| Clone Name | FLbaf131e11 |
|---|---|
| Clone Library Name | barley_pub |
>LOC_Os05g04680:12005.t00362:unspliced-genomic expressed protein| Length = 874 Score = 68.4 bits (143), Expect(2) = 2e-17 Identities = 26/35 (74%), Positives = 32/35 (91%) Frame = +2 / +1 Query: 341 TAQLYGDVMACAYEDVQVMWSMLDNKAKVVDTAAS 445 ++QLYGDVMACAYEDVQVMWSMLDNK+++ AA+ Sbjct: 430 SSQLYGDVMACAYEDVQVMWSMLDNKSRLCAAAAA 534 Score = 43.7 bits (89), Expect(2) = 2e-17 Identities = 18/22 (81%), Positives = 19/22 (86%) Frame = +2 / +1 Query: 128 MGSWKRTITSPFRKACTILSPQ 193 MGSW RTITSPFRKA TIL+ Q Sbjct: 187 MGSWVRTITSPFRKARTILNQQ 252 Score = 52.8 bits (109), Expect(2) = 1e-13 Identities = 24/32 (75%), Positives = 27/32 (84%) Frame = -1 / -3 Query: 441 AAVSTTLALLSSMDHMTCTSS*AHAITSP*SC 346 AA + +L LLSS+DHMT TSS*AHAITSP SC Sbjct: 530 AAAAQSLDLLSSIDHMTWTSS*AHAITSPYSC 435 Score = 46.4 bits (95), Expect(2) = 1e-13 Identities = 19/22 (86%), Positives = 20/22 (90%) Frame = -1 / -3 Query: 192 CGLRMVQAFLNGDVMVRFQEPI 127 C LRMV+AFLNGDVMVR QEPI Sbjct: 251 CWLRMVRAFLNGDVMVRTQEPI 186 Score = 39.1 bits (79), Expect(2) = 6e-06 Identities = 16/19 (84%), Positives = 16/19 (84%) Frame = -3 / -2 Query: 184 EDGAGLPERRRDGALPRTH 128 EDGA LPE RRDGA PRTH Sbjct: 243 EDGACLPEWRRDGANPRTH 187 Score = 33.6 bits (67), Expect(2) = 6e-06 Identities = 13/16 (81%), Positives = 13/16 (81%) Frame = -3 / -2 Query: 421 GFVVEHGPHDLHVLVG 374 G VVEH PHDL VLVG Sbjct: 510 GLVVEHRPHDLDVLVG 463 Score = 40.0 bits (81), Expect(2) = 2e-04 Identities = 13/17 (76%), Positives = 15/17 (88%) Frame = +1 / +3 Query: 130 GFLEAHHHVAVQEGLHH 180 GFL +HHHVA+QEG HH Sbjct: 189 GFLGSHHHVAIQEGTHH 239 Score = 27.2 bits (53), Expect(2) = 2e-04 Identities = 11/16 (68%), Positives = 12/16 (75%) Frame = +1 / +3 Query: 394 HVVHARQQSQGRRHRR 441 HVV+ARQQ Q R RR Sbjct: 483 HVVYARQQVQALRRRR 530
>LOC_Os01g18450:12001.t01638:unspliced-genomic expressed protein| Length = 342 Score = 50.6 bits (104), Expect(2) = 1e-11 Identities = 18/23 (78%), Positives = 22/23 (95%) Frame = +2 / +1 Query: 344 AQLYGDVMACAYEDVQVMWSMLD 412 ++L+G+VMACAYEDVQVMW MLD Sbjct: 241 SKLHGEVMACAYEDVQVMWDMLD 309 Score = 40.0 bits (81), Expect(2) = 1e-11 Identities = 16/36 (44%), Positives = 21/36 (58%) Frame = +2 / +1 Query: 131 GSWKRTITSPFRKACTILSPQNGGSRSDDQHGGSVN 238 GSW RTITSPFRK ++GG R + G ++ Sbjct: 7 GSWVRTITSPFRKVFGAQPHKDGGKRPQQPNSGKLS 114 Score = 35.0 bits (70), Expect(2) = 0.022 Identities = 15/27 (55%), Positives = 21/27 (77%) Frame = -1 / -2 Query: 435 VSTTLALLSSMDHMTCTSS*AHAITSP 355 +++ + LSS+ H+T TSS AHAITSP Sbjct: 332 LNSRILALSSISHIT*TSSYAHAITSP 252 Score = 24.0 bits (46), Expect(2) = 0.022 Identities = 9/11 (81%), Positives = 9/11 (81%) Frame = -1 / -2 Query: 162 NGDVMVRFQEP 130 NGDVMVR EP Sbjct: 38 NGDVMVRTHEP 6
