ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf131e11
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1LOC_Os05g04680:12005.t00362:unspliced-genomic expressed protein 68 2e-17
2LOC_Os01g18450:12001.t01638:unspliced-genomic expressed protein 51 1e-11
3LOC_Os06g44870:12006.t04174:unspliced-genomic expressed protein 41 0.009
4LOC_Os04g56309:12004.t05102:unspliced-genomic hypothetical p... 40 0.030
5LOC_Os07g38470:12007.t03512:unspliced-genomic expressed protein 35 0.73
6LOC_Os09g31120:12009.t02755:unspliced-genomic pirin-like pro... 35 1.0
7LOC_Os02g10970:12002.t00945:unspliced-genomic peptidyl-proly... 35 1.0
8LOC_Os01g57050:12001.t05114:unspliced-genomic expressed protein 34 1.9
9LOC_Os03g51870:12003.t04515:unspliced-genomic kinetoplast-as... 31 2.2
10LOC_Os07g10440:12007.t00918:unspliced-genomic expressed protein 33 2.6
11LOC_Os03g10860:12003.t00887:unspliced-genomic expressed protein 33 2.6
12LOC_Os02g12690:12002.t01066:unspliced-genomic cytochrome P45... 33 2.6
13LOC_Os08g14310:12008.t01306:unspliced-genomic hypothetical p... 33 3.6
14LOC_Os03g59210:12003.t05170:unspliced-genomic expressed protein 33 3.6
15LOC_Os02g34630:12002.t03102:unspliced-genomic myb-like DNA-b... 33 3.6
16LOC_Os06g19390:12006.t01760:unspliced-genomic expressed protein 33 3.6
17LOC_Os07g29210:12007.t02611:unspliced-genomic retrotransposo... 32 4.9
18LOC_Os07g24770:12007.t02173:unspliced-genomic retrotransposo... 32 4.9
19LOC_Os04g51410:12004.t04618:unspliced-genomic expressed protein 32 4.9
20LOC_Os07g30760:12007.t02763:unspliced-genomic anthocyanidin ... 32 6.7
21LOC_Os07g02460:12007.t00137:unspliced-genomic expressed protein 32 6.7
22LOC_Os11g47250:12011.t04200:unspliced-genomic retrotransposo... 31 9.3
23LOC_Os03g55430:12003.t04807:unspliced-genomic expressed protein 31 9.3
24LOC_Os01g56590:12001.t05069:unspliced-genomic HEAT repeat fa... 31 9.3

>LOC_Os05g04680:12005.t00362:unspliced-genomic expressed protein|
          Length = 874
 Score = 68.4 bits (143), Expect(2) = 2e-17
 Identities = 26/35 (74%), Positives = 32/35 (91%)
 Frame = +2 / +1

                                              
Query: 341 TAQLYGDVMACAYEDVQVMWSMLDNKAKVVDTAAS 445
           ++QLYGDVMACAYEDVQVMWSMLDNK+++   AA+
Sbjct: 430 SSQLYGDVMACAYEDVQVMWSMLDNKSRLCAAAAA 534



 Score = 43.7 bits (89), Expect(2) = 2e-17
 Identities = 18/22 (81%), Positives = 19/22 (86%)
 Frame = +2 / +1

                                 
Query: 128 MGSWKRTITSPFRKACTILSPQ 193
           MGSW RTITSPFRKA TIL+ Q
Sbjct: 187 MGSWVRTITSPFRKARTILNQQ 252



 Score = 52.8 bits (109), Expect(2) = 1e-13
 Identities = 24/32 (75%), Positives = 27/32 (84%)
 Frame = -1 / -3

                                           
Query: 441 AAVSTTLALLSSMDHMTCTSS*AHAITSP*SC 346
           AA + +L LLSS+DHMT TSS*AHAITSP SC
Sbjct: 530 AAAAQSLDLLSSIDHMTWTSS*AHAITSPYSC 435



 Score = 46.4 bits (95), Expect(2) = 1e-13
 Identities = 19/22 (86%), Positives = 20/22 (90%)
 Frame = -1 / -3

