ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf131e11 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK120814:Os05g0138000 | 84 | 9e-17 | 2 | AK063135:Os01g0288200 | 60 | 2e-09 | 3 | AK067317:Os07g0572400 | 32 | 0.73 | 4 | AK107553:Os05g0313700 | 32 | 0.73 | 5 | AK108206:Os07g0115500 | 31 | 1.2 | 6 | Os07g0204400:Os07g0204400 | 30 | 2.1 | 7 | AK107011:Os03g0206400 | 30 | 2.1 | 8 | AK066494:Os03g0206400 | 30 | 2.1 | 9 | AK069664:Os04g0561500 | 30 | 2.1 | 10 | AK065953:Os04g0561500 | 30 | 2.1 | 11 | AK120337:Os03g0806800 | 30 | 2.8 | 12 | AK108203:Os08g0241300 | 30 | 2.8 | 13 | AK061623:Os03g0806800 | 30 | 2.8 | 14 | AK107076:Os04g0603400 | 29 | 3.6 | 15 | AK103002:Os03g0762500 | 29 | 4.7 |
|---|
>AK120814:Os05g0138000 | Length = 119 Score = 84.3 bits (207), Expect = 9e-17 Identities = 54/118 (45%), Positives = 64/118 (54%), Gaps = 12/118 (10%) Frame = +2 Query: 128 MGSWKRTITSPFRKACTILSPQ--NGGSRSDDQHG----------GSVNDGKKTPRTRHH 271 MGSW RTITSPFRKA TIL+ Q N D+ H S + TP + Sbjct: 1 MGSWVRTITSPFRKARTILNQQATNTSGSIDEHHHRHRAKKPRRHSSSSSAAGTPSSSSS 60 Query: 272 LKRSXXXXXXXXXXXEVVESPSTTAQLYGDVMACAYEDVQVMWSMLDNKAKVVDTAAS 445 + EVV S+ QLYGDVMACAYEDVQVMWSMLDNK+++ AA+ Sbjct: 61 SSTTTATRTGGDVEEEVVMRRSS--QLYGDVMACAYEDVQVMWSMLDNKSRLCAAAAA 116
>AK063135:Os01g0288200 | Length = 80 Score = 60.1 bits (144), Expect = 2e-09 Identities = 37/99 (37%), Positives = 49/99 (49%) Frame = +2 Query: 131 GSWKRTITSPFRKACTILSPQNGGSRSDDQHGGSVNDGKKTPRTRHHLKRSXXXXXXXXX 310 GSW RTITSPFRK ++GG R + G + Sbjct: 3 GSWVRTITSPFRKVFGAQPHKDGGKRPQQPNSGMM------------------------- 37 Query: 311 XXEVVESPSTTAQLYGDVMACAYEDVQVMWSMLDNKAKV 427 + V + ++L+G+VMACAYEDVQVMW MLD KA++ Sbjct: 38 -VQHVVVDAERSKLHGEVMACAYEDVQVMWDMLD-KARI 74
>AK067317:Os07g0572400 | Length = 90 Score = 31.6 bits (70), Expect = 0.73 Identities = 12/20 (60%), Positives = 16/20 (80%) Frame = +2 Query: 350 LYGDVMACAYEDVQVMWSML 409 LY DV +C EDVQ++WS+L Sbjct: 50 LYEDVKSCPCEDVQILWSIL 69
>AK107553:Os05g0313700 | Length = 607 Score = 31.6 bits (70), Expect = 0.73 Identities = 24/69 (34%), Positives = 30/69 (43%) Frame = -1 Query: 651 RYHASAGDSFRAQQKQNGEESQDSSSTVFRLSTGDSECSGCSSSMYWIDDGTPRPIDRSS 472 R +S DS + NG S SSS+ S+G S C+G SSS D T D +S Sbjct: 267 RSSSSRSDSSSSSSSSNGSGSSSSSSS--GASSGSSSCAGSSSSSSGSD--TDADADSAS 322 Query: 471 VMVDAARGH 445 D H Sbjct: 323 NRPDTTTDH 331
>AK108206:Os07g0115500 | Length = 94 Score = 30.8 bits (68), Expect = 1.2 Identities = 18/49 (36%), Positives = 23/49 (46%) Frame = +2 Query: 347 QLYGDVMACAYEDVQVMWSMLDNKAKVVDTAAS*PRAASTITDDRSMGR 493 +L +V C Y DV VMW ML + AA+ PR A+ R R Sbjct: 33 KLRNEVRTCEYSDVHVMWEMLSSM-----DAAAPPRHAAAAAAGRKRRR 76
>Os07g0204400:Os07g0204400 | Length = 64 Score = 30.0 bits (66), Expect = 2.1 Identities = 12/20 (60%), Positives = 15/20 (75%) Frame = +2 Query: 350 LYGDVMACAYEDVQVMWSML 409 LY DV +C EDV V+WS+L Sbjct: 31 LYKDVQSCQDEDVHVLWSIL 50
>AK107011:Os03g0206400 | Length = 96 Score = 30.0 bits (66), Expect = 2.1 Identities = 12/21 (57%), Positives = 15/21 (71%) Frame = +2 Query: 347 QLYGDVMACAYEDVQVMWSML 409 +L +V C YEDV+VMW ML Sbjct: 37 RLRQEVSTCEYEDVRVMWEML 57
