| Clone Name | FLbaf135o20 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_001069641.1| Oryza sativa (japonica cultivar-group) Os09g0397700 (Os09g0397700) mRNA, complete cds Length = 775 Score = 381 bits (192), Expect = e-102 Identities = 336/384 (87%) Strand = Plus / Plus Query: 118 cacagcggcgggtgccactgccggcgcgtgcggtggcaggtggaggcgccggcgagcgtg 177 ||||||||||| ||||||||| |||| |||||||||| || ||||||||||||||||||| Sbjct: 59 cacagcggcggctgccactgcgggcgggtgcggtggcgggcggaggcgccggcgagcgtg 118 Query: 178 gtggcgtggatctgcaactgctccgactgctccatgcgggggaacacccatttcgtcgtg 237 |||| ||||||||||||||||||||||||| ||||||| |||||| |||| |||||||| Sbjct: 119 gtggtgtggatctgcaactgctccgactgcgccatgcgcgggaacgcccacttcgtcgtc 178 Query: 238 cccaaggacaagttcgcgctccaggccggcgccgccgagttcctcaccacctacaccttc 297 || ||||||| | ||| |||||||||| ||||| ||||||||||||||||||| Sbjct: 179 ccggcctccaagttcaccctcgccgccggcgccggcgagtccctcaccacctacaccttc 238 Query: 298 ggcacccacacggccaagcacaccttctgcaaggtgtgcgggatcacctcgttctacatc 357 |||||||||||||| |||||||| ||||||| ||| ||||| |||||||| ||||||| | Sbjct: 239 ggcacccacacggcgaagcacacgttctgcagggtctgcggcatcacctccttctacacc 298 Query: 358 ccgaggtccaaccccgacggcttcgccgtcaccgcggcctgcatcgaccccggcaccctg 417 ||| ||||||||||||||||| ||||||||||||| |||||| ||||||| ||||||||| Sbjct: 299 ccgcggtccaaccccgacggcgtcgccgtcaccgccgcctgcgtcgacccgggcaccctg 358 Query: 418 gcgcacgtcgagtacaggaaggcggacgggaggaactgggaggactggatcgaggggagc 477 |||||||||||||||||| | || |||||||||||||||||| | ||| || ||||| Sbjct: 359 gcgcacgtcgagtacaggcacgccgacgggaggaactgggagaagtggttctccaggagc 418 Query: 478 ggcatctccgagttctccaagccc 501 | ||||||||| |||||||||||| Sbjct: 419 gacatctccgacttctccaagccc 442
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9 Length = 22696651 Score = 381 bits (192), Expect = e-102 Identities = 336/384 (87%) Strand = Plus / Minus Query: 118 cacagcggcgggtgccactgccggcgcgtgcggtggcaggtggaggcgccggcgagcgtg 177 ||||||||||| ||||||||| |||| |||||||||| || ||||||||||||||||||| Sbjct: 13835385 cacagcggcggctgccactgcgggcgggtgcggtggcgggcggaggcgccggcgagcgtg 13835326 Query: 178 gtggcgtggatctgcaactgctccgactgctccatgcgggggaacacccatttcgtcgtg 237 |||| ||||||||||||||||||||||||| ||||||| |||||| |||| |||||||| Sbjct: 13835325 gtggtgtggatctgcaactgctccgactgcgccatgcgcgggaacgcccacttcgtcgtc 13835266 Query: 238 cccaaggacaagttcgcgctccaggccggcgccgccgagttcctcaccacctacaccttc 297 || ||||||| | ||| |||||||||| ||||| ||||||||||||||||||| Sbjct: 13835265 ccggcctccaagttcaccctcgccgccggcgccggcgagtccctcaccacctacaccttc 13835206 Query: 298 ggcacccacacggccaagcacaccttctgcaaggtgtgcgggatcacctcgttctacatc 357 |||||||||||||| |||||||| ||||||| ||| ||||| |||||||| ||||||| | Sbjct: 13835205 ggcacccacacggcgaagcacacgttctgcagggtctgcggcatcacctccttctacacc 13835146 Query: 358 ccgaggtccaaccccgacggcttcgccgtcaccgcggcctgcatcgaccccggcaccctg 417 ||| ||||||||||||||||| ||||||||||||| |||||| ||||||| ||||||||| Sbjct: 13835145 ccgcggtccaaccccgacggcgtcgccgtcaccgccgcctgcgtcgacccgggcaccctg 13835086 Query: 418 gcgcacgtcgagtacaggaaggcggacgggaggaactgggaggactggatcgaggggagc 477 |||||||||||||||||| | || |||||||||||||||||| | ||| || ||||| Sbjct: 13835085 gcgcacgtcgagtacaggcacgccgacgggaggaactgggagaagtggttctccaggagc 13835026 Query: 478 ggcatctccgagttctccaagccc 501 | ||||||||| |||||||||||| Sbjct: 13835025 gacatctccgacttctccaagccc 13835002 Score = 42.1 bits (21), Expect = 3.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 118 cacagcggcgggtgccactgc 138 ||||||||||||||||||||| Sbjct: 13836126 cacagcggcgggtgccactgc 13836106
>dbj|AP005577.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1655_B12 Length = 132736 Score = 381 bits (192), Expect = e-102 Identities = 336/384 (87%) Strand = Plus / Minus Query: 118 cacagcggcgggtgccactgccggcgcgtgcggtggcaggtggaggcgccggcgagcgtg 177 ||||||||||| ||||||||| |||| |||||||||| || ||||||||||||||||||| Sbjct: 84869 cacagcggcggctgccactgcgggcgggtgcggtggcgggcggaggcgccggcgagcgtg 84810 Query: 178 gtggcgtggatctgcaactgctccgactgctccatgcgggggaacacccatttcgtcgtg 237 |||| ||||||||||||||||||||||||| ||||||| |||||| |||| |||||||| Sbjct: 84809 gtggtgtggatctgcaactgctccgactgcgccatgcgcgggaacgcccacttcgtcgtc 84750 Query: 238 cccaaggacaagttcgcgctccaggccggcgccgccgagttcctcaccacctacaccttc 297 || ||||||| | ||| |||||||||| ||||| ||||||||||||||||||| Sbjct: 84749 ccggcctccaagttcaccctcgccgccggcgccggcgagtccctcaccacctacaccttc 84690 Query: 298 ggcacccacacggccaagcacaccttctgcaaggtgtgcgggatcacctcgttctacatc 357 |||||||||||||| |||||||| ||||||| ||| ||||| |||||||| ||||||| | Sbjct: 84689 ggcacccacacggcgaagcacacgttctgcagggtctgcggcatcacctccttctacacc 84630 Query: 358 ccgaggtccaaccccgacggcttcgccgtcaccgcggcctgcatcgaccccggcaccctg 417 ||| ||||||||||||||||| ||||||||||||| |||||| ||||||| ||||||||| Sbjct: 84629 ccgcggtccaaccccgacggcgtcgccgtcaccgccgcctgcgtcgacccgggcaccctg 84570 Query: 418 gcgcacgtcgagtacaggaaggcggacgggaggaactgggaggactggatcgaggggagc 477 |||||||||||||||||| | || |||||||||||||||||| | ||| || ||||| Sbjct: 84569 gcgcacgtcgagtacaggcacgccgacgggaggaactgggagaagtggttctccaggagc 84510 Query: 478 ggcatctccgagttctccaagccc 501 | ||||||||| |||||||||||| Sbjct: 84509 gacatctccgacttctccaagccc 84486 Score = 42.1 bits (21), Expect = 3.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 118 cacagcggcgggtgccactgc 138 ||||||||||||||||||||| Sbjct: 85610 cacagcggcgggtgccactgc 85590
