ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf131c12 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK106516:Os09g0401900 | 367 | e-101 | 2 | AK103519:Os09g0401900 | 367 | e-101 | 3 | AK101788:Os04g0376600 | 160 | 2e-39 | 4 | AK108783:Os01g0918100 | 108 | 9e-24 | 5 | AK111454:Os01g0928400 | 30 | 5.4 | 6 | Os11g0708900:Os11g0708900 | 29 | 7.1 | 7 | Os07g0514400:Os07g0514400 | 29 | 7.1 | 8 | AK072038:Os04g0613800 | 29 | 9.3 | 9 | AK070022:Os04g0613800 | 29 | 9.3 | 10 | AK060828:Os04g0613800 | 29 | 9.3 |
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>AK106516:Os09g0401900 | Length = 295 Score = 367 bits (941), Expect = e-101 Identities = 190/289 (65%), Positives = 221/289 (76%), Gaps = 1/289 (0%) Frame = +3 Query: 318 LWDWQEKEHGEPSEGNHDVAKFVWXXXXXXXXXXXXXXXXGNQTPLRDCPAFFDIGDITC 497 LWDWQ EH E + +HDV++F+W GNQTPLRDC FFDI D TC Sbjct: 10 LWDWQAAEHCESNAASHDVSRFMWDCLNQDDDDLLGLL--GNQTPLRDCRGFFDIDDFTC 67 Query: 498 KETLDLEESRESKRRRVLEYPSEVNQPEVGDHKMGSSFVTSEVAESSLLCTDEPQSLNWN 677 KETLDLEESRESKRRR+LEYPSE NQ E G+ ++ S+ TSEV+E SLLCTDEPQS NW+ Sbjct: 68 KETLDLEESRESKRRRILEYPSESNQSEDGNREISSTLGTSEVSEISLLCTDEPQSFNWD 127 Query: 678 MQLNPDNFSSLSNGASYEPSDNQLENYSEGATIYYTPDQMPSSQESVTYIGCQTDVPGTS 857 Q N +NF SLS GA Y+ S + +N S+ +++ DQM SSQESVTY Q+ + GT+ Sbjct: 128 SQNNSNNFDSLSTGAFYQSSHSHSKNCSDENQMHFRHDQMHSSQESVTYTNDQSGISGTT 187 Query: 858 EIAPVTESLIMQETRKLSTLKVSKGGSSMAKVKQNVTTSIAYPFTLIKPSWEEGDV-TLK 1034 E VTESL+MQETRKLSTLKVSK G+S+ K KQN+TT+IAYPFTLIKPSWEEGDV TLK Sbjct: 188 ENDSVTESLVMQETRKLSTLKVSK-GASLVKAKQNLTTTIAYPFTLIKPSWEEGDVITLK 246 Query: 1035 DINQRIHAPPKKPPEILETSAFSGKPVIGKTRIRTEGGKGSITILRTKG 1181 DINQRI APPKK PE L TSAFSGKPV+GKTRIRT+GG+GSITILRTKG Sbjct: 247 DINQRIRAPPKKAPETLGTSAFSGKPVVGKTRIRTDGGRGSITILRTKG 295
>AK103519:Os09g0401900 | Length = 295 Score = 367 bits (941), Expect = e-101 Identities = 190/289 (65%), Positives = 221/289 (76%), Gaps = 1/289 (0%) Frame = +3 Query: 318 LWDWQEKEHGEPSEGNHDVAKFVWXXXXXXXXXXXXXXXXGNQTPLRDCPAFFDIGDITC 497 LWDWQ EH E + +HDV++F+W GNQTPLRDC FFDI D TC Sbjct: 10 LWDWQAAEHCESNAASHDVSRFMWDCLNQDDDDLLGLL--GNQTPLRDCRGFFDIDDFTC 67 Query: 498 KETLDLEESRESKRRRVLEYPSEVNQPEVGDHKMGSSFVTSEVAESSLLCTDEPQSLNWN 677 KETLDLEESRESKRRR+LEYPSE NQ E G+ ++ S+ TSEV+E SLLCTDEPQS NW+ Sbjct: 68 KETLDLEESRESKRRRILEYPSESNQSEDGNREISSTLGTSEVSEISLLCTDEPQSFNWD 127 Query: 678 MQLNPDNFSSLSNGASYEPSDNQLENYSEGATIYYTPDQMPSSQESVTYIGCQTDVPGTS 857 Q N +NF SLS GA Y+ S + +N S+ +++ DQM SSQESVTY Q+ + GT+ Sbjct: 128 