| Clone Name | FLbaf138i12 |
|---|---|
| Clone Library Name | barley_pub |
>LOC_Os03g55730:12003.t04833:unspliced-genomic seven transmembrane domain protein, putative, expressed| Length = 6295 Score = 103 bits (220), Expect(10) = e-116 Identities = 40/45 (88%), Positives = 43/45 (95%) Frame = +1 / +3 Query: 436 GWAFADSVLHRLAPLWIGARGLEFTWEYIFQGLEANANLVMTLSL 570 GWAFADSVLHRLAPLWIGARGLEFTWEYIFQGLEANANLV +++ Sbjct: 4656 GWAFADSVLHRLAPLWIGARGLEFTWEYIFQGLEANANLVCFINI 4790 Score = 99.6 bits (211), Expect(10) = e-116 Identities = 41/41 (100%), Positives = 41/41 (100%) Frame = +1 / +3 Query: 676 SYLRRSLEWQTPKVVGFELFSSLVMAFISWQLFSACQRPM* 798 SYLRRSLEWQTPKVVGFELFSSLVMAFISWQLFSACQRPM* Sbjct: 5811 SYLRRSLEWQTPKVVGFELFSSLVMAFISWQLFSACQRPM* 5933 Score = 96.4 bits (204), Expect(10) = e-116 Identities = 41/44 (93%), Positives = 42/44 (95%) Frame = +1 / +2 Query: 553 VMTLSLAALGSLMWLRKNKPRTLIPIIYACALLLATMPSITSYL 684 VMTLSLAALGSLMWLRKNKPRTL+PIIYACALLLATMPSIT L Sbjct: 4964 VMTLSLAALGSLMWLRKNKPRTLVPIIYACALLLATMPSITRLL 5095 Score = 95.5 bits (202), Expect(10) = e-116 Identities = 39/42 (92%), Positives = 40/42 (95%) Frame = +1 / +3 Query: 313 PYQEIMKILIGFIDVAGLYFALTQLTHRNISQNHKFQAVGLG 438 P QE+MKI IGFIDVAGLYFALTQLTHRNISQNHKFQAVGLG Sbjct: 3939 PLQELMKIFIGFIDVAGLYFALTQLTHRNISQNHKFQAVGLG 4064 Score = 68.9 bits (144), Expect(10) = e-116 Identities = 26/27 (96%), Positives = 26/27 (96%) Frame = +1 / +1 Query: 109 EMTVFHFLNCAVLTFGPHVVYYSATPL 189 EMTVFHFLNCA LTFGPHVVYYSATPL Sbjct: 112 EMTVFHFLNCAALTFGPHVVYYSATPL 192 Score = 49.2 bits (101), Expect(10) = e-116 Identities = 21/24 (87%), Positives = 22/24 (91%) Frame = +1 / +1 Query: 190 SEYDTIGTSVKAAVVYLGAALVKL 261 SEYDTIGT VKAAVVYLG ALVK+ Sbjct: 3172 SEYDTIGTCVKAAVVYLGTALVKV 3243 Score = 27.2 bits (53), Expect(10) = e-116 Identities = 10/13 (76%), Positives = 12/13 (92%) Frame = +1 / +2 Query: 256 KLVCLATFLKVPD 294 +LVCLAT LKVP+ Sbjct: 3800 QLVCLATLLKVPE 3838 Score = 25.4 bits (49), Expect(10) = e-116 Identities = 7/13 (53%), Positives = 9/13 (69%) Frame = +3 / +1 Query: 906 HHYLWGFSCRTFY 944 H+ WGF RT+Y Sbjct: 6025 HYLFWGFDHRTYY 6063 Score = 24.4 bits (47), Expect(10) = e-116 Identities = 8/8 (100%), Positives = 8/8 (100%) Frame = +1 / +2 Query: 298 NDSFDPYQ 321 NDSFDPYQ Sbjct: 3839 NDSFDPYQ 3862 Score = 23.5 bits (45), Expect(10) = e-116 Identities = 12/21 (57%), Positives = 14/21 (66%) Frame = +3 / +1 Query: 843 PEMSLVVLGQN*NAA*SLCHY 905 PEM+ VVL QN*+A HY Sbjct: 5968 PEMAPVVLPQN*DAPFQP*HY 6030 Score = 96.4 bits (204), Expect(8) = 4e-94 Identities = 34/41 (82%), Positives = 37/41 (90%) Frame = -1 / -1 Query: 675 GDRWHCCQKQSTCINYWN*SPRFVLPQPHQGS*CSKGEGHH 553 GDRWHCCQKQSTCINYW+ SPRFV PQPHQGS* SKG+ H+ Sbjct: 5086 GDRWHCCQKQSTCINYWHQSPRFVFPQPHQGS*SSKGQRHN 4964 Score = 86.3 bits (182), Expect(8) = 4e-94 