>dbj|AK111009.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-174-F08, full insert sequence Length = 788 Score = 381 bits (192), Expect = e-102 Identities = 336/384 (87%) Strand = Plus / Plus Query: 118 cacagcggcgggtgccactgccggcgcgtgcggtggcaggtggaggcgccggcgagcgtg 177 ||||||||||| ||||||||| |||| |||||||||| || ||||||||||||||||||| Sbjct: 77 cacagcggcggctgccactgcgggcgggtgcggtggcgggcggaggcgccggcgagcgtg 136 Query: 178 gtggcgtggatctgcaactgctccgactgctccatgcgggggaacacccatttcgtcgtg 237 |||| ||||||||||||||||||||||||| ||||||| |||||| |||| |||||||| Sbjct: 137 gtggtgtggatctgcaactgctccgactgcgccatgcgcgggaacgcccacttcgtcgtc 196 Query: 238 cccaaggacaagttcgcgctccaggccggcgccgccgagttcctcaccacctacaccttc 297 || ||||||| | ||| |||||||||| ||||| ||||||||||||||||||| Sbjct: 197 ccggcctccaagttcaccctcgccgccggcgccggcgagtccctcaccacctacaccttc 256 Query: 298 ggcacccacacggccaagcacaccttctgcaaggtgtgcgggatcacctcgttctacatc 357 |||||||||||||| |||||||| ||||||| ||| ||||| |||||||| ||||||| | Sbjct: 257 ggcacccacacggcgaagcacacgttctgcagggtctgcggcatcacctccttctacacc 316 Query: 358 ccgaggtccaaccccgacggcttcgccgtcaccgcggcctgcatcgaccccggcaccctg 417 ||| ||||||||||||||||| ||||||||||||| |||||| ||||||| ||||||||| Sbjct: 317 ccgcggtccaaccccgacggcgtcgccgtcaccgccgcctgcgtcgacccgggcaccctg 376 Query: 418 gcgcacgtcgagtacaggaaggcggacgggaggaactgggaggactggatcgaggggagc 477 |||||||||||||||||| | || |||||||||||||||||| | ||| || ||||| Sbjct: 377 gcgcacgtcgagtacaggcacgccgacgggaggaactgggagaagtggttctccaggagc 436 Query: 478 ggcatctccgagttctccaagccc 501 | ||||||||| |||||||||||| Sbjct: 437 gacatctccgacttctccaagccc 460
>dbj|AK108004.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-135-G09, full insert sequence Length = 775 Score = 381 bits (192), Expect = e-102 Identities = 336/384 (87%) Strand = Plus / Plus Query: 118 cacagcggcgggtgccactgccggcgcgtgcggtggcaggtggaggcgccggcgagcgtg 177 ||||||||||| ||||||||| |||| |||||||||| || ||||||||||||||||||| Sbjct: 59 cacagcggcggctgccactgcgggcgggtgcggtggcgggcggaggcgccggcgagcgtg 118 Query: 178 gtggcgtggatctgcaactgctccgactgctccatgcgggggaacacccatttcgtcgtg 237 |||| ||||||||||||||||||||||||| ||||||| |||||| |||| |||||||| Sbjct: 119 gtggtgtggatctgcaactgctccgactgcgccatgcgcgggaacgcccacttcgtcgtc 178 Query: 238 cccaaggacaagttcgcgctccaggccggcgccgccgagttcctcaccacctacaccttc 297 || ||||||| | ||| |||||||||| ||||| ||||||||||||||||||| Sbjct: 179 ccggcctccaagttcaccctcgccgccggcgccggcgagtccctcaccacctacaccttc 238 Query: 298 ggcacccacacggccaagcacaccttctgcaaggtgtgcgggatcacctcgttctacatc 357 |||||||||||||| |||||||| ||||||| ||| ||||| |||||||| ||||||| | Sbjct: 239 ggcacccacacggcgaagcacacgttctgcagggtctgcggcatcacctccttctacacc 298 Query: 358 ccgaggtccaaccccgacggcttcgccgtcaccgcggcctgcatcgaccccggcaccctg 417 ||| ||||||||||||||||| ||||||||||||| |||||| ||||||| ||||||||| Sbjct: 299 ccgcggtccaaccccgacggcgtcgccgtcaccgccgcctgcgtcgacccgggcaccctg 358 Query: 418 gcgcacgtcgagtacaggaaggcggacgggaggaactgggaggactggatcgaggggagc 477 |||||||||||||||||| | || |||||||||||||||||| | ||| || ||||| Sbjct: 359 gcgcacgtcgagtacaggcacgccgacgggaggaactgggagaagtggttctccaggagc 418 Query: 478 ggcatctccgagttctccaagccc 501 | ||||||||| |||||||||||| Sbjct: 419 gacatctccgacttctccaagccc 442
>gb|BT018113.1| Zea mays clone EL01N0553G07.c mRNA sequence Length = 785 Score = 333 bits (168), Expect = 6e-88 Identities = 318/368 (86%) Strand = Plus / Plus Query: 94 atggcctcggagccggcggtcgtccacagcggcgggtgccactgccggcgcgtgcggtgg 153 |||||||| ||| ||| ||||| |||| |||||| ||||||||||||||| |||||||| Sbjct: 25 atggcctccgaggcggtcgtcgttcacaccggcggttgccactgccggcgcttgcggtgg 84 Query: 154 caggtggaggcgccggcgagcgtggtggcgtggatctgcaactgctccgactgctccatg 213 ||||| ||||| || |||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 85 caggtcgaggcccccgcgagcgtagtggcgtggatctgcaactgctccgactgttccatg 144 Query: 214 cgggggaacacccatttcgtcgtgcccaaggacaagttcgcgctccaggccggcgccgcc 273 || | ||||||||| ||| |||| ||| | ||||||| ||| ||||||||||| | | Sbjct: 145 cgcgcgaacacccacttcatcgtccccgccgccaagttcaagctgcaggccggcgctgac 204 Query: 274 gagttcctcaccacctacaccttcggcacccacacggccaagcacaccttctgcaaggtg 333 |||||| |||||||||||||||||||||| |||||||||||||||||||| |||||| Sbjct: 205 gagttcatcaccacctacaccttcggcacgcacacggccaagcacaccttttgcaagacc 264 Query: 334 tgcgggatcacctcgttctacatcccgaggtccaaccccgacggcttcgccgtcaccgcg 393 ||||| |||||||| ||||||| ||||||||||||||| |||||| | ||| |||||| | Sbjct: 265 tgcggcatcacctccttctacaccccgaggtccaacccggacggcgtggccatcaccgtg 324 Query: 394 gcctgcatcgaccccggcaccctggcgcacgtcgagtacaggaaggcggacgggaggaac 453 |||||| |||||||||| |||||| ||||||||||||| ||||| || ||||||||| Sbjct: 325 gcctgcgtcgaccccggtaccctgaagcacgtcgagtaccggaagttcgatgggaggaac 384 Query: 454 tgggagga 461 |||||||| Sbjct: 385 tgggagga 392
>gb|AY111212.1| Zea mays CL63689_1 mRNA sequence Length = 642 Score = 319 bits (161), Expect = 1e-83 Identities = 315/368 (85%) Strand = Plus / Plus Query: 94 atggcctcggagccggcggtcgtccacagcggcgggtgccactgccggcgcgtgcggtgg 153 |||||||| ||| ||| ||||| |||| |||||| ||||||||||||||| |||||||| Sbjct: 73 atggcctccgaggcggtcgtcgttcacaccggcggttgccactgccggcgcttgcggtgg 132 Query: 154 caggtggaggcgccggcgagcgtggtggcgtggatctgcaactgctccgactgctccatg 213 ||||| |||| |||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 133 caggtcgaggnnnnngcgagcgtagtggcgtggatctgcaactgctccgactgttccatg 192 Query: 214 cgggggaacacccatttcgtcgtgcccaaggacaagttcgcgctccaggccggcgccgcc 273 || | ||||||||| ||| |||| ||| | ||||||| ||| ||||||||||| | | Sbjct: 193 cgcgcgaacacccacttcatcgtccccgccgccaagttcaagctgcaggccggcgctgac 252 Query: 274 gagttcctcaccacctacaccttcggcacccacacggccaagcacaccttctgcaaggtg 333 |||||| |||||||||||||||||||||| |||||||||||||||||||| |||||| Sbjct: 253 gagttcatcaccacctacaccttcggcacgcacacggccaagcacaccttttgcaagacc 312 Query: 334 tgcgggatcacctcgttctacatcccgaggtccaaccccgacggcttcgccgtcaccgcg 393 ||||| |||||||| ||||||| ||||||||||||||| |||||| | ||| |||||| | Sbjct: 313 tgcggcatcacctccttctacaccccgaggtccaacccggacggcgtggccatcaccgtg 372 Query: 394 gcctgcatcgaccccggcaccctggcgcacgtcgagtacaggaaggcggacgggaggaac 453 |||||| |||||||||| |||||| ||||||||||||| ||||| || ||||||||| Sbjct: 373 gcctgcgtcgaccccggtaccctgaagcacgtcgagtaccggaagttcgatgggaggaac 432 Query: 454 tgggagga 461 |||||||| Sbjct: 433 tgggagga 440
