ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf135o20 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK111009:Os09g0397700 | 241 | 4e-64 | 2 | AK108004:Os09g0397700 | 241 | 4e-64 | 3 | AK101174:Os02g0672600 | 32 | 0.59 | 4 | AK070286:Os02g0672600 | 32 | 0.59 | 5 | AK066154:Os03g0439800 | 31 | 1.0 | 6 | Os01g0722300:Os01g0722300 | 29 | 5.0 | 7 | Os02g0547100:Os02g0547100 | 29 | 5.0 | 8 | AK120773:Os08g0562200 | 28 | 8.5 | 9 | AK099629:Os08g0562200 | 28 | 8.5 |
|---|
>AK111009:Os09g0397700 | Length = 149 Score = 241 bits (616), Expect = 4e-64 Identities = 109/137 (79%), Positives = 115/137 (83%) Frame = +1 Query: 97 ASEPAVVHSGGCHCRRVRWQVEAPASVVAWICNCSDCSMRGNTHFVVPKDKFALQAGAAE 276 A+ VVHSGGCHC RVRW+ EAPASVV WICNCSDC+MRGN HFVVP KF L AGA E Sbjct: 4 AAAADVVHSGGCHCGRVRWRAEAPASVVVWICNCSDCAMRGNAHFVVPASKFTLAAGAGE 63 Query: 277 FLTTYTFGTHTAKHTFCKVCGITSFYIPRSNPDGFAVTAACIDPGTLAHVEYRKADGRNW 456 LTTYTFGTHTAKHTFC+VCGITSFY PRSNPDG AVTAAC+DPGTLAHVEYR ADGRNW Sbjct: 64 SLTTYTFGTHTAKHTFCRVCGITSFYTPRSNPDGVAVTAACVDPGTLAHVEYRHADGRNW 123 Query: 457 EDWIEGSGISEFSKPAA 507 E W S IS+FSKP A Sbjct: 124 EKWFSRSDISDFSKPKA 140
>AK108004:Os09g0397700 | Length = 149 Score = 241 bits (616), Expect = 4e-64 Identities = 109/137 (79%), Positives = 115/137 (83%) Frame = +1 Query: 97 ASEPAVVHSGGCHCRRVRWQVEAPASVVAWICNCSDCSMRGNTHFVVPKDKFALQAGAAE 276 A+ VVHSGGCHC RVRW+ EAPASVV WICNCSDC+MRGN HFVVP KF L AGA E Sbjct: 4 AAAADVVHSGGCHCGRVRWRAEAPASVVVWICNCSDCAMRGNAHFVVPASKFTLAAGAGE 63 Query: 277 FLTTYTFGTHTAKHTFCKVCGITSFYIPRSNPDGFAVTAACIDPGTLAHVEYRKADGRNW 456 LTTYTFGTHTAKHTFC+VCGITSFY PRSNPDG AVTAAC+DPGTLAHVEYR ADGRNW Sbjct: 64 SLTTYTFGTHTAKHTFCRVCGITSFYTPRSNPDGVAVTAACVDPGTLAHVEYRHADGRNW 123 Query: 457 EDWIEGSGISEFSKPAA 507 E W S IS+FSKP A Sbjct: 124 EKWFSRSDISDFSKPKA 140
>AK101174:Os02g0672600 | Length = 706 Score = 32.0 bits (71), Expect = 0.59 Identities = 25/83 (30%), Positives = 33/83 (39%) Frame = -2 Query: 545 PEPHTGHGRSYSAAAGLENSEMPLPSIQSSQFLPSAFLYSTCARVPGSMQAAVTAKPSGL 366 P P GHG+S +A +P P+ + + PGS A+V A P GL Sbjct: 70 PNPDGGHGKSPAALKPHHRRALPDPARSTRR-----------KTSPGSSPASVAAAPGGL 118 Query: 365 DLGM*NEVIPHTLQKVCLAVWVP 297 D T+ VCL VP Sbjct: 119 D-------AVRTMVAVCLLELVP 134
>AK070286:Os02g0672600 | Length = 706 Score = 32.0 bits (71), Expect = 0.59 Identities = 25/83 (30%), Positives = 33/83 (39%) Frame = -2 Query: 545 PEPHTGHGRSYSAAAGLENSEMPLPSIQSSQFLPSAFLYSTCARVPGSMQAAVTAKPSGL 366 P P GHG+S +A +P P+ + + PGS A+V A P GL Sbjct: 70 PNPDGGHGKSPAALKPHHRRALPDPARSTRR-----------KTSPGSSPASVAAAPGGL 118 Query: 365 DLGM*NEVIPHTLQKVCLAVWVP 297 D T+ VCL VP Sbjct: 119 D-------AVRTMVAVCLLELVP 134
>AK066154:Os03g0439800 | Length = 90 Score = 31.2 bits (69), Expect = 1.0 Identities = 18/45 (40%), Positives = 20/45 (44%) Frame = +1 Query: 550 QVIFRATDLIRTWSLLTPVEAREPLVTGCARREMVAQGIFNRFVW 684 QVIFR T R WSLL E + + GC E G F W Sbjct: 38 QVIFRGTFWARQWSLLLKEEDGQKVREGCLILEKRVSGFFAMKGW 82
>Os01g0722300:Os01g0722300 | Length = 298 Score = 28.9 bits (63), Expect = 5.0 Identities = 13/25 (52%), Positives = 18/25 (72%) Frame = -3 Query: 112 PPAPRPSLLVSWVEGEMGDMDELLL 38 PPAP +L + ++G +GD DELLL Sbjct: 153 PPAPLVNLDAAGLDGAVGDNDELLL 177
>Os02g0547100:Os02g0547100 | Length = 1737 Score = 28.9 bits (63), Expect = 5.0 Identities = 17/46 (36%), Positives = 23/46 (50%) Frame = +1 Query: 139 RRVRWQVEAPASVVAWICNCSDCSMRGNTHFVVPKDKFALQAGAAE 276 RR+R ++ S + CS C RG+T+ PKDK A AE Sbjct: 836 RRIRNDMDE--SEAGRVKRCSKCDERGHTYKYCPKDKEKPSAAEAE 879
>AK120773:Os08g0562200 | Length = 656 Score = 28.1 bits (61), Expect = 8.5 Identities = 16/46 (34%), Positives = 21/46 (45%) Frame = -1 Query: 681 YKPVEDTLSYHLSSGTPSNQRLPGFHGSEQGPRANQVSSPEDNLKS 544 Y P + L + G PS+ RLP E G + N V P+ KS Sbjct: 492 YSPTQKVLEPNFVVGAPSSARLP-----EAGSQLNYVVLPDSQTKS 532
>AK099629:Os08g0562200 | Length = 656 Score = 28.1 bits (61), Expect = 8.5 Identities = 16/46 (34%), Positives = 21/46 (45%) Frame = -1 Query: 681 YKPVEDTLSYHLSSGTPSNQRLPGFHGSEQGPRANQVSSPEDNLKS 544 Y P + L + G PS+ RLP E G + N V P+ KS Sbjct: 492 YSPTQKVLEPNFVVGAPSSARLP-----EAGSQLNYVVLPDSQTKS 532 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 22,645,628 Number of extensions: 517674 Number of successful extensions: 1722 Number of sequences better than 10.0: 9 Number of HSP's gapped: 1719 Number of HSP's successfully gapped: 9 Length of query: 295 Length of database: 15,399,855 Length adjustment: 100 Effective length of query: 195 Effective length of database: 11,395,755 Effective search space: 2222172225 Effective search space used: 2222172225 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
