ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf133j08 |
|---|---|
| Clone Library Name | barley_pub |
>LOC_Os02g39630:12002.t03600:unspliced-genomic iron-stress related protein, putative, expressed| Length = 4242 Score = 127 bits (271), Expect(8) = 1e-57 Identities = 50/65 (76%), Positives = 56/65 (86%) Frame = +3 / +3 Query: 270 DRAEKANYSYNNDGEKSHVPSLKNLPPIIHHDAFVSNAQNDYSHARLVPLEGCSASEASQ 449 DRAEKA+Y YNNDGEKSH PSLKNLPPII H+ F SN QNDYS RL+PLEGC ASEA+Q Sbjct: 2130 DRAEKASYLYNNDGEKSHAPSLKNLPPIIPHETFFSNPQNDYSQTRLIPLEGCCASEAAQ 2309 Query: 450 LLSER 464 LL++R Sbjct: 2310 LLNDR 2324 Score = 46.9 bits (96), Expect(8) = 1e-57 Identities = 19/32 (59%), Positives = 23/32 (71%) Frame = +3 / +2 Query: 579 QMNFLEDLRRAVDAQTGLAAALNTWN*LKSSC 674 QMNF E+LRRA+D Q ++NTWN* SSC Sbjct: 3725 QMNFSEELRRALDEQPVTGPSVNTWN*SSSSC 3820 Score = 44.1 bits (90), Expect(8) = 1e-57 Identities = 16/19 (84%), Positives = 17/19 (89%) Frame = +3 / +3 Query: 186 MADTNPDSIKRYTPPVHRN 242 MAD NPD IKRYTPPVHR+ Sbjct: 126 MADGNPDGIKRYTPPVHRS 182 Score = 42.8 bits (87), Expect(8) = 1e-57 Identities = 20/31 (64%), Positives = 22/31 (70%) Frame = +1 / +1 Query: 490 MTQMIPLINQ*CTLDLADRRGVKVT*NFLIR 582 M M I++*CTLDL D GV VT*NFLIR Sbjct: 3547 MLLMFCQISR*CTLDLVDHHGVMVT*NFLIR 3639 Score = 28.6 bits (56), Expect(8) = 1e-57 Identities = 10/14 (71%), Positives = 13/14 (92%) Frame = +3 / +2 Query: 237 RNRANNRRKAGDRA 278 RNRANNRRK+G ++ Sbjct: 1442 RNRANNRRKSGGKS 1483 Score = 28.1 bits (55), Expect(8) = 1e-57 Identities = 9/10 (90%), Positives = 10/10 (100%) Frame = +3 / +3 Query: 465 WAAAMNMYND 494 WAAAMN+YND Sbjct: 3144 WAAAMNLYND 3173 Score = 26.7 bits (52), Expect(8) = 1e-57 Identities = 10/14 (71%), Positives = 11/14 (78%) Frame = +1 / +1 Query: 826 NHFFL*PYGWKASI 867 N L*PYGWKAS+ Sbjct: 3961 NPAHL*PYGWKASL 4002 Score = 25.8 bits (50), Expect(8) = 1e-57 Identities = 11/21 (52%), Positives = 12/21 (57%) Frame = +3 / +3 Query: 699 QKQAIFPARCVFSFV*KLYV* 761 QK + P RCV V KLY * Sbjct: 3840 QKSNLLPVRCVLYLVLKLYA* 3902 Score = 109 bits (233), Expect(7) = 1e-42 Identities = 45/64 (70%), Positives = 50/64 (78%) Frame = -2 / -1 Query: 459 H*EAVKPHWQNILPMVLILHGCNHFEHC*QKHHDG*LEEGSLVKEHGSSLHHCCMNSWLS 280 H*EA +PHW NI P VLIL CNH E C*+K H+G*L EGSL+KEHGSSLHH C N+ S Sbjct: 2319 H*EAGQPHWHNIPPRVLILFDCNHSEDC*KKSHEG*LVEGSLMKEHGSSLHHYCTNN*PS 2140 Query: 279 QPYL 268 QPYL Sbjct: 2139 QPYL 2128 Score = 40.0 bits (81), Expect(7) = 1e-42 Identities = 17/31 (54%), Positives = 22/31 (70%) Frame = -3 / -2 Query: 602 QIFKEVHLMRKFHVTLTPRRSARSSVHYWFI 510 +I ++LMRKFHVT+TP S RS VH+ I Sbjct: 3659 KIAGSIYLMRKFHVTMTP**STRSRVHHRLI 3567 Score = 39.1 bits (79), Expect(7) = 1e-42 Identities = 15/18 (83%), Positives = 16/18 (88%) Frame = -3 / -2 Query: 239 PVHGRRVSLDAVRVGIRH 186 PVHGR VSLDAVRV +RH Sbjct: 179 PVHGRGVSLDAVRVAVRH 126 Score = 38.2 bits (77), Expect(7) = 1e-42 Identities = 23/57 (40%), Positives = 31/57 (54%) Frame = -3 / -3 Query: 749 FSNETEHTSSWKNSLLLINLLHSTEAA*L*LVPGVERRCQACLSIYRTTQIFKEVHL 579 +S T + + + LL + AA* *LVPGV+RR L I T Q+ +EVHL Sbjct: 3895 YSFSTRYNTQRTGNRLLFCKS*HSNAA*A*LVPGVDRRSCDWLLI*GTAQLLREVHL 3725 Score = 26.3 bits (51), Expect(7) = 1e-42 Identities = 8/15 (53%), Positives = 11/15 (73%) Frame = -3 / -2 Query: 494 VIIHVHCSSPTFTEK 450 +I+ VHC SPT+ K Sbjct: 3173 