>gb|AY485643.1| Hordeum vulgare subsp. vulgare BAC 615K1, complete sequence Length = 114996 Score = 165 bits (83), Expect = 3e-37 Identities = 125/139 (89%) Strand = Plus / Minus Query: 580 cgcacgtggtccttgctcactcccgtggaagccagggagcctttggttactgggtgtgcc 639 ||||||||||| || |||||||| |||||||||||||||||| ||||||||||||||| | Sbjct: 70374 cgcacgtggtcattactcactcctgtggaagccagggagcctatggttactgggtgtgtc 70315 Query: 640 cgacgagagatggtagctcagggtatcttcaaccggtttgtatggcgacatattaaaagg 699 ||| | |||||||||| |||||||||||||||||||||| |||||| |||||||| ||| Sbjct: 70314 cgatggaagatggtagcacagggtatcttcaaccggtttggatggcggcatattaatagg 70255 Query: 700 ataggtggatagtcatcta 718 ||||||| |||||||||| Sbjct: 70254 ataggtgtttagtcatcta 70236 Score = 79.8 bits (40), Expect = 2e-11 Identities = 85/100 (85%) Strand = Plus / Plus Query: 586 tggtccttgctcactcccgtggaagccagggagcctttggttactgggtgtgcccgacga 645 ||||| || |||||||| | |||| ||||||||||||||||||||||| | ||||| | Sbjct: 59207 tggtcattactcactcctgcggaaatcagggagcctttggttactgggtctacccgatgg 59266 Query: 646 gagatggtagctcagggtatcttcaaccggtttgtatggc 685 |||| |||||| | || ||||||||||||||||| ||||| Sbjct: 59267 gagacggtagcgcgggatatcttcaaccggtttggatggc 59306 Score = 63.9 bits (32), Expect = 9e-07 Identities = 44/48 (91%) Strand = Plus / Minus Query: 822 ggctgcatgcatcactcgatgcagaggccggggcgatgcctcattttc 869 ||||| ||||||||||||||||||||||| |||| ||||||| ||||| Sbjct: 70118 ggctgtatgcatcactcgatgcagaggccagggctatgcctccttttc 70071
>gb|AF414177.1|AF414177 Hordeum vulgare clone pic20G1 NBS-LRR-like protein gene, complete cds Length = 6291 Score = 153 bits (77), Expect = 1e-33 Identities = 119/133 (89%) Strand = Plus / Minus Query: 558 cttcagggctactgacttgattcgcacgtggtccttgctcactcccgtggaagccaggga 617 |||||||||||| | ||||||||||| ||||||||| |||||||| |||||| |||||| Sbjct: 5104 cttcagggctaccgccttgattcgcatgtggtccttactcactcctgtggaaatcaggga 5045 Query: 618 gcctttggttactgggtgtgcccgacgagagatggtagctcagggtatcttcaaccggtt 677 ||||||||||||||||||||||||| | |||||||||||||||| |||||||| ||| | Sbjct: 5044 gcctttggttactgggtgtgcccgatgggagatggtagctcaggctatcttcagccgata 4985 Query: 678 tgtatggcgacat 690 || |||||||||| Sbjct: 4984 tggatggcgacat 4972 Score = 75.8 bits (38), Expect = 2e-10 Identities = 53/58 (91%) Strand = Plus / Minus Query: 813 ttaataaaaggctgcatgcatcactcgatgcagaggccggggcgatgcctcattttcg 870 |||||||| || |||| |||||||||||||||||||||||||||| ||||| |||||| Sbjct: 4846 ttaataaatggttgcaggcatcactcgatgcagaggccggggcgaggcctccttttcg 4789
>gb|AF108009.1|AF108009 Hordeum vulgare HV1PST (Hv1Pst) gene, complete cds Length = 3207 Score = 145 bits (73), Expect = 3e-31 Identities = 112/125 (89%) Strand = Plus / Plus Query: 550 caggttatcttcagggctactgacttgattcgcacgtggtccttgctcactcccgtggaa 609 ||||| |||||||||||||| | |||||| |||||||||||||| |||||||| |||||| Sbjct: 267 caggtcatcttcagggctaccgccttgatccgcacgtggtccttactcactcctgtggaa 326 Query: 610 gccagggagcctttggttactgggtgtgcccgacgagagatggtagctcagggtatcttc 669 ||||||||||||||||| |||||||| |||| || ||||||||||||||| ||||||| Sbjct: 327 atcagggagcctttggttattgggtgtgtccgatgaaagatggtagctcaggttatcttc 386 Query: 670 aaccg 674 ||||| Sbjct: 387 aaccg 391 Score = 61.9 bits (31), Expect = 4e-06 Identities = 40/43 (93%) Strand = Plus / Plus Query: 828 atgcatcactcgatgcagaggccggggcgatgcctcattttcg 870 |||||||||||||||||||||||||||| | ||||| |||||| Sbjct: 561 atgcatcactcgatgcagaggccggggcaacgcctccttttcg 603
>gb|AF509748.1| Hordeum vulgare subsp. vulgare Morex barley stem rust resistance protein (Rpg1) gene, complete cds Length = 17974 Score = 121 bits (61), Expect = 5e-24 Identities = 94/105 (89%) Strand = Plus / Minus Query: 613 agggagcctttggttactgggtgtgcccgacgagagatggtagctcagggtatcttcaac 672 ||||||||| ||||||||||||||| ||| | ||||||||||| ||||||||||||||| Sbjct: 1245 agggagcctatggttactgggtgtgtccgctgggagatggtagcacagggtatcttcaac 1186 Query: 673 cggtttgtatggcgacatattaaaaggataggtggatagtcatct 717 ||||||| |||||| |||||||| |||||||||| ||||||||| Sbjct: 1185 cggtttggatggcggcatattaataggataggtgtttagtcatct 1141 Score = 54.0 bits (27), Expect = 9e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 813 ttaataaaaggctgcatgcatcactcgatgcagaggccggggcgatgcctc 863 |||||| | ||||| ||||||| |||||||||||||||||| ||| ||||| Sbjct: 1044 ttaatatatggctgtatgcatccctcgatgcagaggccgggacgaggcctc 994
>gb|AY643843.1|AY643842S2 Hordeum vulgare subsp. vulgare clones BAC 519K7 and 799C8 hardness locus region Length = 129099 Score = 95.6 bits (48), Expect = 3e-16 Identities = 81/92 (88%) Strand = Plus / Plus Query: 604 gtggaagccagggagcctttggttactgggtgtgcccgacgagagatggtagctcagggt 663 ||||| |||||||||| | ||||||||||| ||| ||| | |||||||||||||||||| Sbjct: 113160 gtggacgccagggagcttatggttactgggcgtgtccgttgggagatggtagctcagggt 113219 Query: 664 atcttcaaccggtttgtatggcgacatattaa 695 |||||||| ||||||| |||||| |||||||| Sbjct: 113220 atcttcaatcggtttggatggcgtcatattaa 113251
