ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf131c08
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1Os01g0224300:Os01g0224300 77 1e-14
2AK099420:Os03g0729200 32 0.31
3AK067045:Os03g0729200 32 0.31
4Os03g0644200:Os03g0644200 30 2.0
5AK104878:Os09g0508900 29 3.4
6AK066022:Os09g0508900 29 3.4
7AK108611:Os02g0611000 28 4.4
8Os06g0578400:Os06g0578400 28 5.8
9Os03g0234500:Os03g0234500 28 5.8
10Os04g0464800:Os04g0464800 28 7.5
11AK068949:Os03g0195200 28 7.5
12AK067630:Os07g0463400 28 7.5
13Os06g0612500:Os06g0612500 27 9.8
14AK067341:Os10g0390100 27 9.8

>Os01g0224300:Os01g0224300 |
          Length = 70
 Score = 76.6 bits (187), Expect = 1e-14
 Identities = 38/63 (60%), Positives = 42/63 (66%)
 Frame = +1

Query: 256 TPRPVXXXXXXXXXXXXXXXPYDRDKCLSLLEALRGCIAQKKVKKFSLAEAGSTGATEAP 435
           TP+PV                YDRDKCL+ L+ALR CIAQKKVKKFSLAEA STG +E P
Sbjct: 8   TPKPVCAEEALALLNCAAESSYDRDKCLAALDALRACIAQKKVKKFSLAEASSTGTSETP 67

Query: 436 KGK 444
           KGK
Sbjct: 68  KGK 70



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>AK099420:Os03g0729200 |
          Length = 258

 Score = 32.3 bits (72), Expect = 0.31
 Identities = 22/67 (32%), Positives = 33/67 (49%), Gaps = 6/67 (8%)
 Frame = -1

Query: 251 ASFSMPIRSNPIQPTARGGDVARRKLLLPGDRGA----AS*FIPGSSAPATKQLPVWC-- 90
           AS S+P+    + P+AR     R  LL+PG RG      S   P ++A  +  +P     
Sbjct: 6   ASTSLPVPRVSLPPSARPAAAPRHGLLIPGRRGCFRLRGSPAAPAAAASGSPSVPSSSPE 65

Query: 89  AGGGLGE 69
           AG G+G+
Sbjct: 66  AGSGIGD 72



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>AK067045:Os03g0729200 |
          Length = 192

 Score = 32.3 bits (72), Expect = 0.31
 Identities = 22/67 (32%), Positives = 33/67 (49%), Gaps = 6/67 (8%)
 Frame = -1

Query: 251 ASFSMPIRSNPIQPTARGGDVARRKLLLPGDRGA----AS*FIPGSSAPATKQLPVWC-- 90
           AS S+P+    + P+AR     R  LL+PG RG      S   P ++A  +  +P     
Sbjct: 6   ASTSLPVPRVSLPPSARPAAAPRHGLLIPGRRGCFRLRGSPAAPAAAASGSPSVPSSSPE 65

Query: 89  AGGGLGE 69
           AG G+G+
Sbjct: 66  AGSGIGD 72



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>Os03g0644200:Os03g0644200 |
          Length = 616

 Score = 29.6 bits (65), Expect = 2.0
 Identities = 22/69 (31%), Positives = 30/69 (43%)
 Frame = -1

Query: 257 VLASFSMPIRSNPIQPTARGGDVARRKLLLPGDRGAAS*FIPGSSAPATKQLPVWCAGGG 78
           + AS   P R+N + PT RGG+ A R+ L      A S      S  A  +      GGG
Sbjct: 13  IQASSLPPFRTNSLSPTVRGGNAAPRRPL------ARSFSAKNRSPRARNRHAAAGDGGG 66

Query: 77  LGEKKENQR 51
            G  ++  R
Sbjct: 67  YGSPEQEGR 75



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>AK104878:Os09g0508900 |
          Length = 411

 Score = 28.9 bits (63), Expect = 3.4
 Identities = 16/37 (43%), Positives = 20/37 (54%)
 Frame = -2

Query: 130 GRRPRRPSSCRFGVPAAAWARRKKTSGAAAAVDGIQG 20
           G RPRRPSS     P A W        ++AAV+G+ G
Sbjct: 29  GGRPRRPSSFHAPQPRAGWRM------SSAAVNGLAG 59



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>AK066022:Os09g0508900 |
          Length = 413

 Score = 28.9 bits (63), Expect = 3.4
 Identities = 16/37 (43%), Positives = 20/37 (54%)
 Frame = -2