>LOC_Os06g44870:12006.t04174:unspliced-genomic expressed protein| Length = 1083 Score = 41.4 bits (84), Expect = 0.009 Identities = 15/33 (45%), Positives = 21/33 (63%) Frame = +2 / +2 Query: 320 VVESPSTTAQLYGDVMACAYEDVQVMWSMLDNK 418 +V + L+ DV C YEDVQVMW+ML ++ Sbjct: 683 IVNAERGILDLHQDVQTCGYEDVQVMWNMLSSE 781
>LOC_Os04g56309:12004.t05102:unspliced-genomic hypothetical protein| Length = 3988 Score = 39.6 bits (80), Expect = 0.030 Identities = 13/21 (61%), Positives = 17/21 (80%) Frame = +2 / +1 Query: 347 QLYGDVMACAYEDVQVMWSML 409 +L+ D+ CAYEDVQVMW +L Sbjct: 3421 KLHDDIQTCAYEDVQVMWEIL 3483
>LOC_Os07g38470:12007.t03512:unspliced-genomic expressed protein| Length = 324 Score = 35.0 bits (70), Expect = 0.73 Identities = 12/20 (60%), Positives = 16/20 (80%) Frame = +2 / +1 Query: 350 LYGDVMACAYEDVQVMWSML 409 LY DV +C EDVQ++WS+L Sbjct: 199 LYEDVKSCPCEDVQILWSIL 258
>LOC_Os09g31120:12009.t02755:unspliced-genomic pirin-like protein, putative, expressed| Length = 2433 Score = 34.5 bits (69), Expect = 1.0 Identities = 16/38 (42%), Positives = 19/38 (50%) Frame = -3 / -1 Query: 646 PCQCRGFISGSTKTKRRRVSGLVVDGLQIEHRRL*MQW 533 PCQC S S + KRRR G VV + + RL W Sbjct: 1590 PCQCSDTTSESGEKKRRR*QGRVVTHILLWEERLTQSW 1477
>LOC_Os02g10970:12002.t00945:unspliced-genomic peptidyl-prolyl cis-trans isomerase 1, putative, expressed| Length = 8089 Score = 34.5 bits (69), Expect = 1.0 Identities = 15/43 (34%), Positives = 23/43 (53%) Frame = -1 / +3 Query: 651 RYHASAGDSFRAQQKQNGEESQDSSSTVFRLSTGDSECSGCSS 523 R+H + R +++ + ES+ SS + LS DSE CSS Sbjct: 4938 RHHKKSSRRRRKKKRYSSSESESSSESESELSDSDSESDTCSS 5066
>LOC_Os01g57050:12001.t05114:unspliced-genomic expressed protein| Length = 1238 Score = 33.6 bits (67), Expect = 1.9 Identities = 12/20 (60%), Positives = 15/20 (75%) Frame = +2 / +1 Query: 350 LYGDVMACAYEDVQVMWSML 409 LY DV +C EDV V+WS+L Sbjct: 688 LYDDVKSCPCEDVHVLWSIL 747
>LOC_Os03g51870:12003.t04515:unspliced-genomic kinetoplast-associated protein, putative, expressed| Length = 3646 Score = 31.3 bits (62), Expect(2) = 2.2 Identities = 9/25 (36%), Positives = 17/25 (68%) Frame = +1 / +2 Query: 757 LPFWCHRWMYSGMQHPIRQSMRRVF 831 + FWCH ++S + +P+ Q+ + VF Sbjct: 2927 IAFWCHTVLFSKLYNPVTQNSQIVF 3001 Score = 24.0 bits (46), Expect(2) = 2.2 Identities = 12/31 (38%), Positives = 15/31 (48%) Frame = +2 / +1 Query: 188 PQNGGSRSDDQHGGSVNDGKKTPRTRHHLKR 280 PQ GSR + +V DG+ R R L R Sbjct: 733 PQWWGSRRNPLRSPAVADGRTLQRRRWRLSR 825
>LOC_Os07g10440:12007.t00918:unspliced-genomic expressed protein| Length = 937 Score = 33.1 bits (66), Expect = 2.6 Identities = 12/20 (60%), Positives = 15/20 (75%) Frame = +2 / +1 Query: 350 LYGDVMACAYEDVQVMWSML 409 LY DV +C EDV V+WS+L Sbjct: 307 LYKDVQSCQDEDVHVLWSIL 366
