ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf131c12
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1O60271:JIP4_HUMAN C-jun-amino-terminal kinase-interacting protei... 34 1.3
2Q9UBW5:BIN2_HUMAN Bridging integrator 2 - Homo sapiens (Human) 34 1.7
3P35177:SPT7_YEAST Transcriptional activator SPT7 - Saccharomyces... 33 2.9
4Q4JVZ0:THIC_CORJK Thiamine biosynthesis protein thiC - Corynebac... 33 3.8
5Q09863:YAFA_SCHPO Uncharacterized protein C29E6.10c - Schizosacc... 32 6.4
6Q920G3:SIGL5_MOUSE Sialic acid-binding Ig-like lectin 5 precurso... 32 6.4
7Q92BB9:ARGB_LISIN Acetylglutamate kinase - Listeria innocua 32 6.4
8Q9SYJ2:GPAT3_ARATH Probable glycerol-3-phosphate acyltransferase... 32 6.5
9Q0V8R6:HEXA_BOVIN Beta-hexosaminidase alpha chain precursor - Bo... 32 8.4
10P14776:DHSS_SYNP1 Soluble hydrogenase, small subunit - Synechoco... 32 8.4
11Q5XX08:NCAP_EBOSU Nucleoprotein - Sudan ebolavirus (strain Ugand... 32 8.4
12Q9QP77:NCAP_EBOSB Nucleoprotein - Sudan ebolavirus (strain Bonif... 32 8.4

>O60271:JIP4_HUMAN C-jun-amino-terminal kinase-interacting protein 4 - Homo sapiens|
           (Human)
          Length = 1321
 Score = 34.3 bits (77), Expect = 1.3
 Identities = 26/74 (35%), Positives = 36/74 (48%)
 Frame = +3

Query: 693 DNFSSLSNGASYEPSDNQLENYSEGATIYYTPDQMPSSQESVTYIGCQTDVPGTSEIAPV 872
           D  S +S G S   +     N S+ ATI   P   P  +E+  ++   TD P  SEI+  
Sbjct: 262 DELSDVSQGGSKATTPASTAN-SDVATI---PTDTPLKEENEGFVKV-TDAPNKSEISKH 316

Query: 873 TESLIMQETRKLST 914
            E  + QETR +ST
Sbjct: 317 IEVQVAQETRNVST 330



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>Q9UBW5:BIN2_HUMAN Bridging integrator 2 - Homo sapiens (Human)|
          Length = 565

 Score = 33.9 bits (76), Expect = 1.7
 Identities = 51/190 (26%), Positives = 74/190 (38%), Gaps = 3/190 (1%)
 Frame = +3

Query: 603  SSFVTSEVAESSLLCTDEPQSLNWNMQLNPDNFSSLSNGASYEPSDNQLENYSEGATIYY 782
            SS +TS  + S+L    E +S++    L PD        A+    +++++   E   I  
Sbjct: 272  SSPLTSPTSPSTLSLKSESESVSATEDLAPD--------AAQGEDNSEIKELLEEEEIEK 323

Query: 783  TPDQMPSSQESVTYIGCQTDVPGTSEIAPVTESLIMQETRKLSTLKVSKGGSSMAKVKQN 962
               +  SS+E      C    P  ++ +P TE    QE    S+   S GG   A     
Sbjct: 324  EGSEASSSEEDEPLPACNG--PAQAQPSPTTERAKSQEEVLPSSTTPSPGG---ALSPSG 378

Query: 963  VTTSIAYPFTLIKPSWEEGDVTLKDIN--QRIHAPPKKPPEILETSAFSGKPVIGK-TRI 1133
              +S A    L   +  EG    K     QR  APP +PP    T+  S +P  G     
Sbjct: 379  QPSSSATEVVLRTRTASEGSEQPKKRASIQRTSAPPSRPPPPRATA--SPRPSSGNIPSS 436

Query: 1134 RTEGGKGSIT 1163
             T  G GS T
Sbjct: 437  PTASGGGSPT 446



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>P35177:SPT7_YEAST Transcriptional activator SPT7 - Saccharomyces cerevisiae (Baker's|
            yeast)
          Length = 1332

 Score = 33.1 bits (74), Expect = 2.9
 Identities = 31/134 (23%), Positives = 53/134 (39%)
 Frame = +3