Query: 130 GRRPRRPSSCRFGVPAAAWARRKKTSGAAAAVDGIQG 20
           G RPRRPSS     P A W        ++AAV+G+ G
Sbjct: 31  GGRPRRPSSFHAPQPRAGWRM------SSAAVNGLAG 61



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>AK108611:Os02g0611000 |
          Length = 152

 Score = 28.5 bits (62), Expect = 4.4
 Identities = 18/33 (54%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
 Frame = -2

Query: 130 GRRPR-RPSSCRFGVPAAAWARRKKTSGAAAAV 35
           G RP  R S CR GVPA    RR   SG AAA+
Sbjct: 101 GFRPLGRHSRCRCGVPARVPPRRGLRSGNAAAI 133



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>Os06g0578400:Os06g0578400 |
          Length = 323

 Score = 28.1 bits (61), Expect = 5.8
 Identities = 15/34 (44%), Positives = 17/34 (50%)
 Frame = -2

Query: 130 GRRPRRPSSCRFGVPAAAWARRKKTSGAAAAVDG 29
           GR P   S C   VPAA   +R   +  AAA DG
Sbjct: 255 GRAPMAASGCPRPVPAATHRQRPGNAAPAAAPDG 288



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>Os03g0234500:Os03g0234500 |
          Length = 334

 Score = 28.1 bits (61), Expect = 5.8
 Identities = 15/38 (39%), Positives = 21/38 (55%)
 Frame = -1

Query: 197 GDVARRKLLLPGDRGAAS*FIPGSSAPATKQLPVWCAG 84
           G++ R + LL  D+G  S   PG +A  T  + VW AG
Sbjct: 260 GNLLRNRGLLQSDQGMLS--APGGAASTTAPIVVWFAG 295



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>Os04g0464800:Os04g0464800 |
          Length = 1012

 Score = 27.7 bits (60), Expect = 7.5
 Identities = 11/22 (50%), Positives = 12/22 (54%)
 Frame = -1

Query: 101 PVWCAGGGLGEKKENQRRRGGR 36
           P W  G G G     +RRRGGR
Sbjct: 103 PSWATGDGEGAAASRRRRRGGR 124



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>AK068949:Os03g0195200 |
          Length = 272

 Score = 27.7 bits (60), Expect = 7.5
 Identities = 16/32 (50%), Positives = 16/32 (50%)
 Frame = +2

Query: 35  NGRRGAAGFLSSRPSRRRHTKPAAAWSPGPTT 130
           N RRG     SS  S  R TK  AAW  GP T
Sbjct: 4   NRRRGRG---SSSSSSSRRTKQEAAWDDGPGT 32



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>AK067630:Os07g0463400 |
          Length = 361

 Score = 27.7 bits (60), Expect = 7.5
 Identities = 16/35 (45%), Positives = 18/35 (51%)
 Frame = -1

Query: 251 ASFSMPIRSNPIQPTARGGDVARRKLLLPGDRGAA 147
           AS S P+  +P  P  R G       LLPG RGAA
Sbjct: 13  ASPSSPLLPSPTSPDRRSGGGGGGGRLLPGLRGAA 47



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>Os06g0612500:Os06g0612500 |
          Length = 166

 Score = 27.3 bits (59), Expect = 9.8
 Identities = 15/42 (35%), Positives = 20/42 (47%)
 Frame = -2

Query: 133 QGRRPRRPSSCRFGVPAAAWARRKKTSGAAAAVDGIQGRIRK 8
           +GRR R    CR G   AA +      G AA   G +G +R+
Sbjct: 15  EGRRGRHDGGCRGGGRGAAGSGATGGGGLAAGARGRRGGLRR 56



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>AK067341:Os10g0390100 |
          Length = 839

 Score = 27.3 bits (59), Expect = 9.8
 Identities = 14/31 (45%), Positives = 20/31 (64%), Gaps = 2/31 (6%)
 Frame = +2

Query: 35  NGRRGAAGFLSSRPS--RRRHTKPAAAWSPG 121
           + +R + GFLS +PS  R++H KP A  S G
Sbjct: 757 SAKRKSPGFLSDKPSFKRQKHHKPNAGNSSG 787


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 21,022,832
Number of extensions: 519911
Number of successful extensions: 1883
Number of sequences better than 10.0: 14
Number of HSP's gapped: 1879
Number of HSP's successfully gapped: 14
Length of query: 227
Length of database: 15,399,855
Length adjustment: 97
Effective length of query: 130
Effective length of database: 11,515,878
Effective search space: 1497064140
Effective search space used: 1497064140
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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