand = Plus / Plus Query: 100 ttcttctaccttgtgcagcaatggccagggtccttctgtgacacgaagaaggggtgctgc 159 ||||||| ||| |||| ||| ||||| ||||| | ||| ||||||||| || | |||||| Sbjct: 21043637 ttcttcttcctggtgctgcagtggcccgggtcgtactgcgacacgaagcagagctgctgc 21043696 Query: 160 ttcccggacaccggcaagccggcgacggacttcggcatccacgggctctggcccaac 216 | |||| | |||||||||||||| | ||||||||||||||||| |||||||||||| Sbjct: 21043697 tacccgcgctccggcaagccggcggccgacttcggcatccacggcctctggcccaac 21043753 Score = 58.0 bits (29), Expect = 7e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 402 gttctggacccacgagtgggagaagcacggcacctgc 438 ||||||| | ||||||||||||||||||||||||||| Sbjct: 21044846 gttctgggcgcacgagtgggagaagcacggcacctgc 21044882
>dbj|AP004666.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0431A03 Length = 149500 Score = 89.7 bits (45), Expect = 2e-14 Identities = 99/117 (84%) Strand = Plus / Plus Query: 100 ttcttctaccttgtgcagcaatggccagggtccttctgtgacacgaagaaggggtgctgc 159 ||||||| ||| |||| ||| ||||| ||||| | ||| ||||||||| || | |||||| Sbjct: 109812 ttcttcttcctggtgctgcagtggcccgggtcgtactgcgacacgaagcagagctgctgc 109871 Query: 160 ttcccggacaccggcaagccggcgacggacttcggcatccacgggctctggcccaac 216 | |||| | |||||||||||||| | ||||||||||||||||| |||||||||||| Sbjct: 109872 tacccgcgctccggcaagccggcggccgacttcggcatccacggcctctggcccaac 109928 Score = 58.0 bits (29), Expect = 7e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 402 gttctggacccacgagtgggagaagcacggcacctgc 438 ||||||| | ||||||||||||||||||||||||||| Sbjct: 111021 gttctgggcgcacgagtgggagaagcacggcacctgc 111057
>dbj|AP004306.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0506F02 Length = 151612 Score = 89.7 bits (45), Expect = 2e-14 Identities = 63/69 (91%) Strand = Plus / Plus Query: 398 tcgagttctggacccacgagtgggagaagcacggcacctgctccaacctggaccagcacg 457 |||||||||||| || ||||||| ||||||||||||||||||||||||| | |||||||| Sbjct: 151276 tcgagttctggagcctcgagtggaagaagcacggcacctgctccaacctcggccagcacg 151335 Query: 458 gctacttcg 466 |||||||| Sbjct: 151336 cctacttcg 151344 Score = 67.9 bits (34), Expect = 7e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 406 tggacccacgagtgggagaagcacggcacctgctccaacctggaccagcacggctacttc 465 |||| |||||||||| ||||||||||||||||||||||| |||||||||||||||| Sbjct: 122969 tggagccacgagtggagcaagcacggcacctgctccaacctcagccagcacggctacttc 123028 Query: 466 gc 467 || Sbjct: 123029 gc 123030 Score = 44.1 bits (22), Expect = 0.98 Identities = 40/46 (86%) Strand = Plus / Plus Query: 495 caacctcaccagcatcctcgccgacgccgggatcgtgccgtccgac 540 |||||| |||| ||||||||||||| ||| |||||||||||||| Sbjct: 123064 caaccttaccaagatcctcgccgacggcggcgtcgtgccgtccgac 123109
>dbj|AP005757.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0413H11 Length = 147655 Score = 89.7 bits (45), Expect = 2e-14 Identities = 99/117 (84%) Strand = Plus / Plus Query: 100 ttcttctaccttgtgcagcaatggccagggtccttctgtgacacgaagaaggggtgctgc 159 ||||||| ||| |||| ||| ||||| ||||| | ||| ||||||||| || | |||||| Sbjct: 14847 ttcttcttcctggtgctgcagtggcccgggtcgtactgcgacacgaagcagagctgctgc 14906 Query: 160 ttcccggacaccggcaagccggcgacggacttcggcatccacgggctctggcccaac 216 | |||| | |||||||||||||| | ||||||||||||||||| |||||||||||| Sbjct: 14907 tacccgcgctccggcaagccggcggccgacttcggcatccacggcctctggcccaac 14963 Score = 58.0 bits (29), Expect = 7e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 402 gttctggacccacgagtgggagaagcacggcacctgc 438 ||||||| | ||||||||||||||||||||||||||| Sbjct: 16056 gttctgggcgcacgagtgggagaagcacggcacctgc 16092