Query: 630  ESSLLCTDEPQSLNWNMQLNPDNFSSLSNGASYEPSDNQLENYSEGATIYYTPDQMPSSQ 809
            E +LL  +E +         P N   +S  A  E  D++ ENY E +T     D  P + 
Sbjct: 203  EYTLLDVEEKEEEEIGKNEKPQNKEGISKFAEDEDYDDEDENYDEDSTDVKNVDDPPKNL 262

Query: 810  ESVTYIGCQTDVPGTSEIAPVTESLIMQETRKLSTLKVSKGGSSMAKVKQNVTTSIAYPF 989
            +S++    + D                 E R +  + +SK   +++K+K N    I   +
Sbjct: 263  DSISSSNIEID----------------DERRLVLNISISK--ETLSKLKTNNVEEIMGNW 304

Query: 990  TLIKPSWEEGDVTL 1031
              I  S+E    T+
Sbjct: 305  NKIYHSFEYDKETM 318



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>Q4JVZ0:THIC_CORJK Thiamine biosynthesis protein thiC - Corynebacterium jeikeium|
           (strain K411)
          Length = 641

 Score = 32.7 bits (73), Expect = 3.8
 Identities = 37/170 (21%), Positives = 69/170 (40%), Gaps = 17/170 (10%)
 Frame = +3

Query: 489 ITCKETLDLEESRESKRRRVLEYPSEVNQPEVGDHKMGSSFVT---SEVAESSLLCT--D 653
           +  +E  D+E+ RE         P+ +N PE     +G++F T   + +  S++  +  +
Sbjct: 153 VALREHCDVEKVREQVASGKAIIPNNINHPESEPMIIGNAFTTKINANIGNSAVTSSIRE 212

Query: 654 EPQSLNWNMQLNPDNFSSLSNGASYEPSDNQLENYSE----GATIYYTPDQMPSSQESVT 821
           E   L W  +   D    LS G     +   +   S        IY   +++    E +T
Sbjct: 213 EVDKLRWATRWGADTVMDLSTGNDIHTTREWILRNSPVPIGTVPIYQALEKVDGVAEDLT 272

Query: 822 Y--------IGCQTDVPGTSEIAPVTESLIMQETRKLSTLKVSKGGSSMA 947
           +          C+  V   +  A V    +   T++++ + VS+GGS MA
Sbjct: 273 WEIFRDTVIEQCEQGVDYMTIHAGVRLPFVPLTTKRVTGI-VSRGGSIMA 321



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>Q09863:YAFA_SCHPO Uncharacterized protein C29E6.10c - Schizosaccharomyces pombe|
           (Fission yeast)
          Length = 1085

 Score = 32.0 bits (71), Expect = 6.4
 Identities = 19/55 (34%), Positives = 29/55 (52%)
 Frame = +3

Query: 498 KETLDLEESRESKRRRVLEYPSEVNQPEVGDHKMGSSFVTSEVAESSLLCTDEPQ 662
           +E LD EE  E +RR +LE  SE  +  + + K+ + F  ++  E S  CT   Q
Sbjct: 708 REKLDKEEE-ERRRRELLEKESEEKERRLREAKIAAFFAPNQTKEGSDGCTTSSQ 761



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>Q920G3:SIGL5_MOUSE Sialic acid-binding Ig-like lectin 5 precursor - Mus musculus|
           (Mouse)
          Length = 569

 Score = 32.0 bits (71), Expect = 6.4
 Identities = 17/55 (30%), Positives = 29/55 (52%)
 Frame = +3

Query: 798 PSSQESVTYIGCQTDVPGTSEIAPVTESLIMQETRKLSTLKVSKGGSSMAKVKQN 962
           P  Q++ T + CQ ++PGT      T+ L +    +  T++VS G  +  KV Q+
Sbjct: 195 PRPQDNGTNLTCQVNLPGTGVTVERTQQLSVIYAPQKMTIRVSWGDDTGTKVLQS 249



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>Q92BB9:ARGB_LISIN Acetylglutamate kinase - Listeria innocua|
          Length = 250

 Score = 32.0 bits (71), Expect = 6.4
 Identities = 22/66 (33%), Positives = 30/66 (45%), Gaps = 11/66 (16%)
 Frame = +3