>gb|DQ995512.1| Hordeum vulgare clone 604d05_c-100 genomic sequence Length = 16633 Score = 83.8 bits (42), Expect = 1e-12 Identities = 105/126 (83%) Strand = Plus / Minus Query: 595 ctcactcccgtggaagccagggagcctttggttactgggtgtgcccgacgagagatggta 654 |||||||| | |||| |||| ||||||||||||||||||| | |||| | ||||||||| Sbjct: 14924 ctcactcctgcggaaaccagagagcctttggttactgggtctatccgatgggagatggta 14865 Query: 655 gctcagggtatcttcaaccggtttgtatggcgacatattaaaaggataggtggatagtca 714 || | || ||||||||||||||||| ||||||| | ||| ||||||| ||| ||| || Sbjct: 14864 gcgcgggatatcttcaaccggtttggatggcgatccagtaataggatagatggttaggca 14805 Query: 715 tctagg 720 |||||| Sbjct: 14804 tctagg 14799
>gb|AY485644.1| Triticum monococcum phosphatidylserine decarboxylase, ZCCT2, ZCCT1, and SNF2P genes, complete cds; nucellin pseudogene, complete sequence; putative transposase, phosphatidylinositol phosphatidylcholine transfer protein sec14 cytosolic-like protein, and phytochrome P450-like protein genes, complete cds; and unknown genes Length = 438828 Score = 81.8 bits (41), Expect = 4e-12 Identities = 68/77 (88%) Strand = Plus / Minus Query: 610 gccagggagcctttggttactgggtgtgcccgacgagagatggtagctcagggtatcttc 669 |||||||||| |||||||||||||| | |||| | ||||||||||||| || ||||||| Sbjct: 184464 gccagggagcatttggttactgggtctttccgatgggagatggtagctcgggatatcttc 184405 Query: 670 aaccggtttgtatggcg 686 |||||||||| |||||| Sbjct: 184404 aaccggtttggatggcg 184388
>gb|AY943294.1| Hordeum vulgare subsp. vulgare clone BAC 673I14, complete sequence Length = 108608 Score = 81.8 bits (41), Expect = 4e-12 Identities = 86/101 (85%) Strand = Plus / Minus Query: 586 tggtccttgctcactcccgtggaagccagggagcctttggttactgggtgtgcccgacga 645 ||||| || |||||||| | |||| |||||||||||||||||| ||||| | ||||| | Sbjct: 15682 tggtcattactcactcctgcggaaaccagggagcctttggttaatgggtctacccgatgg 15623 Query: 646 gagatggtagctcagggtatcttcaaccggtttgtatggcg 686 ||||||||| | | || ||||||||||||||||| |||||| Sbjct: 15622 gagatggtaacgcgggatatcttcaaccggtttggatggcg 15582
>gb|AY009938.2| Hordeum vulgare subsp. vulgare MLA1-2 (Mla1-2) gene, partial cds; and MLA1 (Mla1) gene, complete cds Length = 18958 Score = 75.8 bits (38), Expect = 2e-10 Identities = 89/106 (83%) Strand = Plus / Plus Query: 574 ttgattcgcacgtggtccttgctcactcccgtggaagccagggagcctttggttactggg 633 ||||| || |||||||| || |||||||| | |||| |||||||||||||||||||| || Sbjct: 4914 ttgatccgtacgtggtcattactcactcctgcggaaaccagggagcctttggttactagg 4973 Query: 634 tgtgcccgacgagagatggtagctcagggtatcttcaaccggtttg 679 | | ||||| | |||||||||| | | ||||||||||||||||| Sbjct: 4974 tctacccgatggaagatggtagcacgagatatcttcaaccggtttg 5019
>ref|NM_121700.3| Arabidopsis thaliana carbon-sulfur lyase (AT5G16940) mRNA, complete cds Length = 741 Score = 71.9 bits (36), Expect = 4e-09 Identities = 60/68 (88%) Strand = Plus / Plus Query: 304 cacacggccaagcacaccttctgcaaggtgtgcgggatcacctcgttctacatcccgagg 363 ||||||||||| || |||||||||||||| || |||||||| ||||| || ||||||||| Sbjct: 295 cacacggccaaacataccttctgcaaggtttgtgggatcacatcgttttatatcccgagg 354 Query: 364 tccaaccc 371 || ||||| Sbjct: 355 tctaaccc 362
>emb|AL391141.1|ATF2K13 Arabidopsis thaliana DNA chromosome 5, BAC clone F2K13 (ESSA project) Length = 98101 Score = 71.9 bits (36), Expect = 4e-09 Identities = 60/68 (88%) Strand = Plus / Minus Query: 304 cacacggccaagcacaccttctgcaaggtgtgcgggatcacctcgttctacatcccgagg 363 ||||||||||| || |||||||||||||| || |||||||| ||||| || ||||||||| Sbjct: 29091 cacacggccaaacataccttctgcaaggtttgtgggatcacatcgttttatatcccgagg 29032 Query: 364 tccaaccc 371 || ||||| Sbjct: 29031 tctaaccc 29024
>gb|BT005448.1| Arabidopsis thaliana clone U50728 unknown protein (At5g16940) mRNA, complete cds Length = 439 Score = 71.9 bits (36), Expect = 4e-09 Identities = 60/68 (88%) Strand = Plus / Plus Query: 304 cacacggccaagcacaccttctgcaaggtgtgcgggatcacctcgttctacatcccgagg 363 ||||||||||| || |||||||||||||| || |||||||| ||||| || ||||||||| Sbjct: 208 cacacggccaaacataccttctgcaaggtttgtgggatcacatcgttttatatcccgagg 267 Query: 364 tccaaccc 371 || ||||| Sbjct: 268 tctaaccc 275
>dbj|AK118106.1| Arabidopsis thaliana At5g16940 mRNA for unknown protein, complete cds, clone: RAFL19-37-D11 Length = 708 Score = 71.9 bits (36), Expect = 4e-09 Identities = 60/68 (88%) Strand = Plus / Plus Query: 304 cacacggccaagcacaccttctgcaaggtgtgcgggatcacctcgttctacatcccgagg 363 ||||||||||| || |||||||||||||| || |||||||| ||||| || ||||||||| Sbjct: 275 cacacggccaaacataccttctgcaaggtttgtgggatcacatcgttttatatcccgagg 334 Query: 364 tccaaccc 371 || ||||| Sbjct: 335 tctaaccc 342
>emb|BX841747.1|CNS09YL6 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL74ZF11 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 742 Score = 71.9 bits (36), Expect = 4e-09 Identities = 60/68 (88%) Strand = Plus / Plus Query: 304 cacacggccaagcacaccttctgcaaggtgtgcgggatcacctcgttctacatcccgagg 363 ||||||||||| || |||||||||||||| || |||||||| ||||| || ||||||||| Sbjct: 295 cacacggccaaacataccttctgcaaggtttgtgggatcacatcgttttatatcccgagg 354 Query: 364 tccaaccc 371 || ||||| Sbjct: 355 tctaaccc 362