                                 
Query: 192 CGLRMVQAFLNGDVMVRFQEPI 127
           C LRMV+AFLNGDVMVR QEPI
Sbjct: 251 CWLRMVRAFLNGDVMVRTQEPI 186



 Score = 39.1 bits (79), Expect(2) = 6e-06
 Identities = 16/19 (84%), Positives = 16/19 (84%)
 Frame = -3 / -2

                              
Query: 184 EDGAGLPERRRDGALPRTH 128
           EDGA LPE RRDGA PRTH
Sbjct: 243 EDGACLPEWRRDGANPRTH 187



 Score = 33.6 bits (67), Expect(2) = 6e-06
 Identities = 13/16 (81%), Positives = 13/16 (81%)
 Frame = -3 / -2

                           
Query: 421 GFVVEHGPHDLHVLVG 374
           G VVEH PHDL VLVG
Sbjct: 510 GLVVEHRPHDLDVLVG 463



 Score = 40.0 bits (81), Expect(2) = 2e-04
 Identities = 13/17 (76%), Positives = 15/17 (88%)
 Frame = +1 / +3

                            
Query: 130 GFLEAHHHVAVQEGLHH 180
           GFL +HHHVA+QEG HH
Sbjct: 189 GFLGSHHHVAIQEGTHH 239



 Score = 27.2 bits (53), Expect(2) = 2e-04
 Identities = 11/16 (68%), Positives = 12/16 (75%)
 Frame = +1 / +3

                           
Query: 394 HVVHARQQSQGRRHRR 441
           HVV+ARQQ Q  R RR
Sbjct: 483 HVVYARQQVQALRRRR 530



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>LOC_Os01g18450:12001.t01638:unspliced-genomic expressed protein|
          Length = 342

 Score = 50.6 bits (104), Expect(2) = 1e-11
 Identities = 18/23 (78%), Positives = 22/23 (95%)
 Frame = +2 / +1

                                  
Query: 344 AQLYGDVMACAYEDVQVMWSMLD 412
           ++L+G+VMACAYEDVQVMW MLD
Sbjct: 241 SKLHGEVMACAYEDVQVMWDMLD 309



 Score = 40.0 bits (81), Expect(2) = 1e-11
 Identities = 16/36 (44%), Positives = 21/36 (58%)
 Frame = +2 / +1

                                               
Query: 131 GSWKRTITSPFRKACTILSPQNGGSRSDDQHGGSVN 238
           GSW RTITSPFRK       ++GG R    + G ++
Sbjct: 7   GSWVRTITSPFRKVFGAQPHKDGGKRPQQPNSGKLS 114



 Score = 35.0 bits (70), Expect(2) = 0.022
 Identities = 15/27 (55%), Positives = 21/27 (77%)
 Frame = -1 / -2

                                      
Query: 435 VSTTLALLSSMDHMTCTSS*AHAITSP 355
           +++ +  LSS+ H+T TSS AHAITSP
Sbjct: 332 LNSRILALSSISHIT*TSSYAHAITSP 252



 Score = 24.0 bits (46), Expect(2) = 0.022
 Identities = 9/11 (81%), Positives = 9/11 (81%)
 Frame = -1 / -2

                      
Query: 162 NGDVMVRFQEP 130
           NGDVMVR  EP
Sbjct: 38  NGDVMVRTHEP 6



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>LOC_Os06g44870:12006.t04174:unspliced-genomic expressed protein|
          Length = 1083

 Score = 41.4 bits (84), Expect = 0.009
 Identities = 15/33 (45%), Positives = 21/33 (63%)
 Frame = +2 / +2

                                            
Query: 320 VVESPSTTAQLYGDVMACAYEDVQVMWSMLDNK 418
           +V +      L+ DV  C YEDVQVMW+ML ++
Sbjct: 683 IVNAERGILDLHQDVQTCGYEDVQVMWNMLSSE 781



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>LOC_Os04g56309:12004.t05102:unspliced-genomic hypothetical protein|
          Length = 3988

 Score = 39.6 bits (80), Expect = 0.030
 Identities = 13/21 (61%), Positives = 17/21 (80%)
 Frame = +2 / +1

                                 
Query: 347  QLYGDVMACAYEDVQVMWSML 409
            +L+ D+  CAYEDVQVMW +L
Sbjct: 3421 KLHDDIQTCAYEDVQVMWEIL 3483



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>LOC_Os07g38470:12007.t03512:unspliced-genomic expressed protein|
          Length = 324