Identities = 37/48 (77%), Positives = 40/48 (83%) Frame = -2 / -1 Query: 818 ALLCFVDYIGLWQAENSCQLMKAITSEEKSSKPTTLGVCHSNDLRK*L 675 A+ + YIGL QAENSCQLMKA+TSEE SSKPTT GVCHSNDL K*L Sbjct: 5953 AICKLIPYIGL*QAENSCQLMKAMTSEENSSKPTTFGVCHSNDLLK*L 5810 Score = 80.8 bits (170), Expect(8) = 4e-94 Identities = 35/40 (87%), Positives = 35/40 (87%) Frame = -2 / -1 Query: 554 TRLAFASSPWNMYSQVNSSPRAPIQRGASRCRTESAKAQP 435 TRLAFASSP MYS VNSSP APIQRGA RCRTESAKAQP Sbjct: 4774 TRLAFASSP*KMYSHVNSSPLAPIQRGARRCRTESAKAQP 4655 Score = 78.0 bits (164), Expect(8) = 4e-94 Identities = 34/39 (87%), Positives = 35/39 (89%) Frame = -2 / -1 Query: 437 PRPTAWNLWFWEMFLWVNCVKAK*RPATSINPIRIFIIS 321 PRPTA NL FWEMFL VNCVKAK*RPATSINPI+IFI S Sbjct: 4063 PRPTA*NL*FWEMFL*VNCVKAK*RPATSINPIKIFINS 3947 Score = 58.8 bits (122), Expect(8) = 4e-94 Identities = 24/25 (96%), Positives = 24/25 (96%) Frame = -2 / -3 Query: 185 GVAE**TTWGPKVRTAQLRKWNTVI 111 GVAE**TTWGPKVR AQLRKWNTVI Sbjct: 188 GVAE**TTWGPKVRAAQLRKWNTVI 114 Score = 48.7 bits (100), Expect(8) = 4e-94 Identities = 21/24 (87%), Positives = 22/24 (91%) Frame = -2 / -3 Query: 260 SFTSAAPR*TTAAFTLVPIVSYSD 189 +FTSA PR*TTAAFT VPIVSYSD Sbjct: 3242 TFTSAVPR*TTAAFTQVPIVSYSD 3171 Score = 26.3 bits (51), Expect(8) = 4e-94 Identities = 11/21 (52%), Positives = 13/21 (61%) Frame = -1 / -1 Query: 903 SGKGSKQHSNFAQVQQETSRE 841 S K K H N +VQQE S+E Sbjct: 6028 SVKAEKAHPNSVEVQQEPSQE 5966 Score = 26.3 bits (51), Expect(8) = 4e-94 Identities = 11/12 (91%), Positives = 11/12 (91%) Frame = -2 / -2 Query: 293 SGTLRNVAKQTS 258 SGTL NVAKQTS Sbjct: 3837 SGTLSNVAKQTS 3802 Score = 84.5 bits (178), Expect(7) = 2e-69 Identities = 38/45 (84%), Positives = 40/45 (88%) Frame = -2 / -2 Query: 686 RK*LVIDGIVARSRAHA*IIGIKVLGLFFLSHIKDPNAARERVIT 552 R LVIDGIVARS+AHA*IIG KVLGLFFLSHIKDP AAR+ VIT Sbjct: 5097 RSNLVIDGIVARSKAHA*IIGTKVLGLFFLSHIKDPKAARDSVIT 4963 Score = 75.3 bits (158), Expect(7) = 2e-69 Identities = 30/40 (75%), Positives = 35/40 (87%) Frame = -1 / -3 Query: 438 TKTNSLELMVLGDVSVGQLCQSKIKASNIYKPN*NFHYFL 319 TKTN L+L++LGDVS+ QLCQSKIK SNIYKPN +FH FL Sbjct: 4064 TKTNCLKLVILGDVSMSQLCQSKIKTSNIYKPNKDFHQFL 3945 Score = 71.6 bits (150), Expect(7) = 2e-69 Identities = 30/38 (78%), Positives = 32/38 (84%) Frame = -1 / -3 Query: 549 IGICFKSLEYVLPSKFKPSCPNPERCQPVQN*ISKSPT 436 IGICFKSL+ VLP KFK SC NPER Q VQN*+SKSPT Sbjct: 4769 IGICFKSLKNVLPRKFKSSCTNPERRQTVQN*VSKSPT 4656 Score = 67.0 bits (140), Expect(7) = 2e-69 Identities = 29/40 (72%), Positives = 33/40 (82%) Frame = -1 / -3 Query: 798 LHWPLASREQLPADESHNQRGEELKADHLGSLPLQRSPQV 679 LHW L S EQLPADESH+Q GE+L+A+HL SLPL SPQV Sbjct: 5933 LHWSLTS*EQLPADESHDQ*GEQLEANHLWSLPL**SPQV 5814 Score = 48.7 bits (100), Expect(7) = 2e-69 Identities = 22/38 (57%), Positives = 26/38 (68%) Frame = -1 / -2 Query: 303 