>gb|AY146587.1| Triticum turgidum subsp. durum BAC 107G22, complete sequence Length = 142018 Score = 65.9 bits (33), Expect = 2e-07 Identities = 111/137 (81%) Strand = Plus / Plus Query: 550 caggttatcttcagggctactgacttgattcgcacgtggtccttgctcactcccgtggaa 609 |||||||||||||| ||||| | | ||| || |||||| |||| |||||||| |||| Sbjct: 88107 caggttatcttcagagctacagcttggatccgtacgtggcccttactcactcctatggac 88166 Query: 610 gccagggagcctttggttactgggtgtgcccgacgagagatggtagctcagggtatcttc 669 |||||||||||||| |||||||||| || | | |||||||| |||| || ||| ||| Sbjct: 88167 tccagggagcctttgattactgggtgcaaccaatgggagatggtggctcgggctatattc 88226 Query: 670 aaccggtttgtatggcg 686 |||||||| | |||||| Sbjct: 88227 aaccggttcggatggcg 88243
>gb|BT011931.1| Arabidopsis thaliana At5g16940 mRNA sequence Length = 405 Score = 63.9 bits (32), Expect = 9e-07 Identities = 59/68 (86%) Strand = Plus / Plus Query: 304 cacacggccaagcacaccttctgcaaggtgtgcgggatcacctcgttctacatcccgagg 363 |||||| |||| || |||||||||||||| || |||||||| ||||| || ||||||||| Sbjct: 205 cacacgaccaaacataccttctgcaaggtttgtgggatcacatcgttttatatcccgagg 264 Query: 364 tccaaccc 371 || ||||| Sbjct: 265 tctaaccc 272
>dbj|AB058924.1| Hordeum vulgare gene for protein kinase HvPKABA1, complete cds, cultivar:Igri Length = 11684 Score = 63.9 bits (32), Expect = 9e-07 Identities = 56/64 (87%) Strand = Plus / Minus Query: 595 ctcactcccgtggaagccagggagcctttggttactgggtgtgcccgacgagagatggta 654 |||||||||| || | ||||||||| ||||||||||| ||||| ||| ||||||||||| Sbjct: 4673 ctcactcccgcggcaaccagggagcttttggttactgagtgtgtccggtgagagatggta 4614 Query: 655 gctc 658 |||| Sbjct: 4613 gctc 4610
>gb|AF474373.1| Hordeum vulgare subsp. vulgare BAC 259I16, complete sequence Length = 124050 Score = 56.0 bits (28), Expect = 2e-04 Identities = 31/32 (96%) Strand = Plus / Minus Query: 824 ctgcatgcatcactcgatgcagaggccggggc 855 |||||||||||||| ||||||||||||||||| Sbjct: 90888 ctgcatgcatcacttgatgcagaggccggggc 90857
>gb|AY613782.1| Aegilops tauschii isolate TA2468 clone 2 HCBT-like putative PR gene, partial cds Length = 6062 Score = 52.0 bits (26), Expect = 0.003 Identities = 71/86 (82%) Strand = Plus / Minus Query: 550 caggttatcttcagggctactgacttgattcgcacgtggtccttgctcactcccgtggaa 609 ||||| |||||||| ||||| | | ||| || ||||||||||| |||||||| | || Sbjct: 145 caggtcatcttcagagctaccgcatggatccgtacgtggtccttactcactcctatagac 86 Query: 610 gccagggagcctttggttactgggtg 635 | ||||||||||||||||||||||| Sbjct: 85 tctagggagcctttggttactgggtg 60
>gb|AF509767.1| Hordeum vulgare subsp. vulgare isolate NRG021 Rpg1 region, genomic sequence Length = 2112 Score = 52.0 bits (26), Expect = 0.003 Identities = 41/46 (89%) Strand = Plus / Minus Query: 613 agggagcctttggttactgggtgtgcccgacgagagatggtagctc 658 ||||||||||||||||||||||||| || |||| |||||||||| Sbjct: 1319 agggagcctttggttactgggtgtgtccagtgagatatggtagctc 1274
>gb|AF446141.1| Aegilops tauschii LZ-NBS-LRR class RGA, NBS-LRR class RGA, HCBT-like putative defense response protein, and putative alliin lyase genes, complete cds; and unknown genes Length = 106618 Score = 52.0 bits (26), Expect = 0.003 Identities = 71/86 (82%) Strand = Plus / Minus Query: 550 caggttatcttcagggctactgacttgattcgcacgtggtccttgctcactcccgtggaa 609 ||||| |||||||| ||||| | | ||| || ||||||||||| |||||||| | || Sbjct: 38512 caggtcatcttcagagctaccgcatggatccgtacgtggtccttactcactcctatagac 38453 Query: 610 gccagggagcctttggttactgggtg 635 | ||||||||||||||||||||||| Sbjct: 38452 tctagggagcctttggttactgggtg 38427
>gb|AY146588.1| Triticum monococcum BAC clone 453N11, complete sequence Length = 285444 Score = 50.1 bits (25), Expect = 0.014 Identities = 43/49 (87%) Strand = Plus / Plus Query: 584 cgtggtccttgctcactcccgtggaagccagggagcctttggttactgg 632 |||||||| | ||||||||| |||||||||| ||| |||||||||||| Sbjct: 241083 cgtggtccctactcactcccatggaagccagaaagcatttggttactgg 241131
>gb|DQ854804.1| Hordeum vulgare subsp. vulgare RPG1 (Rpg1) gene, Rpg1-Swiss Hv 645 allele, complete cds Length = 5062 Score = 46.1 bits (23), Expect = 0.21 Identities = 29/31 (93%) Strand = Plus / Plus Query: 839 gatgcagaggccggggcgatgcctcattttc 869 ||||||||||||||||||| ||||| ||||| Sbjct: 4823 gatgcagaggccggggcgaggcctccttttc 4853
>gb|DQ854803.1| Hordeum vulgare subsp. vulgare RPG1 (Rpg1) gene, Rpg1-Swiss Hv 489 allele, complete cds Length = 5062 Score = 46.1 bits (23), Expect = 0.21 Identities = 29/31 (93%) Strand = Plus / Plus Query: 839 gatgcagaggccggggcgatgcctcattttc 869 ||||||||||||||||||| ||||| ||||| Sbjct: 4823 gatgcagaggccggggcgaggcctccttttc 4853
>gb|DQ854802.1| Hordeum vulgare subsp. vulgare RPG1 (RPG1) gene, RPG1-Swiss Hv 619 allele, complete cds Length = 5062 Score = 46.1 bits (23), Expect = 0.21 Identities = 29/31 (93%) Strand = Plus / Plus Query: 839 gatgcagaggccggggcgatgcctcattttc 869 ||||||||||||||||||| ||||| ||||| Sbjct: 4823 gatgcagaggccggggcgaggcctccttttc 4853
>gb|AF509764.1| Hordeum vulgare subsp. vulgare Gobernadora Rpg1 pseudogene, complete sequence Length = 4833 Score = 46.1 bits (23), Expect = 0.21 Identities = 29/31 (93%) Strand = Plus / Plus Query: 839 gatgcagaggccggggcgatgcctcattttc 869 ||||||||||||||||||| ||||| ||||| Sbjct: 4576 gatgcagaggccggggcgaggcctccttttc 4606
>gb|AF509763.1| Hordeum vulgare subsp. vulgare Dictoo Rpg1 pseudogene, complete sequence Length = 4837 Score = 46.1 bits (23), Expect = 0.21 Identities = 29/31 (93%) Strand = Plus / Minus Query: 839 gatgcagaggccggggcgatgcctcattttc 869 ||||||||||||||||||| ||||| ||||| Sbjct: 258 gatgcagaggccggggcgaggcctccttttc 228