 Score = 35.0 bits (70), Expect = 0.73
 Identities = 12/20 (60%), Positives = 16/20 (80%)
 Frame = +2 / +1

                               
Query: 350 LYGDVMACAYEDVQVMWSML 409
           LY DV +C  EDVQ++WS+L
Sbjct: 199 LYEDVKSCPCEDVQILWSIL 258



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>LOC_Os09g31120:12009.t02755:unspliced-genomic pirin-like protein, putative, expressed|
          Length = 2433

 Score = 34.5 bits (69), Expect = 1.0
 Identities = 16/38 (42%), Positives = 19/38 (50%)
 Frame = -3 / -1

                                                  
Query: 646  PCQCRGFISGSTKTKRRRVSGLVVDGLQIEHRRL*MQW 533
            PCQC    S S + KRRR  G VV  + +   RL   W
Sbjct: 1590 PCQCSDTTSESGEKKRRR*QGRVVTHILLWEERLTQSW 1477



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>LOC_Os02g10970:12002.t00945:unspliced-genomic peptidyl-prolyl cis-trans isomerase 1, putative, expressed|
          Length = 8089

 Score = 34.5 bits (69), Expect = 1.0
 Identities = 15/43 (34%), Positives = 23/43 (53%)
 Frame = -1 / +3

                                                       
Query: 651  RYHASAGDSFRAQQKQNGEESQDSSSTVFRLSTGDSECSGCSS 523
            R+H  +    R +++ +  ES+ SS +   LS  DSE   CSS
Sbjct: 4938 RHHKKSSRRRRKKKRYSSSESESSSESESELSDSDSESDTCSS 5066



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>LOC_Os01g57050:12001.t05114:unspliced-genomic expressed protein|
          Length = 1238

 Score = 33.6 bits (67), Expect = 1.9
 Identities = 12/20 (60%), Positives = 15/20 (75%)
 Frame = +2 / +1

                               
Query: 350 LYGDVMACAYEDVQVMWSML 409
           LY DV +C  EDV V+WS+L
Sbjct: 688 LYDDVKSCPCEDVHVLWSIL 747



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>LOC_Os03g51870:12003.t04515:unspliced-genomic kinetoplast-associated protein, putative, expressed|
          Length = 3646

 Score = 31.3 bits (62), Expect(2) = 2.2
 Identities = 9/25 (36%), Positives = 17/25 (68%)
 Frame = +1 / +2

                                     
Query: 757  LPFWCHRWMYSGMQHPIRQSMRRVF 831
            + FWCH  ++S + +P+ Q+ + VF
Sbjct: 2927 IAFWCHTVLFSKLYNPVTQNSQIVF 3001



 Score = 24.0 bits (46), Expect(2) = 2.2
 Identities = 12/31 (38%), Positives = 15/31 (48%)
 Frame = +2 / +1

                                          
Query: 188 PQNGGSRSDDQHGGSVNDGKKTPRTRHHLKR 280
           PQ  GSR +     +V DG+   R R  L R
Sbjct: 733 PQWWGSRRNPLRSPAVADGRTLQRRRWRLSR 825



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>LOC_Os07g10440:12007.t00918:unspliced-genomic expressed protein|
          Length = 937

 Score = 33.1 bits (66), Expect = 2.6
 Identities = 12/20 (60%), Positives = 15/20 (75%)
 Frame = +2 / +1

                               
Query: 350 LYGDVMACAYEDVQVMWSML 409
           LY DV +C  EDV V+WS+L
Sbjct: 307 LYKDVQSCQDEDVHVLWSIL 366



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>LOC_Os03g10860:12003.t00887:unspliced-genomic expressed protein|
          Length = 674

 Score = 33.1 bits (66), Expect = 2.6
 Identities = 12/21 (57%), Positives = 15/21 (71%)
 Frame = +2 / +2

                                
Query: 347 QLYGDVMACAYEDVQVMWSML 409
           +L  +V  C YEDV+VMW ML
Sbjct: 269 RLRQEVSTCEYEDVRVMWEML 331



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>LOC_Os02g12690:12002.t01066:unspliced-genomic cytochrome P450 74A4, putative, expressed|
          Length = 1908