>dbj|AK059802.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-204-G01, full insert sequence Length = 1021 Score = 89.7 bits (45), Expect = 2e-14 Identities = 99/117 (84%) Strand = Plus / Plus Query: 100 ttcttctaccttgtgcagcaatggccagggtccttctgtgacacgaagaaggggtgctgc 159 ||||||| ||| |||| ||| ||||| ||||| | ||| ||||||||| || | |||||| Sbjct: 171 ttcttcttcctggtgctgcagtggcccgggtcgtactgcgacacgaagcagagctgctgc 230 Query: 160 ttcccggacaccggcaagccggcgacggacttcggcatccacgggctctggcccaac 216 | |||| | |||||||||||||| | ||||||||||||||||| |||||||||||| Sbjct: 231 tacccgcgctccggcaagccggcggccgacttcggcatccacggcctctggcccaac 287 Score = 58.0 bits (29), Expect = 7e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 402 gttctggacccacgagtgggagaagcacggcacctgc 438 ||||||| | ||||||||||||||||||||||||||| Sbjct: 419 gttctgggcgcacgagtgggagaagcacggcacctgc 455
>dbj|AB052842.1| Oryza sativa mRNA for ribonuclease, complete cds Length = 1154 Score = 89.7 bits (45), Expect = 2e-14 Identities = 99/117 (84%) Strand = Plus / Plus Query: 100 ttcttctaccttgtgcagcaatggccagggtccttctgtgacacgaagaaggggtgctgc 159 ||||||| ||| |||| ||| ||||| ||||| | ||| ||||||||| || | |||||| Sbjct: 152 ttcttcttcctggtgctgcagtggcccgggtcgtactgcgacacgaagcagagctgctgc 211 Query: 160 ttcccggacaccggcaagccggcgacggacttcggcatccacgggctctggcccaac 216 | |||| | |||||||||||||| | ||||||||||||||||| |||||||||||| Sbjct: 212 tacccgcgctccggcaagccggcggccgacttcggcatccacggcctctggcccaac 268 Score = 58.0 bits (29), Expect = 7e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 402 gttctggacccacgagtgggagaagcacggcacctgc 438 ||||||| | ||||||||||||||||||||||||||| Sbjct: 400 gttctgggcgcacgagtgggagaagcacggcacctgc 436
>dbj|AB052844.1| Oryza sativa (japonica cultivar-group) mRNA for ribonuclease, partial cds, clone:E11124 Length = 739 Score = 89.7 bits (45), Expect = 2e-14 Identities = 99/117 (84%) Strand = Plus / Plus Query: 100 ttcttctaccttgtgcagcaatggccagggtccttctgtgacacgaagaaggggtgctgc 159 ||||||| ||| |||| ||| ||||| ||||| | ||| ||||||||| || | |||||| Sbjct: 170 ttcttcttcctggtgctgcagtggcccgggtcgtactgcgacacgaagcagagctgctgc 229 Query: 160 ttcccggacaccggcaagccggcgacggacttcggcatccacgggctctggcccaac 216 | |||| | |||||||||||||| | ||||||||||||||||| |||||||||||| Sbjct: 230 tacccgcgctccggcaagccggcggccgacttcggcatccacggcctctggcccaac 286 Score = 58.0 bits (29), Expect = 7e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 402 gttctggacccacgagtgggagaagcacggcacctgc 438 ||||||| | ||||||||||||||||||||||||||| Sbjct: 418 gttctgggcgcacgagtgggagaagcacggcacctgc 454
>dbj|AB052843.1| Oryza sativa (japonica cultivar-group) mRNA for ribonuclease, complete cds, clone:C30227 Length = 1005 Score = 89.7 bits (45), Expect = 2e-14 Identities = 99/117 (84%) Strand = Plus / Plus Query: 100 ttcttctaccttgtgcagcaatggccagggtccttctgtgacacgaagaaggggtgctgc 159 ||||||| ||| |||| ||| ||||| ||||| | ||| ||||||||| || | |||||| Sbjct: 144 ttcttcttcctggtgctgcagtggcccgggtcgtactgcgacacgaagcagagctgctgc 203 Query: 160 ttcccggacaccggcaagccggcgacggacttcggcatccacgggctctggcccaac 216 | |||| | |||||||||||||| | ||||||||||||||||| |||||||||||| Sbjct: 204 tacccgcgctccggcaagccggcggccgacttcggcatccacggcctctggcccaac 260 Score = 58.0 bits (29), Expect = 7e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 402 gttctggacccacgagtgggagaagcacggcacctgc 438 ||||||| | ||||||||||||||||||||||||||| Sbjct: 392 gttctgggcgcacgagtgggagaagcacggcacctgc 428