>gb|AF509762.1| Hordeum vulgare subsp. vulgare Sm89010 Rpg1 pseudogene, complete sequence Length = 4836 Score = 46.1 bits (23), Expect = 0.21 Identities = 29/31 (93%) Strand = Plus / Plus Query: 839 gatgcagaggccggggcgatgcctcattttc 869 ||||||||||||||||||| ||||| ||||| Sbjct: 4587 gatgcagaggccggggcgaggcctccttttc 4617
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6 Length = 30731886 Score = 46.1 bits (23), Expect = 0.21 Identities = 29/31 (93%) Strand = Plus / Plus Query: 143 gcgtgcggtggcaggtggaggcgccggcgag 173 |||||| || ||||||||||||||||||||| Sbjct: 5802357 gcgtgctgtcgcaggtggaggcgccggcgag 5802387 Score = 46.1 bits (23), Expect = 0.21 Identities = 29/31 (93%) Strand = Plus / Minus Query: 143 gcgtgcggtggcaggtggaggcgccggcgag 173 |||||| || ||||||||||||||||||||| Sbjct: 5803420 gcgtgctgtcgcaggtggaggcgccggcgag 5803390 Score = 42.1 bits (21), Expect = 3.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 160 gaggcgccggcgagcgtggtggcgt 184 ||||||||||||||| ||||||||| Sbjct: 5671874 gaggcgccggcgagcctggtggcgt 5671850 Score = 42.1 bits (21), Expect = 3.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 153 gcaggtggaggcgccggcgag 173 ||||||||||||||||||||| Sbjct: 9265357 gcaggtggaggcgccggcgag 9265377
>dbj|AP003458.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0701E03 Length = 183245 Score = 46.1 bits (23), Expect = 0.21 Identities = 29/31 (93%) Strand = Plus / Plus Query: 143 gcgtgcggtggcaggtggaggcgccggcgag 173 |||||| || ||||||||||||||||||||| Sbjct: 117886 gcgtgctgtcgcaggtggaggcgccggcgag 117916 Score = 46.1 bits (23), Expect = 0.21 Identities = 29/31 (93%) Strand = Plus / Minus Query: 143 gcgtgcggtggcaggtggaggcgccggcgag 173 |||||| || ||||||||||||||||||||| Sbjct: 118949 gcgtgctgtcgcaggtggaggcgccggcgag 118919
>dbj|AP003525.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0537F07 Length = 147724 Score = 46.1 bits (23), Expect = 0.21 Identities = 29/31 (93%) Strand = Plus / Plus Query: 143 gcgtgcggtggcaggtggaggcgccggcgag 173 |||||| || ||||||||||||||||||||| Sbjct: 3132 gcgtgctgtcgcaggtggaggcgccggcgag 3162 Score = 46.1 bits (23), Expect = 0.21 Identities = 29/31 (93%) Strand = Plus / Minus Query: 143 gcgtgcggtggcaggtggaggcgccggcgag 173 |||||| || ||||||||||||||||||||| Sbjct: 4195 gcgtgctgtcgcaggtggaggcgccggcgag 4165
>gb|CP000158.1| Hyphomonas neptunium ATCC 15444, complete genome Length = 3705021 Score = 44.1 bits (22), Expect = 0.84 Identities = 37/42 (88%) Strand = Plus / Minus Query: 349 ttctacatcccgaggtccaaccccgacggcttcgccgtcacc 390 |||||||||||| | || |||||||||||| | ||||||||| Sbjct: 1354046 ttctacatcccgcgctcaaaccccgacggcgttgccgtcacc 1354005
>gb|DQ537335.1| Triticum aestivum clones BAC 1031P08; BAC 754K10; BAC 1344C16, complete sequence Length = 292102 Score = 44.1 bits (22), Expect = 0.84 Identities = 32/34 (94%), Gaps = 1/34 (2%) Strand = Plus / Minus Query: 822 ggctgcatgcatcactc-gatgcagaggccgggg 854 |||||||||||||| || |||||||||||||||| Sbjct: 76186 ggctgcatgcatcattctgatgcagaggccgggg 76153
>gb|AE004091.2| Pseudomonas aeruginosa PAO1, complete genome Length = 6264404 Score = 44.1 bits (22), Expect = 0.84 Identities = 22/22 (100%) Strand = Plus / Minus Query: 253 gcgctccaggccggcgccgccg 274 |||||||||||||||||||||| Sbjct: 2305132 gcgctccaggccggcgccgccg 2305111
>gb|DQ176871.1| Streptomyces aureofaciens strain Tu117 lipomycin biosynthesis gene cluster, complete sequence Length = 66871 Score = 44.1 bits (22), Expect = 0.84 Identities = 22/22 (100%) Strand = Plus / Minus Query: 258 ccaggccggcgccgccgagttc 279 |||||||||||||||||||||| Sbjct: 29160 ccaggccggcgccgccgagttc 29139
>gb|AY494981.1| Triticum turgidum A genome HMW glutenin A gene locus, sequence Length = 307015 Score = 44.1 bits (22), Expect = 0.84 Identities = 32/34 (94%), Gaps = 1/34 (2%) Strand = Plus / Minus Query: 822 ggctgcatgcatcactc-gatgcagaggccgggg 854 |||||||||||||| || |||||||||||||||| Sbjct: 46948 ggctgcatgcatcattctgatgcagaggccgggg 46915
>emb|BX649452.4| Zebrafish DNA sequence from clone DKEY-226L10 in linkage group 24, complete sequence Length = 192113 Score = 44.1 bits (22), Expect = 0.84 Identities = 25/26 (96%) Strand = Plus / Plus Query: 809 gtgtttaataaaaggctgcatgcatc 834 ||||| |||||||||||||||||||| Sbjct: 131113 gtgttaaataaaaggctgcatgcatc 131138
>gb|AF325197.1|AF325197 Triticum aestivum LRK33 (Lrk33) and TAK33 (Tak33) genes, complete cds Length = 20754 Score = 44.1 bits (22), Expect = 0.84 Identities = 34/38 (89%) Strand = Plus / Plus Query: 595 ctcactcccgtggaagccagggagcctttggttactgg 632 |||||||| |||| |||||||||| |||||||||||| Sbjct: 2786 ctcactccgatggaggccagggagcgtttggttactgg 2823
>emb|BX248581.17| Zebrafish DNA sequence from clone CH211-208O6 in linkage group 24, complete sequence Length = 202872 Score = 44.1 bits (22), Expect = 0.84 Identities = 25/26 (96%) Strand = Plus / Plus Query: 809 gtgtttaataaaaggctgcatgcatc 834 ||||| |||||||||||||||||||| Sbjct: 86527 gtgttaaataaaaggctgcatgcatc 86552
>gb|AF061204.1|AF061204 Hordeum vulgare subsp. spontaneum NPGS PI296897 beta-amylase (beta-amy1) gene, complete cds Length = 4976 Score = 44.1 bits (22), Expect = 0.84 Identities = 37/42 (88%) Strand = Plus / Minus Query: 828 atgcatcactcgatgcagaggccggggcgatgcctcattttc 869 ||||||| ||||||||||||||||||| | ||||| ||||| Sbjct: 4283 atgcatctttcgatgcagaggccggggctaagcctccttttc 4242
>gb|AF061203.1|AF061203 Hordeum vulgare cultivar Adorra beta-amylase (beta-amy1) gene, complete cds Length = 5126 Score = 44.1 bits (22), Expect = 0.84 Identities = 37/42 (88%) Strand = Plus / Minus Query: 828 atgcatcactcgatgcagaggccggggcgatgcctcattttc 869 ||||||| ||||||||||||||||||| | ||||| ||||| Sbjct: 4433 atgcatctttcgatgcagaggccggggctaagcctccttttc 4392