Query: 837  TDVPGTSEIAPVTESLIMQETRKLSTLKVSKGG-----SSMAKVKQN------VTTSIAY 983
            TDVPG    A + + +   E  KL T  + KGG     +S A   +N      +T S+  
Sbjct: 179  TDVPGVKNGAKIIDEIATDEINKLQTTDIIKGGMIPKLASAAFAAENGVGQVIITNSLEN 238

Query: 984  PFTLIK 1001
            P T IK
Sbjct: 239  PGTKIK 244



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>Q9SYJ2:GPAT3_ARATH Probable glycerol-3-phosphate acyltransferase 3 - Arabidopsis|
           thaliana (Mouse-ear cress)
          Length = 520

 Score = 32.0 bits (71), Expect = 6.5
 Identities = 15/47 (31%), Positives = 25/47 (53%)
 Frame = +1

Query: 712 LMEHPTSHQIINWKIILKELLSTTRLIKCLLARRALHTLVVKPMCQE 852
           +ME  T H ++  +++ KE L+T R+I       +LH  +    CQE
Sbjct: 182 IMEDKTKHDLVFDELVRKERLNTGRVIGITSFNTSLHRYLFSQFCQE 228



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>Q0V8R6:HEXA_BOVIN Beta-hexosaminidase alpha chain precursor - Bos taurus (Bovine)|
          Length = 529

 Score = 31.6 bits (70), Expect = 8.4
 Identities = 12/32 (37%), Positives = 22/32 (68%)
 Frame = -3

Query: 1085 QDFWRLLWRSMDALIYILESDISFFPRWFNKG 990
            + F +L+WRS +   Y+ ++DI  FPR+ ++G
Sbjct: 140  ETFSQLIWRSPEGTFYVNKTDIEDFPRFPHRG 171



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>P14776:DHSS_SYNP1 Soluble hydrogenase, small subunit - Synechococcus sp. (strain PCC|
           6716)
          Length = 384

 Score = 31.6 bits (70), Expect = 8.4
 Identities = 15/42 (35%), Positives = 23/42 (54%)
 Frame = +3

Query: 648 TDEPQSLNWNMQLNPDNFSSLSNGASYEPSDNQLENYSEGAT 773
           T E  S  W   LNPD+F ++ +G   +PS   +  +SE +T
Sbjct: 103 TTERISAPWGQPLNPDDFKAVLDGHRQKPSKAVIVTHSETST 144



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>Q5XX08:NCAP_EBOSU Nucleoprotein - Sudan ebolavirus (strain Uganda-00) (SEBOV) (Sudan|
           Ebola virus)
          Length = 738

 Score = 31.6 bits (70), Expect = 8.4
 Identities = 15/45 (33%), Positives = 27/45 (60%)
 Frame = +1

Query: 688 IQITSVPCLMEHPTSHQIINWKIILKELLSTTRLIKCLLARRALH 822
           IQ+ +   L+++PTS Q +   +++  L+ T  LIK LL  + +H
Sbjct: 176 IQVHAEQGLIQYPTSWQSVGHMMVIFRLMRTNFLIKFLLIHQGMH 220



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>Q9QP77:NCAP_EBOSB Nucleoprotein - Sudan ebolavirus (strain Boniface-76) (SEBOV)|
           (Sudan Ebola virus)
          Length = 738

 Score = 31.6 bits (70), Expect = 8.4
 Identities = 15/45 (33%), Positives = 27/45 (60%)
 Frame = +1

Query: 688 IQITSVPCLMEHPTSHQIINWKIILKELLSTTRLIKCLLARRALH 822
           IQ+ +   L+++PTS Q +   +++  L+ T  LIK LL  + +H
Sbjct: 176 IQVHAEQGLIQYPTSWQSVGHMMVIFRLMRTNFLIKFLLIHQGMH 220


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 229,590,531
Number of extensions: 4887550
Number of successful extensions: 12893
Number of sequences better than 10.0: 12
Number of HSP's gapped: 12833
Number of HSP's successfully gapped: 12
Length of query: 470
Length of database: 100,686,439
Length adjustment: 117
Effective length of query: 353
Effective length of database: 68,593,924
Effective search space: 24213655172
Effective search space used: 24213655172
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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