IIRIRYFEECC*TNKLYKCCSKINNSCFYTSANRVIL* 190 +I + Y ++ LY CCSKINNS FYTSAN VIL* Sbjct: 3285 VINLYYSKDIFLATDLY*CCSKINNSRFYTSANCVIL* 3172 Score = 25.8 bits (50), Expect(7) = 2e-69 Identities = 11/22 (50%), Positives = 15/22 (68%) Frame = -2 / -2 Query: 905 VVAKALSSILILPKYNKRHLGS 840 +V++ ILIL KYN+ HL S Sbjct: 6030 IVSRLKRRILILWKYNRSHLRS 5965 Score = 24.9 bits (48), Expect(7) = 2e-69 Identities = 9/9 (100%), Positives = 9/9 (100%) Frame = -1 / -2 Query: 138 AVEEVEHRH 112 AVEEVEHRH Sbjct: 141 AVEEVEHRH 115 Score = 87.7 bits (185), Expect(6) = 7e-61 Identities = 33/41 (80%), Positives = 37/41 (90%) Frame = +3 / +1 Query: 558 DPLPCCIRILDVAEEEQT*DFNSNNLCMCSASGNNAIYHQL 680 D +PCC RILDVAEE+QT*DF +NNLCMC ASGNNAIYHQ+ Sbjct: 4969 DAVPCCFRILDVAEEKQT*DFGANNLCMCFASGNNAIYHQV 5091 Score = 78.5 bits (165), Expect(6) = 7e-61 Identities = 28/39 (71%), Positives = 29/39 (74%) Frame = +3 / +2 Query: 321 GNNENSNWVYRCCWPLFCFDTVDPQKHLPEP*VPGCWSW 437 G +EN WVYRCCW LFCFDTVD KHLPE V G WSW Sbjct: 3947 GIDENLYWVYRCCWSLFCFDTVDS*KHLPESQVSGSWSW 4063 Score = 69.8 bits (146), Expect(6) = 7e-61 Identities = 29/38 (76%), Positives = 31/38 (81%) Frame = +3 / +2 Query: 438 LGFC*FSSAPAGTSLDWGTRA*IYLGVHIPRT*SKCQS 551 LGFC* SSAP+G SLDW R *IY+GVH RT*SKCQS Sbjct: 4658 LGFC*LSSAPSGASLDWCKRT*IYVGVHFSRT*SKCQS 4771 Score = 46.0 bits (94), Expect(6) = 7e-61 Identities = 23/48 (47%), Positives = 26/48 (54%) Frame = +3 / +2 Query: 675 QLLAEIVGVADSQXXXXXXXXXXXXXFHQLAAVLCLPEANVINKTKQC 818 QLL EI+ VADS+ FHQLAAVL L E NV N+ C Sbjct: 5810 QLLEEIIRVADSKGGWLRAVLLTGHGFHQLAAVLSLSETNVRNEFANC 5953 Score = 40.9 bits (83), Expect(6) = 7e-61 Identities = 18/20 (90%), Positives = 20/20 (100%) Frame = +2 / +2 Query: 191 QSMTRLALV*KQLLFILEQH 250 QSMT+LALV*K+LLFILEQH Sbjct: 3173 QSMTQLALV*KRLLFILEQH 3232 Score = 25.8 bits (50), Expect(6) = 7e-61 Identities = 9/9 (100%), Positives = 9/9 (100%) Frame = +3 / +3 Query: 108 RDDGVPLPQ 134 RDDGVPLPQ Sbjct: 111 RDDGVPLPQ 137 Score = 72.1 bits (151), Expect(5) = 2e-39 Identities = 33/41 (80%), Positives = 35/41 (85%) Frame = -3 / -3 Query: 679 SW**MALLPEAEHMHKLLELKS*VCSSSATSRILMQQGRGS 557 +W**MALLPEA+HMHKLL KS*VC SSATSRIL QQG S Sbjct: 5090 TW**MALLPEAKHMHKLLAPKS*VCFSSATSRILKQQGTAS 4968 Score = 69.8 bits (146), Expect(5) = 2e-39 Identities = 29/38 (76%), Positives = 31/38 (81%) Frame = -3 / -2 Query: 550 DWHLLQVLGICTPK*IQALVPQSREVPAGAELNQQKPN 437 DWHLLQVL CTP *IQ L+ QSRE P GAEL+QQKPN Sbjct: 4770 DWHLLQVLEKCTPT*IQVLLHQSREAPDGAELSQQKPN 4657 Score = 63.4 bits (132), Expect(5) = 2e-39 Identities = 29/47 (61%), Positives = 31/47 (65%) Frame = -3 / -2 Query: 454 NQQKPNQDQQPGTYGSGRCFCGSTVSKQNKGQQHL*TQLEFSLFPGR 314 N +QDQ P T SGRCF STVSKQNK QQHL*TQ FS P + Sbjct: 4080 NGGNTHQDQLPETCDSGRCFYESTVSKQNKDQQHL*TQ*RFSSIPAK 3940 Score = 25.8 bits (50), Expect(5) = 2e-39 Identities = 