>AK066494:Os03g0206400 | Length = 91 Score = 30.0 bits (66), Expect = 2.1 Identities = 12/21 (57%), Positives = 15/21 (71%) Frame = +2 Query: 347 QLYGDVMACAYEDVQVMWSML 409 +L +V C YEDV+VMW ML Sbjct: 32 RLRQEVSTCEYEDVRVMWEML 52
>AK069664:Os04g0561500 | Length = 739 Score = 30.0 bits (66), Expect = 2.1 Identities = 23/86 (26%), Positives = 37/86 (43%), Gaps = 13/86 (15%) Frame = -1 Query: 573 TVFRLSTGDSECSGCSSSMYWIDDGTP-----RPIDR--------SSVMVDAARGHEAAV 433 T+ R T D CS +W+ +P RP ++ S++++ A Sbjct: 613 TIGRAWTCDFGCSEKEEEFHWLIKYSPLHNVRRPWEKGHRRQQYPSTMLLTADHDDRVVP 672 Query: 432 STTLALLSSMDHMTCTSS*AHAITSP 355 S TL L++M H+ CTS T+P Sbjct: 673 SHTLKFLATMQHVLCTSVKESPQTNP 698
>AK065953:Os04g0561500 | Length = 739 Score = 30.0 bits (66), Expect = 2.1 Identities = 23/86 (26%), Positives = 37/86 (43%), Gaps = 13/86 (15%) Frame = -1 Query: 573 TVFRLSTGDSECSGCSSSMYWIDDGTP-----RPIDR--------SSVMVDAARGHEAAV 433 T+ R T D CS +W+ +P RP ++ S++++ A Sbjct: 613 TIGRAWTCDFGCSEKEEEFHWLIKYSPLHNVRRPWEKGHRRQQYPSTMLLTADHDDRVVP 672 Query: 432 STTLALLSSMDHMTCTSS*AHAITSP 355 S TL L++M H+ CTS T+P Sbjct: 673 SHTLKFLATMQHVLCTSVKESPQTNP 698
>AK120337:Os03g0806800 | Length = 64 Score = 29.6 bits (65), Expect = 2.8 Identities = 12/20 (60%), Positives = 15/20 (75%) Frame = +2 Query: 350 LYGDVMACAYEDVQVMWSML 409 LY DV +C EDV V+WS+L Sbjct: 31 LYKDVKSCQDEDVHVLWSIL 50
>AK108203:Os08g0241300 | Length = 91 Score = 29.6 bits (65), Expect = 2.8 Identities = 12/24 (50%), Positives = 18/24 (75%) Frame = +2 Query: 347 QLYGDVMACAYEDVQVMWSMLDNK 418 +L+ DV C Y+DVQVM+ ML ++ Sbjct: 36 KLHEDVQTCDYKDVQVMFEMLTSE 59
>AK061623:Os03g0806800 | Length = 64 Score = 29.6 bits (65), Expect = 2.8 Identities = 12/20 (60%), Positives = 15/20 (75%) Frame = +2 Query: 350 LYGDVMACAYEDVQVMWSML 409 LY DV +C EDV V+WS+L Sbjct: 31 LYKDVKSCQDEDVHVLWSIL 50
>AK107076:Os04g0603400 | Length = 92 Score = 29.3 bits (64), Expect = 3.6 Identities = 12/30 (40%), Positives = 20/30 (66%) Frame = +2 Query: 329 SPSTTAQLYGDVMACAYEDVQVMWSMLDNK 418 S + +L+ DV C Y+DVQVM+ +L ++ Sbjct: 30 SGGSILKLHEDVQTCGYKDVQVMFEILKSE 59
>AK103002:Os03g0762500 | Length = 94 Score = 28.9 bits (63), Expect = 4.7 Identities = 15/45 (33%), Positives = 20/45 (44%) Frame = +2 Query: 335 STTAQLYGDVMACAYEDVQVMWSMLDNKAKVVDTAAS*PRAASTI 469 S +L +V C Y DV +MW ML V A AA+ + Sbjct: 27 SGLGKLKKEVRTCEYHDVHIMWEMLRKTDAPVPMAEKEAAAAAAV 71 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 20,715,740 Number of extensions: 440932 Number of successful extensions: 1009 Number of sequences better than 10.0: 15 Number of HSP's gapped: 1007 Number of HSP's successfully gapped: 16 Length of query: 283 Length of database: 15,399,855 Length adjustment: 99 Effective length of query: 184 Effective length of database: 11,435,796 Effective search space: 2104186464 Effective search space used: 2104186464 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