>LOC_Os03g10860:12003.t00887:unspliced-genomic expressed protein| Length = 674 Score = 33.1 bits (66), Expect = 2.6 Identities = 12/21 (57%), Positives = 15/21 (71%) Frame = +2 / +2 Query: 347 QLYGDVMACAYEDVQVMWSML 409 +L +V C YEDV+VMW ML Sbjct: 269 RLRQEVSTCEYEDVRVMWEML 331
>LOC_Os02g12690:12002.t01066:unspliced-genomic cytochrome P450 74A4, putative, expressed| Length = 1908 Score = 33.1 bits (66), Expect = 2.6 Identities = 19/69 (27%), Positives = 31/69 (44%) Frame = -1 / -2 Query: 561 LSTGDSECSGCSSSMYWIDDGTPRPIDRSSVMVDAARGHEAAVSTTLALLSSMDHMTCTS 382 ++TG S S S++ +P I R + + GH S + + DH TC+S Sbjct: 1547 VTTGSSGSSSTSAANVSYRRNSPATISRPTATTMSFPGHCLFPSDGVPVSGPFDHTTCSS 1368 Query: 381 S*AHAITSP 355 S A+ +P Sbjct: 1367 SGRAALPAP 1341
>LOC_Os08g14310:12008.t01306:unspliced-genomic hypothetical protein| Length = 3750 Score = 32.7 bits (65), Expect = 3.6 Identities = 12/24 (50%), Positives = 18/24 (75%) Frame = +2 / +1 Query: 347 QLYGDVMACAYEDVQVMWSMLDNK 418 +L+ DV C Y+DVQVM+ ML ++ Sbjct: 3580 KLHEDVQTCDYKDVQVMFEMLTSE 3651
>LOC_Os03g59210:12003.t05170:unspliced-genomic expressed protein| Length = 823 Score = 32.7 bits (65), Expect = 3.6 Identities = 12/20 (60%), Positives = 15/20 (75%) Frame = +2 / +1 Query: 350 LYGDVMACAYEDVQVMWSML 409 LY DV +C EDV V+WS+L Sbjct: 400 LYKDVKSCQDEDVHVLWSIL 459
>LOC_Os02g34630:12002.t03102:unspliced-genomic myb-like DNA-binding domain containing protein, expressed| Length = 4295 Score = 32.7 bits (65), Expect = 3.6 Identities = 11/28 (39%), Positives = 19/28 (67%) Frame = +2 / -3 Query: 449 PRAASTITDDRSMGRGVPSSIQYILLLH 532 PR + ++TD ++GRG P S ++LL + Sbjct: 204 PRPSRSVTDSSALGRGTPFSSPFLLLYY 121
>LOC_Os06g19390:12006.t01760:unspliced-genomic expressed protein| Length = 3174 Score = 32.7 bits (65), Expect = 3.6 Identities = 22/84 (26%), Positives = 37/84 (44%) Frame = -1 / +2 Query: 582 SSSTVFRLSTGDSECSGCSSSMYWIDDGTPRPIDRSSVMVDAARGHEAAVSTTLALLSSM 403 +SS R S+ + CSG S Y +P + + + + ++TTL L+S Sbjct: 713 ASSATSRRSSPSASCSG*YSGSYPAASSSPTRLGSRARTLSCPSSPMSRMATTLKRLASR 892 Query: 402 DHMTCTSS*AHAITSP*SCAVVDG 331 +T +S A I+ P S + G Sbjct: 893 SGLTTMTSPAWLISIPRSSTIPCG 964
>LOC_Os07g29210:12007.t02611:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 591 Score = 32.2 bits (64), Expect = 4.9 Identities = 13/24 (54%), Positives = 16/24 (66%) Frame = -3 / -3 Query: 619 GSTKTKRRRVSGLVVDGLQIEHRR 548 G+T+ +RRR SG VVD Q H R Sbjct: 244 GTTRRRRRRASGEVVDAQQRRHNR 173
>LOC_Os07g24770:12007.t02173:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 6733 Score = 32.2 bits (64), Expect = 4.9 Identities = 13/25 (52%), Positives = 17/25 (68%) Frame = -3 / -2 Query: 619 GSTKTKRRRVSGLVVDGLQIEHRRL 545 G+T+ +RR+V G VVD Q H RL Sbjct: 2757 GTTRRRRRQVGGEVVDAQQQRHNRL 2683