>gb|AY107950.1| Zea mays PCO076023 mRNA sequence Length = 1046 Score = 83.8 bits (42), Expect = 1e-12 Identities = 111/134 (82%) Strand = Plus / Plus Query: 83 cggcggaggaattcgatttcttctaccttgtgcagcaatggccagggtccttctgtgaca 142 ||||| |||| | ||| ||||||||||| |||| ||| ||||| ||| ||| ||| |||| Sbjct: 267 cggcgcaggactacgacttcttctacctcgtgctgcagtggccgggggcctactgcgaca 326 Query: 143 cgaagaaggggtgctgcttcccggacaccggcaagccggcgacggacttcggcatccacg 202 | ||| || | ||||||| ||| | |||||||||||||| |||||||||| ||||||| Sbjct: 327 ccaagcagagctgctgctaccccaagtccggcaagccggcggcggacttcgggatccacg 386 Query: 203 ggctctggcccaac 216 | |||||||||||| Sbjct: 387 gcctctggcccaac 400 Score = 56.0 bits (28), Expect = 3e-04 Identities = 28/28 (100%) Strand = Plus / Plus Query: 411 ccacgagtgggagaagcacggcacctgc 438 |||||||||||||||||||||||||||| Sbjct: 541 ccacgagtgggagaagcacggcacctgc 568 Score = 42.1 bits (21), Expect = 3.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 357 cgccaactggccgacgctggcgtgc 381 |||||| |||||||||||||||||| Sbjct: 487 cgccaagtggccgacgctggcgtgc 511
>dbj|AK058502.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-016-F07, full insert sequence Length = 1178 Score = 81.8 bits (41), Expect = 4e-12 Identities = 98/117 (83%) Strand = Plus / Plus Query: 100 ttcttctaccttgtgcagcaatggccagggtccttctgtgacacgaagaaggggtgctgc 159 ||||||| ||| |||| ||| ||||| ||||| | ||| ||||||||| || | |||||| Sbjct: 172 ttcttcttcctggtgctgcagtggcccgggtcgtactgcgacacgaagcagagctgctgc 231 Query: 160 ttcccggacaccggcaagccggcgacggacttcggcatccacgggctctggcccaac 216 | |||| | |||||||||||||| | ||||||||||||||||| ||| |||||||| Sbjct: 232 tacccgcgctccggcaagccggcggccgacttcggcatccacggcctccggcccaac 288 Score = 58.0 bits (29), Expect = 7e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 402 gttctggacccacgagtgggagaagcacggcacctgc 438 ||||||| | ||||||||||||||||||||||||||| Sbjct: 420 gttctgggcgcacgagtgggagaagcacggcacctgc 456
>gb|AF000940.1|AF000940 Hordeum vulgare ribonuclease gene, complete cds Length = 1583 Score = 79.8 bits (40), Expect = 2e-11 Identities = 82/96 (85%) Strand = Plus / Plus Query: 121 tggccagggtccttctgtgacacgaagaaggggtgctgcttcccggacaccggcaagccg 180 ||||| ||||| | ||| |||||||||||| | ||||||| |||| || || |||||| Sbjct: 528 tggccggggtcgtactgcgacacgaagaagagctgctgctacccgcggacggggaagccg 587 Query: 181 gcgacggacttcggcatccacgggctctggcccaac 216 ||| |||||||||| ||||||||||||||||||||| Sbjct: 588 gcggcggacttcgggatccacgggctctggcccaac 623 Score = 60.0 bits (30), Expect = 2e-05 Identities = 36/38 (94%) Strand = Plus / Plus Query: 401 agttctggacccacgagtgggagaagcacggcacctgc 438 |||||||| | ||||||||||||||||||||||||||| Sbjct: 1213 agttctgggcgcacgagtgggagaagcacggcacctgc 1250
>gb|BT019161.1| Zea mays clone Contig826.F mRNA sequence Length = 946 Score = 75.8 bits (38), Expect = 3e-10 Identities = 110/134 (82%) Strand = Plus / Minus Query: 83 cggcggaggaattcgatttcttctaccttgtgcagcaatggccagggtccttctgtgaca 142 ||||| |||| | ||| ||||||||||| |||| ||| ||||| ||| ||| ||| |||| Sbjct: 782 cggcgcaggactacgacttcttctacctcgtgctgcagtggccgggggcctactgcgaca 723 Query: 143 cgaagaaggggtgctgcttcccggacaccggcaagccggcgacggacttcggcatccacg 202 | ||| || | ||||||| ||| | |||||||||||||| |||||||| | ||||||| Sbjct: 722 ccaagcagagctgctgctaccccaagtccggcaagccggcggcggacttcaggatccacg 663 Query: 203 ggctctggcccaac 216 | |||||||||||| Sbjct: 662 gcctctggcccaac 649 Score = 56.0 bits (28), Expect = 3e-04 Identities = 28/28 (100%) Strand = Plus / Minus Query: 411 ccacgagtgggagaagcacggcacctgc 438 |||||||||||||||||||||||||||| Sbjct: 508 ccacgagtgggagaagcacggcacctgc 481 Score = 42.1 bits (21), Expect = 3.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 357 cgccaactggccgacgctggcgtgc 381 |||||| |||||||||||||||||| Sbjct: 562 cgccaagtggccgacgctggcgtgc 538