IIVQVHCCSPTYRGK 3129 Score = 23.5 bits (45), Expect(7) = 1e-42 Identities = 8/9 (88%), Positives = 9/9 (100%) Frame = -3 / -2 Query: 863 LAFHP*GYR 837 LAFHP*GY+ Sbjct: 3998 LAFHP*GYK 3972 Score = 23.5 bits (45), Expect(7) = 1e-42 Identities = 10/13 (76%), Positives = 10/13 (76%) Frame = -1 / -1 Query: 274 LSPALRRLFARFL 236 L P LRRL ARFL Sbjct: 1479 LPPDLRRLLARFL 1441 Score = 108 bits (230), Expect(5) = 5e-35 Identities = 51/65 (78%), Positives = 54/65 (83%) Frame = -1 / -3 Query: 463 RSLRSCEASLAEHPSNGTNLAWL*SF*ALLTKAS*WIIGGRFFSEGTWLFSPSLLYE*LA 284 RSLRS ASLA+HPS G NL L*SF* LL K S* IIGGRFF+EG WLFSPSLLY+*LA Sbjct: 2323 RSLRSWAASLAQHPSKGINLV*L*SF*GLLKKVS*GIIGGRFFNEGAWLFSPSLLYK*LA 2144 Query: 283 FSALS 269 FSALS Sbjct: 2143 FSALS 2129 Score = 36.3 bits (73), Expect(5) = 5e-35 Identities = 14/20 (70%), Positives = 15/20 (75%) Frame = -2 / -1 Query: 240 SCAREACIS*CCPGWYPPWQ 181 +CARE CIS*C PG PP Q Sbjct: 180 TCAREGCIS*CRPGCRPPSQ 121 Score = 35.9 bits (72), Expect(5) = 5e-35 Identities = 16/30 (53%), Positives = 16/30 (53%) Frame = -2 / -1 Query: 579 DEEVSCDLDPTTIRQIQRTLLVYQGNHLGH 490 DEEVSCD DP I IQ T Y H H Sbjct: 3636 DEEVSCDHDPMMIH*IQSTSPAYLAKHQQH 3547 Score = 33.1 bits (66), Expect(5) = 5e-35 Identities = 18/31 (58%), Positives = 20/31 (64%) Frame = -2 / -2 Query: 672 SLTLISSRC*APLPGLFEHLPHDADLQGSSS 580 SL+LISSRC* + L HL H A Q SSS Sbjct: 3818 SLSLISSRC*QTVL*LVAHLGHGATPQRSSS 3726 Score = 22.6 bits (43), Expect(5) = 5e-35 Identities = 8/12 (66%), Positives = 8/12 (66%) Frame = -2 / -2 Query: 273 YLQPCGDCLHDS 238 YLQ C DC H S Sbjct: 1478 YLQTCVDC*HGS 1443 Score = 100 bits (214), Expect(4) = 2e-34 Identities = 45/66 (68%), Positives = 53/66 (80%) Frame = +1 / +1 Query: 268 EIGLRKPTIHTTMMERRAMFLH*RTFLQLSIMMLLSAMLKMITAMQD*YHWKDVLPVRLH 447 +IGLR+ I T MMERRAM LH*RTF QLS+M L SA+L+MIT QD*Y W+DV+PVRL Sbjct: 2128 QIGLRRLVICTIMMERRAMLLH*RTFHQLSLMRLFSAILRMITVKQD*YPWRDVVPVRLP 2307 Query: 448 SFSVNV 465 SFS+ V Sbjct: 2308 SFSMTV 2325 Score = 41.4 bits (84), Expect(4) = 2e-34 Identities = 15/19 (78%), Positives = 16/19 (84%) Frame = +2 / +2 Query: 182 CHGGYQPGQHQEIHASRAQ 238 C GG QPG+HQEIH SRAQ Sbjct: 122 CDGGRQPGRHQEIHPSRAQ 178 Score = 41.4 bits (84), Expect(4) = 2e-34 Identities = 20/32 (62%), Positives = 23/32 (71%) Frame = +1 / +3 Query: 580 R*TSLKICVVR*MLKQAWQRRSTPGTN*SQAA 675 R*TSL+ C V *M Q+ R STPGTN +QAA Sbjct: 3726 R*TSLRSCAVP*MSNQSQDRLSTPGTNQAQAA 3821 Score = 31.3 bits (62), Expect(4) = 2e-34 Identities = 15/26 (57%), Positives = 18/26 (69%) Frame = +2 / +2 Query: 503 FP**TSNVRWIWRIVVGSRSHETSSS 580 F * +V WI I++GS SHETSSS Sbjct: 3560 FAR*AGDVLWI*WIIMGSWSHETSSS 3637 Score = 97.3 bits (206), Expect(3) = 2e-27 Identities = 46/64 (71%), Positives = 51/64 (79%) Frame = +2 / +2 Query: 269 R*G*ESQLFIQQ*WREEPCSFTKEPSSNYPS*CFCQQCSK*LQPCKISTIGRMFCQ*GFT 448 R*G*E LF+Q *WREEPCSF KEPS+NYPS* F QQ S+*LQ KI+T+G M CQ*G Sbjct: 2129 R*G*EG*LFVQ**WREEPCSFIKEPSTNYPS*DFFQQSSE*LQSNKINTLGGMLCQ*GCP 2308 Query: 449 ASQ* 460 ASQ* Sbjct: 2309 ASQ* 2320 Score = 40.5 bits (82), Expect(3) = 2e-27 Identities = 15/18 (83%), Positives = 15/18 (83%) Frame = +1 / +1 Query: 187 WRIPTRTASRDTRLPCTG 240 WR TRTASRDT LPCTG Sbjct: 127 WRTATRTASRDTPLPCTG 180 Score = 32.2 bits (64), Expect(3) = 2e-27 Identities = 17/33 (51%), Positives = 21/33 (63%) Frame = +2 / +1 Query: 575 SSDELP*RSASCGRCSNRPGSGAQHLELIKVKL 673 S+DEL * A C R + + QHLELIK+KL Sbjct: 3721 STDELL*GVAPCPR*ATSHRTVCQHLELIKLKL 3819 Score = 95.5 bits (202), Expect(2) = 4e-20 Identities = 46/65 (70%), Positives = 51/65 (78%) Frame = -3 / -2 Query: 464 TFTEKL*SLTGRTSFQWY*SCMAVIILSIADKSIMMDNWRKVL**RNMALLSIIVV*IVG 285 T EKL SLTG TS Q Y*SC+ VIIL IA+KS+M DNW KVL**R+MALLSII+V I Sbjct: 2324 TVIEKLGSLTGTTSLQGY*SCLTVIILRIAEKSLMRDNWWKVL**RSMALLSIIIVQITS 2145 Query: 284 FLSPI 270 LSPI Sbjct: 2144 LLSPI 2130 Score = 28.1 bits (55), Expect(2) = 4e-20 Identities = 11/12 (91%), Positives = 11/12 (91%) Frame = -1 / -3 Query: 238 LCTGGVYLLMLS 203 LCTGGVYLLM S Sbjct: 178 LCTGGVYLLMPS 143 Score = 68.0 bits (142), Expect = 1e-10 Identities = 29/51 (56%), Positives = 35/51 (68%) Frame = +3 / +3 Query: 432 ASEASQLLSERWAAAMNMYNDPNDSPDKPVMYAGSGGSSWGQGHMKLPHQM 584 +SE S L +R A + N + PDKPVMY+GS GSSWG GHMKLPHQ+ Sbjct: 3489 SSEFSCQLYQREALNQSPLNAVDVLPDKPVMYSGSSGSSWGHGHMKLPHQV 3641
>LOC_Os02g38750:12002.t03513:unspliced-genomic hypothetical protein| Length = 1487 Score = 66.6 bits (139), Expect(2) = 7e-17 Identities = 27/52 (51%), Positives = 33/52 (63%) Frame = +3 / +1 Query: 429 SASEASQLLSERWAAAMNMYNDPNDSPDKPVMYAGSGGSSWGQGHMKLPHQM 584 S+ + QL N+ N + PDKPVMY+GS GSSWG GHMKLPHQ+ Sbjct: 1168 SSEFSCQLYQREALNQSNLLNAVDVLPDKPVMYSGSSGSSWGHGHMKLPHQV 1323 Score = 40.9 bits (83), Expect(2) = 7e-17 Identities = 16/27 (59%), Positives = 20/27 (74%) Frame = +3 / +3 Query: 579 QMNFLEDLRRAVDAQTGLAAALNTWN* 659 QMNF E+LRRA+D Q ++NTWN* Sbjct: 1407 QMNFFEELRRALDEQPVTGPSVNTWN* 1487 Score = 42.8 bits (87), Expect(3) = 2e-09 Identities = 20/31 (64%), Positives = 22/31 (70%) Frame = +1 / +2 Query: 490 MTQMIPLINQ*CTLDLADRRGVKVT*NFLIR 582 M M I++*CTLDL D GV VT*NFLIR Sbjct: 1229 MLLMFCQISR*CTLDLVDHHGVMVT*NFLIR 1321 Score = 34.1 bits (68), Expect(3) = 2e-09 Identities = 16/26 (61%), Positives = 18/26 (69%) Frame = +1 / +1 Query: 580 R*TSLKICVVR*MLKQAWQRRSTPGT 657 R*TSL+ C V *M Q+ R STPGT Sbjct: 1408 R*TSLRSCAVP*MSNQSQDRLSTPGT 1485 Score = 28.1 bits (55), Expect(3) = 2e-09 Identities = 9/10 (90%), Positives = 10/10 (100%) Frame = +3 / +3 Query: 465 WAAAMNMYND 494 WAAAMN+YND Sbjct: 825 WAAAMNLYND 854 Score = 40.0 bits (81), Expect(3) = 6e-08 Identities = 17/31 (54%), Positives = 22/31 (70%) Frame = -3 / -3 Query: 602 QIFKEVHLMRKFHVTLTPRRSARSSVHYWFI 510 +I ++LMRKFHVT+TP S RS VH+ I Sbjct: 1341 KIAGSIYLMRKFHVTMTP**STRSRVHHRLI 1249 Score = 33.6 bits (67), Expect(3) = 6e-08 Identities = 16/27 (59%), Positives = 18/27 (66%) Frame = -3 / -1 Query: 659 LVPGVERRCQACLSIYRTTQIFKEVHL 579 LVPGV+RR L I T Q+ KEVHL Sbjct: 1487 LVPGVDRRSCDWLLI*GTAQLLKEVHL 1407 Score = 26.3 bits (51), Expect(3) = 6e-08 Identities = 8/15 (53%), Positives = 11/15 (73%) Frame = -3 / -1 Query: 494 VIIHVHCSSPTFTEK 450 +I+ VHC SPT+ K Sbjct: 854 IIVQVHCCSPTYRGK 810 Score = 35.9 bits (72), Expect(2) = 0.002 Identities = 16/30 (53%), Positives = 16/30 (53%) Frame = -2 / -2 Query: 579 DEEVSCDLDPTTIRQIQRTLLVYQGNHLGH 490 DEEVSCD DP I IQ T Y H H Sbjct: 1318 DEEVSCDHDPMMIH*IQSTSPAYLAKHQQH 1229 Score = 25.4 bits (49), Expect(2) = 0.002 Identities = 14/26 (53%), Positives = 15/26 (57%) Frame = -2 / -3 Query: 657 SSRC*APLPGLFEHLPHDADLQGSSS 580 SSRC* + L HL H A Q SSS Sbjct: 1485 SSRC*QTVL*LVAHLGHGATPQRSSS 1408 Score = 31.3 bits (62), Expect(2) = 0.16 Identities = 15/26 (57%), Positives = 18/26 (69%) Frame = +2 / +3 Query: 503 FP**TSNVRWIWRIVVGSRSHETSSS 580 F * +V WI I++GS SHETSSS Sbjct: 1242 FAR*AGDVLWI*WIIMGSWSHETSSS 1319 Score = 23.5 bits (45), Expect(2) = 0.16 Identities = 13/28 (46%), Positives = 16/28 (57%) Frame = +2 / +2 Query: 575 SSDELP*RSASCGRCSNRPGSGAQHLEL 658 S+DEL * A C R + + QHLEL Sbjct: 1403 STDELL*GVAPCPR*ATSHRTVCQHLEL 1486