 Score = 33.1 bits (66), Expect = 2.6
 Identities = 19/69 (27%), Positives = 31/69 (44%)
 Frame = -1 / -2

                                                                        
Query: 561  LSTGDSECSGCSSSMYWIDDGTPRPIDRSSVMVDAARGHEAAVSTTLALLSSMDHMTCTS 382
            ++TG S  S  S++       +P  I R +    +  GH    S  + +    DH TC+S
Sbjct: 1547 VTTGSSGSSSTSAANVSYRRNSPATISRPTATTMSFPGHCLFPSDGVPVSGPFDHTTCSS 1368

                     
Query: 381  S*AHAITSP 355
            S   A+ +P
Sbjct: 1367 SGRAALPAP 1341



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>LOC_Os08g14310:12008.t01306:unspliced-genomic hypothetical protein|
          Length = 3750

 Score = 32.7 bits (65), Expect = 3.6
 Identities = 12/24 (50%), Positives = 18/24 (75%)
 Frame = +2 / +1

                                    
Query: 347  QLYGDVMACAYEDVQVMWSMLDNK 418
            +L+ DV  C Y+DVQVM+ ML ++
Sbjct: 3580 KLHEDVQTCDYKDVQVMFEMLTSE 3651



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>LOC_Os03g59210:12003.t05170:unspliced-genomic expressed protein|
          Length = 823

 Score = 32.7 bits (65), Expect = 3.6
 Identities = 12/20 (60%), Positives = 15/20 (75%)
 Frame = +2 / +1

                               
Query: 350 LYGDVMACAYEDVQVMWSML 409
           LY DV +C  EDV V+WS+L
Sbjct: 400 LYKDVKSCQDEDVHVLWSIL 459



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>LOC_Os02g34630:12002.t03102:unspliced-genomic myb-like DNA-binding domain containing protein, expressed|
          Length = 4295

 Score = 32.7 bits (65), Expect = 3.6
 Identities = 11/28 (39%), Positives = 19/28 (67%)
 Frame = +2 / -3

                                       
Query: 449 PRAASTITDDRSMGRGVPSSIQYILLLH 532
           PR + ++TD  ++GRG P S  ++LL +
Sbjct: 204 PRPSRSVTDSSALGRGTPFSSPFLLLYY 121



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>LOC_Os06g19390:12006.t01760:unspliced-genomic expressed protein|
          Length = 3174

 Score = 32.7 bits (65), Expect = 3.6
 Identities = 22/84 (26%), Positives = 37/84 (44%)
 Frame = -1 / +2

                                                                       
Query: 582 SSSTVFRLSTGDSECSGCSSSMYWIDDGTPRPIDRSSVMVDAARGHEAAVSTTLALLSSM 403
           +SS   R S+  + CSG  S  Y     +P  +   +  +       + ++TTL  L+S 
Sbjct: 713 ASSATSRRSSPSASCSG*YSGSYPAASSSPTRLGSRARTLSCPSSPMSRMATTLKRLASR 892

                                   
Query: 402 DHMTCTSS*AHAITSP*SCAVVDG 331
             +T  +S A  I+ P S  +  G
Sbjct: 893 SGLTTMTSPAWLISIPRSSTIPCG 964



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>LOC_Os07g29210:12007.t02611:unspliced-genomic retrotransposon protein, putative, unclassified|
          Length = 591

 Score = 32.2 bits (64), Expect = 4.9
 Identities = 13/24 (54%), Positives = 16/24 (66%)
 Frame = -3 / -3

                                   
Query: 619 GSTKTKRRRVSGLVVDGLQIEHRR 548
           G+T+ +RRR SG VVD  Q  H R
Sbjct: 244 GTTRRRRRRASGEVVDAQQRRHNR 173



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>LOC_Os07g24770:12007.t02173:unspliced-genomic retrotransposon protein, putative, unclassified|
          Length = 6733

 Score = 32.2 bits (64), Expect = 4.9
 Identities = 13/25 (52%), Positives = 17/25 (68%)
 Frame = -3 / -2