>gb|AY517470.1| Triticum aestivum S-like RNase (WRN2) mRNA, complete cds Length = 850 Score = 73.8 bits (37), Expect = 1e-09 Identities = 97/117 (82%) Strand = Plus / Plus Query: 100 ttcttctaccttgtgcagcaatggccagggtccttctgtgacacgaagaaggggtgctgc 159 ||||||||||| |||| ||| ||||| ||||| | ||| ||||||||| || | |||||| Sbjct: 110 ttcttctacctcgtgctgcagtggccggggtcgtactgcgacacgaagcagagctgctgc 169 Query: 160 ttcccggacaccggcaagccggcgacggacttcggcatccacgggctctggcccaac 216 | |||| | || ||||||||| |||||||||| |||||||| |||||||||||| Sbjct: 170 tacccgcggtcggggaagccggcggcggacttcgggatccacggcctctggcccaac 226 Score = 60.0 bits (30), Expect = 2e-05 Identities = 36/38 (94%) Strand = Plus / Plus Query: 401 agttctggacccacgagtgggagaagcacggcacctgc 438 |||||||| | ||||||||||||||||||||||||||| Sbjct: 357 agttctgggcgcacgagtgggagaagcacggcacctgc 394
>dbj|AB232936.1| Fagopyrum homotropicum FH gene for S-like RNase, complete cds Length = 1461 Score = 60.0 bits (30), Expect = 2e-05 Identities = 36/38 (94%) Strand = Plus / Plus Query: 403 ttctggacccacgagtgggagaagcacggcacctgctc 440 |||||||| ||||||||||||||||||||||| ||||| Sbjct: 1018 ttctggacacacgagtgggagaagcacggcacgtgctc 1055
>dbj|AB232935.1| Fagopyrum esculentum FE2 gene for S-like RNase, complete cds Length = 1451 Score = 60.0 bits (30), Expect = 2e-05 Identities = 36/38 (94%) Strand = Plus / Plus Query: 403 ttctggacccacgagtgggagaagcacggcacctgctc 440 |||||||| ||||||||||||||||||||||| ||||| Sbjct: 1004 ttctggacacacgagtgggagaagcacggcacgtgctc 1041
>gb|AF202030.1|AF202030 Prunus dulcis RNase PD2 (Pd2) mRNA, complete cds Length = 790 Score = 58.0 bits (29), Expect = 7e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 97 gatttcttctaccttgtgcagcaatggccagggtccttctgtgacacgaagaa 149 |||||||||||| |||| ||||| ||||||||||| | ||||||||| ||||| Sbjct: 79 gatttcttctactttgtccagcagtggccagggtcatactgtgacacaaagaa 131 Score = 42.1 bits (21), Expect = 3.9 Identities = 36/41 (87%) Strand = Plus / Plus Query: 400 gagttctggacccacgagtgggagaagcacggcacctgctc 440 ||||||||||| || || ||||| ||||| ||||||||||| Sbjct: 328 gagttctggacacatgaatgggaaaagcatggcacctgctc 368
>dbj|AK240064.1| Sus scrofa mRNA, clone:UTR010026D04, expressed in uterus Length = 1851 Score = 56.0 bits (28), Expect = 3e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 403 ttctggacccacgagtgggagaagcacggcacctgc 438 ||||||| ||||||||||||||||||||||||||| Sbjct: 512 ttctggaggcacgagtgggagaagcacggcacctgc 547
>dbj|AK234510.1| Sus scrofa mRNA, clone:OVR010074C05, expressed in ovary Length = 1838 Score = 56.0 bits (28), Expect = 3e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 403 ttctggacccacgagtgggagaagcacggcacctgc 438 ||||||| ||||||||||||||||||||||||||| Sbjct: 495 ttctggaggcacgagtgggagaagcacggcacctgc 530
>gb|CP000462.1| Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genome Length = 4744448 Score = 54.0 bits (27), Expect = 0.001 Identities = 27/27 (100%) Strand = Plus / Plus Query: 415 gagtgggagaagcacggcacctgctcc 441 ||||||||||||||||||||||||||| Sbjct: 801596 gagtgggagaagcacggcacctgctcc 801622