10/15 (66%), Positives = 12/15 (80%) Frame = -1 / -1 Query: 300 IRIRYFEECC*TNKL 256 I +RYFE+C * NKL Sbjct: 3844 IILRYFEQCR*ANKL 3800 Score = 24.0 bits (46), Expect(5) = 2e-39 Identities = 12/16 (75%), Positives = 13/16 (81%) Frame = -3 / -2 Query: 799 ITLASGKQRTAAS**K 752 +TL S K RTAAS**K Sbjct: 5934 LTLVSDKLRTAAS**K 5887 Score = 81.3 bits (171), Expect(4) = 5e-26 Identities = 33/37 (89%), Positives = 34/37 (91%) Frame = +2 / +3 Query: 566 PLLH*DP*CG*GRTNLGL*FQ*FMHVLCFWQQCHLSP 676 PLL *DP*CG*G+TNLGL Q*FMHVLCFWQQCHLSP Sbjct: 4977 PLLL*DP*CG*GKTNLGLWCQ*FMHVLCFWQQCHLSP 5087 Score = 58.3 bits (121), Expect(4) = 5e-26 Identities = 24/32 (75%), Positives = 25/32 (78%) Frame = +2 / +1 Query: 455 QFCTGWHLSGLGHEGLNLLGSTYSKDLKQMPI 550 QFCT W LSGL E LNL GST+ KDLKQMPI Sbjct: 4675 QFCTVWRLSGLVQEDLNLRGSTFFKDLKQMPI 4770 Score = 25.4 bits (49), Expect(4) = 5e-26 Identities = 11/31 (35%), Positives = 18/31 (58%) Frame = +2 / +3 Query: 221 KQLLFILEQHL*SLFV*QHSSKYLMRMIALI 313 K+++ L SLF *+H SKYL + ++ Sbjct: 3765 KEIILTLTNLTDSLFA*RHCSKYLRMIALIL 3857 Score = 23.5 bits (45), Expect(4) = 5e-26 Identities = 8/13 (61%), Positives = 9/13 (69%) Frame = +2 / +1 Query: 764 GSCSLLARGQCNQ 802 GSCS L R QC + Sbjct: 5899 GSCSQLVRDQCKE 5937
>LOC_Os01g62850:12001.t05658:unspliced-genomic expressed protein| Length = 2750 Score = 36.8 bits (74), Expect = 0.28 Identities = 21/51 (41%), Positives = 26/51 (50%) Frame = -2 / +1 Query: 575 AARERVITRLAFASSPWNMYSQVNSSPRAPIQRGASRCRTESAKAQPRPTA 423 AA ER R A S+ SSP AP + ASRC S+ + PRP+A Sbjct: 79 AASERAPARRAARVGSGGGRSR*GSSPAAPGRGAASRCGWGSSSSPPRPSA 231
>LOC_Os03g05360:12003.t00408:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 12647 Score = 35.9 bits (72), Expect = 0.54 Identities = 14/32 (43%), Positives = 20/32 (62%) Frame = -2 / -1 Query: 527 WNMYSQVNSSPRAPIQRGASRCRTESAKAQPR 432 W++ S+ +SSPR+P +RG CR A PR Sbjct: 8588 WSVTSRRSSSPRSPSRRGRRPCRRRLAALPPR 8493
>LOC_Os07g27170:12007.t02411:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 6251 Score = 35.4 bits (71), Expect = 0.74 Identities = 13/31 (41%), Positives = 16/31 (51%) Frame = +3 / -1 Query: 312 SLPGNNENSNWVYRCCWPLFCFDTVDPQKHL 404 SLP +N +S W Y CW LF +HL Sbjct: 5765 SLPSSNHSSPWSYTLCWQLFVTSRQARSQHL 5673
>LOC_Os10g16900:12010.t01252:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 5697 Score = 34.5 bits (69), Expect = 1.4 Identities = 13/39 (33%), Positives = 19/39 (48%) Frame = +3 / -1 Query: 324 NNENSNWVYRCCWPLFCFDTVDPQKHLPEP*VPGCWSWL 440 N + + + RCC L C VD P P PG W+++ Sbjct: 2355 NRKRTQYDLRCCLCLLCRRVVDTSLDKPWPGTPGLWAFV 2239
>LOC_Os05g43510:12005.t03841:unspliced-genomic tyrosine/DOPA decarboxylase 1, putative, expressed| Length = 1892 Score = 34.5 bits (69), Expect = 1.4 Identities = 13/27 (48%), Positives = 17/27 (62%) Frame = -2 / -2 Query: 497 PRAPIQRGASRCRTESAKAQPRPTAWN 417 PRAP +R R RT A+ P P+AW+ Sbjct: 874 PRAPTRRAPPRRRTARAEGPPPPSAWS 794