>dbj|D49999.1|BLYAMYB Hordeum vulgare subsp. vulgare AMYB gene for beta-amylase, complete cds Length = 3825 Score = 44.1 bits (22), Expect = 0.84 Identities = 37/42 (88%) Strand = Plus / Minus Query: 828 atgcatcactcgatgcagaggccggggcgatgcctcattttc 869 ||||||| ||||||||||||||||||| | ||||| ||||| Sbjct: 3027 atgcatctttcgatgcagaggccggggctaagcctccttttc 2986
>ref|NM_001063905.1| Oryza sativa (japonica cultivar-group) Os06g0273700 (Os06g0273700) mRNA, partial cds Length = 1562 Score = 42.1 bits (21), Expect = 3.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 153 gcaggtggaggcgccggcgag 173 ||||||||||||||||||||| Sbjct: 581 gcaggtggaggcgccggcgag 601
>ref|NM_001063651.1| Oryza sativa (japonica cultivar-group) Os06g0210900 (Os06g0210900) mRNA, complete cds Length = 1737 Score = 42.1 bits (21), Expect = 3.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 160 gaggcgccggcgagcgtggtggcgt 184 ||||||||||||||| ||||||||| Sbjct: 1531 gaggcgccggcgagcctggtggcgt 1507
>emb|AM260479.1| Ralstonia eutropha H16 chromosome 1 Length = 4052032 Score = 42.1 bits (21), Expect = 3.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 262 gccggcgccgccgagttcctc 282 ||||||||||||||||||||| Sbjct: 2070402 gccggcgccgccgagttcctc 2070382
>emb|AM270418.1| Uncultured organism cosmid clone 10D02 Length = 40821 Score = 42.1 bits (21), Expect = 3.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 262 gccggcgccgccgagttcctc 282 ||||||||||||||||||||| Sbjct: 17708 gccggcgccgccgagttcctc 17728
>gb|AF357202.1| Streptomyces nodosus amphotericin biosynthetic gene cluster, complete sequence Length = 113193 Score = 42.1 bits (21), Expect = 3.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 393 ggcctgcatcgaccccggcaccctg 417 |||| |||||||||||||||||||| Sbjct: 29152 ggccggcatcgaccccggcaccctg 29176
>gb|AE014850.1| Plasmodium falciparum 3D7 chromosome 12, section 7 of 9 of the complete sequence Length = 250713 Score = 42.1 bits (21), Expect = 3.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 761 atctttttctttttcaagacc 781 ||||||||||||||||||||| Sbjct: 5722 atctttttctttttcaagacc 5742
>gb|AC126458.3| Mus musculus BAC clone RP23-154H24 from chromosome 2, complete sequence Length = 203687 Score = 42.1 bits (21), Expect = 3.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 50 atccatatcccccatttcccc 70 ||||||||||||||||||||| Sbjct: 184522 atccatatcccccatttcccc 184502
>ref|XM_751068.1| Ustilago maydis 521 hypothetical protein (UM00014.1) partial mRNA Length = 1074 Score = 42.1 bits (21), Expect = 3.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 230 tcgtcgtgcccaaggacaagt 250 ||||||||||||||||||||| Sbjct: 818 tcgtcgtgcccaaggacaagt 838
>emb|CR703960.2|CNS0G64K Tetraodon nigroviridis full-length cDNA Length = 995 Score = 42.1 bits (21), Expect = 3.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 297 cggcacccacacggccaagca 317 ||||||||||||||||||||| Sbjct: 568 cggcacccacacggccaagca 588
>emb|CR669807.2|CNS0FFSL Tetraodon nigroviridis full-length cDNA Length = 519 Score = 42.1 bits (21), Expect = 3.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 297 cggcacccacacggccaagca 317 ||||||||||||||||||||| Sbjct: 92 cggcacccacacggccaagca 112
>emb|CR665438.2|CNS0FCF8 Tetraodon nigroviridis full-length cDNA Length = 1008 Score = 42.1 bits (21), Expect = 3.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 297 cggcacccacacggccaagca 317 ||||||||||||||||||||| Sbjct: 581 cggcacccacacggccaagca 601
>emb|CR658031.1|CNS0F6PH Tetraodon nigroviridis full-length cDNA Length = 1006 Score = 42.1 bits (21), Expect = 3.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 297 cggcacccacacggccaagca 317 ||||||||||||||||||||| Sbjct: 579 cggcacccacacggccaagca 599
>emb|AL358975.8| Human DNA sequence from clone RP11-375O18 on chromosome 9 Contains a novel gene, the 5' end of the TLE4 gene for transducin-like enhancer of split 4 (E(sp1) homolog, Drosophila) (ESG4) and a CpG island, complete sequence Length = 196337 Score = 42.1 bits (21), Expect = 3.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 2 aaaacaaaccactgaacccga 22 ||||||||||||||||||||| Sbjct: 148263 aaaacaaaccactgaacccga 148283
>emb|X65606.1|HVBKIN12G H.vulgare BKIN12 gene for protein kinase Length = 5574 Score = 42.1 bits (21), Expect = 3.3 Identities = 30/33 (90%) Strand = Plus / Minus Query: 823 gctgcatgcatcactcgatgcagaggccggggc 855 |||||||||||| | ||||||||||||||||| Sbjct: 1608 gctgcatgcatcgattgatgcagaggccggggc 1576
>emb|AL939108.1|SCO939108 Streptomyces coelicolor A3(2) complete genome; segment 5/29 Length = 339650 Score = 42.1 bits (21), Expect = 3.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 265 ggcgccgccgagttcctcacc 285 ||||||||||||||||||||| Sbjct: 219245 ggcgccgccgagttcctcacc 219225
>gb|AC018665.9| Homo sapiens chromosome 17, clone RP11-449J21, complete sequence Length = 184393 Score = 42.1 bits (21), Expect = 3.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 446 ggaggaactgggaggactgga 466 ||||||||||||||||||||| Sbjct: 141225 ggaggaactgggaggactgga 141205