>LOC_Os05g16180:12005.t01389:unspliced-genomic NB-ARC domain containing protein| Length = 5243 Score = 35.0 bits (70), Expect = 0.87 Identities = 15/41 (36%), Positives = 21/41 (51%) Frame = +2 / -3 Query: 647 HLELIKVKLLQWSATDLSEASYFSSSMCVQFRLKTICMISP 769 H I +K L+W EA +SSMC+ RL+ + SP Sbjct: 3822 HFRKIYLKCLRWCKDSAKEAVQLASSMCIILRLEKLINKSP 3700
>LOC_Os06g12460:12006.t01122:unspliced-genomic CSLA3 - cellulose synthase-like family A; mannan synthase,| expressed Length = 4815 Score = 34.5 bits (69), Expect = 1.2 Identities = 13/29 (44%), Positives = 14/29 (48%) Frame = -2 / +2 Query: 117 CFLPPPAQPGCRPLSSTLRLRALPCPTLT 31 C PPPA P P T R R+ P P T Sbjct: 218 CSWPPPASPAAAPTGGTARPRSAPAPAPT 304
>LOC_Os01g26224:12001.t02329:unspliced-genomic transposon protein, putative, CACTA, En/Spm sub-class| Length = 9169 Score = 33.6 bits (67), Expect(2) = 1.5 Identities = 14/31 (45%), Positives = 15/31 (48%) Frame = -2 / +1 Query: 108 PPPAQPGCRPLSSTLRLRALPCPTLTRDAKE 16 PPP P C P R R P PT TR K+ Sbjct: 7762 PPPPPPPCPPAPPKTRSRQAPPPTSTRATKK 7854 Score = 24.0 bits (46), Expect(2) = 1.5 Identities = 7/18 (38%), Positives = 10/18 (55%) Frame = -1 / +2 Query: 451 SCEASLAEHPSNGTNLAW 398 SC+A + HP+ L W Sbjct: 629 SCQAIIVGHPTESKGLKW 682
>LOC_Os06g28360:12006.t02540:unspliced-genomic transposon protein, putative, CACTA, En/Spm sub-class| Length = 2246 Score = 34.1 bits (68), Expect = 1.6 Identities = 14/31 (45%), Positives = 15/31 (48%) Frame = -2 / +3 Query: 108 PPPAQPGCRPLSSTLRLRALPCPTLTRDAKE 16 PPP P C P R R P PT TR K+ Sbjct: 1803 PPPPTPPCPPAPPKTRSRQAPSPTHTRATKK 1895
>LOC_Os11g16890:12011.t01467:unspliced-genomic transposon protein, putative, CACTA, En/Spm sub-class| Length = 1988 Score = 33.6 bits (67), Expect = 2.3 Identities = 14/31 (45%), Positives = 15/31 (48%) Frame = -2 / +1 Query: 108 PPPAQPGCRPLSSTLRLRALPCPTLTRDAKE 16 PPP P C P R R P PT TR K+ Sbjct: 322 PPPPPPPCPPTPPKTRSRQAPPPTRTRATKK 414
>LOC_Os06g31290:12006.t02830:unspliced-genomic conserved hypothetical protein| Length = 327 Score = 33.6 bits (67), Expect = 2.3 Identities = 13/32 (40%), Positives = 16/32 (50%) Frame = -2 / -2 Query: 108 PPPAQPGCRPLSSTLRLRALPCPTLTRDAKEG 13 PPP P RPL + + LP P R +EG Sbjct: 245 PPPPSPPPRPLHAVVPATGLPLPPSARSGREG 150
>LOC_Os07g23169:12007.t02017:unspliced-genomic expressed protein| Length = 10494 Score = 27.2 bits (53), Expect(2) = 2.8 Identities = 12/29 (41%), Positives = 15/29 (51%) Frame = -2 / +1 Query: 96 QPGCRPLSSTLRLRALPCPTLTRDAKEGG 10 Q G RP L A PC T+ R ++GG Sbjct: 9799 QCGWRPPLPRHPLHARPCATVARSRRQGG 9885 Score = 23.1 bits (44), Expect(2) = 2.8 Identities = 8/20 (40%), Positives = 11/20 (55%) Frame = -3 / +2 Query: 248 CTIPVHGRRVSLDAVRVGIR 189 C +P GRR+ L G+R Sbjct: 9704 CQLPARGRRLGLGPYLGGVR 9763