>LOC_Os02g21070:12002.t01897:unspliced-genomic conserved hypothetical protein| Length = 952 Score = 34.1 bits (68), Expect = 1.9 Identities = 14/36 (38%), Positives = 19/36 (52%) Frame = -2 / +3 Query: 536 SSPWNMYSQVNSSPRAPIQRGASRCRTESAKAQPRP 429 ++P S SSP +P + ASRC T S + P P Sbjct: 111 TAPSPRASSARSSPASPTRAAASRCSTSSRQTSPPP 218
>LOC_Os02g41930:12002.t03780:unspliced-genomic F-box domain containing protein| Length = 1197 Score = 33.6 bits (67), Expect = 2.6 Identities = 14/25 (56%), Positives = 16/25 (64%) Frame = -2 / -3 Query: 497 PRAPIQRGASRCRTESAKAQPRPTA 423 PRAP +R A+R T SA A P P A Sbjct: 1015 PRAPARRAAARLPTRSAPASPSPRA 941
>LOC_Os12g37980:12012.t03479:unspliced-genomic senescence-induced receptor-like serine/threonine-protein kinase| precursor, putative, expressed Length = 6946 Score = 33.6 bits (67), Expect = 2.6 Identities = 9/13 (69%), Positives = 10/13 (76%) Frame = -1 / -3 Query: 660 CCQKQSTCINYWN 622 CC KQ +C NYWN Sbjct: 4946 CCHKQQSCCNYWN 4908
>LOC_Os02g25830:12002.t02277:unspliced-genomic auxin response factor 31, putative| Length = 819 Score = 29.5 bits (58), Expect(2) = 3.5 Identities = 11/27 (40%), Positives = 18/27 (66%) Frame = -2 / -2 Query: 938 CSATEPPQIVMVVAKALSSILILPKYN 858 C+A P + V +A AL S+ +LP++N Sbjct: 593 CAAAHPKEAVACLAGAL*SLALLPRHN 513 Score = 24.0 bits (46), Expect(2) = 3.5 Identities = 11/31 (35%), Positives = 14/31 (45%) Frame = -1 / -3 Query: 672 DRWHCCQKQSTCINYWN*SPRFVLPQPHQGS 580 DR CC ++ C+ SP P P GS Sbjct: 373 DRTRCCGRRRRCLRL*GPSPWRSNPSPW*GS 281
>LOC_Os10g42750:12010.t03499:unspliced-genomic CSLD1 - cellulose synthase-like family D, expressed| Length = 3839 Score = 33.1 bits (66), Expect = 3.6 Identities = 15/38 (39%), Positives = 21/38 (55%) Frame = -2 / +2 Query: 548 LAFASSPWNMYSQVNSSPRAPIQRGASRCRTESAKAQP 435 LA SP + S SS R+P RG+S CR ++ + P Sbjct: 2792 LASTPSPPSSSSSTASSRRSPSSRGSSSCRRSTSPSSP 2905
>LOC_Os01g46880:12001.t04138:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 4048 Score = 33.1 bits (66), Expect = 3.6 Identities = 10/21 (47%), Positives = 15/21 (71%) Frame = +3 / -3 Query: 540 KCQSSDDPLPCCIRILDVAEE 602 KC SSDD + CCI+ D+ ++ Sbjct: 2924 KCSSSDDGIVCCIKFSDIKDD 2862
>LOC_Os08g30710:12008.t02823:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 3726 Score = 28.6 bits (56), Expect(2) = 4.1 Identities = 13/25 (52%), Positives = 15/25 (60%) Frame = -2 / -2 Query: 503 SSPRAPIQRGASRCRTESAKAQPRP 429 S PR P+ ASR SA A+PRP Sbjct: 347 SLPRCPVVPCASRLLFHSAHARPRP 273 Score = 26.7 bits (52), Expect(2) = 4.1 Identities = 9/17 (52%), Positives = 12/17 (70%) Frame = -1 / -2 Query: 660 CCQKQSTCINYWN*SPR 610 CCQ S+CIN+ SP+ Sbjct: 2672 CCQ*VSSCINFMRLSPK 2622