>gb|AY899214.1| Streptomyces aizunensis strain NRRL B-11277 glycosyltransferase, polyketide synthase type Is, acyl transferase, membrane protein, ABC transporter, sugar dehydratase/epimerase, sugar epimerase, sugar nucleotidyltransferase, sugar dehydratase/epimerase, thioesterase, acyl CoA ligase, amine oxidase, phosphopantetheinyl transferase, transcriptional regulator, carboxylase/carboxyltransferase, amidinohydrolase, amide synthetase, 5-aminolevulinate synthase, and acyl CoA ligase genes, complete cds; and unknown gene Length = 161719 Score = 42.1 bits (21), Expect = 3.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 264 cggcgccgccgagttcctcaccacc 288 |||||||||||||||| |||||||| Sbjct: 34548 cggcgccgccgagttcgtcaccacc 34524
>gb|AC040980.14| Homo sapiens chromosome 17, clone RP11-685I11, complete sequence Length = 139484 Score = 42.1 bits (21), Expect = 3.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 446 ggaggaactgggaggactgga 466 ||||||||||||||||||||| Sbjct: 27278 ggaggaactgggaggactgga 27258
>gb|AC092601.3| Homo sapiens BAC clone RP11-125M15 from 2, complete sequence Length = 198364 Score = 42.1 bits (21), Expect = 3.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 760 tatctttttctttttcaagac 780 ||||||||||||||||||||| Sbjct: 125357 tatctttttctttttcaagac 125377
>dbj|AP005813.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0676F10 Length = 142510 Score = 42.1 bits (21), Expect = 3.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 153 gcaggtggaggcgccggcgag 173 ||||||||||||||||||||| Sbjct: 32698 gcaggtggaggcgccggcgag 32718
>dbj|AP004687.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0021C04 Length = 162115 Score = 42.1 bits (21), Expect = 3.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 160 gaggcgccggcgagcgtggtggcgt 184 ||||||||||||||| ||||||||| Sbjct: 64021 gaggcgccggcgagcctggtggcgt 63997
>ref|XM_953052.1| Neurospora crassa OR74A hypothetical protein (NCU09293.1) partial mRNA Length = 306 Score = 42.1 bits (21), Expect = 3.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 490 ttctccaagcccgcggcagcc 510 ||||||||||||||||||||| Sbjct: 53 ttctccaagcccgcggcagcc 73
>dbj|AK110332.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-164-E01, full insert sequence Length = 1737 Score = 42.1 bits (21), Expect = 3.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 160 gaggcgccggcgagcgtggtggcgt 184 ||||||||||||||| ||||||||| Sbjct: 1531 gaggcgccggcgagcctggtggcgt 1507
>dbj|AK106489.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-105-A03, full insert sequence Length = 1562 Score = 42.1 bits (21), Expect = 3.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 153 gcaggtggaggcgccggcgag 173 ||||||||||||||||||||| Sbjct: 581 gcaggtggaggcgccggcgag 601
>gb|AE015450.1| Mycoplasma gallisepticum strain R complete genome Length = 996422 Score = 42.1 bits (21), Expect = 3.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 662 gtatcttcaaccggtttgtat 682 ||||||||||||||||||||| Sbjct: 341429 gtatcttcaaccggtttgtat 341449
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 42.1 bits (21), Expect = 3.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 233 tcgtgcccaaggacaagttcg 253 ||||||||||||||||||||| Sbjct: 2205270 tcgtgcccaaggacaagttcg 2205290
>emb|AL136001.6|CNS01DVR Human chromosome 14 DNA sequence BAC R-865F7 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 185967 Score = 42.1 bits (21), Expect = 3.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 760 tatctttttctttttcaagac 780 ||||||||||||||||||||| Sbjct: 74931 tatctttttctttttcaagac 74911
>gb|AE009442.1| Xylella fastidiosa Temecula1, complete genome Length = 2519802 Score = 42.1 bits (21), Expect = 3.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 382 gccgtcaccgcggcctgcatc 402 ||||||||||||||||||||| Sbjct: 1571665 gccgtcaccgcggcctgcatc 1571645
>gb|AF047717.1|AF047717 Streptomyces chrysomallus actinomycin synthetase II (acmB) gene, complete cds Length = 7836 Score = 42.1 bits (21), Expect = 3.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 252 cgcgctccaggccggcgccgccgag 276 ||||| ||||||||||||||||||| Sbjct: 5629 cgcgcgccaggccggcgccgccgag 5605
>emb|AL844168.5| Mouse DNA sequence from clone RP23-413G9 on chromosome 4, complete sequence Length = 143572 Score = 42.1 bits (21), Expect = 3.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 446 ggaggaactgggaggactgga 466 ||||||||||||||||||||| Sbjct: 140844 ggaggaactgggaggactgga 140824
>emb|AL845515.5| Mouse DNA sequence from clone RP23-256D19 on chromosome 2, complete sequence Length = 137431 Score = 42.1 bits (21), Expect = 3.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 50 atccatatcccccatttcccc 70 ||||||||||||||||||||| Sbjct: 68169 atccatatcccccatttcccc 68149
>dbj|AP001381.5| Homo sapiens genomic DNA, chromosome 18 clone:RP11-881L2, complete sequence Length = 65000 Score = 42.1 bits (21), Expect = 3.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 757 ttgtatctttttctttttcaa 777 ||||||||||||||||||||| Sbjct: 17463 ttgtatctttttctttttcaa 17443 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 130,801,931 Number of extensions: 7673479 Number of successful extensions: 192451 Number of sequences better than 10.0: 81 Number of HSP's gapped: 192441 Number of HSP's successfully gapped: 98 Length of query: 885 Length of database: 18,610,659,111 Length adjustment: 22 Effective length of query: 863 Effective length of database: 18,508,616,841 Effective search space: 15972936333783 Effective search space used: 15972936333783 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)