>LOC_Os04g51410:12004.t04618:unspliced-genomic expressed protein| Length = 5522 Score = 32.2 bits (64), Expect = 4.9 Identities = 12/30 (40%), Positives = 20/30 (66%) Frame = +2 / +3 Query: 329 SPSTTAQLYGDVMACAYEDVQVMWSMLDNK 418 S + +L+ DV C Y+DVQVM+ +L ++ Sbjct: 3861 SGGSILKLHEDVQTCGYKDVQVMFEILKSE 3950
>LOC_Os07g30760:12007.t02763:unspliced-genomic anthocyanidin 3-O-glucosyltransferase, putative, expressed| Length = 1703 Score = 31.8 bits (63), Expect = 6.7 Identities = 13/39 (33%), Positives = 19/39 (48%) Frame = +2 / -2 Query: 164 RKACTILSPQNGGSRSDDQHGGSVNDGKKTPRTRHHLKR 280 R A +L+PQ GG R HG DG+ R +++ Sbjct: 928 RHAAVVLAPQAGGRRRRGGHGVEWTDGEDVAHARRDVRQ 812
>LOC_Os07g02460:12007.t00137:unspliced-genomic expressed protein| Length = 796 Score = 31.8 bits (63), Expect = 6.7 Identities = 11/23 (47%), Positives = 14/23 (60%) Frame = +2 / +2 Query: 347 QLYGDVMACAYEDVQVMWSMLDN 415 +L +V C Y DV VMW ML + Sbjct: 296 KLRNEVRTCEYSDVHVMWEMLSS 364
>LOC_Os11g47250:12011.t04200:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 5529 Score = 31.3 bits (62), Expect = 9.3 Identities = 12/24 (50%), Positives = 16/24 (66%) Frame = -3 / -2 Query: 619 GSTKTKRRRVSGLVVDGLQIEHRR 548 G+T+ +RR+ G VVD LQ H R Sbjct: 1034 GTTRRRRRQAGGEVVDALQQRHNR 963
>LOC_Os03g55430:12003.t04807:unspliced-genomic expressed protein| Length = 991 Score = 31.3 bits (62), Expect = 9.3 Identities = 14/41 (34%), Positives = 19/41 (46%) Frame = +2 / +3 Query: 347 QLYGDVMACAYEDVQVMWSMLDNKAKVVDTAAS*PRAASTI 469 +L +V C Y DV +MW ML V A AA+ + Sbjct: 291 KLKKEVRTCEYHDVHIMWEMLRKTDAPVPMAEKEAAAAAAV 413
>LOC_Os01g56590:12001.t05069:unspliced-genomic HEAT repeat family protein, expressed| Length = 22879 Score = 31.3 bits (62), Expect = 9.3 Identities = 12/32 (37%), Positives = 20/32 (62%) Frame = +3 / +3 Query: 498 FHHRSSTYYCYTHCIQSLRCSI*RPSTTSPET 593 F ++ + +Y HC+ SLR I* +T +P+T Sbjct: 6537 FQNQYAQFYDLIHCLYSLRSKI*GTTTLNPKT 6632 Database: tigr.seq.out Posted date: Jul 20, 2007 8:58 AM Number of letters in database: 166,841,660 Number of sequences in database: 56,278 Lambda K H 0.318 0.134 0.401 Matrix: BLOSUM62 Number of Sequences: 56278 Number of Hits to DB: 284,459,662 Number of extensions: 4224908 Number of successful extensions: 16294 Number of sequences better than 10.0: 24 Length of query: 283 Length of database: 55,613,886 Length adjustment: 49 Effective length of query: 234 Effective length of database: 52,856,264 Effective search space: 12368365776 Effective search space used: 12368365776 Neighboring words threshold: 13 Window for multiple hits: 40 X1: 16 ( 7.3 bits)