>ref|XM_850178.1| PREDICTED: Canis familiaris similar to Ribonuclease T2 precursor (Ribonuclease 6) (LOC612451), mRNA Length = 663 Score = 54.0 bits (27), Expect = 0.001 Identities = 33/35 (94%) Strand = Plus / Plus Query: 403 ttctggacccacgagtgggagaagcacggcacctg 437 ||||||| |||||||||||||||||||||||||| Sbjct: 202 ttctggaagcacgagtgggagaagcacggcacctg 236
>dbj|AB232934.1| Fagopyrum esculentum FE1 mRNA for S-like RNase, complete cds Length = 848 Score = 52.0 bits (26), Expect = 0.004 Identities = 35/38 (92%) Strand = Plus / Plus Query: 403 ttctggacccacgagtgggagaagcacggcacctgctc 440 |||||||| ||||||||||||||||| ||||| ||||| Sbjct: 373 ttctggacacacgagtgggagaagcatggcacgtgctc 410
>gb|U19924.1|ZEU19924 Zinnia elegans wounding-induced ribonuclease mRNA, complete cds Length = 802 Score = 50.1 bits (25), Expect = 0.016 Identities = 46/53 (86%) Strand = Plus / Plus Query: 94 ttcgatttcttctaccttgtgcagcaatggccagggtccttctgtgacacgaa 146 |||||||| ||||||||||| || |||||||| || || | |||||||||||| Sbjct: 108 ttcgattttttctaccttgttcaacaatggccgggatcatactgtgacacgaa 160
>ref|XM_502205.1| Yarrowia lipolytica CLIB122, YALI0C23991g predicted mRNA Length = 1221 Score = 48.1 bits (24), Expect = 0.063 Identities = 33/36 (91%) Strand = Plus / Plus Query: 403 ttctggacccacgagtgggagaagcacggcacctgc 438 |||||||||||||||||| | ||||||| ||||||| Sbjct: 436 ttctggacccacgagtggaacaagcacgccacctgc 471
>dbj|AB243410.1| Bradyrhizobium japonicum DNA, mini-Tn5-flanking sequence, strain: mutant 1C2 Length = 2941 Score = 48.1 bits (24), Expect = 0.063 Identities = 27/28 (96%) Strand = Plus / Plus Query: 413 acgagtgggagaagcacggcacctgctc 440 |||||||||| ||||||||||||||||| Sbjct: 1053 acgagtgggacaagcacggcacctgctc 1080
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 48.1 bits (24), Expect = 0.063 Identities = 27/28 (96%) Strand = Plus / Plus Query: 413 acgagtgggagaagcacggcacctgctc 440 |||||||||| ||||||||||||||||| Sbjct: 8202107 acgagtgggacaagcacggcacctgctc 8202134 Score = 42.1 bits (21), Expect = 3.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 813 gctcgacgcggccggccatct 833 ||||||||||||||||||||| Sbjct: 6052584 gctcgacgcggccggccatct 6052564
>gb|U19923.1|ZEU19923 Zinnia elegans ribonuclease mRNA, complete cds Length = 817 Score = 48.1 bits (24), Expect = 0.063 Identities = 42/48 (87%) Strand = Plus / Plus Query: 94 ttcgatttcttctaccttgtgcagcaatggccagggtccttctgtgac 141 ||||||||||||||| |||| || || ||||||||||| | ||||||| Sbjct: 106 ttcgatttcttctactttgttcaacagtggccagggtcatactgtgac 153
>emb|CR382129.1| Yarrowia lipolytica chromosome C of strain CLIB122 of Yarrowia lipolytica Length = 3272609 Score = 48.1 bits (24), Expect = 0.063 Identities = 33/36 (91%) Strand = Plus / Plus Query: 403 ttctggacccacgagtgggagaagcacggcacctgc 438 |||||||||||||||||| | ||||||| ||||||| Sbjct: 3214934 ttctggacccacgagtggaacaagcacgccacctgc 3214969
>gb|CP000479.1| Mycobacterium avium 104, complete genome Length = 5475491 Score = 46.1 bits (23), Expect = 0.25 Identities = 23/23 (100%) Strand = Plus / Minus Query: 523 gggatcgtgccgtccgacaccga 545 ||||||||||||||||||||||| Sbjct: 4593896 gggatcgtgccgtccgacaccga 4593874
>gb|AE017283.1| Propionibacterium acnes KPA171202, complete genome Length = 2560265 Score = 46.1 bits (23), Expect = 0.25 Identities = 23/23 (100%) Strand = Plus / Plus Query: 171 cggcaagccggcgacggacttcg 193 ||||||||||||||||||||||| Sbjct: 379773 cggcaagccggcgacggacttcg 379795
>gb|AF043516.1|AF043516 Syncephalastrum racemosum RNase Sy (RNASESR) mRNA, partial cds Length = 795 Score = 46.1 bits (23), Expect = 0.25 Identities = 35/39 (89%) Strand = Plus / Plus Query: 399 cgagttctggacccacgagtgggagaagcacggcacctg 437 ||||||||||||||| |||||| | ||||| |||||||| Sbjct: 303 cgagttctggacccatgagtggaacaagcatggcacctg 341