>LOC_Os05g11960:12005.t01026:unspliced-genomic hypothetical protein| Length = 3244 Score = 32.7 bits (65), Expect = 4.9 Identities = 10/32 (31%), Positives = 15/32 (46%) Frame = -2 / -3 Query: 488 PIQRGASRCRTESAKAQPRPTAWNLWFWEMFL 393 P SRCR E++ +P +W W W + Sbjct: 2759 PAASSCSRCRGEASSCRPIAPSWMAWCWNCLI 2664
>LOC_Os02g04380:12002.t005583:unspliced-genomic hypothetical protein| Length = 2507 Score = 32.7 bits (65), Expect = 4.9 Identities = 13/33 (39%), Positives = 20/33 (60%) Frame = -2 / -2 Query: 530 PWNMYSQVNSSPRAPIQRGASRCRTESAKAQPR 432 PWN SQV+++PR +R R R ++ + PR Sbjct: 724 PWNRGSQVDTAPRRRSRRRGRRARRDAG*SVPR 626
>LOC_Os01g12640:12001.t01130:unspliced-genomic expressed protein| Length = 1729 Score = 32.7 bits (65), Expect = 4.9 Identities = 13/26 (50%), Positives = 15/26 (57%) Frame = -2 / +3 Query: 497 PRAPIQRGASRCRTESAKAQPRPTAW 420 P Q G SRC + SA+A PRP W Sbjct: 1011 PAPACQPG*SRCASASARAGPRPPQW 1088
>LOC_Os04g52164:12004.t04692:unspliced-genomic transferase, putative, expressed| Length = 4244 Score = 32.7 bits (65), Expect = 5.0 Identities = 13/31 (41%), Positives = 18/31 (58%) Frame = +1 / +2 Query: 832 DLALPRCLLLYLGKIRMLLRAFATTITICGG 924 DL L RCL LG ++ ++ TI +CGG Sbjct: 2186 DLLLKRCLQTELGLRASIIMSYKPTINLCGG 2278
>LOC_Os12g41150:12012.t03792:unspliced-genomic hypothetical protein| Length = 1328 Score = 28.6 bits (56), Expect(2) = 5.4 Identities = 12/25 (48%), Positives = 14/25 (56%) Frame = -1 / +2 Query: 729 LKADHLGSLPLQRSPQVAGDRWHCC 655 L A + S P R+PQV GD W C Sbjct: 1235 LLAGRVPSWPG*RAPQVRGDHWRWC 1309 Score = 24.9 bits (48), Expect(2) = 5.4 Identities = 9/20 (45%), Positives = 12/20 (60%) Frame = -2 / +2 Query: 1100 CPCFSLKDATQLSKICDTCN 1041 C S AT+ ++ CDTCN Sbjct: 857 CQIPSQSAATEETRCCDTCN 916
>LOC_Os02g49260:12002.t04510:unspliced-genomic expressed protein| Length = 3905 Score = 25.8 bits (50), Expect(2) = 6.1 Identities = 12/33 (36%), Positives = 19/33 (57%) Frame = +1 / +2 Query: 856 LLYLGKIRMLLRAFATTITICGGSVAEHFTLFL 954 L+++GK R+L ++ + G AEHF L L Sbjct: 524 LVFMGKNRLLHGKYSVSKFRKGTEAAEHFLLVL 622 Score = 23.5 bits (45), Expect(2) = 6.1 Identities = 8/26 (30%), Positives = 13/26 (50%) Frame = +3 / +3 Query: 936 TFYFIFVGDRAETHDLMSPTVTEALV 1013 + +F+F D TH L+ + LV Sbjct: 603 SIFFLFFSDSRHTHSLLLEPILHLLV 680
>LOC_Os11g18290:12011.t01600:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 6402 Score = 30.9 bits (61), Expect(2) = 6.5 Identities = 11/49 (22%), Positives = 25/49 (51%) Frame = +1 / -2 Query: 628 IIYACALLLATMPSITSYLRRSLEWQTPKVVGFELFSSLVMAFISWQLF 774 ++ CA L+ + + + ++ W++ + F +F L ++ SW LF Sbjct: 1052 LVVTCASCLSAAIQVIAEIAGAVRWRSGSMRRFPVFRILTISIASWWLF 906 Score = 24.4 bits (47), Expect(2) = 6.5 Identities = 7/18 (38%), Positives = 11/18 (61%) Frame = +3 / -2 Query: 540 KCQSSDDPLPCCIRILDV 593 +C S +D + CCI D+ Sbjct: 2807 ECSSPNDGIVCCIEFSDI 2754