>LOC_Os07g11020:12007.t00976:unspliced-genomic rc - bHLH transcription factor regulating proanthocyanidin production| in seeds, expressed Length = 6429 Score = 26.7 bits (52), Expect(2) = 2.9 Identities = 11/25 (44%), Positives = 15/25 (60%) Frame = -2 / -3 Query: 108 PPPAQPGCRPLSSTLRLRALPCPTL 34 PPP PG +++T RAL C +L Sbjct: 6085 PPPMAPGRLLVTTTTTTRALVCGSL 6011 Score = 23.5 bits (45), Expect(2) = 2.9 Identities = 8/17 (47%), Positives = 8/17 (47%) Frame = -2 / -3 Query: 231 REACIS*CCPGWYPPWQ 181 R C CC PPWQ Sbjct: 6175 RRHCGHCCCSSLPPPWQ 6125
>LOC_Os03g58850:12003.t05137:unspliced-genomic expressed protein| Length = 799 Score = 33.1 bits (66), Expect = 3.1 Identities = 16/36 (44%), Positives = 17/36 (47%) Frame = -2 / -1 Query: 108 PPPAQPGCRPLSSTLRLRALPCPTLTRDAKEGGTKG 1 PPP PG P SS+ R RA P P R G G Sbjct: 217 PPPPPPGATPPSSSRRRRARPWPPPRRAPWRGRAGG 110
>LOC_Os01g11910:12001.t01060:unspliced-genomic DNA binding protein, putative, expressed| Length = 2329 Score = 30.4 bits (60), Expect(2) = 3.7 Identities = 12/29 (41%), Positives = 15/29 (51%) Frame = -2 / +3 Query: 333 VKEHGSSLHHCCMNSWLSQPYLQPCGDCL 247 V H + L C + WLS+P L G CL Sbjct: 732 VCHHSALLAPVCSSCWLSRPCLNLAGSCL 818 Score = 24.0 bits (46), Expect(2) = 3.7 Identities = 10/24 (41%), Positives = 10/24 (41%) Frame = -2 / +3 Query: 108 PPPAQPGCRPLSSTLRLRALPCPT 37 PPP P C SS R P T Sbjct: 1824 PPPPWPRCATRSSPCSTRPAPAST 1895
>LOC_Os05g03040:12005.t00201:unspliced-genomic floral homeotic protein APETALA2, putative, expressed| Length = 4290 Score = 27.6 bits (54), Expect(2) = 3.9 Identities = 11/37 (29%), Positives = 18/37 (48%) Frame = +3 / -2 Query: 246 ANNRRKAGDRAEKANYSYNNDGEKSHVPSLKNLPPII 356 A RR+ +DG + +PSL+ LPP++ Sbjct: 3815 ATTRRRRRRAMAACEEEQGDDGSPASMPSLEQLPPLM 3705 Score = 22.1 bits (42), Expect(2) = 3.9 Identities = 6/9 (66%), Positives = 7/9 (77%) Frame = +2 / -3 Query: 170 GPSCCHGGY 196 G SCC GG+ Sbjct: 3880 GSSCCRGGF 3854
>LOC_Os04g44440:12004.t03984:unspliced-genomic TCP-domain protein, putative, expressed| Length = 1071 Score = 32.7 bits (65), Expect = 4.2 Identities = 13/26 (50%), Positives = 15/26 (57%) Frame = +3 / -2 Query: 837 PVALRMEGKHCRVMYLSQWVLDYSPS 914 PVA RM+G CR + W D SPS Sbjct: 383 PVAARMDGSACRSSHSMVWPSDLSPS 306
>LOC_Os12g10970:12012.t00974:unspliced-genomic transposon protein, putative, CACTA, En/Spm sub-class| Length = 3746 Score = 32.7 bits (65), Expect = 4.3 Identities = 14/31 (45%), Positives = 15/31 (48%) Frame = -2 / +3 Query: 108 PPPAQPGCRPLSSTLRLRALPCPTLTRDAKE 16 PPP P C P R R P P TR AK+ Sbjct: 1911 PPPPPPPCPPAPLKTRSRQAPPPASTRAAKK 2003
>LOC_Os12g08110:12012.t00693:unspliced-genomic transposon protein, putative, CACTA, En/Spm sub-class| Length = 3726 Score = 32.7 bits (65), Expect = 4.3 Identities = 13/31 (41%), Positives = 15/31 (48%) Frame = -2 / +2 Query: 108 PPPAQPGCRPLSSTLRLRALPCPTLTRDAKE 16 PPP P C P +R R P P TR K+ Sbjct: 1880 PPPPPPPCPPAPPKIRSRQAPPPARTRATKK 1972
>LOC_Os04g05420:12004.t00423:unspliced-genomic transposon protein, putative, CACTA, En/Spm sub-class| Length = 5721 Score = 31.3 bits (62), Expect(2) = 4.4 Identities = 13/31 (41%), Positives = 14/31 (45%) Frame = -2 / +1 Query: 108 PPPAQPGCRPLSSTLRLRALPCPTLTRDAKE 16 PPP P C P R R P P TR K+ Sbjct: 4990 PPPPPPPCPPAPPKTRSRQAPPPASTRATKK 5082 Score = 24.0 bits (46), Expect(2) = 4.4 Identities = 7/18 (38%), Positives = 10/18 (55%) Frame = -1 / +3 Query: 451 SCEASLAEHPSNGTNLAW 398 SC+A + HP+ L W Sbjct: 2616 SCQAIIVGHPTESKGLKW 2669