                                     
Query: 619  GSTKTKRRRVSGLVVDGLQIEHRRL 545
            G+T+ +RR+V G VVD  Q  H RL
Sbjct: 2757 GTTRRRRRQVGGEVVDAQQQRHNRL 2683



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>LOC_Os04g51410:12004.t04618:unspliced-genomic expressed protein|
          Length = 5522

 Score = 32.2 bits (64), Expect = 4.9
 Identities = 12/30 (40%), Positives = 20/30 (66%)
 Frame = +2 / +3

                                          
Query: 329  SPSTTAQLYGDVMACAYEDVQVMWSMLDNK 418
            S  +  +L+ DV  C Y+DVQVM+ +L ++
Sbjct: 3861 SGGSILKLHEDVQTCGYKDVQVMFEILKSE 3950



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>LOC_Os07g30760:12007.t02763:unspliced-genomic anthocyanidin 3-O-glucosyltransferase, putative, expressed|
          Length = 1703

 Score = 31.8 bits (63), Expect = 6.7
 Identities = 13/39 (33%), Positives = 19/39 (48%)
 Frame = +2 / -2

                                                  
Query: 164 RKACTILSPQNGGSRSDDQHGGSVNDGKKTPRTRHHLKR 280
           R A  +L+PQ GG R    HG    DG+     R  +++
Sbjct: 928 RHAAVVLAPQAGGRRRRGGHGVEWTDGEDVAHARRDVRQ 812



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>LOC_Os07g02460:12007.t00137:unspliced-genomic expressed protein|
          Length = 796

 Score = 31.8 bits (63), Expect = 6.7
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = +2 / +2

                                  
Query: 347 QLYGDVMACAYEDVQVMWSMLDN 415
           +L  +V  C Y DV VMW ML +
Sbjct: 296 KLRNEVRTCEYSDVHVMWEMLSS 364



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>LOC_Os11g47250:12011.t04200:unspliced-genomic retrotransposon protein, putative, unclassified|
          Length = 5529

 Score = 31.3 bits (62), Expect = 9.3
 Identities = 12/24 (50%), Positives = 16/24 (66%)
 Frame = -3 / -2

                                    
Query: 619  GSTKTKRRRVSGLVVDGLQIEHRR 548
            G+T+ +RR+  G VVD LQ  H R
Sbjct: 1034 GTTRRRRRQAGGEVVDALQQRHNR 963



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>LOC_Os03g55430:12003.t04807:unspliced-genomic expressed protein|
          Length = 991

 Score = 31.3 bits (62), Expect = 9.3
 Identities = 14/41 (34%), Positives = 19/41 (46%)
 Frame = +2 / +3

                                                    
Query: 347 QLYGDVMACAYEDVQVMWSMLDNKAKVVDTAAS*PRAASTI 469
           +L  +V  C Y DV +MW ML      V  A     AA+ +
Sbjct: 291 KLKKEVRTCEYHDVHIMWEMLRKTDAPVPMAEKEAAAAAAV 413



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>LOC_Os01g56590:12001.t05069:unspliced-genomic HEAT repeat family protein, expressed|
          Length = 22879

 Score = 31.3 bits (62), Expect = 9.3
 Identities = 12/32 (37%), Positives = 20/32 (62%)
 Frame = +3 / +3

                                            
Query: 498  FHHRSSTYYCYTHCIQSLRCSI*RPSTTSPET 593
            F ++ + +Y   HC+ SLR  I*  +T +P+T
Sbjct: 6537 FQNQYAQFYDLIHCLYSLRSKI*GTTTLNPKT 6632


  Database: tigr.seq.out
    Posted date:  Jul 20, 2007  8:58 AM
  Number of letters in database: 166,841,660
  Number of sequences in database:  56,278
  
Lambda     K      H
   0.318    0.134    0.401 


Matrix: BLOSUM62
Number of Sequences: 56278
Number of Hits to DB: 284,459,662
Number of extensions: 4224908
Number of successful extensions: 16294
Number of sequences better than 10.0: 24
Length of query: 283
Length of database: 55,613,886
Length adjustment: 49
Effective length of query: 234
Effective length of database: 52,856,264
Effective search space: 12368365776
Effective search space used: 12368365776
Neighboring words threshold: 13
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
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