>LOC_Os05g08250:12005.t00705:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 2583 Score = 32.2 bits (64), Expect = 6.8 Identities = 14/36 (38%), Positives = 18/36 (50%) Frame = -2 / -1 Query: 539 ASSPWNMYSQVNSSPRAPIQRGASRCRTESAKAQPR 432 AS W Y + S +P Q ASRCR S ++ R Sbjct: 1743 ASRQWRRYDLADRSSSSPSQDVASRCRPRSPSSEGR 1636
>LOC_Os03g44980:12003.t03883:unspliced-genomic F-box domain containing protein| Length = 1545 Score = 32.2 bits (64), Expect = 6.8 Identities = 14/55 (25%), Positives = 25/55 (45%) Frame = -2 / +1 Query: 851 HLGSAKSPVNLALLCFVDYIGLWQAENSCQLMKAITSEEKSSKPTTLGVCHSNDL 687 + G ++ V LA L + +W + SC K + + + KP LG+ S + Sbjct: 928 YFGKSEKGVYLASLTIDGRLSIWVLDESCGQFKWVLEHQNNLKPLLLGLNRSKQV 1092
>LOC_Os03g23200:12003.t02066:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 7891 Score = 32.2 bits (64), Expect = 6.8 Identities = 14/40 (35%), Positives = 19/40 (47%) Frame = +3 / -1 Query: 324 NNENSNWVYRCCWPLFCFDTVDPQKHLPEP*VPGCWSWLG 443 N E + + RCC L C VD P P PG +++G Sbjct: 4657 NRERTQYDLRCCLCLLCRCVVDTSLDKPWPGTPGLRAFVG 4538
>LOC_Os05g01500:12005.t00051:unspliced-genomic tubulin-specific chaperone E, putative, expressed| Length = 5737 Score = 32.2 bits (64), Expect = 6.8 Identities = 19/50 (38%), Positives = 26/50 (52%) Frame = +1 / +1 Query: 736 SSLVMAFISWQLFSACQRPM*STKQSSARFTGDLALPRCLLLYLGKIRML 885 SS F+SW L SA RP+ TK++S + R L+YL K +L Sbjct: 5374 SSRKTRFLSWSLGSARDRPLSWTKKASLI*FTGILCVRFNLIYLSKFGVL 5523
>LOC_Os12g14510:12012.t01314:unspliced-genomic hypothetical protein| Length = 668 Score = 25.8 bits (50), Expect(2) = 7.0 Identities = 7/10 (70%), Positives = 9/10 (90%) Frame = -1 / +3 Query: 495 SCPNPERCQP 466 SCP+P RC+P Sbjct: 189 SCPSPRRCRP 218 Score = 23.5 bits (45), Expect(2) = 7.0 Identities = 6/15 (40%), Positives = 9/15 (60%) Frame = -2 / +2 Query: 443 AQPRPTAWNLWFWEM 399 A P +AW W+W + Sbjct: 239 APPGGSAWRRWWWRL 283
>LOC_Os01g45160:12001.t03975:unspliced-genomic conserved hypothetical protein| Length = 615 Score = 25.4 bits (49), Expect(2) = 7.1 Identities = 14/42 (33%), Positives = 21/42 (50%) Frame = -2 / +1 Query: 617 VLGLFFLSHIKDPNAARERVITRLAFASSPWNMYSQVNSSPR 492 V+G L+ +K P AA R + RLA + V ++PR Sbjct: 145 VVGCLTLALVKAPYAAGRRCVARLAAGKRRRMIRPGVATTPR 270 Score = 24.0 bits (46), Expect(2) = 7.1 Identities = 10/22 (45%), Positives = 14/22 (63%) Frame = -2 / +3 Query: 500 SPRAPIQRGASRCRTESAKAQP 435 +PR +RGA R + SA+A P Sbjct: 318 APRRRRRRGAGRAQAGSARAWP 383
>LOC_Os11g43260:12011.t03856:unspliced-genomic transposon protein, putative, CACTA, En/Spm sub-class| Length = 5650 Score = 31.8 bits (63), Expect = 9.3 Identities = 11/24 (45%), Positives = 16/24 (66%) Frame = +2 / -3 Query: 776 LLARGQCNQQNKAVLDLQEIWHSR 847 L+ G+C+Q N+A L E+WH R Sbjct: 3770 LVGAGECSQPNRASPCLLELWHGR 3699