>LOC_Os03g14540:12003.t01243:unspliced-genomic expressed protein| Length = 2102 Score = 30.4 bits (60), Expect(2) = 4.5 Identities = 11/18 (61%), Positives = 13/18 (72%) Frame = +1 / +1 Query: 187 WRIPTRTASRDTRLPCTG 240 WRIP+R +S RL CTG Sbjct: 856 WRIPSRRSSGRRRLQCTG 909 Score = 23.5 bits (45), Expect(2) = 4.5 Identities = 10/37 (27%), Positives = 18/37 (48%) Frame = +2 / +2 Query: 278 *ESQLFIQQ*WREEPCSFTKEPSSNYPS*CFCQQCSK 388 *+ Q+F + W+ + C S++PS CS+ Sbjct: 1559 *QQQVFARSEWQHKQCKMIGYSFSSWPSSDGVYHCSR 1669
>LOC_Os08g29560:12008.t02711:unspliced-genomic retrotransposon protein, putative, unclassified, expressed| Length = 5390 Score = 28.1 bits (55), Expect(2) = 5.6 Identities = 12/33 (36%), Positives = 18/33 (54%) Frame = +3 / -1 Query: 426 CSASEASQLLSERWAAAMNMYNDPNDSPDKPVM 524 C+ S +S LL R A +NDPN + D ++ Sbjct: 1421 CAQSISSFLLYNRGALTQEDHNDPNQTIDASIL 1323 Score = 26.7 bits (52), Expect(2) = 5.6 Identities = 10/26 (38%), Positives = 14/26 (53%) Frame = +2 / -2 Query: 176 SCCHGGYQPGQHQEIHASRAQESCKQ 253 SCCH + P + + IH+ SC Q Sbjct: 2911 SCCHYCFTPQEFRYIHSIHQ*ASCLQ 2834
>LOC_Os01g54080:12001.t04825:unspliced-genomic ATP binding protein, putative, expressed| Length = 7434 Score = 32.2 bits (64), Expect = 5.8 Identities = 13/32 (40%), Positives = 18/32 (56%) Frame = +3 / +2 Query: 768 PIFSLT*GCLVSLKWEQQSKSFLPVALRMEGK 863 P FSL CL+ WE + +SF+P L + K Sbjct: 518 PFFSLHLACLLFFAWEVKMRSFVPKMLFCDSK 613
>LOC_Os09g18490:12009.t01634:unspliced-genomic transposon protein, putative, CACTA, En/Spm sub-class| Length = 3753 Score = 32.2 bits (64), Expect = 5.8 Identities = 13/31 (41%), Positives = 15/31 (48%) Frame = -2 / +2 Query: 108 PPPAQPGCRPLSSTLRLRALPCPTLTRDAKE 16 PPP P C P R R +P P TR K+ Sbjct: 1934 PPPPPPPCPPAPPKTRSRQVPPPASTRATKK 2026
>LOC_Os05g40440:12005.t03583:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 4045 Score = 32.2 bits (64), Expect = 5.8 Identities = 14/38 (36%), Positives = 21/38 (55%) Frame = -1 / -3 Query: 322 WLFSPSLLYE*LAFSALSPALRRLFARFLCTGGVYLLM 209 W+F+ L+ L+FS + LRR +F GG Y L+ Sbjct: 773 WIFNEEELFLQLSFSCFNSLLRRSSQKFRILGGCYKLV 660
>LOC_Os05g29820:12005.t02582:unspliced-genomic transposon protein, putative, CACTA, En/Spm sub-class| Length = 3644 Score = 32.2 bits (64), Expect = 5.8 Identities = 13/31 (41%), Positives = 14/31 (45%) Frame = -2 / +2 Query: 108 PPPAQPGCRPLSSTLRLRALPCPTLTRDAKE 16 PPP P C P R R P P TR K+ Sbjct: 1811 PPPPPPPCPPAPPKTRSRQAPSPARTRATKK 1903
>LOC_Os04g50920:12004.t04570:unspliced-genomic WRKY DNA binding domain containing protein, expressed| Length = 4057 Score = 32.2 bits (64), Expect = 5.8 Identities = 11/15 (73%), Positives = 12/15 (80%) Frame = -2 / -1 Query: 114 FLPPPAQPGCRPLSS 70 FLPPP+ PGC P SS Sbjct: 2047 FLPPPSAPGCTPPSS 2003
>LOC_Os04g03710:12004.t00260:unspliced-genomic transposon protein, putative, CACTA, En/Spm sub-class| Length = 9186 Score = 32.2 bits (64), Expect = 5.8 Identities = 13/31 (41%), Positives = 14/31 (45%) Frame = -2 / +1 Query: 108 PPPAQPGCRPLSSTLRLRALPCPTLTRDAKE 16 PPP P C P R R P P TR K+ Sbjct: 1879 PPPPPPPCPPAPPKTRSRQAPLPASTRATKK 1971
>LOC_Os03g43950:12003.t03786:unspliced-genomic hypothetical protein| Length = 324 Score = 32.2 bits (64), Expect = 5.8 Identities = 11/18 (61%), Positives = 13/18 (72%) Frame = -2 / -3 Query: 108 PPPAQPGCRPLSSTLRLR 55 PPP P CRP S T++LR Sbjct: 217 PPPVPPLCRPTSPTMKLR 164