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 46.1 bits (23), Expect = 0.25 Identities = 23/23 (100%) Strand = Plus / Plus Query: 523 gggatcgtgccgtccgacaccga 545 ||||||||||||||||||||||| Sbjct: 4644288 gggatcgtgccgtccgacaccga 4644310
>emb|X67054.1|AHRIBN A.hydrophila gene for ribonuclease Length = 1073 Score = 46.1 bits (23), Expect = 0.25 Identities = 23/23 (100%) Strand = Plus / Plus Query: 415 gagtgggagaagcacggcacctg 437 ||||||||||||||||||||||| Sbjct: 447 gagtgggagaagcacggcacctg 469
>ref|XM_001229195.1| Chaetomium globosum CBS 148.51 hypothetical protein (CHGG_02680) mRNA, complete cds Length = 1641 Score = 44.1 bits (22), Expect = 0.98 Identities = 25/26 (96%) Strand = Plus / Minus Query: 498 cctcaccagcatcctcgccgacgccg 523 |||||||||||||||||||| ||||| Sbjct: 1336 cctcaccagcatcctcgccgccgccg 1311
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 44.1 bits (22), Expect = 0.98 Identities = 25/26 (96%) Strand = Plus / Minus Query: 413 acgagtgggagaagcacggcacctgc 438 |||||||||| ||||||||||||||| Sbjct: 4492830 acgagtgggacaagcacggcacctgc 4492805
>gb|AC167971.3| Mus musculus BAC clone RP24-439I22 from chromosome 7, complete sequence Length = 198057 Score = 44.1 bits (22), Expect = 0.98 Identities = 25/26 (96%) Strand = Plus / Plus Query: 89 aggaattcgatttcttctaccttgtg 114 ||||||| |||||||||||||||||| Sbjct: 184934 aggaattggatttcttctaccttgtg 184959
>ref|XM_597536.2| PREDICTED: Bos taurus similar to transcription factor-like nuclear regulator (LOC519320), mRNA Length = 4251 Score = 44.1 bits (22), Expect = 0.98 Identities = 22/22 (100%) Strand = Plus / Minus Query: 549 ctacttcctcagcagcatcagg 570 |||||||||||||||||||||| Sbjct: 3748 ctacttcctcagcagcatcagg 3727
>gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome Length = 3402093 Score = 44.1 bits (22), Expect = 0.98 Identities = 25/26 (96%) Strand = Plus / Minus Query: 416 agtgggagaagcacggcacctgctcc 441 ||||||| |||||||||||||||||| Sbjct: 2749654 agtgggacaagcacggcacctgctcc 2749629
>emb|BX572607.1| Rhodopseudomonas palustris CGA009 complete genome; segment 15/16 Length = 345012 Score = 44.1 bits (22), Expect = 0.98 Identities = 25/26 (96%) Strand = Plus / Minus Query: 413 acgagtgggagaagcacggcacctgc 438 |||||||||| ||||||||||||||| Sbjct: 46301 acgagtgggacaagcacggcacctgc 46276
>gb|AC158186.2| Selaginella moellendorffii clone JGIASXY-5F17, complete sequence Length = 30844 Score = 44.1 bits (22), Expect = 0.98 Identities = 34/38 (89%) Strand = Plus / Plus Query: 403 ttctggacccacgagtgggagaagcacggcacctgctc 440 |||||| | |||||||||||||||||||| || ||||| Sbjct: 12388 ttctgggcgcacgagtgggagaagcacgggacgtgctc 12425
>gb|AC138657.1| Homo sapiens BAC clone RP11-141I1 from 4, complete sequence Length = 119794 Score = 44.1 bits (22), Expect = 0.98 Identities = 22/22 (100%) Strand = Plus / Plus Query: 100 ttcttctaccttgtgcagcaat 121 |||||||||||||||||||||| Sbjct: 116907 ttcttctaccttgtgcagcaat 116928
>gb|AE017221.1| Thermus thermophilus HB27, complete genome Length = 1894877 Score = 44.1 bits (22), Expect = 0.98 Identities = 22/22 (100%) Strand = Plus / Minus Query: 131 ccttctgtgacacgaagaaggg 152 |||||||||||||||||||||| Sbjct: 649278 ccttctgtgacacgaagaaggg 649257
>emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome Length = 2595221 Score = 44.1 bits (22), Expect = 0.98 Identities = 25/26 (96%) Strand = Plus / Minus Query: 626 tcgacggcgagacgcagctgttccag 651 ||||||||||||||| |||||||||| Sbjct: 688692 tcgacggcgagacgccgctgttccag 688667
>gb|AC130532.3| Mus musculus BAC clone RP23-189G24 from 7, complete sequence Length = 207333 Score = 44.1 bits (22), Expect = 0.98 Identities = 25/26 (96%) Strand = Plus / Plus Query: 89 aggaattcgatttcttctaccttgtg 114 ||||||| |||||||||||||||||| Sbjct: 49360 aggaattggatttcttctaccttgtg 49385
>emb|AM236080.1| Rhizobium leguminosarum bv. viciae chromosome complete genome, strain 3841 Length = 5057142 Score = 42.1 bits (21), Expect = 3.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 466 gcgacggcgctcggcttcaaggccc 490 |||||||||||||||||||| |||| Sbjct: 1572657 gcgacggcgctcggcttcaacgccc 1572681
>gb|CP000113.1| Myxococcus xanthus DK 1622, complete genome Length = 9139763 Score = 42.1 bits (21), Expect = 3.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 235 cgcggcgagctcgacggcgcc 255 ||||||||||||||||||||| Sbjct: 3341967 cgcggcgagctcgacggcgcc 3341987
>emb|CT737237.2| Pan troglodytes chromosome X clone CH251-44N04 map Xq28, complete sequence Length = 148267 Score = 42.1 bits (21), Expect = 3.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 490 cgccacaacctcaccagcatc 510 ||||||||||||||||||||| Sbjct: 42577 cgccacaacctcaccagcatc 42597
>gb|AC167973.4| Mus musculus BAC clone RP23-453B4 from chromosome 9, complete sequence Length = 182190 Score = 42.1 bits (21), Expect = 3.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 332 tcagggacctggtgacggagctgga 356 ||||||||||||||| ||||||||| Sbjct: 117144 tcagggacctggtgagggagctgga 117168
>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome Length = 3188609 Score = 42.1 bits (21), Expect = 3.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 466 gcgacggcgctcggcttcaaggccc 490 |||||||||||||||||||| |||| Sbjct: 2632939 gcgacggcgctcggcttcaacgccc 2632963
>gb|AC102652.9| Mus musculus chromosome 6, clone RP23-20L3, complete sequence Length = 229752 Score = 42.1 bits (21), Expect = 3.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 147 gaaggggtgctgcttcccggacacc 171 ||||||||||||||||| ||||||| Sbjct: 48312 gaaggggtgctgcttcctggacacc 48288
>gb|DQ378284.1| Drosophila virilis strain Tucson 15010-1001.10 chromosome 4 fosmids 23A13 and 15G13, complete sequence Length = 54154 Score = 42.1 bits (21), Expect = 3.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 306 cagcgagcgcctcaagctctgggaaatca 334 |||||||||||| |||| ||||||||||| Sbjct: 5683 cagcgagcgcctaaagccctgggaaatca 5655
>gb|BC027353.1| Mus musculus tripartite motif protein 29, mRNA (cDNA clone MGC:28195 IMAGE:3988926), complete cds Length = 2763 Score = 42.1 bits (21), Expect = 3.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 332 tcagggacctggtgacggagctgga 356 ||||||||||||||| ||||||||| Sbjct: 969 tcagggacctggtgagggagctgga 993
>gb|BC006699.1| Mus musculus tripartite motif protein 29, mRNA (cDNA clone IMAGE:3498575), partial cds Length = 2582 Score = 42.1 bits (21), Expect = 3.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 332 tcagggacctggtgacggagctgga 356 ||||||||||||||| ||||||||| Sbjct: 785 tcagggacctggtgagggagctgga 809
>gb|AC163342.2| Mus musculus BAC clone RP24-115M13 from chromosome 9, complete sequence Length = 204620 Score = 42.1 bits (21), Expect = 3.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 332 tcagggacctggtgacggagctgga 356 ||||||||||||||| ||||||||| Sbjct: 10500 tcagggacctggtgagggagctgga 10524