>LOC_Os10g27180:12010.t02124:unspliced-genomic expressed protein| Length = 4714 Score = 31.8 bits (63), Expect = 9.3 Identities = 13/28 (46%), Positives = 16/28 (57%) Frame = +3 / +1 Query: 924 FSCRTFYFIFVGDRAETHDLMSPTVTEA 1007 F+C FYF FVG + H + PT T A Sbjct: 4567 FTCDRFYFYFVGSCIKIHVAVYPTYTFA 4650
>LOC_Os06g09820:12006.t00860:unspliced-genomic protein of unknown function containing protein, expressed| Length = 2588 Score = 31.8 bits (63), Expect = 9.3 Identities = 9/12 (75%), Positives = 10/12 (83%) Frame = +2 / +3 Query: 650 FWQQCHLSPATC 685 FW+QCHL PA C Sbjct: 1758 FWEQCHLFPAAC 1793
>LOC_Os05g31380:12005.t02735:unspliced-genomic GRAS family transcription factor containing protein| Length = 1656 Score = 31.8 bits (63), Expect = 9.3 Identities = 12/24 (50%), Positives = 14/24 (58%) Frame = -2 / +2 Query: 497 PRAPIQRGASRCRTESAKAQPRPT 426 P P RG++RC SA PRPT Sbjct: 500 PSPPRARGSARCARSSASPPPRPT 571
>LOC_Os02g58530:12002.t05423:unspliced-genomic major facilitator superfamily protein, expressed| Length = 1959 Score = 31.8 bits (63), Expect = 9.3 Identities = 11/29 (37%), Positives = 15/29 (51%) Frame = -2 / -3 Query: 506 NSSPRAPIQRGASRCRTESAKAQPRPTAW 420 +S PR P A RC ++ PRP+ W Sbjct: 1039 SSRPRPPWLAAARRCHRRRPRSSPRPSRW 953
>LOC_Os06g47294:12006.t04917:unspliced-genomic ankyrin like protein, putative, expressed| Length = 4371 Score = 31.8 bits (63), Expect = 9.4 Identities = 14/26 (53%), Positives = 18/26 (69%) Frame = +1 / +1 Query: 850 CLLLYLGKIRMLLRAFATTITICGGS 927 CLLL+L K R+LL + TT+ I GS Sbjct: 2245 CLLLHLLKYRILLSSLRTTVVILFGS 2322
>LOC_Os05g48930:12005.t04327:unspliced-genomic OsGrx_S2 - glutaredoxin subgroup III, expressed| Length = 945 Score = 31.8 bits (63), Expect = 9.4 Identities = 14/33 (42%), Positives = 16/33 (48%) Frame = -1 / -3 Query: 795 HWPLASREQLPADESHNQRGEELKADHLGSLPL 697 H P+ E+ PADE QR DH G L L Sbjct: 379 HEPVEPAEEPPADEHRRQRDAAAAGDHPGELGL 281
>LOC_Os01g11810:12001.t01051:unspliced-genomic expressed protein| Length = 3777 Score = 31.8 bits (63), Expect = 9.4 Identities = 9/21 (42%), Positives = 14/21 (66%) Frame = -1 / +3 Query: 669 RWHCCQKQSTCINYWN*SPRF 607 RWHC +++ C + W * P+F Sbjct: 1473 RWHCPSRRAGCGSQWK*RPKF 1535 Database: tigr.seq.out Posted date: Jul 20, 2007 8:58 AM Number of letters in database: 166,841,660 Number of sequences in database: 56,278 Lambda K H 0.318 0.134 0.401 Matrix: BLOSUM62 Number of Sequences: 56278 Number of Hits to DB: 443,728,437 Number of extensions: 7140208 Number of successful extensions: 27563 Number of sequences better than 10.0: 34 Length of query: 374 Length of database: 55,613,886 Length adjustment: 50 Effective length of query: 324 Effective length of database: 52,799,986 Effective search space: 17107195464 Effective search space used: 17107195464 Neighboring words threshold: 13 Window for multiple hits: 40 X1: 16 ( 7.3 bits)