>LOC_Os02g33420:12002.t02985:unspliced-genomic ATPase, AAA family protein, expressed| Length = 4552 Score = 32.2 bits (64), Expect = 5.8 Identities = 16/38 (42%), Positives = 20/38 (52%) Frame = +2 / +1 Query: 572 SSSDELP*RSASCGRCSNRPGSGAQHLELIKVKLLQWS 685 SS+ P S GR S+RP SG +HL + QWS Sbjct: 199 SSAAAAPLVHRSHGRASSRPRSGGKHLRAGHLSSSQWS 312
>LOC_Os01g20080:12001.t01796:unspliced-genomic transposon protein, putative, CACTA, En/Spm sub-class| Length = 2119 Score = 32.2 bits (64), Expect = 5.8 Identities = 13/31 (41%), Positives = 14/31 (45%) Frame = -2 / +2 Query: 108 PPPAQPGCRPLSSTLRLRALPCPTLTRDAKE 16 PPP P C P R R P P TR K+ Sbjct: 1406 PPPLPPPCPPAPPKTRSRQAPLPARTRATKK 1498
>LOC_Os11g36280:12011.t03175:unspliced-genomic transposon protein, putative, CACTA, En/Spm sub-class| Length = 12369 Score = 31.3 bits (62), Expect(2) = 6.3 Identities = 13/31 (41%), Positives = 14/31 (45%) Frame = -2 / +1 Query: 108 PPPAQPGCRPLSSTLRLRALPCPTLTRDAKE 16 PPP P C P R P PT TR K+ Sbjct: 10531 PPPPPPPCPPAPPKTRSHQAPPPTRTRATKK 10623 Score = 24.4 bits (47), Expect(2) = 6.3 Identities = 8/18 (44%), Positives = 10/18 (55%) Frame = -1 / +2 Query: 451 SCEASLAEHPSNGTNLAW 398 SC+A A HP+ L W Sbjct: 2240 SCQAITAGHPTESKGLKW 2293
>LOC_Os09g10220:12009.t00814:unspliced-genomic transposon protein, putative, CACTA, En/Spm sub-class| Length = 8784 Score = 31.3 bits (62), Expect(2) = 6.4 Identities = 13/31 (41%), Positives = 14/31 (45%) Frame = -2 / +2 Query: 108 PPPAQPGCRPLSSTLRLRALPCPTLTRDAKE 16 PPP P C P R R P P TR K+ Sbjct: 6938 PPPPPPPCLPTPPKTRSRQAPPPARTRATKK 7030 Score = 24.0 bits (46), Expect(2) = 6.4 Identities = 7/18 (38%), Positives = 10/18 (55%) Frame = -1 / +1 Query: 451 SCEASLAEHPSNGTNLAW 398 SC+A + HP+ L W Sbjct: 1723 SCQAIIVGHPTESMELKW 1776
>LOC_Os01g25402:12001.t02257:unspliced-genomic transposon protein, putative, CACTA, En/Spm sub-class| Length = 9150 Score = 31.3 bits (62), Expect(2) = 6.6 Identities = 13/31 (41%), Positives = 14/31 (45%) Frame = -2 / +1 Query: 108 PPPAQPGCRPLSSTLRLRALPCPTLTRDAKE 16 PPP P C P R R P P TR K+ Sbjct: 7330 PPPPPPPCPPAPPKTRSRQAPPPASTRATKK 7422 Score = 24.0 bits (46), Expect(2) = 6.6 Identities = 7/18 (38%), Positives = 10/18 (55%) Frame = -1 / +2 Query: 451 SCEASLAEHPSNGTNLAW 398 SC+A + HP+ L W Sbjct: 188 SCQAIIVGHPTESKGLKW 241
>LOC_Os04g30410:12004.t02727:unspliced-genomic hypothetical protein| Length = 3610 Score = 31.8 bits (63), Expect = 8.0 Identities = 11/17 (64%), Positives = 11/17 (64%) Frame = +3 / +2 Query: 864 HCRVMYLSQWVLDYSPS 914 HCRV Y SQWVL S Sbjct: 722 HCRVFYFSQWVLQVKTS 772
>LOC_Os06g19980:12006.t01815:unspliced-genomic myb-like DNA-binding domain containing protein, expressed| Length = 8144 Score = 31.8 bits (63), Expect = 8.0 Identities = 13/32 (40%), Positives = 18/32 (56%) Frame = +2 / +3 Query: 686 ATDLSEASYFSSSMCVQFRLKTICMISPNF*S 781 + ++S Y S+C Q + IC SPNF*S Sbjct: 2577 SVNISPQIYLECSVCAQGSTELICRASPNF*S 2672
>LOC_Os04g05880:12004.t00469:unspliced-genomic transposon protein, putative, CACTA, En/Spm sub-class| Length = 13129 Score = 31.8 bits (63), Expect = 8.0 Identities = 13/31 (41%), Positives = 14/31 (45%) Frame = -2 / +2 Query: 108 PPPAQPGCRPLSSTLRLRALPCPTLTRDAKE 16 PPP P C P R R P P TR K+ Sbjct: 12533 PPPPPPPCPPAPPNTRSRQTPPPASTRATKK 12625