SQNNSNNFDSLSTGAFYQSSHSHSKNCSDENQMHFRHDQMHSSQESVTYTNDQSGISGTT 187 Query: 858 EIAPVTESLIMQETRKLSTLKVSKGGSSMAKVKQNVTTSIAYPFTLIKPSWEEGDV-TLK 1034 E VTESL+MQETRKLSTLKVSK G+S+ K KQN+TT+IAYPFTLIKPSWEEGDV TLK Sbjct: 188 ENDSVTESLVMQETRKLSTLKVSK-GASLVKAKQNLTTTIAYPFTLIKPSWEEGDVITLK 246 Query: 1035 DINQRIHAPPKKPPEILETSAFSGKPVIGKTRIRTEGGKGSITILRTKG 1181 DINQRI APPKK PE L TSAFSGKPV+GKTRIRT+GG+GSITILRTKG Sbjct: 247 DINQRIRAPPKKAPETLGTSAFSGKPVVGKTRIRTDGGRGSITILRTKG 295
>AK101788:Os04g0376600 | Length = 169 Score = 160 bits (405), Expect = 2e-39 Identities = 79/130 (60%), Positives = 91/130 (70%) Frame = +3 Query: 312 QILWDWQEKEHGEPSEGNHDVAKFVWXXXXXXXXXXXXXXXXGNQTPLRDCPAFFDIGDI 491 QILWDWQ E E + NHDV++F+W GNQTPLRDC FFDI D Sbjct: 20 QILWDWQAAEQCESNAANHDVSRFMWDCLNQDDDDLLGLL--GNQTPLRDCRGFFDIDDF 77 Query: 492 TCKETLDLEESRESKRRRVLEYPSEVNQPEVGDHKMGSSFVTSEVAESSLLCTDEPQSLN 671 TCKETLDLEESRESKRRR+LEYPSE NQ E G+ ++ S+ TSEV+E SLLCTDEPQS N Sbjct: 78 TCKETLDLEESRESKRRRILEYPSESNQSEDGNREISSTLGTSEVSEISLLCTDEPQSFN 137 Query: 672 WNMQLNPDNF 701 W+ Q N +NF Sbjct: 138 WDSQNNSNNF 147
>AK108783:Os01g0918100 | Length = 296 Score = 108 bits (270), Expect = 9e-24 Identities = 90/304 (29%), Positives = 141/304 (46%), Gaps = 16/304 (5%) Frame = +3 Query: 318 LWDWQEKEHGEP----SEGNHDVAKFVWXXXXXXXXXXXXXXXXGNQTPLRDCP----AF 473 +W WQ +E+ +E D + +W QTP++ C F Sbjct: 13 MWGWQSQEYDLQKDLLAEEAADPSSCLWSEANQNAGDAWTMFD--EQTPIKHCTDIDFQF 70 Query: 474 FDIGDITCKETLDLEESRESKRRRVLEYPSEVNQPEVGDHKMGSSFVTSEVAESSLLCTD 653 DIGDI K+ + +E+ ++KRRR+L++ S+ + +M + ++E+ Sbjct: 71 CDIGDIIVKDFDEGKETLQAKRRRMLQFCSD-------NVEMDCAMAADGLSEN------ 117 Query: 654 EPQSLNWNMQLNPDNFSSLSNGASYEPSDNQLENYSEGATIYYTPDQMPSSQESVTYIGC 833 L N+ + D +G P + ++ + + P+ M S Sbjct: 118 ----LQLNLGFSGDQCLLNCDGTEELPEEWLVDCSPQESEPQCPPEDMSVHLSSPAVAME 173 Query: 834 QTDVPGTSEIAPVTESLIMQETRKLSTLKVSKGGSSMAKVKQNVTTSIAYPFTLIKPSWE 1013 + ++ + + +Q+ + K G ++ + ++ V TS+ YPF LIKP Sbjct: 174 EANLSVHKNSSSREQGNTVQKNTVQARPTPLKAGKNIIRARK-VKTSVVYPFELIKPCGF 232 Query: 1014 EGDVTLKDINQRIHAPP------KKPPEIL--ETSAFSGKPVIGKTRIRTEGGKGSITIL 1169 GDVTL DINQRIHAPP K E L +TSA SGKPV+ KT+I TEGGKGSITI Sbjct: 233 HGDVTLHDINQRIHAPPPYKIKHKIDEEQLSYQTSAISGKPVVHKTKIHTEGGKGSITIT 292 Query: 1170 RTKG 1181 RT+G Sbjct: 293 RTRG 296
>AK111454:Os01g0928400 | Length = 307 Score = 29.6 bits (65), Expect = 5.4 Identities = 20/59 (33%), Positives = 23/59 (38%) Frame = -2 Query: 582 LLAD*PQKGTPARVAALIPETPPGLVSPCR*YPQYQRRPGSLAEEFDFPVIQVAHHHHH 406 L A P PA AA TP QY RP F P+++ HHHHH Sbjct: 116 LAAAAPTATAPAAAAAPSSSTPTAPELDVFAAKQYNGRPPL----FPLPILRSYHHHHH 170