>dbj|AK013219.1| Mus musculus 10, 11 days embryo whole body cDNA, RIKEN full-length enriched library, clone:2810431N19 product:ATAXIA-TELANGIECTASIA GROUP D-ASSOCIATED PROTEIN (TRIPARTITE MOTIF PROTEIN TRIM29 ALPHA) homolog [Homo sapiens], full insert sequence Length = 1870 Score = 42.1 bits (21), Expect = 3.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 332 tcagggacctggtgacggagctgga 356 ||||||||||||||| ||||||||| Sbjct: 105 tcagggacctggtgagggagctgga 129
>ref|NM_023655.1| Mus musculus tripartite motif protein 29 (Trim29), mRNA dbj|AK028448.1| Mus musculus 0 day neonate skin cDNA, RIKEN full-length enriched library, clone:4631408J18 product:tripartite motif protein 29, full insert sequence Length = 2063 Score = 42.1 bits (21), Expect = 3.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 332 tcagggacctggtgacggagctgga 356 ||||||||||||||| ||||||||| Sbjct: 287 tcagggacctggtgagggagctgga 311
>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome Length = 2909809 Score = 42.1 bits (21), Expect = 3.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 833 tgcacggcgcgcggctggatt 853 ||||||||||||||||||||| Sbjct: 679124 tgcacggcgcgcggctggatt 679144
>gb|AC074325.7| Homo sapiens chromosome 10 clone RP11-542E6, complete sequence Length = 158587 Score = 42.1 bits (21), Expect = 3.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 258 ggagatggtgaccaggcggag 278 ||||||||||||||||||||| Sbjct: 46024 ggagatggtgaccaggcggag 46044
>gb|AC084430.13| Homo sapiens 12p BAC RP11-96B19 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 72022 Score = 42.1 bits (21), Expect = 3.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 552 cttcctcagcagcatcaggga 572 ||||||||||||||||||||| Sbjct: 49749 cttcctcagcagcatcaggga 49769
>emb|AL109622.10|HSDJ526F5 Human DNA sequence from clone RP3-526F5 on chromosome Xq26.3-28 Contains the 3' end of a novel gene and the gene for a novel protein similar to ubiquitin-conjugating enzyme E2N (UBC13 homolog, yeast) (UBE2N), complete sequence Length = 122900 Score = 42.1 bits (21), Expect = 3.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 490 cgccacaacctcaccagcatc 510 ||||||||||||||||||||| Sbjct: 47683 cgccacaacctcaccagcatc 47703
>gb|AF157011.1|AF157011 Prunus dulcis strain Tuono S-like ribonuclease gene, partial cds Length = 1307 Score = 42.1 bits (21), Expect = 3.9 Identities = 36/41 (87%) Strand = Plus / Plus Query: 400 gagttctggacccacgagtgggagaagcacggcacctgctc 440 ||||||||||| || || ||||| ||||| ||||||||||| Sbjct: 860 gagttctggacacatgaatgggaaaagcatggcacctgctc 900
>ref|XM_310475.2| Anopheles gambiae str. PEST ENSANGP00000019220 (ENSANGG00000016731), mRNA Length = 720 Score = 42.1 bits (21), Expect = 3.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 272 ggcggaggaagaagtgctggc 292 ||||||||||||||||||||| Sbjct: 458 ggcggaggaagaagtgctggc 478 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 146,263,736 Number of extensions: 7968403 Number of successful extensions: 174898 Number of sequences better than 10.0: 71 Number of HSP's gapped: 174896 Number of HSP's successfully gapped: 111 Length of query: 1025 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1002 Effective length of database: 18,503,978,556 Effective search space: 18540986513112 Effective search space used: 18540986513112 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)