>LOC_Os03g42650:12003.t03666:unspliced-genomic vegetative storage protein, putative, expressed| Length = 7255 Score = 31.8 bits (63), Expect = 8.0 Identities = 13/24 (54%), Positives = 13/24 (54%) Frame = -2 / +2 Query: 99 AQPGCRPLSSTLRLRALPCPTLTR 28 A PGCR L RL LPC L R Sbjct: 1919 AHPGCRRLERAPRLPGLPCSALRR 1990
>LOC_Os02g14170:12002.t01213:unspliced-genomic peroxidase precursor, putative, expressed| Length = 1572 Score = 31.8 bits (63), Expect = 8.0 Identities = 14/35 (40%), Positives = 16/35 (45%) Frame = +2 / +3 Query: 527 RWIWRIVVGSRSHETSSSDELP*RSASCGRCSNRP 631 RW WR G S+ P +ASCGR RP Sbjct: 210 RWRWRRARGRSCRRGSTRRAAPPCTASCGRSCRRP 314
>LOC_Os02g04710:12002.t00369:unspliced-genomic cycloartenol synthase, putative, expressed| Length = 8874 Score = 31.8 bits (63), Expect = 8.0 Identities = 11/20 (55%), Positives = 14/20 (70%) Frame = -1 / +3 Query: 856 SIRKATGRNDFDCCSHFRET 797 S++K GR+ F CC H RET Sbjct: 3522 SLQKKVGRSFFSCCRHKRET 3581
>LOC_Os10g42520:12010.t03478:unspliced-genomic hypothetical protein| Length = 1129 Score = 26.7 bits (52), Expect(2) = 8.5 Identities = 12/32 (37%), Positives = 20/32 (62%) Frame = +2 / +3 Query: 671 LLQWSATDLSEASYFSSSMCVQFRLKTICMIS 766 LL + DLS +++ ++ + QF TIC+IS Sbjct: 687 LLSFLPWDLSNSNHSTTRLRWQFNSATICIIS 782 Score = 25.4 bits (49), Expect(2) = 8.5 Identities = 10/25 (40%), Positives = 14/25 (56%) Frame = +3 / +2 Query: 489 NDPNDSPDKPVMYAGSGGSSWGQGH 563 N P + P P +AG+G S +GH Sbjct: 263 NQPPNPPLLPYRFAGAGRRSHPRGH 337
>LOC_Os07g44730:12007.t04113:unspliced-genomic S-adenosylmethionine-dependent methyltransferase/| methyltransferase, putative, expressed Length = 4451 Score = 30.4 bits (60), Expect(2) = 8.6 Identities = 12/27 (44%), Positives = 16/27 (59%) Frame = -2 / -2 Query: 111 LPPPAQPGCRPLSSTLRLRALPCPTLT 31 LPPP P PL++ R R+ P P +T Sbjct: 127 LPPPPFPSSLPLAARSRCRSPPSPPVT 47 Score = 23.5 bits (45), Expect(2) = 8.6 Identities = 8/19 (42%), Positives = 12/19 (63%) Frame = -1 / -3 Query: 979 FFFEYIQTIYSLNRIQLLL 923 FFF QTI+ +NR + + Sbjct: 1932 FFFIICQTIFGINRCNIYI 1876
>LOC_Os03g03830:12003.t00264:unspliced-genomic calcium ion binding protein, putative, expressed| Length = 7874 Score = 25.8 bits (50), Expect(2) = 9.0 Identities = 9/22 (40%), Positives = 13/22 (59%) Frame = -2 / -1 Query: 336 LVKEHGSSLHHCCMNSWLSQPY 271 L+ +L CC +SWLS P+ Sbjct: 1103 LINPGSLALK*CCWSSWLSWPH 1038 Score = 22.6 bits (43), Expect(2) = 9.0 Identities = 9/17 (52%), Positives = 10/17 (58%) Frame = -1 / -1 Query: 451 SCEASLAEHPSNGTNLA 401 SC S SNGTN+A Sbjct: 1202 SCSWSSLRETSNGTNIA 1152 Database: tigr.seq.out Posted date: Jul 20, 2007 8:58 AM Number of letters in database: 166,841,660 Number of sequences in database: 56,278 Lambda K H 0.318 0.134 0.401 Matrix: BLOSUM62 Number of Sequences: 56278 Number of Hits to DB: 403,502,564 Number of extensions: 6751314 Number of successful extensions: 25518 Number of sequences better than 10.0: 40 Length of query: 328 Length of database: 55,613,886 Length adjustment: 50 Effective length of query: 278 Effective length of database: 52,799,986 Effective search space: 14678396108 Effective search space used: 14678396108 Neighboring words threshold: 13 Window for multiple hits: 40 X1: 16 ( 7.3 bits)