>Os11g0708900:Os11g0708900 | Length = 700 Score = 29.3 bits (64), Expect = 7.1 Identities = 24/75 (32%), Positives = 32/75 (42%), Gaps = 13/75 (17%) Frame = -2 Query: 594 YDHQLLAD*PQKGTPARVAALIPETPPGLVSPCR*YPQYQ-------------RRPGSLA 454 ++ QL A P + AR AA+ T P +S CR YP Y+ + S Sbjct: 608 FEQQLRAVLPDEVEAAR-AAVESGTAPNRISDCRSYPLYRFVRKELGAEYLTGEKTRSPG 666 Query: 453 EEFDFPVIQVAHHHH 409 EE D VI + H H Sbjct: 667 EEVDKVVIAMNQHKH 681
>Os07g0514400:Os07g0514400 | Length = 770 Score = 29.3 bits (64), Expect = 7.1 Identities = 16/48 (33%), Positives = 26/48 (54%) Frame = +1 Query: 388 GIASTEMMMMMSYLDYWEIKLLCETARPSLILGISPARRH*TWRSLGN 531 G A EM+++ + +DYW+ LL +T + + ISP + W L N Sbjct: 442 GSARVEMLLIDAEVDYWKESLL-KTCQVDCLAVISPIAKACLWAKLVN 488
>AK072038:Os04g0613800 | Length = 394 Score = 28.9 bits (63), Expect = 9.3 Identities = 20/71 (28%), Positives = 29/71 (40%) Frame = +3 Query: 726 YEPSDNQLENYSEGATIYYTPDQMPSSQESVTYIGCQTDVPGTSEIAPVTESLIMQETRK 905 Y P NQ + +G T Y P M + Q DV E VT +++Q RK Sbjct: 43 YRPRKNQSGSRVKGDTFYIDPTNMYEFRS-------QKDVQRYLESGDVTNCVMIQNKRK 95 Query: 906 LSTLKVSKGGS 938 + L ++ S Sbjct: 96 MEDLHTARNQS 106
>AK070022:Os04g0613800 | Length = 394 Score = 28.9 bits (63), Expect = 9.3 Identities = 20/71 (28%), Positives = 29/71 (40%) Frame = +3 Query: 726 YEPSDNQLENYSEGATIYYTPDQMPSSQESVTYIGCQTDVPGTSEIAPVTESLIMQETRK 905 Y P NQ + +G T Y P M + Q DV E VT +++Q RK Sbjct: 43 YRPRKNQSGSRVKGDTFYIDPTNMYEFRS-------QKDVQRYLESGDVTNCVMIQNKRK 95 Query: 906 LSTLKVSKGGS 938 + L ++ S Sbjct: 96 MEDLHTARNQS 106
>AK060828:Os04g0613800 | Length = 353 Score = 28.9 bits (63), Expect = 9.3 Identities = 20/71 (28%), Positives = 29/71 (40%) Frame = +3 Query: 726 YEPSDNQLENYSEGATIYYTPDQMPSSQESVTYIGCQTDVPGTSEIAPVTESLIMQETRK 905 Y P NQ + +G T Y P M + Q DV E VT +++Q RK Sbjct: 2 YRPRKNQSGSRVKGDTFYIDPTNMYEFRS-------QKDVQRYLESGDVTNCVMIQNKRK 54 Query: 906 LSTLKVSKGGS 938 + L ++ S Sbjct: 55 MEDLHTARNQS 65 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 37,846,738 Number of extensions: 838381 Number of successful extensions: 2445 Number of sequences better than 10.0: 10 Number of HSP's gapped: 2426 Number of HSP's successfully gapped: 11 Length of query: 470 Length of database: 15,399,855 Length adjustment: 104 Effective length of query: 366 Effective length of database: 11,235,591 Effective search space: 4112226306 Effective search space used: 4112226306 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
